BLASTX nr result

ID: Papaver30_contig00057252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00057252
         (489 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010276650.1| PREDICTED: pentatricopeptide repeat-containi...    92   2e-16
ref|XP_009384372.1| PREDICTED: pentatricopeptide repeat-containi...    80   5e-13
ref|XP_010926974.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-11
ref|XP_006854337.1| PREDICTED: pentatricopeptide repeat-containi...    63   8e-08
ref|XP_009395862.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
ref|XP_008379311.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_008671056.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06
ref|XP_008666901.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06

>ref|XP_010276650.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Nelumbo nucifera]
          Length = 765

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 61/165 (36%), Positives = 87/165 (52%), Gaps = 7/165 (4%)
 Frame = -2

Query: 488 NLLSCSCSSTPVLIFSSKQKHLVKYSLSTKPTAS-------LPSINTQTNNFFASYAKSK 330
           ++L CS SS      S+K   L  +  S  P AS       L SI T++N   +SY+K+K
Sbjct: 2   DMLICSSSSP-----SAKIPLLSHHPTSKLPPASTQPGHCNLRSITTRSNILLSSYSKTK 56

Query: 329 XXXXXXXXXXXXXXXXXXTWNTLLSACLNQSQFTTTINLFFQMITSGASLVPDILTFRWV 150
                             TWNT+++AC  Q  +   + LF  MI S  S  PD LTFR+V
Sbjct: 57  TLDQTLKLFRLLPDRDTVTWNTVIAACSRQGCYMAALQLFVDMIRS--SQPPDNLTFRFV 114

Query: 149 LRACSETKSYSLAFQIHAYMTKLYGPCSPDLVTNTCLINIYSEFG 15
           L+AC+E ++Y LA QIHA++ KL G    D + +TCL+ ++ E G
Sbjct: 115 LKACAEAENYPLALQIHAFLLKLQG-LQLDPIVDTCLVKLFCELG 158


>ref|XP_009384372.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Musa acuminata subsp. malaccensis]
          Length = 608

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = -2

Query: 395 TASLPSINTQTNNFFASYAKSKXXXXXXXXXXXXXXXXXXTWNTLLSACLNQSQFTTTIN 216
           T    S+ T+TN FF+S AKSK                  TWNT +SACL   +    + 
Sbjct: 28  TGRSTSLATRTNIFFSSAAKSKPIDHVLKLFHLLPARDTVTWNTAISACLRHCRVDAALR 87

Query: 215 LFFQMITSGASLVPDILTFRWVLRACSETKSYSLAFQIHAYMTKLYGPCSPDLVT--NTC 42
           LF  M+ + +S  PD +T R VLRA SE     L  QIHAY+ KL     P  +T  +TC
Sbjct: 88  LFVDMLLA-SSPAPDAITIRLVLRAFSEANDSRLLPQIHAYVLKLQEQLPPSELTVLHTC 146

Query: 41  LINIYSEFG 15
           L+N Y +FG
Sbjct: 147 LLNSYRKFG 155


>ref|XP_010926974.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Elaeis guineensis]
          Length = 781

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
 Frame = -2

Query: 407 STKPTASLPSINTQTNNFFASYAKSKXXXXXXXXXXXXXXXXXXTWNTLLSACLNQSQFT 228
           ++ P++    +  +TN FF+S AKS                   TWNT +SA L   +  
Sbjct: 39  NSSPSSQTTPLTIRTNLFFSSVAKSHPLDRTLQLFHLLPARDTVTWNTAISATLRHGRPD 98

Query: 227 TTINLFFQMITSGASLVPDILTFRWVLRACSETKSYSLAFQIHAYMTKLYGPCSPD--LV 54
            T+ LF  M+ S +S  P  +T R VL+A SE+ +  L  Q+HA++ KL    S     V
Sbjct: 99  ATLRLFLDMLLSSSS-APCAITIRLVLKAISESNNSELLPQMHAFVFKLQDLLSSSELTV 157

Query: 53  TNTCLINIYSEFGSTK 6
           +NTCL+N+Y +FG T+
Sbjct: 158 SNTCLLNLYHKFGFTE 173


>ref|XP_006854337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Amborella trichopoda]
           gi|548858013|gb|ERN15804.1| hypothetical protein
           AMTR_s00039p00132380 [Amborella trichopoda]
          Length = 705

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 27/86 (31%), Positives = 49/86 (56%)
 Frame = -2

Query: 272 WNTLLSACLNQSQFTTTINLFFQMITSGASLVPDILTFRWVLRACSETKSYSLAFQIHAY 93
           WN+++  C    +    I+++ +M+ SG S  PD LT+  VL+AC++   +    +IH  
Sbjct: 119 WNSMIRGCCINGRLEEMIDIYSEMMNSGVS--PDKLTYNLVLKACTDLSDFEYGLRIHDQ 176

Query: 92  MTKLYGPCSPDLVTNTCLINIYSEFG 15
           + +    C  D++  T L+N+YS+FG
Sbjct: 177 IVQRSSECEVDVLVGTSLVNMYSKFG 202


>ref|XP_009395862.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
           [Musa acuminata subsp. malaccensis]
          Length = 841

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 33/114 (28%), Positives = 57/114 (50%)
 Frame = -2

Query: 362 NNFFASYAKSKXXXXXXXXXXXXXXXXXXTWNTLLSACLNQSQFTTTINLFFQMITSGAS 183
           N   A YA++                   +WN+L+S CL        INLF QM+ +G  
Sbjct: 70  NAMIAGYARNGSVDVAKSLFDRMPERDVISWNSLMSGCLQNGGLYEPINLFIQMLWNG-- 127

Query: 182 LVPDILTFRWVLRACSETKSYSLAFQIHAYMTKLYGPCSPDLVTNTCLINIYSE 21
           +VPD  TF  +L++C+  +  ++  QIH  + K+      D+VT + L+++Y++
Sbjct: 128 IVPDRTTFAVILKSCAALEELNMGIQIHGAVVKM--GLHFDVVTGSALVDMYAK 179


>ref|XP_008379311.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Malus domestica]
          Length = 510

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 33/87 (37%), Positives = 45/87 (51%)
 Frame = -2

Query: 272 WNTLLSACLNQSQFTTTINLFFQMITSGASLVPDILTFRWVLRACSETKSYSLAFQIHAY 93
           WNT++   LN   +T  I+LF++M      + PD LT    L ACS   S      IH Y
Sbjct: 217 WNTMVMGYLNNQLYTKAIDLFYRM--KAGDIKPDYLTLTGTLSACSHLGSLETGVNIHIY 274

Query: 92  MTKLYGPCSPDLVTNTCLINIYSEFGS 12
             KL    SP +V  T LI++Y++ GS
Sbjct: 275 AEKLEQASSPHVV--TALIDMYAKCGS 299


>ref|XP_008671056.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Zea mays]
          Length = 307

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
 Frame = -2

Query: 272 WNTLLSACLNQSQFTTTINLFFQMITSGASLVPDILTFRWVLRACSETKSYSLAFQIHAY 93
           WNT + A          ++LF +M  +   L PD  T + VL AC+ T + SL F  HA 
Sbjct: 75  WNTAVDALAGNGDHLAALDLFQEMQRNMPDLAPDAYTVQSVLGACAATGALSLGFYAHAL 134

Query: 92  MTKLYGPCSP---DLVTNTCLINIYSEFGSTK 6
           + ++ G  SP   D++ N  L+++Y + G+ +
Sbjct: 135 LLRVLGGASPVSRDVLINNSLVDLYGKCGAVE 166


>ref|XP_008666901.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Zea mays]
          Length = 271

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
 Frame = -2

Query: 272 WNTLLSACLNQSQFTTTINLFFQMITSGASLVPDILTFRWVLRACSETKSYSLAFQIHAY 93
           WNT + A          ++LF +M  +   L PD  T + VL AC+ T + SL F  HA 
Sbjct: 39  WNTAVDALAGNGDHLAALDLFQEMQRNMPDLAPDAYTVQSVLGACAATGALSLGFYAHAL 98

Query: 92  MTKLYGPCSP---DLVTNTCLINIYSEFGSTK 6
           + ++ G  SP   D++ N  L+++Y + G+ +
Sbjct: 99  LLRVLGGASPVSRDVLINNSLVDLYGKCGAVE 130


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