BLASTX nr result

ID: Papaver30_contig00057474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00057474
         (474 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265318.1| PREDICTED: putative nuclear matrix constitue...    65   2e-08
ref|XP_010265312.1| PREDICTED: putative nuclear matrix constitue...    65   2e-08
ref|XP_010262517.1| PREDICTED: putative nuclear matrix constitue...    62   2e-07
ref|XP_010262510.1| PREDICTED: putative nuclear matrix constitue...    62   2e-07

>ref|XP_010265318.1| PREDICTED: putative nuclear matrix constituent protein 1-like protein
            isoform X2 [Nelumbo nucifera]
          Length = 1238

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
 Frame = -3

Query: 181  SLGRKRNHAQ---TTTSEQEEDDNDTCCESVTTGGCRKRRQTIHPELQTSGER 32
            S+GRKRNHA    TT SEQ+ DD++   +SVTTGG RKRRQT+ P +QT GE+
Sbjct: 1020 SMGRKRNHAHASITTVSEQDADDSEVRSDSVTTGGRRKRRQTVAPAMQTPGEK 1072


>ref|XP_010265312.1| PREDICTED: putative nuclear matrix constituent protein 1-like protein
            isoform X1 [Nelumbo nucifera]
            gi|720029758|ref|XP_010265313.1| PREDICTED: putative
            nuclear matrix constituent protein 1-like protein isoform
            X1 [Nelumbo nucifera] gi|720029761|ref|XP_010265315.1|
            PREDICTED: putative nuclear matrix constituent protein
            1-like protein isoform X1 [Nelumbo nucifera]
            gi|720029764|ref|XP_010265316.1| PREDICTED: putative
            nuclear matrix constituent protein 1-like protein isoform
            X1 [Nelumbo nucifera] gi|720029767|ref|XP_010265317.1|
            PREDICTED: putative nuclear matrix constituent protein
            1-like protein isoform X1 [Nelumbo nucifera]
          Length = 1239

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 32/53 (60%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
 Frame = -3

Query: 181  SLGRKRNHAQ---TTTSEQEEDDNDTCCESVTTGGCRKRRQTIHPELQTSGER 32
            S+GRKRNHA    TT SEQ+ DD++   +SVTTGG RKRRQT+ P +QT GE+
Sbjct: 1020 SMGRKRNHAHASITTVSEQDADDSEVRSDSVTTGGRRKRRQTVAPAMQTPGEK 1072


>ref|XP_010262517.1| PREDICTED: putative nuclear matrix constituent protein 1-like protein
            isoform X2 [Nelumbo nucifera]
          Length = 1245

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
 Frame = -3

Query: 286  KGCQPSKGVQIFFPGVTPELLEESSQFEENQRETTSLGRKRNHAQ---TTTSEQEEDDND 116
            K  QP+   Q   P    E +   ++  +      S+GRKRNHA    TT SEQ+ +D++
Sbjct: 1000 KNAQPNGNAQ---PNGNTEDISNLNEESQGDYGVASMGRKRNHAHVSVTTVSEQDANDSE 1056

Query: 115  TCCESVTTGGCRKRRQTIHPELQTSGER 32
               +SVTTGG RKRRQ + P +Q  GE+
Sbjct: 1057 VHSDSVTTGGRRKRRQIVAPAMQKPGEK 1084


>ref|XP_010262510.1| PREDICTED: putative nuclear matrix constituent protein 1-like protein
            isoform X1 [Nelumbo nucifera]
          Length = 1246

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
 Frame = -3

Query: 286  KGCQPSKGVQIFFPGVTPELLEESSQFEENQRETTSLGRKRNHAQ---TTTSEQEEDDND 116
            K  QP+   Q   P    E +   ++  +      S+GRKRNHA    TT SEQ+ +D++
Sbjct: 1000 KNAQPNGNAQ---PNGNTEDISNLNEESQGDYGVASMGRKRNHAHVSVTTVSEQDANDSE 1056

Query: 115  TCCESVTTGGCRKRRQTIHPELQTSGER 32
               +SVTTGG RKRRQ + P +Q  GE+
Sbjct: 1057 VHSDSVTTGGRRKRRQIVAPAMQKPGEK 1084


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