BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00056783
         (460 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009126876.1| PREDICTED: putative ribonuclease H protein A...    58   3e-06

>ref|XP_009126876.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 564

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
 Frame = -3

Query: 431 CPQCSSSPETSSHILLHCQTTIDSRNLLLAHLTNNQNPTHNIPTSLPHQTTVSLLLKTKA 252
           CP+C    ET+ H++LHC+   ++          N   T    TS  +    ++L+  K 
Sbjct: 350 CPRCGER-ETAEHLILHCRFAQET--------WTNAPFTKRFDTSSLNSLNDAILIGMKL 400

Query: 251 ----PAPVTTS-FCFLLWSLWIARNDVVYRQQLPNSTNITQMATKLQQEYIWAQYHLPPV 87
               P  VTTS F ++ W LW ARN +V+  ++ +ST +   A K  +E++ AQ  + P 
Sbjct: 401 VCLPPTGVTTSAFLWICWGLWTARNKLVFENRVISSTEVVSSAIKNAREWLVAQPSISPP 460

Query: 86  LPGMQPYPNPAQTTLATTTIF 24
           L      PN   T     + F
Sbjct: 461 LTLTGQGPNIVTTRSECVSCF 481