BLASTX nr result
ID: Papaver30_contig00056690
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00056690
(1256 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus ... 48 1e-08
ref|XP_014495462.1| PREDICTED: sm-like protein LSM2 [Vigna radia... 48 2e-08
ref|XP_012092296.1| PREDICTED: sm-like protein LSM2 [Jatropha cu... 48 2e-08
ref|XP_010652110.1| PREDICTED: U6 snRNA-associated Sm-like prote... 48 2e-08
emb|CBI32330.3| unnamed protein product [Vitis vinifera] 48 2e-08
ref|XP_003625831.1| u6 snRNA-associated-like-Smprotein [Medicago... 48 2e-08
ref|XP_007162394.1| hypothetical protein PHAVU_001G148500g [Phas... 48 2e-08
ref|XP_004493646.1| PREDICTED: sm-like protein LSM2 [Cicer ariet... 48 2e-08
ref|XP_002304049.1| small nuclear ribonucleoprotein D [Populus t... 48 2e-08
ref|XP_007050686.1| BTB-POZ and MATH domain 2 [Theobroma cacao] ... 48 3e-08
ref|XP_010522691.1| PREDICTED: U6 snRNA-associated Sm-like prote... 48 4e-08
ref|XP_010278777.1| PREDICTED: U6 snRNA-associated Sm-like prote... 48 4e-08
ref|XP_009111156.1| PREDICTED: U6 snRNA-associated Sm-like prote... 48 4e-08
emb|CDX86679.1| BnaC08g00240D [Brassica napus] 48 4e-08
emb|CDX89900.1| BnaA10g01820D [Brassica napus] 48 4e-08
emb|CDY15459.1| BnaA08g27430D [Brassica napus] 48 4e-08
ref|XP_008461281.1| PREDICTED: U6 snRNA-associated Sm-like prote... 48 4e-08
ref|XP_013449697.1| u6 snRNA-associated-like-Smprotein [Medicago... 48 4e-08
ref|XP_010038129.1| PREDICTED: U6 snRNA-associated Sm-like prote... 48 4e-08
ref|XP_006444137.1| hypothetical protein CICLE_v10023059mg [Citr... 48 4e-08
>ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus communis]
gi|223535995|gb|EEF37654.1| Speckle-type POZ protein,
putative [Ricinus communis]
Length = 500
Score = 47.8 bits (112), Expect(3) = 1e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 412 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 450
Score = 32.0 bits (71), Expect(3) = 1e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 464 VRNCFIRGSVVRYVQLPPEGV 484
Score = 27.7 bits (60), Expect(3) = 1e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 452 VVDQDKYPHMLSVR 465
>ref|XP_014495462.1| PREDICTED: sm-like protein LSM2 [Vigna radiata var. radiata]
Length = 93
Score = 47.8 bits (112), Expect(3) = 2e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 32.0 bits (71), Expect(3) = 2e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 57 VRNCFIRGSVVRYVQLPPEGV 77
Score = 27.7 bits (60), Expect(3) = 2e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKYPHMLSVR 58
>ref|XP_012092296.1| PREDICTED: sm-like protein LSM2 [Jatropha curcas]
Length = 93
Score = 47.8 bits (112), Expect(3) = 2e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 32.0 bits (71), Expect(3) = 2e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 57 VRNCFIRGSVVRYVQLPPEGV 77
Score = 27.7 bits (60), Expect(3) = 2e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKYPHMLSVR 58
>ref|XP_010652110.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Vitis
vinifera]
Length = 126
Score = 47.8 bits (112), Expect(3) = 2e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 38 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 76
Score = 32.0 bits (71), Expect(3) = 2e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 90 VRNCFIRGSVVRYVQLPPEGV 110
Score = 27.7 bits (60), Expect(3) = 2e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 78 VVDQDKYPHMLSVR 91
>emb|CBI32330.3| unnamed protein product [Vitis vinifera]
Length = 137
Score = 47.8 bits (112), Expect(3) = 2e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 49 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 87
Score = 32.0 bits (71), Expect(3) = 2e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 101 VRNCFIRGSVVRYVQLPPEGV 121
Score = 27.7 bits (60), Expect(3) = 2e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 89 VVDQDKYPHMLSVR 102
>ref|XP_003625831.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gi|355500846|gb|AES82049.1| u6
snRNA-associated-like-Smprotein [Medicago truncatula]
gi|388519597|gb|AFK47860.1| unknown [Lotus japonicus]
gi|728844373|gb|KHG23816.1| U6 snRNA-associated Sm-like
protein LSm2 [Gossypium arboreum]
Length = 93
Score = 47.8 bits (112), Expect(3) = 2e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 32.0 bits (71), Expect(3) = 2e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 57 VRNCFIRGSVVRYVQLPPEGV 77
Score = 27.7 bits (60), Expect(3) = 2e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKYPHMLSVR 58
>ref|XP_007162394.1| hypothetical protein PHAVU_001G148500g [Phaseolus vulgaris]
gi|561035858|gb|ESW34388.1| hypothetical protein
PHAVU_001G148500g [Phaseolus vulgaris]
Length = 125
Score = 47.8 bits (112), Expect(3) = 2e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 37 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 75
Score = 32.0 bits (71), Expect(3) = 2e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 89 VRNCFIRGSVVRYVQLPPEGV 109
Score = 27.7 bits (60), Expect(3) = 2e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 77 VVDQDKYPHMLSVR 90
>ref|XP_004493646.1| PREDICTED: sm-like protein LSM2 [Cicer arietinum]
gi|747066248|ref|XP_011079802.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2 [Sesamum indicum]
gi|828300186|ref|XP_012569299.1| PREDICTED: sm-like
protein LSM2 [Cicer arietinum]
gi|848850144|ref|XP_012832661.1| PREDICTED: sm-like
protein LSM2 [Erythranthe guttatus]
gi|604348467|gb|EYU46622.1| hypothetical protein
MIMGU_mgv1a017110mg [Erythranthe guttata]
Length = 93
Score = 47.8 bits (112), Expect(3) = 2e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 32.0 bits (71), Expect(3) = 2e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 57 VRNCFIRGSVVRYVQLPPEGV 77
Score = 27.7 bits (60), Expect(3) = 2e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKYPHMLSVR 58
>ref|XP_002304049.1| small nuclear ribonucleoprotein D [Populus trichocarpa]
gi|743848741|ref|XP_011028302.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2 isoform X1
[Populus euphratica] gi|743848745|ref|XP_011028303.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm2
isoform X2 [Populus euphratica]
gi|743927394|ref|XP_011007870.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2 [Populus
euphratica] gi|118484877|gb|ABK94305.1| unknown [Populus
trichocarpa] gi|222841481|gb|EEE79028.1| small nuclear
ribonucleoprotein D [Populus trichocarpa]
Length = 93
Score = 47.8 bits (112), Expect(3) = 2e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 32.0 bits (71), Expect(3) = 2e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 57 VRNCFIRGSVVRYVQLPPEGV 77
Score = 27.7 bits (60), Expect(3) = 2e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKYPHMLSVR 58
>ref|XP_007050686.1| BTB-POZ and MATH domain 2 [Theobroma cacao]
gi|508702947|gb|EOX94843.1| BTB-POZ and MATH domain 2
[Theobroma cacao]
Length = 493
Score = 47.8 bits (112), Expect(3) = 3e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 405 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 443
Score = 30.8 bits (68), Expect(3) = 3e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 457 VRNCFIRGSVVRYVQLPPDGV 477
Score = 27.7 bits (60), Expect(3) = 3e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 445 VVDQDKYPHMLSVR 458
>ref|XP_010522691.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Tarenaya
hassleriana]
Length = 93
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 57 VRNCFIRGSVVRYVQLPPDGV 77
Score = 27.7 bits (60), Expect(3) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKFPHMLSVR 58
>ref|XP_010278777.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Nelumbo
nucifera]
Length = 93
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 57 VRNCFIRGSVVRYVQLPPDGV 77
Score = 27.7 bits (60), Expect(3) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKYPHMLSVR 58
>ref|XP_009111156.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Brassica rapa]
gi|922554678|ref|XP_013605391.1| PREDICTED: sm-like
protein LSM2 [Brassica oleracea var. oleracea]
gi|923602780|ref|XP_013741645.1| PREDICTED: sm-like
protein LSM2 [Brassica napus]
gi|923824239|ref|XP_013695356.1| PREDICTED: sm-like
protein LSM2 [Brassica napus]
gi|923829866|ref|XP_013697150.1| PREDICTED: sm-like
protein LSM2 [Brassica napus]
Length = 93
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 57 VRNCFIRGSVVRYVQLPPDGV 77
Score = 27.7 bits (60), Expect(3) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKFPHMLSVR 58
>emb|CDX86679.1| BnaC08g00240D [Brassica napus]
Length = 124
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 36 SYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENT 74
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 88 VRNCFIRGSVVRYVQLPPDGV 108
Score = 27.7 bits (60), Expect(3) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 76 VVDQDKFPHMLSVR 89
>emb|CDX89900.1| BnaA10g01820D [Brassica napus]
Length = 106
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 18 SYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENT 56
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 70 VRNCFIRGSVVRYVQLPPDGV 90
Score = 27.7 bits (60), Expect(3) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 58 VVDQDKYPHMLSVR 71
>emb|CDY15459.1| BnaA08g27430D [Brassica napus]
Length = 129
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 41 SYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENT 79
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 93 VRNCFIRGSVVRYVQLPPDGV 113
Score = 27.7 bits (60), Expect(3) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 81 VVDQDKFPHMLSVR 94
>ref|XP_008461281.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Cucumis melo]
Length = 93
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 57 VRNCFIRGSVVRYVQLPPDGV 77
Score = 27.7 bits (60), Expect(3) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKYPHMLSVR 58
>ref|XP_013449697.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
gi|657379345|gb|KEH23725.1| u6
snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 93
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 32.0 bits (71), Expect(3) = 4e-08
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL PEGV
Sbjct: 57 VRNCFIRGSVVRYVQLPPEGV 77
Score = 26.6 bits (57), Expect(3) = 4e-08
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ++ PHMLSVR
Sbjct: 45 VVDQDRYPHMLSVR 58
>ref|XP_010038129.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Eucalyptus
grandis] gi|823148095|ref|XP_012473956.1| PREDICTED:
sm-like protein LSM2 [Gossypium raimondii]
gi|629083496|gb|KCW49941.1| hypothetical protein
EUGRSUZ_K03403 [Eucalyptus grandis]
gi|728827574|gb|KHG07251.1| U6 snRNA-associated Sm-like
protein LSm2 [Gossypium arboreum]
gi|763754140|gb|KJB21471.1| hypothetical protein
B456_004G083500 [Gossypium raimondii]
Length = 93
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 57 VRNCFIRGSVVRYVQLPPDGV 77
Score = 27.7 bits (60), Expect(3) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKYPHMLSVR 58
>ref|XP_006444137.1| hypothetical protein CICLE_v10023059mg [Citrus clementina]
gi|568852209|ref|XP_006479772.1| PREDICTED: U6
snRNA-associated Sm-like protein LSm2-like [Citrus
sinensis] gi|557546399|gb|ESR57377.1| hypothetical
protein CICLE_v10023059mg [Citrus clementina]
gi|641849947|gb|KDO68821.1| hypothetical protein
CISIN_1g034490mg [Citrus sinensis]
Length = 93
Score = 47.8 bits (112), Expect(3) = 4e-08
Identities = 26/39 (66%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Frame = -3
Query: 813 SFF*DSVGNNVTVGVKNDLAITGTLHSVDHY----LENT 709
S+F D VG VTV +KNDLAI GTLHSVD Y LENT
Sbjct: 5 SYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENT 43
Score = 30.8 bits (68), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = -2
Query: 688 ILTCFQ*GSVVRYVQLLPEGV 626
+ CF GSVVRYVQL P+GV
Sbjct: 57 VRNCFIRGSVVRYVQLPPDGV 77
Score = 27.7 bits (60), Expect(3) = 4e-08
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 707 VVDQEKDPHMLSVR 666
VVDQ+K PHMLSVR
Sbjct: 45 VVDQDKYPHMLSVR 58