BLASTX nr result
ID: Papaver30_contig00054921
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00054921
(1014 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003590535.1| DNA-directed RNA polymerase subunit alpha [M... 182 2e-64
ref|YP_009114901.1| RNA polymerase alpha subunit [Thalictrum cor... 253 2e-64
ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis ... 251 7e-64
ref|YP_009092335.1| RNA polymerase alpha subunit (chloroplast) [... 250 1e-63
gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus] 250 1e-63
ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus mac... 250 1e-63
gb|AKM98453.1| RNA polymerase alpha subunit (chloroplast) [Pulsa... 249 2e-63
gb|AKM98101.1| RNA polymerase alpha subunit (chloroplast) [Anemo... 249 2e-63
ref|YP_009093981.1| RNA polymerase alpha subunit (chloroplast) [... 249 3e-63
ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]... 249 3e-63
gb|ADD31217.1| RNA polymerase alpha subunit protein (chloroplast... 247 1e-62
ref|YP_009123284.1| RNA polymerase alpha subunit (chloroplast) [... 246 2e-62
gb|ADD31230.1| RNA polymerase alpha subunit protein (chloroplast... 246 2e-62
ref|YP_008963723.1| RNA polymerase alpha subunit (chloroplast) [... 246 2e-62
ref|YP_001294130.1| RNA polymerase alpha subunit [Chloranthus sp... 246 2e-62
gb|AJE72035.1| RNA polymerase alpha subunit (plastid) [Chamaecri... 246 2e-62
gb|AGN74011.1| RNA polymerase alpha subunit (chloroplast) [Aconi... 246 3e-62
gb|ADD31234.1| RNA polymerase alpha subunit protein (chloroplast... 246 3e-62
gb|ADD31215.1| RNA polymerase alpha subunit protein (chloroplast... 245 4e-62
ref|YP_009169384.1| RNA polymerase alpha subunit (chloroplast) [... 244 6e-62
>ref|XP_003590535.1| DNA-directed RNA polymerase subunit alpha [Medicago truncatula]
gi|355479583|gb|AES60786.1| DNA-directed RNA polymerase
subunit alpha [Medicago truncatula]
Length = 233
Score = 182 bits (462), Expect(2) = 2e-64
Identities = 89/112 (79%), Positives = 99/112 (88%)
Frame = -1
Query: 390 REEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGTCI 211
R++V VSTRTLQWKCVESR DSK LYYGRFIL+PL K QA IGIAMRR L GEIEGTCI
Sbjct: 71 RQKVKVSTRTLQWKCVESRVDSKCLYYGRFILTPLRKDQAHIIGIAMRRILFGEIEGTCI 130
Query: 210 TRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPG 55
TRAK +KIPHEYSTI+GI+ES+HEILMNLKE +L+SNLYGTRDASIC +G G
Sbjct: 131 TRAKSEKIPHEYSTILGIQESIHEILMNLKENILKSNLYGTRDASICFKGHG 182
Score = 92.8 bits (229), Expect(2) = 2e-64
Identities = 46/60 (76%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = -2
Query: 665 AQTAAGNAIRTV-VDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGC 489
AQ +R V +DQGMQRAEV+IKGPGLGRDAALRAIRRSGILL F+ DVTPMPHNGC
Sbjct: 6 AQKPCSQLLRAVWIDQGMQRAEVIIKGPGLGRDAALRAIRRSGILLRFIGDVTPMPHNGC 65
>ref|YP_009114901.1| RNA polymerase alpha subunit [Thalictrum coreanum]
gi|721136338|gb|AIX03549.1| RNA polymerase alpha subunit
(plastid) [Thalictrum coreanum]
Length = 337
Score = 253 bits (645), Expect = 2e-64
Identities = 126/132 (95%), Positives = 130/132 (98%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEI+DT
Sbjct: 121 IISPPSVEIIDT 132
>ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis saniculifolia]
gi|226933914|gb|ACO92047.1| RNA polymerase alpha subunit
(chloroplast) [Megaleranthis saniculifolia]
Length = 328
Score = 251 bits (641), Expect = 7e-64
Identities = 126/131 (96%), Positives = 129/131 (98%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQD 120
Query: 36 IILPPSVEIVD 4
II PPSVEIVD
Sbjct: 121 IISPPSVEIVD 131
>ref|YP_009092335.1| RNA polymerase alpha subunit (chloroplast) [Macadamia integrifolia]
gi|563321861|gb|AHB38190.1| RNA polymerase alpha subunit
(chloroplast) [Macadamia integrifolia]
Length = 328
Score = 250 bits (638), Expect = 1e-63
Identities = 125/132 (94%), Positives = 130/132 (98%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+REEVAVSTRTL+WKCVESRADSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLEWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTR+ASICVRGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRNASICVRGPGYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEIVDT
Sbjct: 121 IISPPSVEIVDT 132
>gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus]
Length = 339
Score = 250 bits (638), Expect = 1e-63
Identities = 125/132 (94%), Positives = 129/132 (97%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
MLR+EVAVS RTLQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MLRDEVAVSARTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEIVDT
Sbjct: 121 IISPPSVEIVDT 132
>ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus macranthus]
gi|158514028|sp|A1XGS0.1|RPOA_RANMC RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
(chloroplast) [Ranunculus macranthus]
gi|85540836|gb|ABC70788.1| RNA polymerase alpha subunit
(chloroplast) [Ranunculus macranthus]
Length = 346
Score = 250 bits (638), Expect = 1e-63
Identities = 125/132 (94%), Positives = 129/132 (97%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
MLR+EVAVS RTLQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MLRDEVAVSARTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVKGPGYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEIVDT
Sbjct: 121 IISPPSVEIVDT 132
>gb|AKM98453.1| RNA polymerase alpha subunit (chloroplast) [Pulsatilla vernalis]
gi|844170749|gb|AKM98541.1| RNA polymerase alpha subunit
(chloroplast) [Pulsatilla vernalis]
Length = 339
Score = 249 bits (637), Expect = 2e-63
Identities = 125/140 (89%), Positives = 132/140 (94%)
Frame = -1
Query: 420 II*SKKITMLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRA 241
+I S +TM REEVAVSTRTLQWKCVESR DSKR +YGRFILSPL+KGQADTIGIAMRRA
Sbjct: 1 MIGSNNMTMFREEVAVSTRTLQWKCVESREDSKRFFYGRFILSPLMKGQADTIGIAMRRA 60
Query: 240 LLGEIEGTCITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRG 61
LLGEIEGTCITRAK +KIPHEYSTIVGIEESVHEILMNLKEIVL+SNLYGTRDASICV+G
Sbjct: 61 LLGEIEGTCITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLKSNLYGTRDASICVKG 120
Query: 60 PGYVTAQDIILPPSVEIVDT 1
PGYVTAQDII PPSVEIVDT
Sbjct: 121 PGYVTAQDIISPPSVEIVDT 140
>gb|AKM98101.1| RNA polymerase alpha subunit (chloroplast) [Anemone patens]
gi|844170228|gb|AKM98189.1| RNA polymerase alpha subunit
(chloroplast) [Anemone patens]
gi|844170354|gb|AKM98277.1| RNA polymerase alpha subunit
(chloroplast) [Pulsatilla pratensis]
gi|844170476|gb|AKM98365.1| RNA polymerase alpha subunit
(chloroplast) [Pulsatilla pratensis]
Length = 339
Score = 249 bits (637), Expect = 2e-63
Identities = 125/140 (89%), Positives = 132/140 (94%)
Frame = -1
Query: 420 II*SKKITMLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRA 241
+I S +TM REEVAVSTRTLQWKCVESR DSKR +YGRFILSPL+KGQADTIGIAMRRA
Sbjct: 1 MIGSNNMTMFREEVAVSTRTLQWKCVESREDSKRFFYGRFILSPLMKGQADTIGIAMRRA 60
Query: 240 LLGEIEGTCITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRG 61
LLGEIEGTCITRAK +KIPHEYSTIVGIEESVHEILMNLKEIVL+SNLYGTRDASICV+G
Sbjct: 61 LLGEIEGTCITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLKSNLYGTRDASICVKG 120
Query: 60 PGYVTAQDIILPPSVEIVDT 1
PGYVTAQDII PPSVEIVDT
Sbjct: 121 PGYVTAQDIISPPSVEIVDT 140
>ref|YP_009093981.1| RNA polymerase alpha subunit (chloroplast) [Nelumbo nucifera]
gi|224474255|gb|ACN49441.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
gi|290489668|gb|ADD31218.1| RNA polymerase alpha subunit
protein (chloroplast) [Nelumbo nucifera]
gi|383286829|gb|AFH01479.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
gi|519666943|gb|AGO98555.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
gi|725824076|gb|AIY33855.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
Length = 339
Score = 249 bits (635), Expect = 3e-63
Identities = 124/132 (93%), Positives = 128/132 (96%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+REE+AVSTRTLQWKCVESR DSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDA ICVRGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDAFICVRGPGYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEIVDT
Sbjct: 121 IISPPSVEIVDT 132
>ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]
gi|224474167|gb|ACN49356.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo lutea]
gi|383286921|gb|AFH01570.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo lutea]
Length = 339
Score = 249 bits (635), Expect = 3e-63
Identities = 124/132 (93%), Positives = 128/132 (96%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+REE+AVSTRTLQWKCVESR DSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDA ICVRGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDAFICVRGPGYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEIVDT
Sbjct: 121 IISPPSVEIVDT 132
>gb|ADD31217.1| RNA polymerase alpha subunit protein (chloroplast) [Meliosma aff.
cuneifolia Moore 333]
Length = 337
Score = 247 bits (630), Expect = 1e-62
Identities = 124/132 (93%), Positives = 128/132 (96%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+REEVAVSTRTLQWKCVESRADSKRLYYGRFI+SPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEVAVSTRTLQWKCVESRADSKRLYYGRFIMSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK + IPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD
Sbjct: 61 CITRAKSETIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II P SVEIVDT
Sbjct: 121 IISPSSVEIVDT 132
>ref|YP_009123284.1| RNA polymerase alpha subunit (chloroplast) [Chloranthus japonicus]
gi|756761888|gb|AJM70003.1| RNA polymerase alpha subunit
(chloroplast) [Chloranthus japonicus]
Length = 334
Score = 246 bits (629), Expect = 2e-62
Identities = 121/132 (91%), Positives = 128/132 (96%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+REE+AVSTRTLQWKCVESRADSKRLYYGRF+LSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAVSTRTLQWKCVESRADSKRLYYGRFMLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK DK+PHEYSTIVGIEES+HEI MNLKEIVLRSNLYGTR+ASICVRGP YVTAQD
Sbjct: 61 CITRAKLDKVPHEYSTIVGIEESIHEIFMNLKEIVLRSNLYGTRNASICVRGPRYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEIVDT
Sbjct: 121 IISPPSVEIVDT 132
>gb|ADD31230.1| RNA polymerase alpha subunit protein (chloroplast) [Liquidambar
styraciflua]
Length = 338
Score = 246 bits (629), Expect = 2e-62
Identities = 122/131 (93%), Positives = 128/131 (97%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+RE+V VSTRTLQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGI+ESVHEILMNLKE+VLRSNLYGTRDASICVRGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGTRDASICVRGPGYVTAQD 120
Query: 36 IILPPSVEIVD 4
II PPSVEIVD
Sbjct: 121 IISPPSVEIVD 131
>ref|YP_008963723.1| RNA polymerase alpha subunit (chloroplast) [Liquidambar formosana]
gi|491650402|gb|AGL13462.1| RNA polymerase alpha subunit
(chloroplast) [Liquidambar formosana]
Length = 337
Score = 246 bits (629), Expect = 2e-62
Identities = 122/131 (93%), Positives = 128/131 (97%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+RE+V VSTRTLQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGI+ESVHEILMNLKE+VLRSNLYGTRDASICVRGPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEVVLRSNLYGTRDASICVRGPGYVTAQD 120
Query: 36 IILPPSVEIVD 4
II PPSVEIVD
Sbjct: 121 IISPPSVEIVD 131
>ref|YP_001294130.1| RNA polymerase alpha subunit [Chloranthus spicatus]
gi|172048690|sp|A6MMF4.1|RPOA_CHLSC RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
(chloroplast) [Chloranthus spicatus]
gi|146744219|gb|ABQ43291.1| RNA polymerase alpha subunit
(chloroplast) [Chloranthus spicatus]
Length = 334
Score = 246 bits (629), Expect = 2e-62
Identities = 121/132 (91%), Positives = 128/132 (96%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+REE+AVSTRTLQWKCVESRADSKRLYYGRF+LSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREEIAVSTRTLQWKCVESRADSKRLYYGRFMLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK DK+PHEYSTIVGIEES+HEI MNLKEIVLRSNLYGTR+ASICVRGP YVTAQD
Sbjct: 61 CITRAKLDKVPHEYSTIVGIEESIHEIFMNLKEIVLRSNLYGTRNASICVRGPRYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEIVDT
Sbjct: 121 IISPPSVEIVDT 132
>gb|AJE72035.1| RNA polymerase alpha subunit (plastid) [Chamaecrista fasciculata]
Length = 331
Score = 246 bits (628), Expect = 2e-62
Identities = 122/131 (93%), Positives = 129/131 (98%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+RE+V VSTRTLQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVRVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGI+ESVHEILMNLK+IVLRSNLYGTRDASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKKIVLRSNLYGTRDASICVKGPGYVTAQD 120
Query: 36 IILPPSVEIVD 4
IILPPSVEIVD
Sbjct: 121 IILPPSVEIVD 131
>gb|AGN74011.1| RNA polymerase alpha subunit (chloroplast) [Aconitum barbatum var.
puberulum]
Length = 337
Score = 246 bits (627), Expect = 3e-62
Identities = 122/132 (92%), Positives = 128/132 (96%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
MLRE+VA STRTLQWKCVESRADSKRLYYGRF+LSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MLREKVAASTRTLQWKCVESRADSKRLYYGRFLLSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGIEESVHEILMNLKEI+LRSNLYGTRDA ICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIEESVHEILMNLKEILLRSNLYGTRDAYICVKGPGYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEIVDT
Sbjct: 121 IISPPSVEIVDT 132
>gb|ADD31234.1| RNA polymerase alpha subunit protein (chloroplast) [Staphylea
colchica]
Length = 342
Score = 246 bits (627), Expect = 3e-62
Identities = 121/131 (92%), Positives = 128/131 (97%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+RE+V VSTRTLQWKCVESRAD KRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADRKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTIVGI+ESVHEILMNLKEIVLRSNLYGTRDASIC++GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTRDASICIKGPGYVTAQD 120
Query: 36 IILPPSVEIVD 4
IILPPSVEIVD
Sbjct: 121 IILPPSVEIVD 131
>gb|ADD31215.1| RNA polymerase alpha subunit protein (chloroplast) [Ilex cornuta]
Length = 337
Score = 245 bits (626), Expect = 4e-62
Identities = 122/131 (93%), Positives = 127/131 (96%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M+RE+V VSTRTLQWKCVESRADSKRLYYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MVREKVTVSTRTLQWKCVESRADSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAKF+KIPHEYSTIVGI+ESVHEILMNLKEIVLRSNLYGT DASICVRGPGYVT QD
Sbjct: 61 CITRAKFEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTTQD 120
Query: 36 IILPPSVEIVD 4
IILPP VEIVD
Sbjct: 121 IILPPYVEIVD 131
>ref|YP_009169384.1| RNA polymerase alpha subunit (chloroplast) [Clematis terniflora]
gi|687814883|gb|AIQ81125.1| RNA polymerase alpha subunit
(chloroplast) [Clematis terniflora]
Length = 339
Score = 244 bits (624), Expect = 6e-62
Identities = 122/132 (92%), Positives = 126/132 (95%)
Frame = -1
Query: 396 MLREEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQADTIGIAMRRALLGEIEGT 217
M REEVAVSTRTLQWKCVESR DSKR YYGRFILSPL+KGQADTIGIAMRRALLGEIEGT
Sbjct: 1 MFREEVAVSTRTLQWKCVESREDSKRFYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60
Query: 216 CITRAKFDKIPHEYSTIVGIEESVHEILMNLKEIVLRSNLYGTRDASICVRGPGYVTAQD 37
CITRAK +KIPHEYSTI GIEESVHEILMNLKEIVL+SNLYGTRDASICV+GPGYVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIEGIEESVHEILMNLKEIVLKSNLYGTRDASICVKGPGYVTAQD 120
Query: 36 IILPPSVEIVDT 1
II PPSVEIVDT
Sbjct: 121 IISPPSVEIVDT 132