BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00049467
         (776 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   172   8e-56
emb|CDP17738.1| unnamed protein product [Coffea canephora]            170   3e-55
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   169   9e-55
ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905...   136   6e-41
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   136   6e-40
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     124   4e-37
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        124   8e-37
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   128   4e-36
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                123   4e-36
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]               123   4e-36
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   123   8e-36
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  121   8e-36
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     123   8e-36
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              115   7e-35
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              115   7e-35
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              115   9e-35
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              115   1e-34
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   115   3e-34
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   115   3e-34
ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766...   132   3e-34

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  172 bits (436), Expect(2) = 8e-56
 Identities = 86/176 (48%), Positives = 117/176 (66%)
 Frame = -3

Query: 702 AYDECSFCH*TRHWKKDCPKARNKDKKNLDVNVAEIKFGAIEDDEYDKFSMTVHDSALVA 523
           A DEC+FCH   HWKKDCPK + K+K   D NVAE K     D E D   +    ++L  
Sbjct: 167 AKDECAFCHEKGHWKKDCPKLQKKEKVLQDANVAECK----SDVESDISLIVSLSASLYL 222

Query: 522 DTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGVVQE 343
           D  + I+D   +YHMCP +DWF +F++ DG  V+MGN+N CK  GIG I+L+ +DG  + 
Sbjct: 223 D--EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRI 280

Query: 342 LEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLKHGNLYFLQ 175
           L DVRYVP+LKKNLIS+G L+S+G  +T++ G+LK  S  LV++KG+   NLY+ Q
Sbjct: 281 LRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQ 336



 Score = 73.2 bits (178), Expect(2) = 8e-56
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = -2

Query: 157 AAVSDSVESDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           A  S   +++ TKLWHMRLGH+GEKSL+    QGLLKGTK+C   FCEHCV
Sbjct: 347 ATSSSKKDAEATKLWHMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCV 397


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  170 bits (431), Expect(2) = 3e-55
 Identities = 85/176 (48%), Positives = 118/176 (67%)
 Frame = -3

Query: 702 AYDECSFCH*TRHWKKDCPKARNKDKKNLDVNVAEIKFGAIEDDEYDKFSMTVHDSALVA 523
           A DEC+FC    HWKKDCPK + K K   DVNVAE K  A  D     FS+ V  S L +
Sbjct: 252 AKDECAFCREKGHWKKDCPKLKKKGKAPQDVNVAECKSDAESD-----FSLAV--SRLTS 304

Query: 522 DTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGVVQE 343
              + I+D   +YHM P ++WF +FE+ DG  V+MGN+N CK  GIG I+L+ +DG  + 
Sbjct: 305 HPDEWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRI 364

Query: 342 LEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLKHGNLYFLQ 175
           L+DVRYVP LK++LIS+G L+S+G E+ ++ G+LKV S  L+++KG++  NLY+ Q
Sbjct: 365 LKDVRYVPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLKGVRKNNLYYYQ 420



 Score = 73.2 bits (178), Expect(2) = 3e-55
 Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
 Frame = -2

Query: 184 FSASVSEGIAAVSDSVES----DTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFC 17
           +  S   G AAV+ S  S    + TKLWHMRLG +GEKSL++L  QGLLKGTK C   FC
Sbjct: 419 YQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGDAGEKSLQNLAKQGLLKGTKVCKLEFC 478

Query: 16  EHCV 5
           EHCV
Sbjct: 479 EHCV 482


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  169 bits (428), Expect(2) = 9e-55
 Identities = 85/178 (47%), Positives = 116/178 (65%)
 Frame = -3

Query: 708 IPAYDECSFCH*TRHWKKDCPKARNKDKKNLDVNVAEIKFGAIEDDEYDKFSMTVHDSAL 529
           + A DEC+FCH   HWKKDCPK + K+K   D NVAE K      D     S+ V  SA 
Sbjct: 164 VVAKDECAFCHEKGHWKKDCPKLQKKEKVPQDANVAECK-----SDVESDISLIVSLSAS 218

Query: 528 VADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGVV 349
            +   + I+D   +YHMCP +DWF +F++ DG  V+MGN+N CK  GIG I+L+ +DG  
Sbjct: 219 -SYPDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGST 277

Query: 348 QELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLKHGNLYFLQ 175
           + L DVRYVP+LKKNLIS+G L+S+G  +T++ G+LK     LV++KG+   NLY+ Q
Sbjct: 278 RILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATLGALVMLKGVMKNNLYYYQ 335



 Score = 72.8 bits (177), Expect(2) = 9e-55
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = -2

Query: 157 AAVSDSVESDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           A  S   +++  KLWHMRLGH+GEKSL+ L  QGLLKGTK+C   FCEHCV
Sbjct: 346 ATSSSKKDAEAAKLWHMRLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCV 396


>ref|XP_010692517.1| PREDICTED: uncharacterized protein LOC104905624 [Beta vulgaris
           subsp. vulgaris]
          Length = 2676

 Score =  136 bits (342), Expect(2) = 6e-41
 Identities = 74/179 (41%), Positives = 103/179 (57%), Gaps = 7/179 (3%)
 Frame = -3

Query: 690 CSFCH*TRHWKKDCPKARNKD-------KKNLDVNVAEIKFGAIEDDEYDKFSMTVHDSA 532
           C++CH   H K +C K +NK        K    +N A++ +   + +            A
Sbjct: 235 CNYCHLKGHIKSECYKLKNKQSGDSKPRKGKEPMNSADVSYVDFDSES----------GA 284

Query: 531 LVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGV 352
           L    ++ IMD   S+H+ P KD F  +E+F+G  V MGNN TCKV GIG + + M DG 
Sbjct: 285 LDVSKSEWIMDSGCSFHVTPYKDMFTSYEEFNGGTVTMGNNATCKVVGIGSVDITMFDGT 344

Query: 351 VQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLKHGNLYFLQ 175
           V+ L  VR+VPE+KKNLIS+G LD+ G +   +GGVL V    LV+MKG+K G+LY LQ
Sbjct: 345 VRTLSKVRHVPEMKKNLISLGTLDNNGCKYIAEGGVLNVIRGALVLMKGIKRGSLYVLQ 403



 Score = 59.7 bits (143), Expect(2) = 6e-41
 Identities = 31/62 (50%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
 Frame = -2

Query: 187 VFSASVSEGIAAVSDSVESDT-TKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEH 11
           V   S+  G A VS    SD  TKLWH+RLGH GE  +  L  QGLL+  K  +  FCEH
Sbjct: 401 VLQGSMVSGSANVSTGTMSDDDTKLWHLRLGHMGEHGMSELCKQGLLENVKLDNLGFCEH 460

Query: 10  CV 5
           CV
Sbjct: 461 CV 462


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  136 bits (343), Expect(2) = 6e-40
 Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 6/180 (3%)
 Frame = -3

Query: 696 DECSFCH*TRHWKKDCPKARNK-DKKNLDVNVAEIKFGAIEDDEYDKFSMTVHDSALVAD 520
           D C++C    HWK DCPK + + +K+++   VAE      ED   ++      D ALVAD
Sbjct: 223 DVCNYCKEKGHWKFDCPKKKKQSEKQSVSAAVAE------EDTNSEE------DIALVAD 270

Query: 519 -----TTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDG 355
                +   ++D  ASYH+CPR++WF  +E+ DG  + M N++ CKV G G I+++ +DG
Sbjct: 271 EHTHHSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVGTGSIKIRTHDG 330

Query: 354 VVQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLKHGNLYFLQ 175
               L +VR+VP + KNLIS+  LDS+GF  + K GVL+V     +++KG+  G LYFLQ
Sbjct: 331 SFCTLNEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILKGVMRGTLYFLQ 390



 Score = 55.8 bits (133), Expect(2) = 6e-40
 Identities = 26/50 (52%), Positives = 33/50 (66%)
 Frame = -2

Query: 154 AVSDSVESDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           A S+  + D TKLWH+RLGH GE+ ++ L  + LL G K  S  FCEHCV
Sbjct: 401 ASSEFHQKDMTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCV 450


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  124 bits (312), Expect(2) = 4e-37
 Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 5/180 (2%)
 Frame = -3

Query: 699 YDECSFCH*TRHWKKDCPKARNKDKKNLDV----NVAEIKFGAIEDDEYDKFSMTVHDSA 532
           Y  C +C    H   +C K ++KDK+           E    A+  DE     + V  + 
Sbjct: 142 YKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAG 201

Query: 531 LVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGV 352
               + Q I+D A +YHMCP +DWF  +E   G  V MG++  C+V GIG +++KM DG 
Sbjct: 202 CAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGC 261

Query: 351 VQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKG-LKHGNLYFLQ 175
           ++ L DVR++P LK++LIS+  LD +G++ +   G+LKV    LVVMK  +K+ NLY L+
Sbjct: 262 IRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLR 321



 Score = 58.5 bits (140), Expect(2) = 4e-37
 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = -2

Query: 160 IAAVSDSVE-SDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           +AAVSDS+  SD T LWHMRLGH  E  L  L  +GLL G       FCEHC+
Sbjct: 329 VAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCI 381


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  124 bits (310), Expect(2) = 8e-37
 Identities = 68/180 (37%), Positives = 99/180 (55%), Gaps = 5/180 (2%)
 Frame = -3

Query: 699 YDECSFCH*TRHWKKDCPKARNKDKKNLDV----NVAEIKFGAIEDDEYDKFSMTVHDSA 532
           Y  C +C    H    C K ++KDK+           E    A+  DE     + V  + 
Sbjct: 233 YKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDAELLVAYAG 292

Query: 531 LVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGV 352
               + Q I+D A +YHMCP +DWF  +E   G  V MG++  C+V GIG +++KM DG 
Sbjct: 293 CAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGC 352

Query: 351 VQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMK-GLKHGNLYFLQ 175
           ++ L DVR++P LK++LIS+  LD +G++ +   G+LKV    LVVMK  +K  NLY LQ
Sbjct: 353 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQ 412



 Score = 58.2 bits (139), Expect(2) = 8e-37
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = -2

Query: 160 IAAVSDSVE-SDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKL-FCEHCV 5
           +A VSDS+  SD T LWHMRLGH  E  L  L  +GLL G +S SKL FCEHC+
Sbjct: 420 VATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDG-QSISKLKFCEHCI 472


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  128 bits (321), Expect(2) = 4e-36
 Identities = 68/180 (37%), Positives = 99/180 (55%), Gaps = 5/180 (2%)
 Frame = -3

Query: 699 YDECSFCH*TRHWKKDCPKARNKDKKNLDVNVA----EIKFGAIEDDEYDKFSMTVHDSA 532
           Y  C +C    H   DC K +NK+K   +        E    A+  D      + V  + 
Sbjct: 175 YKSCKYCKRGGHDISDCWKLQNKEKHKGNYKPKGKQEEQGKAAVATDNKPDAELLVAYAG 234

Query: 531 LVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGV 352
            V  + + ++D   +YHMCP +DWF  +E   G  V MG+N  CKV G+G I++KM DG 
Sbjct: 235 CVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGC 294

Query: 351 VQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKG-LKHGNLYFLQ 175
           ++ L DVR++P LK+NLIS+  LD +G+  +   G+LKV    LVVMK  +K+ +LY LQ
Sbjct: 295 IRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVMKADIKNADLYHLQ 354



 Score = 51.6 bits (122), Expect(2) = 4e-36
 Identities = 25/52 (48%), Positives = 32/52 (61%)
 Frame = -2

Query: 160 IAAVSDSVESDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           +AAV+DS+ +  + LWHMRLGH  E  L  L  +GLL G       FCEHC+
Sbjct: 362 VAAVTDSLSN--SDLWHMRLGHMSEIGLAELSKRGLLDGQNIGKLKFCEHCI 411


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  123 bits (308), Expect(2) = 4e-36
 Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 6/181 (3%)
 Frame = -3

Query: 699 YDECSFCH*TRHWKKDCPKARNKDKKN-----LDVNVAEIKFGAIEDDEYDKFSMTVHDS 535
           Y  C +C    H    C K ++KDK+            E K   + D++ D   + V  +
Sbjct: 218 YKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDA-ELLVAYA 276

Query: 534 ALVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDG 355
                + Q I+D A +YHMCP +DWF  +E   G  V MG++  C+V GIG +++KM DG
Sbjct: 277 GCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDG 336

Query: 354 VVQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKG-LKHGNLYFL 178
            ++ L DVR++P LK++LIS+  LD +G++ +   G+LKV    LVVMK  +K  NLY L
Sbjct: 337 CIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHL 396

Query: 177 Q 175
           Q
Sbjct: 397 Q 397



 Score = 56.6 bits (135), Expect(2) = 4e-36
 Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = -2

Query: 160 IAAVSDSVE-SDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           +A VSDS+  SD T LWHMRLGH  E  L  L  +GLL G       FCEHC+
Sbjct: 405 VATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCI 457


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score =  123 bits (308), Expect(2) = 4e-36
 Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 6/181 (3%)
 Frame = -3

Query: 699 YDECSFCH*TRHWKKDCPKARNKDKKN-----LDVNVAEIKFGAIEDDEYDKFSMTVHDS 535
           Y  C +C    H    C K ++KDK+            E K   + D++ D   + V  +
Sbjct: 50  YKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEDEGKAAVVTDEKSDA-ELLVAYA 108

Query: 534 ALVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDG 355
                + Q I+D A +YHMCP +DWF  +E   G  V MG++  C+V GIG +++KM DG
Sbjct: 109 GCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDG 168

Query: 354 VVQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKG-LKHGNLYFL 178
            ++ L DVR++P LK++LIS+  LD +G++ +   G+LKV    LVVMK  +K  NLY L
Sbjct: 169 CIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHL 228

Query: 177 Q 175
           Q
Sbjct: 229 Q 229



 Score = 56.6 bits (135), Expect(2) = 4e-36
 Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = -2

Query: 160 IAAVSDSVE-SDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           +A VSDS+  SD T LWHMRLGH  E  L  L  +GLL G       FCEHC+
Sbjct: 237 VATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCI 289


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  123 bits (308), Expect(2) = 8e-36
 Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 5/180 (2%)
 Frame = -3

Query: 699 YDECSFCH*TRHWKKDCPKARNKDKKNLDV----NVAEIKFGAIEDDEYDKFSMTVHDSA 532
           Y  C +C    H   +C K ++KDK+           E    A+  DE     + V  + 
Sbjct: 268 YKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAG 327

Query: 531 LVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGV 352
               + Q I+D A +YHMCP +DWF  +E   G  V MG++  C+V GIG +++KM DG 
Sbjct: 328 CAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGY 387

Query: 351 VQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKG-LKHGNLYFLQ 175
           ++ L DVR++P LK++LIS+  LD +G++ +   G+LKV    LVVMK  +K  NLY L+
Sbjct: 388 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 447



 Score = 55.5 bits (132), Expect(2) = 8e-36
 Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = -2

Query: 160 IAAVSDSVE-SDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           +AAVSDS+  SD T LWHMRLGH  E  L  L  + LL G       FCEHC+
Sbjct: 455 VAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCI 507


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  121 bits (304), Expect(2) = 8e-36
 Identities = 65/176 (36%), Positives = 103/176 (58%), Gaps = 4/176 (2%)
 Frame = -3

Query: 693 ECSFCH*TRHWKKDCPKARNKDKKNLDVNVAEIKFGAIEDDE---YDKFSMTVHDSALVA 523
           +C  C    H KKDC   +   +K+ + + ++    +  DD    Y + +++      + 
Sbjct: 229 KCYNCGKRGHLKKDCWSNKKSGEKSSEASTSQGCVASTSDDGEVLYSEAAVSTKGKNRLT 288

Query: 522 DTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGVVQE 343
           D    I+D  A++HM PR+DWF  +E      VFMGN++  ++ GIG +++KM DG ++ 
Sbjct: 289 DVW--IVDSGATWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMYDGTIRT 346

Query: 342 LEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLK-HGNLYFL 178
           L++VR+V EL KNL+SVG+LD  G++  ++GG+LKV    LVVMK  K   NLY L
Sbjct: 347 LQEVRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVAANLYML 402



 Score = 57.0 bits (136), Expect(2) = 8e-36
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = -2

Query: 202 ETWKLVFSASVSEGIAAVSDSVESDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKL 23
           +TW++   ASV+ G        + +TT +WH RLGH  E+ LK L  + L+ G KS S  
Sbjct: 405 DTWQMA-DASVAVGS-------QEETTMMWHRRLGHMSERGLKVLAERNLIPGLKSVSLP 456

Query: 22  FCEHCV 5
           FCEHCV
Sbjct: 457 FCEHCV 462


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  123 bits (308), Expect(2) = 8e-36
 Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 5/180 (2%)
 Frame = -3

Query: 699 YDECSFCH*TRHWKKDCPKARNKDKKNLDV----NVAEIKFGAIEDDEYDKFSMTVHDSA 532
           Y  C +C    H   +C K ++KDK+           E    A+  DE     + V  + 
Sbjct: 268 YKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEEEGKAAVVTDEKSDTELLVAYAG 327

Query: 531 LVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGV 352
               + Q I+D A +YHMCP +DWF  +E   G  V MG++  C+V GIG +++KM DG 
Sbjct: 328 CAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGY 387

Query: 351 VQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKG-LKHGNLYFLQ 175
           ++ L DVR++P LK++LIS+  LD +G++ +   G+LKV    LVVMK  +K  NLY L+
Sbjct: 388 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 447



 Score = 55.5 bits (132), Expect(2) = 8e-36
 Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = -2

Query: 160 IAAVSDSVE-SDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           +AAVSDS+  SD T LWHMRLGH  E  L  L  + LL G       FCEHC+
Sbjct: 455 VAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCI 507


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  115 bits (289), Expect(2) = 7e-35
 Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
 Frame = -3

Query: 693 ECSFCH*TRHWKKDCPKARNKDKKNLDVNVAEIKFGAIEDDE---YDKFSMTVHDSALVA 523
           +C  C    H KK+C   +   +KN + + ++    +  DD    Y + + +      + 
Sbjct: 229 KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLN 288

Query: 522 DTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGVVQE 343
           D    IMD  A++HM P +DWF  +E      V+MGN++  ++ G+G IRLKM+DG V++
Sbjct: 289 DVW--IMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRK 346

Query: 342 LEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLK-HGNLYFL 178
           ++ VR+V  LKKNL+SVG+LD  G ++  + G+LKV    LVVMK  K   NLY L
Sbjct: 347 IQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYML 402



 Score = 59.7 bits (143), Expect(2) = 7e-35
 Identities = 25/62 (40%), Positives = 40/62 (64%)
 Frame = -2

Query: 190 LVFSASVSEGIAAVSDSVESDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEH 11
           ++   ++ E  A+V+ + + +TT +WH RLGH  E+ LK L+ + LL G K+ +  FCEH
Sbjct: 401 MLLGDTLQEADASVAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEH 460

Query: 10  CV 5
           CV
Sbjct: 461 CV 462


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  115 bits (289), Expect(2) = 7e-35
 Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
 Frame = -3

Query: 693 ECSFCH*TRHWKKDCPKARNKDKKNLDVNVAEIKFGAIEDDE---YDKFSMTVHDSALVA 523
           +C  C    H KK+C   +   +KN + + ++    +  DD    Y + + +      + 
Sbjct: 229 KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLN 288

Query: 522 DTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGVVQE 343
           D    IMD  A++HM P +DWF  +E      V+MGN++  ++ G+G IRLKM+DG V++
Sbjct: 289 DVW--IMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRK 346

Query: 342 LEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLK-HGNLYFL 178
           ++ VR+V  LKKNL+SVG+LD  G ++  + G+LKV    LVVMK  K   NLY L
Sbjct: 347 IQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYML 402



 Score = 59.7 bits (143), Expect(2) = 7e-35
 Identities = 25/62 (40%), Positives = 40/62 (64%)
 Frame = -2

Query: 190 LVFSASVSEGIAAVSDSVESDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEH 11
           ++   ++ E  A+V+ + + +TT +WH RLGH  E+ LK L+ + LL G K+ +  FCEH
Sbjct: 401 MLLGDTLQEADASVAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEH 460

Query: 10  CV 5
           CV
Sbjct: 461 CV 462


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  115 bits (289), Expect(2) = 9e-35
 Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
 Frame = -3

Query: 693 ECSFCH*TRHWKKDCPKARNKDKKNLDVNVAEIKFGAIEDDE---YDKFSMTVHDSALVA 523
           +C  C    H KK+C   +   +KN + + ++    +  DD    Y + + +      + 
Sbjct: 229 KCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDDGEILYSEAATSSKGERRLN 288

Query: 522 DTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGVVQE 343
           D    IMD  A++HM P +DWF  +E      V+MGN++  ++ G+G IRLKM+DG V++
Sbjct: 289 DVW--IMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRK 346

Query: 342 LEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLK-HGNLYFL 178
           ++ VR+V  LKKNL+SVG+LD  G ++  + G+LKV    LVVMK  K   NLY L
Sbjct: 347 IQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYML 402



 Score = 59.3 bits (142), Expect(2) = 9e-35
 Identities = 26/62 (41%), Positives = 39/62 (62%)
 Frame = -2

Query: 190 LVFSASVSEGIAAVSDSVESDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEH 11
           ++   ++ E  A+V+ S + +TT +WH RLGH  E+ LK L  + LL G K+ +  FCEH
Sbjct: 401 MLLGDTLQEADASVAASSQEETTMMWHQRLGHMSERGLKVLAERNLLHGLKAVNLPFCEH 460

Query: 10  CV 5
           CV
Sbjct: 461 CV 462


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  115 bits (287), Expect(2) = 1e-34
 Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
 Frame = -3

Query: 693 ECSFCH*TRHWKKDCPKARNKDKKNLDVNVAEIKFGAIEDDE---YDKFSMTVHDSALVA 523
           +C  C    H KK+C   +   +KN +   ++    +  DD    Y + + +      + 
Sbjct: 229 KCYGCGMKGHVKKECWNNKKNGEKNSEATTSQGCVASTSDDGEILYSEAATSSEGERQLN 288

Query: 522 DTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGVVQE 343
           D    IMD  A++HM P +DWF  +E      V+MGN++  ++ G+G IRLKM+DG V++
Sbjct: 289 DVW--IMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRK 346

Query: 342 LEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLK-HGNLYFL 178
           ++ VR+V  LKKNL+SVG+LD  G ++  + G+LKV    LVVMK  K   NLY L
Sbjct: 347 IQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVVMKAEKITSNLYML 402



 Score = 59.7 bits (143), Expect(2) = 1e-34
 Identities = 25/62 (40%), Positives = 40/62 (64%)
 Frame = -2

Query: 190 LVFSASVSEGIAAVSDSVESDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEH 11
           ++   ++ E  A+V+ + + +TT +WH RLGH  E+ LK L+ + LL G K+ +  FCEH
Sbjct: 401 MLLGDTLQEADASVAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEH 460

Query: 10  CV 5
           CV
Sbjct: 461 CV 462


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score =  115 bits (289), Expect(2) = 3e-34
 Identities = 65/180 (36%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
 Frame = -3

Query: 699 YDECSFCH*TRHWKKDCPKARNKDKKNLDV----NVAEIKFGAIEDDEYDKFSMTVHDSA 532
           Y  C +C    H   +C K  +KDK+           E    A+  DE     + V  + 
Sbjct: 440 YKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAG 499

Query: 531 LVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGV 352
               + Q I++ A  YHMCP +DWF  +E      V MG++  C+V GIG +++KM DG 
Sbjct: 500 CAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGC 559

Query: 351 VQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKG-LKHGNLYFLQ 175
           ++ L DVR++P LK++LIS+  LD +G++ +   G+LKV    LVVMK  +K  NLY L+
Sbjct: 560 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 619



 Score = 57.8 bits (138), Expect(2) = 3e-34
 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = -2

Query: 160 IAAVSDSVE-SDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           +AAVSDS+  SD T LWHMRLGH  E  L  L  +GLL G       FCEHC+
Sbjct: 627 VAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCI 679


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  115 bits (289), Expect(2) = 3e-34
 Identities = 65/180 (36%), Positives = 97/180 (53%), Gaps = 5/180 (2%)
 Frame = -3

Query: 699 YDECSFCH*TRHWKKDCPKARNKDKKNLDV----NVAEIKFGAIEDDEYDKFSMTVHDSA 532
           Y  C +C    H   +C K  +KDK+           E    A+  DE     + V  + 
Sbjct: 233 YKSCKYCKRDGHDIFECWKLHDKDKRTGKYVPKGKKEEEGKAAVVTDEKSDAELLVAYAG 292

Query: 531 LVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGV 352
               + Q I++ A  YHMCP +DWF  +E      V MG++  C+V GIG +++KM DG 
Sbjct: 293 CAQTSDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGC 352

Query: 351 VQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKG-LKHGNLYFLQ 175
           ++ L DVR++P LK++LIS+  LD +G++ +   G+LKV    LVVMK  +K  NLY L+
Sbjct: 353 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLR 412



 Score = 57.8 bits (138), Expect(2) = 3e-34
 Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = -2

Query: 160 IAAVSDSVE-SDTTKLWHMRLGHSGEKSLKHLISQGLLKGTKSCSKLFCEHCV 5
           +AAVSDS+  SD T LWHMRLGH  E  L  L  +GLL G       FCEHC+
Sbjct: 420 VAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCI 472


>ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766925 [Gossypium
           raimondii]
          Length = 217

 Score =  132 bits (332), Expect(2) = 3e-34
 Identities = 60/118 (50%), Positives = 84/118 (71%)
 Frame = -3

Query: 531 LVADTTQ*IMDCAASYHMCPRKDWFVKFEKFDGPRVFMGNNNTCKVEGIGKIRLKMNDGV 352
           +   T + I+D   +YHMCP KDWF   ++ +G  VFMGN++ CK  G+G I+LK +DG+
Sbjct: 1   MACHTDEWILDLGCTYHMCPNKDWFSSLKELEGGIVFMGNDSACKTMGVGTIQLKNHDGL 60

Query: 351 VQELEDVRYVPELKKNLISVGELDSRGFEMTLKGGVLKV*SNELVVMKGLKHGNLYFL 178
           +Q L DVRY+P LKKNLIS+G L+S+G  +TL+ G+LKV +  L VMKG +  NLY+L
Sbjct: 61  IQVLTDVRYIPSLKKNLISLGVLESKGLTITLRDGLLKVVAGILTVMKGTRRNNLYYL 118



 Score = 41.2 bits (95), Expect(2) = 3e-34
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -2

Query: 181 SASVSEGIAAVSDSVESDTTKLWHMRLGHSGEKSLKHL 68
           S  +     A +   +S+ T+LWHMRLGH+GEK+L+ L
Sbjct: 121 STIIGSTSTASTKDADSEATRLWHMRLGHAGEKALQSL 158