BLASTX nr result

ID: Papaver30_contig00050437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00050437
         (909 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010683350.1| PREDICTED: uncharacterized protein LOC104898...    60   2e-06

>ref|XP_010683350.1| PREDICTED: uncharacterized protein LOC104898043 [Beta vulgaris
           subsp. vulgaris] gi|870855474|gb|KMT07207.1|
           hypothetical protein BVRB_6g155290 [Beta vulgaris subsp.
           vulgaris]
          Length = 180

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
 Frame = -1

Query: 618 SNNKKKQNAICQQTMKIVVNVIKLSSITLASMSLRRTKPTSHATTAIAPSHLSMGKHEPS 439
           S   K + ++C+++M + VN++KLSS++LA    RRT  TS +      +H     H+ S
Sbjct: 4   SMKSKDRKSLCEESMLVFVNILKLSSLSLA----RRTLVTSSSDNDDDYNH---HHHQVS 56

Query: 438 TMTKLAMGNTQGVAYSPPL-----VKLNSGSRLMSLKKPSDMNNSKLSSYVVP----EAS 286
              K A  N + V ++  +     +K + GS+    +KP     SKLS  ++P    E +
Sbjct: 57  VPKKKATNNQKVVHHNTHVPESQRIKKSKGSK--RSQKPEQPPESKLSYVMLPEHDHEIT 114

Query: 285 TVGEKGS---SSLYKKIDQEPQRKMSRNVDSEASSFIRRFHEKNRK 157
           TV  K S      ++K +++ Q  +   ++ +A+++I+RFHEKN K
Sbjct: 115 TVDGKFSDYIKGFHEKTEKDLQNAI---LEGKAANYIKRFHEKNMK 157


Top