BLASTX nr result

ID: Papaver30_contig00047069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00047069
         (1291 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010244821.1| PREDICTED: snRNA-activating protein complex ...    63   5e-07
ref|XP_002265978.3| PREDICTED: snRNA-activating protein complex ...    62   1e-06
emb|CBI33274.3| unnamed protein product [Vitis vinifera]               62   1e-06

>ref|XP_010244821.1| PREDICTED: snRNA-activating protein complex subunit [Nelumbo
           nucifera] gi|720089612|ref|XP_010244822.1| PREDICTED:
           snRNA-activating protein complex subunit [Nelumbo
           nucifera]
          Length = 506

 Score = 63.2 bits (152), Expect = 5e-07
 Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
 Frame = -2

Query: 744 LGDPSAAGNGAP--------KNEALEKWECVY---LVKQKQTVFGDDTF-HSPNYEATDI 601
           L DPSA     P        K E LEKWEC+    L ++K+ V GD T  H P+++A D+
Sbjct: 333 LRDPSAINYSEPVFDWLRNSKEEVLEKWECIVSGELQQKKKAVLGDVTISHLPHFKAVDM 392

Query: 600 LNTRFCNLSFRIGPESIYCDQ 538
             TRFC+L FR+G   +YC Q
Sbjct: 393 HKTRFCDLKFRLGAGYLYCHQ 413


>ref|XP_002265978.3| PREDICTED: snRNA-activating protein complex subunit-like [Vitis
           vinifera]
          Length = 443

 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 12/81 (14%)
 Frame = -2

Query: 744 LGDPSAAGNGAP--------KNEALEKWECVY---LVKQKQTVFGDDTF-HSPNYEATDI 601
           L DPSA     P        K++ALEKWEC+    L ++++ + GD T  H P+++A D+
Sbjct: 269 LRDPSAIDYSKPIFDWLRNSKDDALEKWECIISGDLQQKQKALLGDPTISHLPHFKAVDM 328

Query: 600 LNTRFCNLSFRIGPESIYCDQ 538
             TRFC+L FR+G   +YC Q
Sbjct: 329 HKTRFCDLQFRLGAGYLYCHQ 349


>emb|CBI33274.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 12/81 (14%)
 Frame = -2

Query: 744 LGDPSAAGNGAP--------KNEALEKWECVY---LVKQKQTVFGDDTF-HSPNYEATDI 601
           L DPSA     P        K++ALEKWEC+    L ++++ + GD T  H P+++A D+
Sbjct: 71  LRDPSAIDYSKPIFDWLRNSKDDALEKWECIISGDLQQKQKALLGDPTISHLPHFKAVDM 130

Query: 600 LNTRFCNLSFRIGPESIYCDQ 538
             TRFC+L FR+G   +YC Q
Sbjct: 131 HKTRFCDLQFRLGAGYLYCHQ 151


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