BLASTX nr result
ID: Papaver30_contig00053721
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00053721
(1533 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010062970.1| PREDICTED: pentatricopeptide repeat-containi... 45 1e-08
gb|KCW70130.1| hypothetical protein EUGRSUZ_F03427 [Eucalyptus g... 45 1e-08
gb|KCW70131.1| hypothetical protein EUGRSUZ_F03427 [Eucalyptus g... 45 1e-08
ref|XP_009591130.1| PREDICTED: pentatricopeptide repeat-containi... 49 1e-07
ref|XP_009769116.1| PREDICTED: pentatricopeptide repeat-containi... 49 2e-07
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,... 42 9e-07
gb|KCW70132.1| hypothetical protein EUGRSUZ_F03427 [Eucalyptus g... 44 9e-06
>ref|XP_010062970.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
mitochondrial-like [Eucalyptus grandis]
Length = 878
Score = 45.4 bits (106), Expect(2) = 1e-08
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = -3
Query: 766 EKLLHFIYSYANSIPVLVVEDTMSEFEKLHEKFHVPVPAYL*YGEPFKY*CALLF*VELS 587
E + FI+ Y +P LVVED +S+F LHEK V P+ YG Y CA L E+
Sbjct: 385 EHVTKFIFDYVAYMPNLVVEDVISKFRSLHEKLKVK-PSSTSYGSLINYCCASL---EVK 440
Query: 586 RKLDLV 569
LD+V
Sbjct: 441 TALDIV 446
Score = 43.5 bits (101), Expect(2) = 1e-08
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = -2
Query: 563 VYLRICQHILKPSS--FRRMINLLVRVEDFDGAYNMLSDMKEMGV 435
+Y + +H L P++ FR MINL VR+ DFD AYNML D + M +
Sbjct: 480 IYSMMHRHNLIPNTDIFRSMINLSVRMRDFDSAYNMLEDAQRMNL 524
>gb|KCW70130.1| hypothetical protein EUGRSUZ_F03427 [Eucalyptus grandis]
Length = 774
Score = 45.4 bits (106), Expect(2) = 1e-08
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = -3
Query: 766 EKLLHFIYSYANSIPVLVVEDTMSEFEKLHEKFHVPVPAYL*YGEPFKY*CALLF*VELS 587
E + FI+ Y +P LVVED +S+F LHEK V P+ YG Y CA L E+
Sbjct: 281 EHVTKFIFDYVAYMPNLVVEDVISKFRSLHEKLKVK-PSSTSYGSLINYCCASL---EVK 336
Query: 586 RKLDLV 569
LD+V
Sbjct: 337 TALDIV 342
Score = 43.5 bits (101), Expect(2) = 1e-08
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = -2
Query: 563 VYLRICQHILKPSS--FRRMINLLVRVEDFDGAYNMLSDMKEMGV 435
+Y + +H L P++ FR MINL VR+ DFD AYNML D + M +
Sbjct: 376 IYSMMHRHNLIPNTDIFRSMINLSVRMRDFDSAYNMLEDAQRMNL 420
>gb|KCW70131.1| hypothetical protein EUGRSUZ_F03427 [Eucalyptus grandis]
Length = 700
Score = 45.4 bits (106), Expect(2) = 1e-08
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = -3
Query: 766 EKLLHFIYSYANSIPVLVVEDTMSEFEKLHEKFHVPVPAYL*YGEPFKY*CALLF*VELS 587
E + FI+ Y +P LVVED +S+F LHEK V P+ YG Y CA L E+
Sbjct: 207 EHVTKFIFDYVAYMPNLVVEDVISKFRSLHEKLKVK-PSSTSYGSLINYCCASL---EVK 262
Query: 586 RKLDLV 569
LD+V
Sbjct: 263 TALDIV 268
Score = 43.5 bits (101), Expect(2) = 1e-08
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = -2
Query: 563 VYLRICQHILKPSS--FRRMINLLVRVEDFDGAYNMLSDMKEMGV 435
+Y + +H L P++ FR MINL VR+ DFD AYNML D + M +
Sbjct: 302 IYSMMHRHNLIPNTDIFRSMINLSVRMRDFDSAYNMLEDAQRMNL 346
>ref|XP_009591130.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
mitochondrial-like isoform X1 [Nicotiana
tomentosiformis]
Length = 858
Score = 48.5 bits (114), Expect(2) = 1e-07
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = -2
Query: 563 VYLRICQHILKPSS--FRRMINLLVRVEDFDGAYNMLSDMKEMGVM 432
+Y + +H LKP S FR MIN+ VR +DF+GAY M+ D+K+ VM
Sbjct: 460 IYSMLLRHGLKPDSETFRIMINMTVRAKDFEGAYGMIEDLKKFDVM 505
Score = 36.6 bits (83), Expect(2) = 1e-07
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = -3
Query: 766 EKLLHFIYSYANSIPVLVVEDTMSEFEKLHEKFHVPVPAYL*YGEPFKY*CALLF*VELS 587
E + FIY+Y S+P +ED M EF+ LH + + P Y + Y C LF V ++
Sbjct: 365 ENISKFIYNYTTSMPNFALEDVMLEFKNLHAELEL-TPTSSQYQKLIMY-CCELFKVHVA 422
Query: 586 RKLDLV 569
LD+V
Sbjct: 423 --LDMV 426
>ref|XP_009769116.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
mitochondrial-like [Nicotiana sylvestris]
Length = 858
Score = 48.5 bits (114), Expect(2) = 2e-07
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = -2
Query: 563 VYLRICQHILKPSS--FRRMINLLVRVEDFDGAYNMLSDMKEMGVM 432
+Y + +H LKP S FR MIN+ VR +DF+GAY M+ D+K+ VM
Sbjct: 460 IYSMLLRHGLKPDSETFRIMINMTVRAKDFEGAYGMIEDLKKFDVM 505
Score = 36.2 bits (82), Expect(2) = 2e-07
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = -3
Query: 766 EKLLHFIYSYANSIPVLVVEDTMSEFEKLHEKFHVPVPAYL*YGEPFKY*CALLF*VELS 587
E + FIY+Y S+P +ED M EF+ LH + + P Y + Y C LF V ++
Sbjct: 365 ENISKFIYNYTTSMPNFALEDVMLEFKNLHAEVEL-TPTSSQYQKLIMY-CCELFKVHVA 422
Query: 586 RKLDLV 569
LD+V
Sbjct: 423 --LDMV 426
>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 867
Score = 42.0 bits (97), Expect(2) = 9e-07
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Frame = -2
Query: 563 VYLRICQHILKPSS--FRRMINLLVRVEDFDGAYNMLSDMKE 444
+Y IC H L P++ FR MI L V+++DF GA++ML D+K+
Sbjct: 484 IYSLICHHNLTPNNETFRSMIKLRVKMKDFCGAHDMLDDLKK 525
Score = 40.4 bits (93), Expect(2) = 9e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = -3
Query: 772 ETEKLLHFIYSYANSIPVLVVEDTMSEFEKLHEKFHVPVPAYL*YGEPFKY*CALLF*VE 593
+TE + I+SYA S+P L VED + +F+ LH +P P+ Y + Y C LL +
Sbjct: 387 DTENISTLIFSYATSVPNLAVEDAILKFKNLHVMLEMP-PSSKSYEKLIIYSCDLL---K 442
Query: 592 LSRKLDLV 569
+ LD+V
Sbjct: 443 VHAALDIV 450
>gb|KCW70132.1| hypothetical protein EUGRSUZ_F03427 [Eucalyptus grandis]
Length = 479
Score = 43.5 bits (101), Expect(2) = 9e-06
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Frame = -2
Query: 563 VYLRICQHILKPSS--FRRMINLLVRVEDFDGAYNMLSDMKEMGV 435
+Y + +H L P++ FR MINL VR+ DFD AYNML D + M +
Sbjct: 81 IYSMMHRHNLIPNTDIFRSMINLSVRMRDFDSAYNMLEDAQRMNL 125
Score = 35.4 bits (80), Expect(2) = 9e-06
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = -3
Query: 721 VLVVEDTMSEFEKLHEKFHVPVPAYL*YGEPFKY*CALLF*VELSRKLDLV 569
+L+VED +S+F LHEK V P+ YG Y CA L E+ LD+V
Sbjct: 1 MLLVEDVISKFRSLHEKLKVK-PSSTSYGSLINYCCASL---EVKTALDIV 47