BLASTX nr result

ID: Papaver30_contig00053974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00053974
         (517 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007039140.1| Transcription factor IIIC, subunit 5, putati...    58   2e-06
ref|XP_007039139.1| Transcription factor IIIC, subunit 5, putati...    58   2e-06
ref|XP_007039138.1| General transcription factor 3C polypeptide ...    58   2e-06
ref|XP_011463418.1| PREDICTED: general transcription factor 3C p...    57   5e-06
ref|XP_004297697.1| PREDICTED: general transcription factor 3C p...    57   5e-06
ref|XP_011465770.1| PREDICTED: general transcription factor 3C p...    57   7e-06
ref|XP_004287180.2| PREDICTED: general transcription factor 3C p...    57   7e-06

>ref|XP_007039140.1| Transcription factor IIIC, subunit 5, putative isoform 3 [Theobroma
           cacao] gi|508776385|gb|EOY23641.1| Transcription factor
           IIIC, subunit 5, putative isoform 3 [Theobroma cacao]
          Length = 579

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = +1

Query: 163 SEKLKEF*RKRGDLCPFRVFPWKCQTALQLFKLDDGYFQQEIKK 294
           + KLK    K  DLC FRVFP+KCQT LQLF+LDD Y QQEI+K
Sbjct: 356 ANKLKH---KWEDLCSFRVFPYKCQTFLQLFELDDDYIQQEIRK 396


>ref|XP_007039139.1| Transcription factor IIIC, subunit 5, putative isoform 2 [Theobroma
           cacao] gi|508776384|gb|EOY23640.1| Transcription factor
           IIIC, subunit 5, putative isoform 2 [Theobroma cacao]
          Length = 582

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = +1

Query: 163 SEKLKEF*RKRGDLCPFRVFPWKCQTALQLFKLDDGYFQQEIKK 294
           + KLK    K  DLC FRVFP+KCQT LQLF+LDD Y QQEI+K
Sbjct: 356 ANKLKH---KWEDLCSFRVFPYKCQTFLQLFELDDDYIQQEIRK 396


>ref|XP_007039138.1| General transcription factor 3C polypeptide 5, putative isoform 1
           [Theobroma cacao] gi|508776383|gb|EOY23639.1| General
           transcription factor 3C polypeptide 5, putative isoform
           1 [Theobroma cacao]
          Length = 630

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/44 (65%), Positives = 33/44 (75%)
 Frame = +1

Query: 163 SEKLKEF*RKRGDLCPFRVFPWKCQTALQLFKLDDGYFQQEIKK 294
           + KLK    K  DLC FRVFP+KCQT LQLF+LDD Y QQEI+K
Sbjct: 364 ANKLKH---KWEDLCSFRVFPYKCQTFLQLFELDDDYIQQEIRK 404


>ref|XP_011463418.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           isoform X2 [Fragaria vesca subsp. vesca]
          Length = 550

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 190 KRGDLCPFRVFPWKCQTALQLFKLDDGYFQQEIKKA 297
           K  DLC FRVFP+KC T LQLF+LDD Y Q++I+KA
Sbjct: 341 KWSDLCAFRVFPYKCHTTLQLFELDDNYIQEQIRKA 376


>ref|XP_004297697.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           isoform X1 [Fragaria vesca subsp. vesca]
          Length = 553

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 190 KRGDLCPFRVFPWKCQTALQLFKLDDGYFQQEIKKA 297
           K  DLC FRVFP+KC T LQLF+LDD Y Q++I+KA
Sbjct: 341 KWSDLCAFRVFPYKCHTTLQLFELDDNYIQEQIRKA 376


>ref|XP_011465770.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           isoform X2 [Fragaria vesca subsp. vesca]
          Length = 547

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 190 KRGDLCPFRVFPWKCQTALQLFKLDDGYFQQEIKKA 297
           K  DLC FRVFP+KC T LQLF+LDD Y Q++I+KA
Sbjct: 337 KWSDLCAFRVFPYKCHTTLQLFELDDDYIQEQIRKA 372


>ref|XP_004287180.2| PREDICTED: general transcription factor 3C polypeptide 5-like
           isoform X1 [Fragaria vesca subsp. vesca]
           gi|764506490|ref|XP_011465739.1| PREDICTED: general
           transcription factor 3C polypeptide 5-like isoform X1
           [Fragaria vesca subsp. vesca]
          Length = 550

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 190 KRGDLCPFRVFPWKCQTALQLFKLDDGYFQQEIKKA 297
           K  DLC FRVFP+KC T LQLF+LDD Y Q++I+KA
Sbjct: 337 KWSDLCAFRVFPYKCHTTLQLFELDDDYIQEQIRKA 372


Top