BLASTX nr result
ID: Papaver30_contig00055579
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00055579
(820 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010249335.1| PREDICTED: retinoblastoma-related protein-li... 86 1e-14
ref|XP_008810623.1| PREDICTED: retinoblastoma-related protein [P... 87 2e-14
sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related prote... 86 4e-14
ref|XP_010908927.1| PREDICTED: retinoblastoma-related protein is... 85 7e-14
ref|XP_010908926.1| PREDICTED: retinoblastoma-related protein is... 85 7e-14
ref|XP_008676706.1| PREDICTED: uncharacterized protein LOC100217... 84 9e-14
ref|XP_008676705.1| PREDICTED: uncharacterized protein LOC100217... 84 9e-14
ref|XP_008676703.1| PREDICTED: uncharacterized protein LOC100217... 84 9e-14
ref|XP_008676704.1| PREDICTED: uncharacterized protein LOC100217... 84 9e-14
ref|XP_006340923.1| PREDICTED: retinoblastoma-related protein 1-... 81 3e-13
ref|XP_010250475.1| PREDICTED: retinoblastoma-related protein-li... 81 4e-13
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm... 81 4e-13
ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein [F... 80 6e-13
ref|NP_001266162.1| retinoblastoma-related protein 1 [Solanum ly... 80 9e-13
ref|XP_009774790.1| PREDICTED: retinoblastoma-related protein 1 ... 79 2e-12
ref|XP_009774791.1| PREDICTED: retinoblastoma-related protein 1 ... 79 2e-12
sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related prot... 79 2e-12
ref|XP_009774792.1| PREDICTED: retinoblastoma-related protein 1 ... 79 2e-12
ref|XP_009774793.1| PREDICTED: retinoblastoma-related protein 1 ... 79 2e-12
ref|XP_009774794.1| PREDICTED: retinoblastoma-related protein 1 ... 79 2e-12
>ref|XP_010249335.1| PREDICTED: retinoblastoma-related protein-like [Nelumbo nucifera]
Length = 1030
Score = 86.3 bits (212), Expect(2) = 1e-14
Identities = 41/54 (75%), Positives = 45/54 (83%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP 242
VWEKGSS+YNSL ARPS SAE R+GLL E MPSLDAIAMHN+IS GG PP+P
Sbjct: 613 VWEKGSSMYNSLIVARPSLSAEINRMGLLAEPMPSLDAIAMHNNISCGGLPPMP 666
Score = 21.6 bits (44), Expect(2) = 1e-14
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 587 IRHEESLPRE 596
Score = 74.7 bits (182), Expect = 7e-11
Identities = 67/186 (36%), Positives = 85/186 (45%), Gaps = 27/186 (14%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAP---------RCTTH*PLRGLPLLQNFIA*DY*W 171
S RELRRHL SLEE LL S +K R + + + LL
Sbjct: 592 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIVARPSLSAEINRMGLL---------- 641
Query: 172 KPCHPWTQLPCIIV---FPMEAFHHYPSINKLKTAKGQNGEM------------IPIERN 306
P L I + PS+ K +T GQNG++ + +ERN
Sbjct: 642 --AEPMPSLDAIAMHNNISCGGLPPMPSLQKHETLPGQNGDIRSPKKLCNDYRSVLVERN 699
Query: 307 SFDSPVNGRLL-VNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KI 477
+F SPV RL+ N K KLPP P L+SAFASP RPN GGGGE G + FG K+
Sbjct: 700 TFTSPVKDRLMGFNSLKSKLPPPP-LQSAFASPTRPNPGGGGETCAETGINIFFGKIVKL 758
Query: 478 AFGRLN 495
A R++
Sbjct: 759 AAVRIS 764
>ref|XP_008810623.1| PREDICTED: retinoblastoma-related protein [Phoenix dactylifera]
Length = 1016
Score = 86.7 bits (213), Expect = 2e-14
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +3
Query: 84 WEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLPFHK 251
WEKGSS+YNSL ARP+ +AE RLGLL E MPSLDAIAMH++IS GG PPLPF K
Sbjct: 607 WEKGSSMYNSLIIARPTLAAEINRLGLLAEPMPSLDAIAMHHNISTGGLPPLPFQK 662
Score = 60.5 bits (145), Expect = 1e-06
Identities = 64/188 (34%), Positives = 76/188 (40%), Gaps = 31/188 (16%)
Frame = +1
Query: 28 RELRRHLYSLEEPLLGSRYGKKAP---------RCTTH*PLRGLPLLQNFIA*DY*WKPC 180
REL+RHL SLEE LL S +K R T + L LL
Sbjct: 588 RELKRHLNSLEERLLESMAWEKGSSMYNSLIIARPTLAAEINRLGLL------------A 635
Query: 181 HPWTQLPCIIVFPMEAFHHYPS--------INKLKTAKGQNGEMIP------------IE 300
P L I A HH S K + + QNG+ + +E
Sbjct: 636 EPMPSLDAI------AMHHNISTGGLPPLPFQKHEHSPDQNGDAVSPKRACSEYRSVLVE 689
Query: 301 RNSFDSPVNGRLLVNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--K 474
RNSF SPV R L K LPP L+SAFASP RPN GGGE G + F K
Sbjct: 690 RNSFTSPVKERTLTLNLKSNLPP---LQSAFASPTRPNPAGGGETCAETGINIFFNKIVK 746
Query: 475 IAFGRLNS 498
+A R+ S
Sbjct: 747 LAAIRIRS 754
>sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
gi|23429044|gb|AAM77469.1| retinoblastoma-like protein
[Cocos nucifera]
Length = 1011
Score = 85.5 bits (210), Expect = 4e-14
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +3
Query: 84 WEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLPFHK 251
WE+GSS+YNSL ARP+ +AE RLGLL E MPSLDAIA+HN+IS GG PPLPF K
Sbjct: 602 WERGSSMYNSLIVARPTLAAEINRLGLLAEPMPSLDAIAVHNNISTGGLPPLPFQK 657
Score = 57.8 bits (138), Expect = 9e-06
Identities = 61/182 (33%), Positives = 75/182 (41%), Gaps = 25/182 (13%)
Frame = +1
Query: 28 RELRRHLYSLEEPLLGSRYGKKAP---------RCTTH*PLRGLPLLQNFIA*DY*WKPC 180
REL+RHL SLEE LL S ++ R T + L LL
Sbjct: 583 RELKRHLNSLEERLLESMAWERGSSMYNSLIVARPTLAAEINRLGLL------------A 630
Query: 181 HPWTQLPCIIVFPMEAFHHYPSI--NKLKTAKGQNGEMIP------------IERNSFDS 318
P L I V + P + K + + QNG + +ERNSF S
Sbjct: 631 EPMPSLDAIAVHNNISTGGLPPLPFQKHEHSSDQNGGAVSPKRACSEYRSVLVERNSFTS 690
Query: 319 PVNGRLLVNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KIAFGRL 492
PV L K KLPP L+SAFASP RPN GGGE G + F K+A R+
Sbjct: 691 PVKELTLTLNLKSKLPP---LQSAFASPTRPNPAGGGETCAETGINIFFNKIVKLAAIRI 747
Query: 493 NS 498
S
Sbjct: 748 RS 749
>ref|XP_010908927.1| PREDICTED: retinoblastoma-related protein isoform X2 [Elaeis
guineensis]
Length = 924
Score = 84.7 bits (208), Expect = 7e-14
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +3
Query: 84 WEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLPFHK 251
WEKGSS+YNSL ARP+ +AE RLGLL E MPSLDAIA+H++IS GG PPLPF K
Sbjct: 607 WEKGSSMYNSLIVARPTLAAEINRLGLLAEPMPSLDAIAVHHNISTGGLPPLPFQK 662
Score = 63.5 bits (153), Expect = 2e-07
Identities = 63/182 (34%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Frame = +1
Query: 28 RELRRHLYSLEEPLLGSRYGKKAP---------RCTTH*PLRGLPLLQNFIA*DY*WKPC 180
REL+RHL SLEE LL S +K R T + L LL
Sbjct: 588 RELKRHLNSLEERLLESMAWEKGSSMYNSLIVARPTLAAEINRLGLL------------A 635
Query: 181 HPWTQLPCIIVFPMEAFHHYPSI--NKLKTAKGQNGEMIP------------IERNSFDS 318
P L I V + P + K + + QNG+ + +ERNSF S
Sbjct: 636 EPMPSLDAIAVHHNISTGGLPPLPFQKHEQSSDQNGDAVSPKRACSEYRSVLVERNSFTS 695
Query: 319 PVNGRLLVNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KIAFGRL 492
PV R L K KLPP L+SAFASP RPN GGGE G + F K+A R+
Sbjct: 696 PVKERTLTLNLKSKLPP---LQSAFASPTRPNPAGGGETCAETGINIFFNKIVKLAAIRI 752
Query: 493 NS 498
S
Sbjct: 753 RS 754
>ref|XP_010908926.1| PREDICTED: retinoblastoma-related protein isoform X1 [Elaeis
guineensis]
Length = 1020
Score = 84.7 bits (208), Expect = 7e-14
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +3
Query: 84 WEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLPFHK 251
WEKGSS+YNSL ARP+ +AE RLGLL E MPSLDAIA+H++IS GG PPLPF K
Sbjct: 607 WEKGSSMYNSLIVARPTLAAEINRLGLLAEPMPSLDAIAVHHNISTGGLPPLPFQK 662
Score = 63.5 bits (153), Expect = 2e-07
Identities = 63/182 (34%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Frame = +1
Query: 28 RELRRHLYSLEEPLLGSRYGKKAP---------RCTTH*PLRGLPLLQNFIA*DY*WKPC 180
REL+RHL SLEE LL S +K R T + L LL
Sbjct: 588 RELKRHLNSLEERLLESMAWEKGSSMYNSLIVARPTLAAEINRLGLL------------A 635
Query: 181 HPWTQLPCIIVFPMEAFHHYPSI--NKLKTAKGQNGEMIP------------IERNSFDS 318
P L I V + P + K + + QNG+ + +ERNSF S
Sbjct: 636 EPMPSLDAIAVHHNISTGGLPPLPFQKHEQSSDQNGDAVSPKRACSEYRSVLVERNSFTS 695
Query: 319 PVNGRLLVNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KIAFGRL 492
PV R L K KLPP L+SAFASP RPN GGGE G + F K+A R+
Sbjct: 696 PVKERTLTLNLKSKLPP---LQSAFASPTRPNPAGGGETCAETGINIFFNKIVKLAAIRI 752
Query: 493 NS 498
S
Sbjct: 753 RS 754
>ref|XP_008676706.1| PREDICTED: uncharacterized protein LOC100217179 isoform X4 [Zea
mays]
Length = 945
Score = 84.3 bits (207), Expect = 9e-14
Identities = 41/57 (71%), Positives = 44/57 (77%)
Frame = +3
Query: 84 WEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLPFHKQ 254
WEKGSS+YNSL ARP S E RLGLL E MPSLDAIA H++IS GG PPLPF KQ
Sbjct: 605 WEKGSSMYNSLIVARPVLSIEINRLGLLAEPMPSLDAIAAHHNISMGGLPPLPFQKQ 661
>ref|XP_008676705.1| PREDICTED: uncharacterized protein LOC100217179 isoform X3 [Zea
mays]
Length = 1002
Score = 84.3 bits (207), Expect = 9e-14
Identities = 41/57 (71%), Positives = 44/57 (77%)
Frame = +3
Query: 84 WEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLPFHKQ 254
WEKGSS+YNSL ARP S E RLGLL E MPSLDAIA H++IS GG PPLPF KQ
Sbjct: 604 WEKGSSMYNSLIVARPVLSIEINRLGLLAEPMPSLDAIAAHHNISMGGLPPLPFQKQ 660
>ref|XP_008676703.1| PREDICTED: uncharacterized protein LOC100217179 isoform X1 [Zea
mays]
Length = 1003
Score = 84.3 bits (207), Expect = 9e-14
Identities = 41/57 (71%), Positives = 44/57 (77%)
Frame = +3
Query: 84 WEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLPFHKQ 254
WEKGSS+YNSL ARP S E RLGLL E MPSLDAIA H++IS GG PPLPF KQ
Sbjct: 605 WEKGSSMYNSLIVARPVLSIEINRLGLLAEPMPSLDAIAAHHNISMGGLPPLPFQKQ 661
>ref|XP_008676704.1| PREDICTED: uncharacterized protein LOC100217179 isoform X2 [Zea
mays] gi|413925045|gb|AFW64977.1| hypothetical protein
ZEAMMB73_003481 [Zea mays]
Length = 1002
Score = 84.3 bits (207), Expect = 9e-14
Identities = 41/57 (71%), Positives = 44/57 (77%)
Frame = +3
Query: 84 WEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLPFHKQ 254
WEKGSS+YNSL ARP S E RLGLL E MPSLDAIA H++IS GG PPLPF KQ
Sbjct: 605 WEKGSSMYNSLIVARPVLSIEINRLGLLAEPMPSLDAIAAHHNISMGGLPPLPFQKQ 661
>ref|XP_006340923.1| PREDICTED: retinoblastoma-related protein 1-like [Solanum
tuberosum]
Length = 1018
Score = 81.3 bits (199), Expect(2) = 3e-13
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP 242
VWEKGSS+YNSLT A+PS SAE RLGLL E MPSLDAIAMH ++S G PP+P
Sbjct: 605 VWEKGSSMYNSLTVAKPSLSAEINRLGLLAEPMPSLDAIAMHINLSSGNLPPVP 658
Score = 21.6 bits (44), Expect(2) = 3e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 579 IRHEESLPRE 588
Score = 57.8 bits (138), Expect = 9e-06
Identities = 59/175 (33%), Positives = 73/175 (41%), Gaps = 16/175 (9%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + L +P +
Sbjct: 584 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVAKPSLSAEINRLGLLAEPMPSLDAI 643
Query: 199 PCIIVFPMEAFHHYPSINKLKTA-KGQNGEM------------IPIERNSFDSPVNGRLL 339
I P + K A G N ++ + +ERNSF SPV R L
Sbjct: 644 AMHINLSSGNLPPVPPLQKSDLAPNGHNCDIRSPKRLCTEYRSVLVERNSFTSPVKDRFL 703
Query: 340 -VNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KIAFGRLN 495
+ K K PP L+SAFASP RPN GGGGE + FG K+A R+N
Sbjct: 704 ALTNIKSKFPPP--LQSAFASPTRPNPGGGGETCAETSINVFFGKIVKLAAVRIN 756
>ref|XP_010250475.1| PREDICTED: retinoblastoma-related protein-like [Nelumbo nucifera]
Length = 1022
Score = 80.9 bits (198), Expect(2) = 4e-13
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP 242
VWEKGSS+YNSL ARP+ SAE R+GLL E MPSLDAIA+ N++S GG PPLP
Sbjct: 605 VWEKGSSMYNSLIVARPTLSAEINRMGLLAEPMPSLDAIAVQNNVSCGGLPPLP 658
Score = 21.6 bits (44), Expect(2) = 4e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 579 IRHEESLPRE 588
Score = 70.1 bits (170), Expect = 2e-09
Identities = 68/178 (38%), Positives = 80/178 (44%), Gaps = 25/178 (14%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAP---------RCTTH*PLRGLPLLQNFIA*DY*W 171
S RELRRHL SLEE LL S +K R T + + LL
Sbjct: 584 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLIVARPTLSAEINRMGLL---------- 633
Query: 172 KPCHPWTQLPCIIV---FPMEAFHHYPSINKLKTAKGQNGEM------------IPIERN 306
P L I V PS K +T+ GQNG++ + +E N
Sbjct: 634 --AEPMPSLDAIAVQNNVSCGGLPPLPSFQKHETSLGQNGDIRSPKRSCGERRNVLVECN 691
Query: 307 SFDSPVNGRLL-VNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGSKI 477
SF SPV RLL +N K KLPP L+SAFASP RPN GGGGE G + F SKI
Sbjct: 692 SFTSPVKDRLLALNSLKPKLPPP--LQSAFASPTRPNPGGGGETCAETGINVFF-SKI 746
>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
Full=Retinoblastoma-related protein [Ricinus communis]
gi|223530511|gb|EEF32393.1| conserved hypothetical
protein [Ricinus communis]
Length = 1020
Score = 80.9 bits (198), Expect(2) = 4e-13
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPL 239
VWEKGSS+YNSLT ARPS SAE RLGLL E MPSLDAIA+H + S GG PPL
Sbjct: 605 VWEKGSSMYNSLTVARPSLSAEINRLGLLAEPMPSLDAIAVHINFSSGGLPPL 657
Score = 21.6 bits (44), Expect(2) = 4e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 579 IRHEESLPRE 588
Score = 75.9 bits (185), Expect = 3e-11
Identities = 64/174 (36%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + L +P +
Sbjct: 584 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPSLSAEINRLGLLAEPMPSLDAI 643
Query: 199 PCIIVFPMEAFHHYPSINKLKTAKGQNGEM------------IPIERNSFDSPVNGRLLV 342
I F S++K + + GQNG++ + +ERNSF SPV RLL
Sbjct: 644 AVHINFSSGGLPPLSSVSKHEISPGQNGDIRSPKRPCTDYRSVLVERNSFTSPVKDRLLA 703
Query: 343 -NGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFG--SKIAFGRLN 495
K KLPP P L+SAFASP RPN GGGGE G + F +K+A R+N
Sbjct: 704 FTNLKSKLPPPP-LQSAFASPTRPNPGGGGETCAETGINIFFSKINKLAAVRIN 756
>ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein [Fragaria vesca subsp.
vesca]
Length = 1026
Score = 80.5 bits (197), Expect(2) = 6e-13
Identities = 65/174 (37%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + +P +
Sbjct: 591 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPAFSAEINRLGLLAEPMPSLDAI 650
Query: 199 PCIIVFPMEAFHHYPSINKLKTAKGQNGEM------------IPIERNSFDSPVNGRLL- 339
I F PS+ K +T+ GQNG++ + +ERNSF SPV RLL
Sbjct: 651 ALQINFSCGGLPPVPSLQKHETSPGQNGDLRSPKRPCTEHRGVLLERNSFTSPVKDRLLG 710
Query: 340 VNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KIAFGRLN 495
++ K KLPP P L+SAFASP RPN GGGGE G + F K+A R+N
Sbjct: 711 ISNLKSKLPPPP-LQSAFASPTRPNPGGGGETCAETGVSIFFNKIIKLAAVRIN 763
Score = 21.6 bits (44), Expect(2) = 6e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 586 IRHEESLPRE 595
>ref|NP_001266162.1| retinoblastoma-related protein 1 [Solanum lycopersicum]
gi|380710179|gb|AFD98848.1| retinoblastoma-related
protein 1 [Solanum lycopersicum]
Length = 1018
Score = 79.7 bits (195), Expect(2) = 9e-13
Identities = 39/54 (72%), Positives = 43/54 (79%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP 242
VWEKGSS+YNSLT A+PS SAE RLGLL E MPSLDAIAMH + S G PP+P
Sbjct: 605 VWEKGSSMYNSLTVAKPSLSAEINRLGLLAEPMPSLDAIAMHINPSLGNLPPVP 658
Score = 21.6 bits (44), Expect(2) = 9e-13
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 579 IRHEESLPRE 588
Score = 59.7 bits (143), Expect = 2e-06
Identities = 62/178 (34%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + P L I + P L
Sbjct: 584 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTV-AKPSLSAEI--NRLGLLAEPMPSL 640
Query: 199 PCIIVFPMEAFHHYPSINKL-KTAKGQNGEM---------------IPIERNSFDSPVNG 330
I + + + P + L K+ NG + + +ERNSF SPV
Sbjct: 641 DAIAMHINPSLGNLPPVPPLQKSDLAPNGHICDIRSPKRLCTEYRSVLVERNSFTSPVKD 700
Query: 331 RLL-VNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KIAFGRLN 495
R L + K K PP L+SAFASP RPN GGGGE + FG K+A R+N
Sbjct: 701 RFLALTNIKSKFPPP--LQSAFASPTRPNPGGGGETCAETSINVFFGKIVKLAAVRIN 756
>ref|XP_009774790.1| PREDICTED: retinoblastoma-related protein 1 isoform X1 [Nicotiana
sylvestris]
Length = 1010
Score = 79.0 bits (193), Expect(2) = 2e-12
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP-FHK 251
VWEKGSS+YNSL A+PS +AE R+GLL E MPSLDAIAMH ++S G PPLP HK
Sbjct: 596 VWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHK 653
Score = 21.6 bits (44), Expect(2) = 2e-12
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 570 IRHEESLPRE 579
Score = 62.0 bits (149), Expect = 5e-07
Identities = 63/183 (34%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + L +P +
Sbjct: 575 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAI 634
Query: 199 PCIIVFPMEAFHHYPSINKLKTA-KGQNGEM------------IPIERNSFDSPVNGRLL 339
I + PS++K A GQ G++ + +ERNSF SPV R L
Sbjct: 635 AMHINLSSGSLPPLPSLHKNNLAPNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFL 694
Query: 340 -VNGPKLKLPPYPFLRSAFA--------SPNRPNSGGGGEHLQRQGSMLSFGS--KIAFG 486
+N K K PP P L+SAFA SP RPN GGGGE + FG K+A
Sbjct: 695 ALNNIKSKFPP-PALQSAFARVDLLNFYSPTRPNPGGGGETCAETAINVFFGKIVKLAAV 753
Query: 487 RLN 495
R+N
Sbjct: 754 RIN 756
>ref|XP_009774791.1| PREDICTED: retinoblastoma-related protein 1 isoform X2 [Nicotiana
sylvestris]
Length = 1009
Score = 79.0 bits (193), Expect(2) = 2e-12
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP-FHK 251
VWEKGSS+YNSL A+PS +AE R+GLL E MPSLDAIAMH ++S G PPLP HK
Sbjct: 595 VWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHK 652
Score = 21.6 bits (44), Expect(2) = 2e-12
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 569 IRHEESLPRE 578
Score = 62.0 bits (149), Expect = 5e-07
Identities = 63/183 (34%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + L +P +
Sbjct: 574 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAI 633
Query: 199 PCIIVFPMEAFHHYPSINKLKTA-KGQNGEM------------IPIERNSFDSPVNGRLL 339
I + PS++K A GQ G++ + +ERNSF SPV R L
Sbjct: 634 AMHINLSSGSLPPLPSLHKNNLAPNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFL 693
Query: 340 -VNGPKLKLPPYPFLRSAFA--------SPNRPNSGGGGEHLQRQGSMLSFGS--KIAFG 486
+N K K PP P L+SAFA SP RPN GGGGE + FG K+A
Sbjct: 694 ALNNIKSKFPP-PALQSAFARVDLLNFYSPTRPNPGGGGETCAETAINVFFGKIVKLAAV 752
Query: 487 RLN 495
R+N
Sbjct: 753 RIN 755
>sp|Q66WV0.1|RBR1_NICBE RecName: Full=Retinoblastoma-related protein 1; Short=NbRBR1
[Nicotiana benthamiana] gi|51538007|gb|AAU05979.1|
retinoblastoma protein [Nicotiana benthamiana]
Length = 1003
Score = 79.0 bits (193), Expect(2) = 2e-12
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP-FHK 251
VWEKGSS+YNSL A+PS +AE R+GLL E MPSLDAIAMH ++S G PPLP HK
Sbjct: 596 VWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHK 653
Score = 21.6 bits (44), Expect(2) = 2e-12
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 570 IRHEESLPRE 579
Score = 68.9 bits (167), Expect = 4e-09
Identities = 63/175 (36%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + L +P +
Sbjct: 575 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAI 634
Query: 199 PCIIVFPMEAFHHYPSINKLKTA-KGQNGEM------------IPIERNSFDSPVNGRLL 339
I + PS++K A GQ G++ + +ERNSF SPV R L
Sbjct: 635 AMHINLSSGSLPPLPSLHKNNLAPNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFL 694
Query: 340 -VNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KIAFGRLN 495
+N K K PP P L SAFASP RPN GGGGE + FG K+A R+N
Sbjct: 695 ALNNIKSKFPP-PALHSAFASPTRPNPGGGGETCAETAINVFFGKIVKLAAVRIN 748
>ref|XP_009774792.1| PREDICTED: retinoblastoma-related protein 1 isoform X3 [Nicotiana
sylvestris]
Length = 1002
Score = 79.0 bits (193), Expect(2) = 2e-12
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP-FHK 251
VWEKGSS+YNSL A+PS +AE R+GLL E MPSLDAIAMH ++S G PPLP HK
Sbjct: 596 VWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHK 653
Score = 21.6 bits (44), Expect(2) = 2e-12
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 570 IRHEESLPRE 579
Score = 69.3 bits (168), Expect = 3e-09
Identities = 63/175 (36%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + L +P +
Sbjct: 575 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAI 634
Query: 199 PCIIVFPMEAFHHYPSINKLKTA-KGQNGEM------------IPIERNSFDSPVNGRLL 339
I + PS++K A GQ G++ + +ERNSF SPV R L
Sbjct: 635 AMHINLSSGSLPPLPSLHKNNLAPNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFL 694
Query: 340 -VNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KIAFGRLN 495
+N K K PP P L+SAFASP RPN GGGGE + FG K+A R+N
Sbjct: 695 ALNNIKSKFPP-PALQSAFASPTRPNPGGGGETCAETAINVFFGKIVKLAAVRIN 748
>ref|XP_009774793.1| PREDICTED: retinoblastoma-related protein 1 isoform X4 [Nicotiana
sylvestris]
Length = 970
Score = 79.0 bits (193), Expect(2) = 2e-12
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP-FHK 251
VWEKGSS+YNSL A+PS +AE R+GLL E MPSLDAIAMH ++S G PPLP HK
Sbjct: 596 VWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHK 653
Score = 21.6 bits (44), Expect(2) = 2e-12
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 570 IRHEESLPRE 579
Score = 62.0 bits (149), Expect = 5e-07
Identities = 63/183 (34%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + L +P +
Sbjct: 575 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAI 634
Query: 199 PCIIVFPMEAFHHYPSINKLKTA-KGQNGEM------------IPIERNSFDSPVNGRLL 339
I + PS++K A GQ G++ + +ERNSF SPV R L
Sbjct: 635 AMHINLSSGSLPPLPSLHKNNLAPNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFL 694
Query: 340 -VNGPKLKLPPYPFLRSAFA--------SPNRPNSGGGGEHLQRQGSMLSFGS--KIAFG 486
+N K K PP P L+SAFA SP RPN GGGGE + FG K+A
Sbjct: 695 ALNNIKSKFPP-PALQSAFARVDLLNFYSPTRPNPGGGGETCAETAINVFFGKIVKLAAV 753
Query: 487 RLN 495
R+N
Sbjct: 754 RIN 756
>ref|XP_009774794.1| PREDICTED: retinoblastoma-related protein 1 isoform X5 [Nicotiana
sylvestris]
Length = 961
Score = 79.0 bits (193), Expect(2) = 2e-12
Identities = 39/58 (67%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Frame = +3
Query: 81 VWEKGSSLYNSLTFARPSPSAEFYRLGLLVETMPSLDAIAMHNSISYGGFPPLP-FHK 251
VWEKGSS+YNSL A+PS +AE R+GLL E MPSLDAIAMH ++S G PPLP HK
Sbjct: 595 VWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHK 652
Score = 21.6 bits (44), Expect(2) = 2e-12
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 IRHEESLQRE 31
IRHEESL RE
Sbjct: 569 IRHEESLPRE 578
Score = 69.3 bits (168), Expect = 3e-09
Identities = 63/175 (36%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Frame = +1
Query: 19 SSERELRRHLYSLEEPLLGSRYGKKAPRCTTH*PLRGLPLLQNFIA*DY*WKPCHPWTQL 198
S RELRRHL SLEE LL S +K + L +P +
Sbjct: 574 SLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAI 633
Query: 199 PCIIVFPMEAFHHYPSINKLKTA-KGQNGEM------------IPIERNSFDSPVNGRLL 339
I + PS++K A GQ G++ + +ERNSF SPV R L
Sbjct: 634 AMHINLSSGSLPPLPSLHKNNLAPNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFL 693
Query: 340 -VNGPKLKLPPYPFLRSAFASPNRPNSGGGGEHLQRQGSMLSFGS--KIAFGRLN 495
+N K K PP P L+SAFASP RPN GGGGE + FG K+A R+N
Sbjct: 694 ALNNIKSKFPP-PALQSAFASPTRPNPGGGGETCAETAINVFFGKIVKLAAVRIN 747