BLASTX nr result
ID: Papaver30_contig00051787
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00051787
(711 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 108 1e-38
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] 107 2e-37
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 117 9e-37
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 98 2e-36
emb|CBI36090.3| unnamed protein product [Vitis vinifera] 100 6e-34
ref|XP_013694300.1| PREDICTED: uncharacterized protein LOC106398... 90 1e-33
gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Ar... 92 2e-33
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 107 3e-33
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 95 4e-33
ref|XP_013658035.1| PREDICTED: uncharacterized protein LOC106362... 112 5e-33
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 103 1e-32
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 96 1e-32
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 96 1e-32
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 93 2e-32
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 93 2e-32
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 93 2e-32
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 91 4e-32
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 92 4e-32
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 92 4e-32
emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera] 125 3e-26
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 108 bits (271), Expect(2) = 1e-38
Identities = 49/104 (47%), Positives = 66/104 (63%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W YP+ KSE L F F+ L EN TKI FQ+DG E V K GI R
Sbjct: 544 YSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHR 603
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAFFS 400
ISCP TP+QNGLAERKHRH+ E+G + +F++ P+++W ++FF+
Sbjct: 604 ISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFT 647
Score = 79.0 bits (193), Expect(2) = 1e-38
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F A Y+INR P+ +L N SPY+ L+ + PDYSSLRVFG CYP L +K P+S++
Sbjct: 645 FFTANYIINRLPSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQ 704
Query: 227 CIFIG 213
C+F+G
Sbjct: 705 CVFLG 709
>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
Length = 1453
Score = 107 bits (266), Expect(3) = 2e-37
Identities = 47/102 (46%), Positives = 64/102 (62%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
F W+YP+++KS+ F F+ L EN + TKI FQ+DG +E F++ GI +
Sbjct: 501 FTWLYPLKLKSDFFDIFLQFQKLVENQYSTKIKIFQSDGGAEFTSNRFQSHLQQFGIHHQ 560
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
+SCP TP QNG AERKHRH+TE G +F++ P YW DAF
Sbjct: 561 MSCPYTPSQNGRAERKHRHVTETGLALLFHSHVPPRYWVDAF 602
Score = 65.1 bits (157), Expect(3) = 2e-37
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F ATY+INR P P+L SP++VL+ P+Y + FG YP L K SP+S+
Sbjct: 602 FSTATYIINRLPLPVLGGLSPFEVLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLP 661
Query: 227 CIFIG 213
CIF+G
Sbjct: 662 CIFLG 666
Score = 32.3 bits (72), Expect(3) = 2e-37
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 222 FYWNSTLHKGYKCYDPISKRTIISRH 145
F S+ HKG++C+D + RT I+RH
Sbjct: 664 FLGYSSSHKGFRCFDTTTSRTYITRH 689
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 117 bits (292), Expect(2) = 9e-37
Identities = 51/104 (49%), Positives = 68/104 (65%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W YP++ KS+ F F+NL EN F TKI FQ+DG E L K CGIQ R
Sbjct: 547 YSWFYPLKAKSDFFAVFVAFQNLVENQFNTKIKVFQSDGGGEFTSNLMKKHLTDCGIQHR 606
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAFFS 400
ISCP TP+QNG+AERKHRH E+G + +F++ P ++W +AFF+
Sbjct: 607 ISCPYTPQQNGIAERKHRHFVELGLSMMFHSHTPLQFWVEAFFT 650
Score = 64.7 bits (156), Expect(2) = 9e-37
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F A++L N P+P L N SP + L P+Y+ LRVFG CYP L K P+S++
Sbjct: 648 FFTASFLSNMLPSPSLGNVSPLEALLKQKPNYAMLRVFGTACYPCLRPLGEHKFEPRSLQ 707
Query: 227 CIFIGIALYIKAISAM------IQFLKELSFQGM*FSLKMNFTFLL 108
C+F+G K + + + + F F K + FL+
Sbjct: 708 CVFLGYNSQYKGYRCLYPPTGRVYISRHVIFDEETFPFKQKYQFLV 753
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 98.2 bits (243), Expect(3) = 2e-36
Identities = 44/102 (43%), Positives = 60/102 (58%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
F W+YP++ KS+ F F+ EN +I FQ+DG +E FKA + GI +
Sbjct: 497 FTWLYPLKFKSDFFDIFLQFQKFVENQHSARIKVFQSDGGAEFTNTCFKAHLRTSGIHHQ 556
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
+SCP TP QNG AERKHRH+TE G +F++ +W DAF
Sbjct: 557 LSCPYTPAQNGRAERKHRHVTETGLALLFHSHLSPRFWVDAF 598
Score = 72.4 bits (176), Expect(3) = 2e-36
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F ATY+INR PTP+L KSP+++LY P Y + FG YP L +KLSP+SI
Sbjct: 598 FSTATYIINRLPTPLLGGKSPFELLYGXSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIP 657
Query: 227 CIFIG 213
CIF+G
Sbjct: 658 CIFLG 662
Score = 30.8 bits (68), Expect(3) = 2e-36
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 222 FYWNSTLHKGYKCYDPISKRTIISRH 145
F S HKG++C DP + R I+RH
Sbjct: 660 FLGYSPSHKGFRCLDPTTSRLYITRH 685
>emb|CBI36090.3| unnamed protein product [Vitis vinifera]
Length = 1273
Score = 100 bits (249), Expect(2) = 6e-34
Identities = 46/102 (45%), Positives = 61/102 (59%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
F W+YP++ KS+ F FK EN +I FQ+DG +E FKA + GI +
Sbjct: 1095 FTWLYPLKFKSDFFDIFLQFKKFVENQHFARIKVFQSDGGAEFTNTCFKAHLRTSGIHHQ 1154
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
+SCP TP QNG AERKHRH+TE G T +F++ +W DAF
Sbjct: 1155 LSCPYTPAQNGRAERKHRHVTETGLTLLFHSHLSPRFWVDAF 1196
Score = 71.6 bits (174), Expect(2) = 6e-34
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F ATY+INR PTP+L KSP+++LY P Y + FG YP L +KLSP+SI
Sbjct: 1196 FSTATYIINRLPTPLLGGKSPFELLYGYSPHYENFHPFGCRVYPCLRDYMPNKLSPRSIP 1255
Query: 227 CIFIG 213
CIF+G
Sbjct: 1256 CIFLG 1260
>ref|XP_013694300.1| PREDICTED: uncharacterized protein LOC106398265 [Brassica napus]
Length = 2006
Score = 89.7 bits (221), Expect(2) = 1e-33
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F+ A YLINR PTP L KSPYQ+L+N P+Y+ LRVFG +CYP+L +K SPKSI
Sbjct: 908 FITAVYLINRMPTPNLEKKSPYQILFNSVPNYTKLRVFGCLCYPWLRPYGANKFSPKSIP 967
Query: 227 CIFIGIAL 204
C+F+G +L
Sbjct: 968 CVFLGYSL 975
Score = 81.6 bits (200), Expect(2) = 1e-33
Identities = 43/102 (42%), Positives = 60/102 (58%)
Frame = -1
Query: 705 WIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIRIS 526
W+YP+++KS+ + F FK L EN F +KI +D E GL ++F GIQ S
Sbjct: 811 WLYPLKLKSQVIHLFPTFKALVENQFSSKIKTLYSDNGGEYT-GL-RSFLADHGIQHLTS 868
Query: 525 CPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAFFS 400
P TPE NG+AER+HRHI E + + +A P +YW AF +
Sbjct: 869 PPHTPEHNGIAERRHRHIVETEMSLLTHAKMPIKYWSYAFIT 910
Score = 89.7 bits (221), Expect(2) = 3e-25
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F+ A YLINR PTP L KSPYQ+L+N P+Y+ LRVFG +CYP+L +K SPKSI
Sbjct: 1340 FITAVYLINRMPTPNLEKKSPYQILFNSVPNYTKLRVFGCLCYPWLRPYGANKFSPKSIP 1399
Query: 227 CIFIGIAL 204
C+F+G +L
Sbjct: 1400 CVFLGYSL 1407
Score = 53.1 bits (126), Expect(2) = 3e-25
Identities = 37/101 (36%), Positives = 50/101 (49%)
Frame = -1
Query: 702 IYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIRISC 523
+Y MQ Q H++ L L I +D E GL ++F GIQ S
Sbjct: 1247 VYMMQPPGFVDQDKPHYEIL---LLWISIKTLYSDNGGEYT-GL-RSFLADHGIQHLTSP 1301
Query: 522 PKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAFFS 400
P TPE NG+AER+HRHI E + + +A P +YW AF +
Sbjct: 1302 PHTPEHNGIAERRHRHIVETEMSLLTHAKMPIKYWSYAFIT 1342
>gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Arabis alpina]
Length = 1203
Score = 92.0 bits (227), Expect(2) = 2e-33
Identities = 47/102 (46%), Positives = 60/102 (58%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W+YP+++KS+ + F FK L EN F TKI +D E + KAF S GI
Sbjct: 559 YTWMYPLKLKSQVKETFIAFKALVENRFNTKIKTLYSDNGGEFMA--LKAFLSSSGISHL 616
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
S P TPE NG++ERKHRHI E G T + +A PK YW AF
Sbjct: 617 TSPPHTPEHNGISERKHRHIVETGLTLLTHAKMPKTYWSYAF 658
Score = 78.6 bits (192), Expect(2) = 2e-33
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F ATYLINR PTP+L+ +SP Q L+ P+YS LRVFG +C+P+L T+KL +S
Sbjct: 658 FTTATYLINRMPTPVLDMESPVQKLFGSQPNYSKLRVFGCLCFPWLRPYNTNKLQDRSTP 717
Query: 227 CIFIG 213
CIFIG
Sbjct: 718 CIFIG 722
>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
putative protein [Arabidopsis thaliana]
Length = 1415
Score = 107 bits (268), Expect(2) = 3e-33
Identities = 47/104 (45%), Positives = 67/104 (64%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
F W YP+++KS+ F F+ + EN Q KI +FQ DG E + F + CGI+
Sbjct: 514 FTWFYPLRLKSDFFSVFLTFQKMVENQCQQKIASFQCDGGGEFISNQFVSHLAECGIRQL 573
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAFFS 400
ISCP TP+QNG+AERKHRHITE+G++ +F P+ W +AF++
Sbjct: 574 ISCPYTPQQNGIAERKHRHITELGSSMMFQGKVPQFLWVEAFYT 617
Score = 62.0 bits (149), Expect(2) = 3e-33
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNN-KSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSI 231
F + +L N P+ +L + KSPY+VL P Y+SLRVFG CYP L ++K PKS+
Sbjct: 615 FYTSNFLCNLLPSSVLKDQKSPYEVLMGKAPVYTSLRVFGCACYPNLRPYASNKFDPKSL 674
Query: 230 KCIFIG 213
C+F G
Sbjct: 675 LCVFTG 680
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 95.1 bits (235), Expect(2) = 4e-33
Identities = 49/102 (48%), Positives = 62/102 (60%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W+YP++ KS+ + F FKNL EN FQT+I F +D E V + +F GI
Sbjct: 550 YTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVA--LREYFSQHGISHL 607
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
S P TPE NGL+ERKHRHI E G T + +AS PK YW AF
Sbjct: 608 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAF 649
Score = 74.3 bits (181), Expect(2) = 4e-33
Identities = 34/68 (50%), Positives = 44/68 (64%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F A YLINR PTP+L +SP+Q L+ P+Y LRVFG CYP+L KL KS +
Sbjct: 649 FAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQ 708
Query: 227 CIFIGIAL 204
C+F+G +L
Sbjct: 709 CVFLGYSL 716
>ref|XP_013658035.1| PREDICTED: uncharacterized protein LOC106362726 [Brassica napus]
Length = 1062
Score = 112 bits (279), Expect(2) = 5e-33
Identities = 49/104 (47%), Positives = 68/104 (65%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
F W+YP+++KSE F+ F+ L EN F+ KI QTDG + V F + +CGI+
Sbjct: 467 FSWLYPLKLKSEVFATFKSFQCLVENQFERKIQILQTDGGGDFVNNQFASHLTNCGIKHY 526
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAFFS 400
+SCP TPEQNGLAERKHRH+ E+G + +F A P+ W +A F+
Sbjct: 527 LSCPHTPEQNGLAERKHRHLVELGMSMMFEAKMPQSLWVEALFT 570
Score = 57.0 bits (136), Expect(2) = 5e-33
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = -2
Query: 398 ATYLINRTP-TPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIKCI 222
A +L N P T + SPY+ L P YS+LRVFG CYP+L +K PKS+ C+
Sbjct: 571 ANFLTNLLPHTALGKTSSPYEKLNGFTPHYSALRVFGCCCYPYLRPYSQNKFDPKSLLCV 630
Query: 221 FIG 213
F+G
Sbjct: 631 FLG 633
Score = 53.1 bits (126), Expect(2) = 2e-06
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -2
Query: 350 SPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIKCIFIG 213
SPY+ L P YS+LRVFG CYP+L +K PKS+ C+F+G
Sbjct: 774 SPYEKLNGFTPHYSALRVFGCCCYPYLRPYSQNKFDPKSLLCVFLG 819
Score = 26.6 bits (57), Expect(2) = 2e-06
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 198 KGYKCYDPISKRTIISRHV 142
KGY+C P + R +SRHV
Sbjct: 825 KGYRCLHPPTGRVYLSRHV 843
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 103 bits (256), Expect(2) = 1e-32
Identities = 47/109 (43%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
F W +P+++KS+ + F ++ L EN TKI FQ+DG E K F GI R
Sbjct: 546 FSWFFPLRMKSKFISVFIAYQKLVENQLGTKIKEFQSDGGGEFTSNKLKEHFREHGIHHR 605
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAFFSC-YIS 388
ISCP TP+QNG+AERKHRH+ E+G + ++++ P ++W +AFF+ Y+S
Sbjct: 606 ISCPYTPQQNGVAERKHRHLVELGLSMLYHSHTPLKFWVEAFFTANYLS 654
Score = 64.7 bits (156), Expect(2) = 1e-32
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F A YL N P+ +L SPY+ L+ DY+ LRVFG CYP L +K P+S++
Sbjct: 647 FFTANYLSNLLPSSVLKEISPYETLFQQKVDYTPLRVFGTACYPCLRPLAKNKFDPRSLQ 706
Query: 227 CIFIG 213
C+F+G
Sbjct: 707 CVFLG 711
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 95.5 bits (236), Expect(2) = 1e-32
Identities = 49/102 (48%), Positives = 62/102 (60%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W+YP++ KS+ + F FKNL EN FQT+I F +D E V + +F GI
Sbjct: 536 YTWLYPLKQKSQVKETFITFKNLVENRFQTRIGTFYSDNGGEFVA--LREYFSQHGISHL 593
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
S P TPE NGL+ERKHRHI E G T + +AS PK YW AF
Sbjct: 594 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAF 635
Score = 72.4 bits (176), Expect(2) = 1e-32
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F A YLINR PTP+L +SP Q L+ P+Y LRVFG CYP+L KL KS +
Sbjct: 635 FAVAVYLINRLPTPLLQLESPCQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQ 694
Query: 227 CIFIGIAL 204
C+F+G +L
Sbjct: 695 CVFLGYSL 702
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 95.5 bits (236), Expect(2) = 1e-32
Identities = 49/102 (48%), Positives = 62/102 (60%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W+YP++ KS+ + F FKNL EN FQT+I F +D E V + +F GI
Sbjct: 536 YTWLYPLKQKSQVKETFITFKNLVENRFQTRIGTFYSDNGGEFVA--LREYFSQHGISHL 593
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
S P TPE NGL+ERKHRHI E G T + +AS PK YW AF
Sbjct: 594 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAF 635
Score = 72.4 bits (176), Expect(2) = 1e-32
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F A YLINR PTP+L +SP Q L+ P+Y LRVFG CYP+L KL KS +
Sbjct: 635 FAVAVYLINRLPTPLLQLESPCQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQ 694
Query: 227 CIFIGIAL 204
C+F+G +L
Sbjct: 695 CVFLGYSL 702
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 93.2 bits (230), Expect(2) = 2e-32
Identities = 49/102 (48%), Positives = 61/102 (59%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W+YP++ KS+ + F FKNL EN FQT+I F +D E V +F GI
Sbjct: 555 YTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVA--LWEYFSQHGISHL 612
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
S P TPE NGL+ERKHRHI E G T + +AS PK YW AF
Sbjct: 613 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAF 654
Score = 74.3 bits (181), Expect(2) = 2e-32
Identities = 34/68 (50%), Positives = 44/68 (64%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F A YLINR PTP+L +SP+Q L+ P+Y LRVFG CYP+L KL KS +
Sbjct: 654 FAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQ 713
Query: 227 CIFIGIAL 204
C+F+G +L
Sbjct: 714 CVFLGYSL 721
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 93.2 bits (230), Expect(2) = 2e-32
Identities = 49/102 (48%), Positives = 61/102 (59%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W+YP++ KS+ + F FKNL EN FQT+I F +D E V +F GI
Sbjct: 555 YTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVA--LWEYFSQHGISHL 612
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
S P TPE NGL+ERKHRHI E G T + +AS PK YW AF
Sbjct: 613 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAF 654
Score = 74.3 bits (181), Expect(2) = 2e-32
Identities = 34/68 (50%), Positives = 44/68 (64%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F A YLINR PTP+L +SP+Q L+ P+Y LRVFG CYP+L KL KS +
Sbjct: 654 FAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQ 713
Query: 227 CIFIGIAL 204
C+F+G +L
Sbjct: 714 CVFLGYSL 721
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 93.2 bits (230), Expect(2) = 2e-32
Identities = 49/102 (48%), Positives = 61/102 (59%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W+YP++ KS+ + F FKNL EN FQT+I F +D E V +F GI
Sbjct: 555 YTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVA--LWEYFSQHGISHL 612
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
S P TPE NGL+ERKHRHI E G T + +AS PK YW AF
Sbjct: 613 TSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAF 654
Score = 74.3 bits (181), Expect(2) = 2e-32
Identities = 34/68 (50%), Positives = 44/68 (64%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F A YLINR PTP+L +SP+Q L+ P+Y LRVFG CYP+L KL KS +
Sbjct: 654 FAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQ 713
Query: 227 CIFIGIAL 204
C+F+G +L
Sbjct: 714 CVFLGYSL 721
>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268438|emb|CAB80958.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1474
Score = 90.5 bits (223), Expect(2) = 4e-32
Identities = 48/102 (47%), Positives = 58/102 (56%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W+YP+Q KS+ F FK L EN FQ KI +D E + + F S GI
Sbjct: 556 YTWLYPLQQKSQVKSTFIAFKALVENRFQAKIRTLYSDNGGEFIA--LREFLVSNGISHL 613
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
S P TPE NGL+ERKHRHI E G T + AS P+EYW AF
Sbjct: 614 TSPPHTPEHNGLSERKHRHIVETGLTLLTQASVPREYWPYAF 655
Score = 75.5 bits (184), Expect(2) = 4e-32
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F AA YLINR PTP+L+ +SP+Q L+ P+Y LRVFG +C+P+L +KL +S +
Sbjct: 655 FAAAVYLINRMPTPVLSMESPFQKLFGSKPNYERLRVFGCLCFPWLRPYTHNKLEERSRR 714
Query: 227 CIFIGIAL 204
C+F+G +L
Sbjct: 715 CVFLGYSL 722
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 92.4 bits (228), Expect(2) = 4e-32
Identities = 46/102 (45%), Positives = 63/102 (61%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
F WIY ++ KSE + F+ F+ L E +F KI+A QTD E K +FF GI
Sbjct: 549 FTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQK--LNSFFAQIGIDHH 606
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
+SCP T +QNG AERKH+HI E+G + + AS P ++W +AF
Sbjct: 607 VSCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAF 648
Score = 73.6 bits (179), Expect(2) = 4e-32
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F+AATYLINR P+ + N +P + L+N PDYSSLRVF C+P L T KL +S +
Sbjct: 648 FVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQ 707
Query: 227 CIFIGIALYIK 195
C+F+G + + K
Sbjct: 708 CVFLGFSTHHK 718
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 92.4 bits (228), Expect(2) = 4e-32
Identities = 46/102 (45%), Positives = 63/102 (61%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
F WIY ++ KSE + F+ F+ L E +F KI+A QTD E K +FF GI
Sbjct: 549 FTWIYLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQK--LNSFFAQIGIDHH 606
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAF 406
+SCP T +QNG AERKH+HI E+G + + AS P ++W +AF
Sbjct: 607 VSCPHTHQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAF 648
Score = 73.6 bits (179), Expect(2) = 4e-32
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = -2
Query: 407 FLAATYLINRTPTPILNNKSPYQVLYNDFPDYSSLRVFGYICYPFLGQSRTDKLSPKSIK 228
F+AATYLINR P+ + N +P + L+N PDYSSLRVF C+P L T KL +S +
Sbjct: 648 FVAATYLINRIPSKTIQNSTPLEKLFNQKPDYSSLRVFSCTCWPHLHPYNTHKLQFRSKQ 707
Query: 227 CIFIGIALYIK 195
C+F+G + + K
Sbjct: 708 CVFLGFSTHHK 718
>emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]
Length = 1884
Score = 125 bits (314), Expect = 3e-26
Identities = 68/190 (35%), Positives = 92/190 (48%)
Frame = -1
Query: 711 FHWIYPMQVKSEALQCFQHFKNLTENLFQTKILAFQTDGASELVKGLFKAFFDSCGIQIR 532
+ W+YP++ KS+ +CF F+ L EN + +I FQ+DG E F+ CGI +
Sbjct: 494 YTWLYPLRRKSDFFECFLKFQILVENQLERRIKIFQSDGGGEFQSIKFQNHLSKCGILQQ 553
Query: 531 ISCPKTPEQNGLAERKHRHITEMGNT*IFNASCPKEYWYDAFFSCYISYK*DSNSYXXXX 352
+SCP TPEQNG+AERKHRHI EMG T +FNA P W DAF + ++
Sbjct: 554 VSCPGTPEQNGVAERKHRHIVEMGLTMLFNAKLPLSLWVDAFLTAVYLINRLPSTVLKME 613
Query: 351 XXXXXXXXXXXXXXXFKSFWVYLLSFFGSIKN**AISKIHKMYFYWNSTLHKGYKCYDPI 172
+ F + K + F S+LHKGY+C P
Sbjct: 614 SPFFMLFKQYPEYRSLRIFGCQCFPYLRDYGKNKFSPKTYPCVFIGYSSLHKGYRCLHPS 673
Query: 171 SKRTIISRHV 142
+KR ISRHV
Sbjct: 674 TKRVYISRHV 683