BLASTX nr result
ID: Papaver30_contig00051746
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00051746
(479 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449... 104 4e-25
ref|XP_008363252.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 90 9e-21
emb|CAN74172.1| hypothetical protein VITISV_013885 [Vitis vinifera] 84 3e-18
emb|CAN76535.1| hypothetical protein VITISV_034845 [Vitis vinifera] 86 1e-17
gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 74 3e-17
ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975... 82 3e-17
emb|CAN80110.1| hypothetical protein VITISV_013165 [Vitis vinifera] 76 3e-17
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 74 6e-17
emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera] 81 8e-17
gb|ABA99134.1| retrotransposon protein, putative, Ty1-copia subc... 75 2e-16
gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group] 76 3e-16
gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japo... 78 3e-16
emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group] 77 4e-16
emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera] 77 5e-16
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera] 73 6e-16
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc... 75 8e-16
gb|AAV32100.1| putative polyprotein [Oryza sativa Japonica Group] 75 8e-16
gb|ABF94664.1| retrotransposon protein, putative, Ty1-copia subc... 75 8e-16
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] 77 8e-16
gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group] ... 75 1e-15
>ref|XP_008387315.1| PREDICTED: uncharacterized protein LOC103449768 [Malus domestica]
Length = 2699
Score = 104 bits (260), Expect(2) = 4e-25
Identities = 51/88 (57%), Positives = 64/88 (72%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
+L+R+ Q DCKPA TS+D C L+KNKG +S LEYS+VIG LM LMN PD+AY VS+
Sbjct: 2498 ILRRFGQFDCKPAATSFDAGCKLEKNKGDAISQLEYSQVIGSLMYLMNSTRPDLAYAVSR 2557
Query: 247 LSGYNCSPEQENSDALSRVLWYLKYSFD 164
LS Y +P QE+ DAL +VL YLK + D
Sbjct: 2558 LSRYTSNPAQEHWDALVQVLRYLKNTLD 2585
Score = 36.6 bits (83), Expect(2) = 4e-25
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTL 66
G DANWI D+ ESKSTS Y FTL
Sbjct: 2599 GFSDANWISDTTESKSTSGYVFTL 2622
>ref|XP_008363252.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103426950 [Malus domestica]
Length = 724
Score = 89.7 bits (221), Expect(3) = 9e-21
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = -2
Query: 424 LKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKL 245
L++Y + K A T +D + LKKNKG +S EYS+VIG LM +MNC PDIAY VS+L
Sbjct: 189 LRKYGHLESKDAITPFDANSKLKKNKGDAISQREYSQVIGSLMYIMNCTRPDIAYSVSRL 248
Query: 244 SGYNCSPEQENSDALSRVLWYLKYSFD 164
S Y C+P ++ +AL RV+ YLK++ +
Sbjct: 249 SRYTCNPGHDHWEALIRVMRYLKHTMN 275
Score = 35.4 bits (80), Expect(3) = 9e-21
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTL 66
G DANWI DS ++KSTS Y FTL
Sbjct: 289 GFTDANWISDSTDTKSTSGYVFTL 312
Score = 21.6 bits (44), Expect(3) = 9e-21
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 471 NQTFISLSRSHYVELCLR 418
NQ L++SHY+E LR
Sbjct: 173 NQEGYILTQSHYIEATLR 190
>emb|CAN74172.1| hypothetical protein VITISV_013885 [Vitis vinifera]
Length = 406
Score = 83.6 bits (205), Expect(2) = 3e-18
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
+L+++ DCKP TSYD + LKKN+ V+ +EY+++IG LM LMNC P+IAY+V +
Sbjct: 276 ILRKFEHFDCKPMSTSYDPNTQLKKNRKHSVAQIEYAQIIGSLMYLMNCTRPNIAYVVGR 335
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS Y SP Q + + RV YL+
Sbjct: 336 LSQYTQSPNQVHWTVVHRVFKYLR 359
Score = 34.7 bits (78), Expect(2) = 3e-18
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTL 66
G DANWI DS+E KSTS Y F L
Sbjct: 377 GFSDANWISDSDEMKSTSGYVFIL 400
>emb|CAN76535.1| hypothetical protein VITISV_034845 [Vitis vinifera]
Length = 558
Score = 85.5 bits (210), Expect(2) = 1e-17
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
+L+++ DCKP T YD S LKKN+ V+ +EY+ +IG LM LMNC PDI Y+V +
Sbjct: 348 ILRKFEHFDCKPVSTLYDPSSQLKKNREHSVAQIEYAHIIGSLMYLMNCTRPDIIYVVGR 407
Query: 247 LSGYNCSPEQENSDALSRVLWYLKYSFD 164
LS Y +P Q++ + RVL YL+ + D
Sbjct: 408 LSRYTQNPNQDHWTVVRRVLKYLRGTID 435
Score = 30.8 bits (68), Expect(2) = 1e-17
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGF 72
G DANWI DS+E KS S Y F
Sbjct: 449 GFSDANWISDSDEIKSISGYVF 470
>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
Length = 1290
Score = 73.6 bits (179), Expect(2) = 3e-17
Identities = 35/88 (39%), Positives = 57/88 (64%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
+LK++ D K T YD + LKKN+G +S +Y+++IG L++LM+ PDIAY V +
Sbjct: 1024 LLKKFGYYDFKSVSTPYDANSKLKKNRGESISQTQYAQIIGSLLHLMSFSRPDIAYAVGR 1083
Query: 247 LSGYNCSPEQENSDALSRVLWYLKYSFD 164
LS P Q++ +AL+R++ YL+ + D
Sbjct: 1084 LSRCTQCPSQDHWEALARLMKYLRGTMD 1111
Score = 41.2 bits (95), Expect(2) = 3e-17
Identities = 25/46 (54%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFVVGRFPNKH-IAQFIMES 3
G DANWI DS+E+KSTS Y FTL G V R + IA+ MES
Sbjct: 1125 GYSDANWISDSDETKSTSGYVFTLGGGAVTWRSARQTIIARSTMES 1170
>ref|XP_012856116.1| PREDICTED: uncharacterized protein LOC105975464 [Erythranthe
guttatus]
Length = 1203
Score = 82.0 bits (201), Expect(2) = 3e-17
Identities = 42/89 (47%), Positives = 57/89 (64%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VL+++ D PA D L KN G V L+YS++IG LM +MNC PDIA+ VSK
Sbjct: 324 VLRKFKMFDSPPATIPIDLKIHLAKNCGEPVDQLKYSQIIGSLMYVMNCTRPDIAHSVSK 383
Query: 247 LSGYNCSPEQENSDALSRVLWYLKYSFDL 161
LS + +P ++ +AL+RVL YLKY+ DL
Sbjct: 384 LSRFTSNPRNDHWNALTRVLRYLKYTLDL 412
Score = 32.7 bits (73), Expect(2) = 3e-17
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTL 66
G DANWI D+++ KSTS Y FT+
Sbjct: 425 GYSDANWISDTKDYKSTSGYVFTI 448
>emb|CAN80110.1| hypothetical protein VITISV_013165 [Vitis vinifera]
Length = 811
Score = 76.3 bits (186), Expect(2) = 3e-17
Identities = 38/84 (45%), Positives = 52/84 (61%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
+L+++ DCK T YD S LKKN+ VS +EY+++I LM L NC PDIAY V +
Sbjct: 433 ILRKFEHFDCKLVSTPYDPSSKLKKNRELSVSQIEYAQIIRSLMYLTNCTKPDIAYTVGR 492
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS Y SP Q++ + RV YL+
Sbjct: 493 LSWYTQSPNQDHWITVRRVFKYLR 516
Score = 38.5 bits (88), Expect(2) = 3e-17
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = -1
Query: 173 LF*FMKGILLSLGLYDANWIVDSEESKSTSRYGFTLTCGFV 51
+F +++G + + G DANWI DS E KSTS Y FTL G V
Sbjct: 511 VFKYLRGTM-NYGFSDANWISDSYEMKSTSGYVFTLGGGAV 550
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 74.3 bits (181), Expect(3) = 6e-17
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
V+ R+ DCKP T YD S +L K +G V+ L YS++IG LM L + PDI+Y V +
Sbjct: 1053 VMTRFGHMDCKPVTTPYDPSYTLSKYEGEPVNQLLYSQIIGSLMYLSSATRPDISYAVCR 1112
Query: 247 LSGYNCSPEQENSDALSRVLWYLKYSFDL 161
L+ Y+ SP + AL RVL YLK + +L
Sbjct: 1113 LARYSASPGDRHWVALYRVLRYLKGAMNL 1141
Score = 38.5 bits (88), Expect(3) = 6e-17
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFVVGRFPNKHIA 21
G DANWI DS++ KSTS Y FTL G V R + ++
Sbjct: 1154 GFSDANWISDSDQMKSTSGYVFTLAGGAVSWRSSKQSVS 1192
Score = 20.8 bits (42), Expect(3) = 6e-17
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3
Query: 459 ISLSRSHYVE 430
I+LS+SHYVE
Sbjct: 1042 ITLSQSHYVE 1051
>emb|CAN83343.1| hypothetical protein VITISV_042274 [Vitis vinifera]
Length = 229
Score = 80.9 bits (198), Expect(2) = 8e-17
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
+L+++ DCKP T Y+ + LKKN+ V+ +EY+++IG LM LMNC PDIAY V K
Sbjct: 70 ILRKFEHFDCKPVSTPYNPNSQLKKNREHSVAQIEYAQIIGSLMYLMNCIRPDIAYAVGK 129
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS Y S Q++ + RVL YL+
Sbjct: 130 LSQYTQSSNQDHWTVVRRVLKYLR 153
Score = 32.7 bits (73), Expect(2) = 8e-17
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLT 63
G DANWI D +E KSTS Y F L+
Sbjct: 171 GFSDANWISDLDEMKSTSGYVFILS 195
>gb|ABA99134.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1083
Score = 75.5 bits (184), Expect(2) = 2e-16
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VL R+ SDCKPA T YD S L+KN+ L YS++IG LM L + PDI++ VSK
Sbjct: 827 VLSRFGYSDCKPAPTPYDSSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDISFAVSK 886
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS + +P ++ AL RV+ YLK
Sbjct: 887 LSRFVSNPGDDHWQALERVMRYLK 910
Score = 36.6 bits (83), Expect(2) = 2e-16
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFV 51
G D+NWI D++E K+TSRY FTL G V
Sbjct: 928 GYSDSNWISDADEIKATSRYVFTLGGGAV 956
>gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1342
Score = 75.9 bits (185), Expect(2) = 3e-16
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VL R+ SDCKP T YD S L+KN+ L YS++IG LM L + PDI++ VSK
Sbjct: 1086 VLSRFGYSDCKPVPTPYDPSVLLRKNQRIARDQLRYSQIIGSLMYLASATRPDISFAVSK 1145
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS + +PE ++ AL RV+ YLK
Sbjct: 1146 LSRFVSNPEDDHWQALKRVMRYLK 1169
Score = 35.8 bits (81), Expect(2) = 3e-16
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFV 51
G D+NWI D++E K+TS Y FTL G V
Sbjct: 1187 GYSDSNWISDADEIKATSEYAFTLGGGAV 1215
>gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
Length = 1028
Score = 77.8 bits (190), Expect(2) = 3e-16
Identities = 41/84 (48%), Positives = 54/84 (64%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VL R+ SDCKPA T YD S L+KN+ L YS++IG LM L + PDI++ VSK
Sbjct: 772 VLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDISFAVSK 831
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS + +PE ++ AL RV+ YLK
Sbjct: 832 LSRFVSNPEDDHWQALERVMRYLK 855
Score = 33.9 bits (76), Expect(2) = 3e-16
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFV 51
G D+NWI D++E K+TS Y FTL G V
Sbjct: 873 GYSDSNWISDADEIKATSGYVFTLGGGAV 901
>emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group]
Length = 1099
Score = 77.0 bits (188), Expect(2) = 4e-16
Identities = 41/84 (48%), Positives = 54/84 (64%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VL R+ SDCKPA TSYD S L+KN+ L YS++IG LM L + PDI++ VSK
Sbjct: 969 VLSRFGYSDCKPAPTSYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATMPDISFAVSK 1028
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS + +P ++ AL RV+ YLK
Sbjct: 1029 LSRFVSNPGDDHWQALERVMRYLK 1052
Score = 34.3 bits (77), Expect(2) = 4e-16
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFV 51
G D+NWI D++E K+TS Y FTL G V
Sbjct: 1070 GYSDSNWIFDADEIKATSGYVFTLGGGAV 1098
>emb|CAN73119.1| hypothetical protein VITISV_020442 [Vitis vinifera]
Length = 588
Score = 77.0 bits (188), Expect(2) = 5e-16
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = -2
Query: 421 KRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSKLS 242
K++ DCKP T YD + LKKN + +EY+++IG LM LMNC PDIAY + +LS
Sbjct: 324 KKFEHFDCKPMSTPYDPNSQLKKNMEHSXAQIEYAQIIGSLMYLMNCTKPDIAYAIGRLS 383
Query: 241 GYNCSPEQENSDALSRVLWYLK 176
SP Q++ + RVL YL+
Sbjct: 384 RNTQSPNQDHWTVVRRVLKYLR 405
Score = 33.9 bits (76), Expect(2) = 5e-16
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFVVGRFPNK-HIAQFIMES 3
G DANWI DS+E +STS Y F L V + + +IA+ ME+
Sbjct: 423 GFSDANWISDSDEMESTSGYVFILGGSLVSWKSAKQTYIARSTMEA 468
>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
Length = 839
Score = 73.2 bits (178), Expect(2) = 6e-16
Identities = 38/88 (43%), Positives = 54/88 (61%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
+LKR+NQ D P T D + KN G + LEYS++IG LM +MNC DIAY V+K
Sbjct: 683 ILKRFNQYDDSPIKTPVDLNLHSTKNNGPAIDQLEYSRIIGSLMYVMNCMCLDIAYAVNK 742
Query: 247 LSGYNCSPEQENSDALSRVLWYLKYSFD 164
LS + + +++ L RVL YL+Y+ +
Sbjct: 743 LSRFTNNMGKDHWKVLVRVLRYLRYTLN 770
Score = 37.4 bits (85), Expect(2) = 6e-16
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFVVGRFPNKH--IAQFIMES 3
G DANWI D ++SKSTS Y FT+ G + R +K IA+ MES
Sbjct: 784 GYSDANWIFDMKDSKSTSGYIFTIG-GVAISRKSSKQTCIARSTMES 829
>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1452
Score = 75.1 bits (183), Expect(2) = 8e-16
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VL R+ SDCKPA T YD S L+KN+ L YS++IG LM L + PDI++ VSK
Sbjct: 1196 VLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDISFAVSK 1255
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS + +P ++ AL RV+ YLK
Sbjct: 1256 LSRFVSNPGDDHWQALERVMRYLK 1279
Score = 35.0 bits (79), Expect(2) = 8e-16
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFV 51
G D+NWI D++E K+TS Y FTL G V
Sbjct: 1297 GYSDSNWISDADEIKATSGYAFTLGGGAV 1325
>gb|AAV32100.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1388
Score = 75.1 bits (183), Expect(2) = 8e-16
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VL R+ SDCKPA T YD S L+KN+ L YS++IG LM L + PDI++ VSK
Sbjct: 1132 VLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDISFAVSK 1191
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS + +P ++ AL RV+ YLK
Sbjct: 1192 LSRFVSNPGDDHWQALERVMRYLK 1215
Score = 35.0 bits (79), Expect(2) = 8e-16
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFV 51
G D+NWI D++E K+TS Y FTL G V
Sbjct: 1233 GYSDSNWISDADEIKATSGYAFTLGGGAV 1261
>gb|ABF94664.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1286
Score = 75.1 bits (183), Expect(2) = 8e-16
Identities = 40/84 (47%), Positives = 53/84 (63%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VL R+ SDCKPA T YD S L+KN+ L YS++IG LM L + PDI++ VSK
Sbjct: 1030 VLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDISFAVSK 1089
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS + +P ++ AL RV+ YLK
Sbjct: 1090 LSRFVSNPGDDHWQALERVMRYLK 1113
Score = 35.0 bits (79), Expect(2) = 8e-16
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFV 51
G D+NWI D++E K+TS Y FTL G V
Sbjct: 1131 GYSDSNWISDADEIKATSGYAFTLGGGAV 1159
>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
Length = 1264
Score = 77.0 bits (188), Expect(3) = 8e-16
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VLKR+ S+CKP+ T YD S +L+KNK G+ L YS+++G LM L PDI++ VSK
Sbjct: 1008 VLKRFGFSECKPSPTPYDPSVTLRKNKRIGLDQLRYSQIVGSLMYLAGATRPDISFAVSK 1067
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS + +P ++ AL RV+ YL+
Sbjct: 1068 LSRFMSNPGTDHWHALERVMRYLQ 1091
Score = 30.8 bits (68), Expect(3) = 8e-16
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFVVGR 42
G D+NWI D++E +TS Y FT+ G V R
Sbjct: 1109 GYSDSNWISDADELYATSGYVFTIGGGAVSWR 1140
Score = 21.9 bits (45), Expect(3) = 8e-16
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 459 ISLSRSHYVELCLR 418
I+LS+SHYVE L+
Sbjct: 997 ITLSQSHYVEKVLK 1010
>gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group]
gi|108708916|gb|ABF96711.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1456
Score = 74.7 bits (182), Expect(2) = 1e-15
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = -2
Query: 427 VLKRYNQSDCKPACTSYDYSCSLKKNKGSGVS*LEYSKVIGCLMNLMNCKSPDIAYIVSK 248
VL R+ SDCKPA T YD S L+KN+ L YS++IG LM L + PDI++ VSK
Sbjct: 1200 VLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPDISFAVSK 1259
Query: 247 LSGYNCSPEQENSDALSRVLWYLK 176
LS + +P + AL RV+ YLK
Sbjct: 1260 LSRFVSNPGDDQWQALERVMRYLK 1283
Score = 35.0 bits (79), Expect(2) = 1e-15
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1
Query: 137 GLYDANWIVDSEESKSTSRYGFTLTCGFV 51
G D+NWI D++E K+TS Y FTL G V
Sbjct: 1301 GYSDSNWISDADEIKATSGYAFTLGGGAV 1329