BLASTX nr result
ID: Papaver30_contig00057198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00057198
(924 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopan... 77 2e-11
ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassai... 77 2e-11
ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassai... 77 2e-11
ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapan... 76 3e-11
ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapan... 76 3e-11
ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopan... 76 4e-11
gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinque... 69 5e-09
gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlise... 65 8e-09
gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sin... 67 2e-08
gb|AKJ77552.1| ribosomal protein S12 (chloroplast) [Dioscorea ni... 65 7e-08
gb|AKJ77464.1| ribosomal protein S12 (chloroplast) [Carthamus ti... 65 1e-07
ref|YP_358603.1| hypothetical protein PhapfoPp054 [Phalaenopsis ... 63 3e-07
gb|AKJ77627.1| ribosomal protein S12 (chloroplast) [Fagopyrum cy... 60 2e-06
gb|AFK38361.1| unknown [Medicago truncatula] 40 5e-06
ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberi... 58 9e-06
>ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599659|gb|AGG39351.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 143
Score = 77.0 bits (188), Expect = 2e-11
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNWNKRKETFLTVSMIGTNE*EWKNPISLLKK 751
TKSPALRGCPQRRGTCTRVYVRLVQIM+W+KRK+TF I K P S L+K
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKKTFFQYQTITP-----KKPNSALRK 71
>ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603148|ref|YP_008815141.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940339|ref|YP_008814880.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599150|gb|AGG39016.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599252|gb|AGG39103.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599584|gb|AGG39277.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 149
Score = 76.6 bits (187), Expect = 2e-11
Identities = 40/62 (64%), Positives = 47/62 (75%), Gaps = 4/62 (6%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNWNKRKETFLTVS----MIGTNE*EWKNPISLL 757
TKSPALRGCPQRRGTCTRVYVRLVQIM+W+KRK+TF +++ IG K P S L
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKKTFSSINDPYRRIGITP---KKPNSAL 75
Query: 756 KK 751
+K
Sbjct: 76 RK 77
>ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603135|ref|YP_008815096.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940326|ref|YP_008814835.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599137|gb|AGG39003.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599239|gb|AGG39090.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599571|gb|AGG39264.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 150
Score = 76.6 bits (187), Expect = 2e-11
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 4/62 (6%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNWNKRKETFLTVS----MIGTNE*EWKNPISLL 757
TKSPALRGCPQRRGTCTRVYVRLVQIM+W+KRK+TF +++ IGT K P S L
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKKTFSSINDPYRRIGTI--TPKKPNSAL 76
Query: 756 KK 751
+K
Sbjct: 77 RK 78
>ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599431|gb|AGG39190.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 161
Score = 76.3 bits (186), Expect = 3e-11
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNWNKRKETFLTVS 805
TKSPALRGCPQRRGTCTRVYVRLVQIM+W+KRK+TF +++
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKKTFSSIN 58
>ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599418|gb|AGG39177.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 165
Score = 76.3 bits (186), Expect = 3e-11
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNWNKRKETFLTVS 805
TKSPALRGCPQRRGTCTRVYVRLVQIM+W+KRK+TF +++
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKKTFSSIN 58
>ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599672|gb|AGG39364.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 142
Score = 75.9 bits (185), Expect = 4e-11
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNWNKRKETFLTVSMIGTNE*EWKNPISLLKK 751
TKSPALRGCPQRRGTCTRVYVRLVQIM+W+KRK+TF + K P S L+K
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKKTFFQYQITP------KKPNSALRK 70
>gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinquefolius]
Length = 65
Score = 68.9 bits (167), Expect = 5e-09
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = -1
Query: 921 KSPALRGCPQRRGTCTRVYVRLVQIMNWNKRKETFLTVS 805
KSPALRGCPQRRGTCTR YV LVQIM+W+KRK+TF +++
Sbjct: 20 KSPALRGCPQRRGTCTRGYVGLVQIMSWDKRKKTFSSIN 58
>gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlisea aurea]
Length = 106
Score = 65.1 bits (157), Expect(2) = 8e-09
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = +1
Query: 823 LLSFVPVHDLNESHIHPSTCSSTLRTSPKGGGF 921
L+ FV HDLNESHIHPSTCSSTLRTSPKGGGF
Sbjct: 50 LVFFVSAHDLNESHIHPSTCSSTLRTSPKGGGF 82
Score = 23.5 bits (49), Expect(2) = 8e-09
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 701 IGFIPKETINFIH 739
IGF P +TI FIH
Sbjct: 1 IGFAPMKTIRFIH 13
>gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sinensis]
Length = 60
Score = 67.0 bits (162), Expect = 2e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNWNKRKE 823
TKSPAL GCPQRRGTCTRVYVRLVQIM W+K KE
Sbjct: 19 TKSPALGGCPQRRGTCTRVYVRLVQIMGWDKTKE 52
>gb|AKJ77552.1| ribosomal protein S12 (chloroplast) [Dioscorea nipponica]
gi|827346399|gb|AKJ77596.1| ribosomal protein S12
(chloroplast) [Dioscorea nipponica]
Length = 141
Score = 65.1 bits (157), Expect = 7e-08
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNWNK 832
TKSPALRGCPQRRGTCTRVYVRLVQIMN NK
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVQIMNSNK 49
>gb|AKJ77464.1| ribosomal protein S12 (chloroplast) [Carthamus tinctorius]
Length = 138
Score = 64.7 bits (156), Expect = 1e-07
Identities = 35/58 (60%), Positives = 39/58 (67%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNWNKRKETFLTVSMIGTNE*EWKNPISLLKK 751
TKSPALRGCPQRRGTCTRVYVRLVQIMN + + + S I K P S L+K
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVQIMNSGSKGDLSVNFSTITP-----KKPNSALRK 71
>ref|YP_358603.1| hypothetical protein PhapfoPp054 [Phalaenopsis aphrodite subsp.
formosana] gi|58802840|gb|AAW82560.1| hypothetical
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 99
Score = 63.2 bits (152), Expect = 3e-07
Identities = 50/108 (46%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Frame = -1
Query: 486 MGRAKECELYKLLN-----R*EAPVYRKDLTV*TVTIETMEPTI--SRFLFTFLIPSINK 328
MGRAKECELYK + EAPVYR+DLTV V IET +PTI S FLI N
Sbjct: 1 MGRAKECELYKFTRNFDEMKEEAPVYREDLTVSEVAIETRKPTILSSLVAVEFLISRRNT 60
Query: 327 IS*FRDKMK*LXXXXXXXXXXXXXXXIFILYIGRISFVINRLGGEKND 184
+ ++K+ I+ILYIGRI FVINR EK+D
Sbjct: 61 LK--KEKI------VVGKVIVAKAIGIYILYIGRIRFVINR-PEEKDD 99
>gb|AKJ77627.1| ribosomal protein S12 (chloroplast) [Fagopyrum cymosum]
gi|827346480|gb|AKJ77672.1| ribosomal protein S12
(chloroplast) [Fagopyrum cymosum]
Length = 118
Score = 60.1 bits (144), Expect = 2e-06
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIMNW 838
TKSPALRGCPQRRGTCTRVYVRLV M+W
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVHSMSW 47
>gb|AFK38361.1| unknown [Medicago truncatula]
Length = 82
Score = 40.0 bits (92), Expect(3) = 5e-06
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = -3
Query: 613 ERLCSHSCKNGLTGSAT*PTFIMKCRYCMGGSSCEK--THYWI 491
++LC C NGL GS T FI+K RYC+ CE+ T Y++
Sbjct: 23 KKLCPKFCNNGLRGSTTQLIFILKYRYCIARFCCERPITRYFM 65
Score = 32.3 bits (72), Expect(3) = 5e-06
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1
Query: 510 KRPITG*FMGRAKECELYK 454
+RPIT FMGRA +CELYK
Sbjct: 57 ERPITRYFMGRAHKCELYK 75
Score = 25.8 bits (55), Expect(3) = 5e-06
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 686 MRSNSPLVANGYPLSG 639
M++ PLV N YPLSG
Sbjct: 1 MKNTFPLVTNSYPLSG 16
>ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberis bealei]
gi|536462705|gb|AGU37070.1| ribosomal protein S12
(chloroplast) [Berberis bealei]
Length = 46
Score = 58.2 bits (139), Expect = 9e-06
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -1
Query: 924 TKSPALRGCPQRRGTCTRVYVRLVQIM 844
TKSPALRGCPQRRGTCTRVYVRLVQI+
Sbjct: 19 TKSPALRGCPQRRGTCTRVYVRLVQII 45