BLASTX nr result

ID: Papaver30_contig00051560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00051560
         (425 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013454715.1| F-box and associated interaction domain prot...    58   3e-06
ref|XP_012460771.1| PREDICTED: F-box protein CPR30-like [Gossypi...    56   9e-06

>ref|XP_013454715.1| F-box and associated interaction domain protein [Medicago
           truncatula] gi|657386410|gb|KEH28746.1| F-box and
           associated interaction domain protein [Medicago
           truncatula]
          Length = 419

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
 Frame = +2

Query: 227 RDAYKHGNDSPSDLTL------NILTRLPADSVIQCKQVCKTWKDLLCQPSFPQAHLLHQ 388
           R  + H N SP  +TL       IL+RLP  S+IQ K VCK+WK L+  PSF + HL H 
Sbjct: 4   RHLHSHSNPSPPSVTLPDEVLTEILSRLPVKSLIQMKSVCKSWKTLISHPSFIKIHLNHS 63

Query: 389 LN 394
           L+
Sbjct: 64  LS 65


>ref|XP_012460771.1| PREDICTED: F-box protein CPR30-like [Gossypium raimondii]
           gi|823256248|ref|XP_012460772.1| PREDICTED: F-box
           protein CPR30-like [Gossypium raimondii]
           gi|763808762|gb|KJB75664.1| hypothetical protein
           B456_012G050800 [Gossypium raimondii]
           gi|763808763|gb|KJB75665.1| hypothetical protein
           B456_012G050800 [Gossypium raimondii]
          Length = 385

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 25/50 (50%), Positives = 32/50 (64%)
 Frame = +2

Query: 251 DSPSDLTLNILTRLPADSVIQCKQVCKTWKDLLCQPSFPQAHLLHQLNGN 400
           D P +L L IL RLPA+S+++CK VCK W  L+  P F Q HL +  N N
Sbjct: 6   DLPRELFLEILLRLPAESLMRCKYVCKYWHSLITNPKFIQLHLNYNYNNN 55


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