BLASTX nr result
ID: Papaver30_contig00047054
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00047054
(640 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera] 152 2e-34
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 147 5e-33
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 146 9e-33
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera] 145 2e-32
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 145 2e-32
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 143 7e-32
gb|AAB82754.1| retrofit [Oryza longistaminata] 143 7e-32
ref|XP_007014689.1| Uncharacterized protein TCM_040047 [Theobrom... 143 7e-32
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 143 9e-32
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 143 9e-32
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 142 1e-31
ref|XP_012851796.1| PREDICTED: uncharacterized protein LOC105971... 141 3e-31
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 140 5e-31
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 140 8e-31
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 139 2e-30
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc... 137 5e-30
gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indi... 137 7e-30
emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera] 136 9e-30
gb|AAT39281.2| Integrase core domain containing protein [Solanum... 136 1e-29
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 136 1e-29
>emb|CAN63683.1| hypothetical protein VITISV_030301 [Vitis vinifera]
Length = 1272
Score = 152 bits (384), Expect = 2e-34
Identities = 84/204 (41%), Positives = 117/204 (57%), Gaps = 10/204 (4%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYI----ALLGGYQGNQ--CVTATGDTHHM 465
CQ+C K GH +C+ +D P A A+L +Q TG THH+
Sbjct: 297 CQLCGKFGHTAIKCYHRFDINYQGNNGVPLAQAPFSHAMLAAAPDHQDSWFFDTGATHHL 356
Query: 464 TADMRNLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLL 285
+ + L+ Y GT+QV +G+G+S I N G SF F ++ + LN + HVP + TNL+
Sbjct: 357 SHXAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLI 416
Query: 284 SVSQFCKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVS 105
SVS+FC DN VFFEFH+SYF VKD+ T ILL+G R+GLY F SS + P+++V+
Sbjct: 417 SVSKFCTDNAVFFEFHSSYFFVKDQVTKKILLKGWLRDGLYEF------SSSSPPRAFVT 470
Query: 104 ----SSFPLWHQRLGHPMLRTVSK 45
S +WH RLGHP + +SK
Sbjct: 471 TGSFSDGAIWHSRLGHPAVPILSK 494
>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
Length = 1334
Score = 147 bits (371), Expect = 5e-33
Identities = 82/204 (40%), Positives = 115/204 (56%), Gaps = 10/204 (4%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYI----ALLGGYQGNQ--CVTATGDTHHM 465
CQ+C K GH +C+ +D P A A+ +Q TG THH+
Sbjct: 297 CQLCGKFGHTAIKCYHRFDINYQGNNGVPLAQAPFSHAMXAAAPDHQDSWFFDTGATHHL 356
Query: 464 TADMRNLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLL 285
+ + L+ Y GT+QV +G+G+S I N G SF F ++ + LN + HVP + TNL+
Sbjct: 357 SHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLI 416
Query: 284 SVSQFCKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVS 105
SVS+FC DN VFFEFH+S F VKD+ T ILL+G R+GLY F SS + P+++V+
Sbjct: 417 SVSKFCTDNAVFFEFHSSCFFVKDQVTKKILLKGWLRDGLYEF------SSSSPPRAFVT 470
Query: 104 ----SSFPLWHQRLGHPMLRTVSK 45
S +WH RLGHP + +SK
Sbjct: 471 TGSFSDGAIWHSRLGHPAVPILSK 494
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 146 bits (369), Expect = 9e-33
Identities = 79/203 (38%), Positives = 113/203 (55%), Gaps = 1/203 (0%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTADMRN 447
CQ+C K+GH CW+ YD+ K+ AA G N + TG T H+T ++
Sbjct: 278 CQVCFKRGHTAADCWYRYDEDYVPDAKHVAAAAVNSYGVDTNWYID-TGATDHVTGELDK 336
Query: 446 LTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKN-RDYHLNNIYHVPQIKTNLLSVSQF 270
LT+ KY+G EQ+H +G+ +I++IG A N R+ HL N+ +VPQ K NL+SV +
Sbjct: 337 LTMKEKYNGGEQIHTASGAGMDISHIGHAIVHNPNSRNIHLRNVLYVPQAKKNLVSVHRL 396
Query: 269 CKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSSSFPL 90
DN+ F E H YF +KD+ T LL+G++ LY SS + S + S
Sbjct: 397 VNDNSAFLELHRDYFFLKDQITRKTLLKGRSWRRLYPLPH----SSLKQAYSAIKLSLDR 452
Query: 89 WHQRLGHPMLRTVSKVYHQFSLP 21
WH RLGHP + TV +V ++FSLP
Sbjct: 453 WHHRLGHPSITTVKQVVNKFSLP 475
>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
Length = 515
Score = 145 bits (366), Expect = 2e-32
Identities = 81/204 (39%), Positives = 115/204 (56%), Gaps = 10/204 (4%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIA----LLGGYQGNQ--CVTATGDTHHM 465
CQ+C K GH +C+ +D P A + +L +Q TG THH+
Sbjct: 269 CQLCGKFGHTVIKCYHRFDINYQGNNSVPPAQASFSHSMLAAAPNHQDSWFFDTGATHHL 328
Query: 464 TADMRNLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLL 285
+ ++ L+ Y GT QV +G+G+S I + G SF F ++ + LN + HVP + TNL+
Sbjct: 329 SHSVQTLSCVQPYSGTNQVTIGDGNSLPILHTGTKSFFFPSKTFSLNQVLHVPHLSTNLI 388
Query: 284 SVSQFCKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVS 105
SVS+FC DN VFFEFH SYF VKD+ T ILL+G R+GLY F SS + P+++V+
Sbjct: 389 SVSKFCMDNAVFFEFHFSYFFVKDQVTKKILLKGWLRDGLYEF------SSSSPPRAFVT 442
Query: 104 SSF----PLWHQRLGHPMLRTVSK 45
+S +WH LGHP +SK
Sbjct: 443 TSSFSDGAIWHSCLGHPAAPILSK 466
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 145 bits (365), Expect = 2e-32
Identities = 79/206 (38%), Positives = 110/206 (53%), Gaps = 4/206 (1%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTADMRN 447
CQ+C K+GH +CW +D+ ++ AA N + + G T H+T+++
Sbjct: 248 CQVCYKRGHVAAKCWHRFDENYVPDERHVAAAAQAAYAVDTNWYIDS-GATDHITSELDK 306
Query: 446 LTIPHKYDGTEQVHVGNGSSFNIANIGKASF-TFKNRDYHLNNIYHVPQIKTNLLSVSQF 270
LT+ KY GTE++H NG I +IG A T N HL N+ HVP NL+S S+
Sbjct: 307 LTVREKYKGTEKIHTANGVGMQIKHIGHALVHTPDNHTLHLKNVLHVPHATKNLISASRL 366
Query: 269 CKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSS---S 99
+DN VF E H+ YF+VKD+ I+L+G+ R GLY F P++ YV S S
Sbjct: 367 AEDNYVFLEIHSKYFLVKDRAMRNIILKGRCRKGLYPF--------PSEDAKYVCSVAPS 418
Query: 98 FPLWHQRLGHPMLRTVSKVYHQFSLP 21
F WH RL HP VS+V +Q LP
Sbjct: 419 FARWHSRLSHPTTPIVSRVVNQNKLP 444
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 143 bits (361), Expect = 7e-32
Identities = 76/208 (36%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTADMRN 447
CQ+C K+GH CW+ +D+ K AA G TG T H+T ++
Sbjct: 281 CQVCFKRGHTAADCWYRFDEDYVADEKLAAAATNSYG--IDTNWYIDTGATDHITGELEK 338
Query: 446 LTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSVSQFC 267
LT KY+G EQ+H +G+ +I++IG + +R+ HLNN+ +VPQ K +L+S SQ
Sbjct: 339 LTTKEKYNGNEQIHTASGAGMDISHIGHTTVHTPSRNIHLNNVLYVPQAKKSLISASQLA 398
Query: 266 KDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSSSFPL- 90
DN+ F E H+ +F +KD+ T ILL G+ R+GLY + T Q+ ++ L
Sbjct: 399 TDNSAFLELHSKFFSIKDQVTKDILLEGRCRHGLYPIP--KSFGRTTSKQALGTTKLSLS 456
Query: 89 -WHQRLGHPMLRTVSKVYHQFSLPNTTE 9
WH RLGHP L V +V + +LP + E
Sbjct: 457 RWHSRLGHPSLPIVKQVISKNNLPCSVE 484
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 143 bits (361), Expect = 7e-32
Identities = 75/206 (36%), Positives = 109/206 (52%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTADMRN 447
CQ+C K+GH CW+ +D+ K AA G TG T H+T ++
Sbjct: 280 CQVCFKRGHTAADCWYRFDEDYVADEKLVAAATNSYG--IDTNWYIDTGATDHITGELEK 337
Query: 446 LTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSVSQFC 267
LT KY+G EQ+H +G+ +I++IG +R+ HLNN+ +VPQ K NL+S SQ
Sbjct: 338 LTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVLYVPQAKKNLISASQLA 397
Query: 266 KDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSSSFPLW 87
DN+ F E H+ +F +KD+ T +LL G+ R+GLY S+ + S W
Sbjct: 398 ADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPKFFGRSTNKQALGAAKLSLSRW 457
Query: 86 HQRLGHPMLRTVSKVYHQFSLPNTTE 9
H RLGHP L V +V + +LP + E
Sbjct: 458 HSRLGHPSLPIVKQVISRNNLPCSVE 483
>ref|XP_007014689.1| Uncharacterized protein TCM_040047 [Theobroma cacao]
gi|508785052|gb|EOY32308.1| Uncharacterized protein
TCM_040047 [Theobroma cacao]
Length = 678
Score = 143 bits (361), Expect = 7e-32
Identities = 79/205 (38%), Positives = 117/205 (57%), Gaps = 2/205 (0%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQ-CVTATGDTHHMTADMR 450
CQ+C+K GH C + N + K P A IA + N+ V + +HH+TAD+
Sbjct: 2 CQLCEKPGHTAKIC-----RLNKSSIKEPVANIATASQFHDNKNWVVYSRASHHVTADLN 56
Query: 449 NLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSVSQF 270
NL++ +Y G E++ VG G+S +I +IG + + N+ L N+ HVP + NL+S+S+F
Sbjct: 57 NLSLYTEYGGLEKIAVGGGTSLSINHIGFSIISTTNKPLKLTNVLHVPVMNRNLISISKF 116
Query: 269 CKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAG-VEKISSPTKPQSYVSSSFP 93
CK NNVF EF +F+VKD G L+R NRNGLY + +S T V +SF
Sbjct: 117 CKTNNVFVEFFPFHFLVKDSSMGAPLVRSLNRNGLYELPRCMSHLSMITTTFLSVKTSFD 176
Query: 92 LWHQRLGHPMLRTVSKVYHQFSLPN 18
+WH+RLGHP ++ + F LP+
Sbjct: 177 VWHRRLGHPSSEILTFMLKFFGLPS 201
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 143 bits (360), Expect = 9e-32
Identities = 75/206 (36%), Positives = 109/206 (52%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTADMRN 447
CQ+C K+GH CW+ +D+ K AA G TG T H+T ++
Sbjct: 284 CQVCFKRGHTAADCWYRFDEDYVADEKLVAAATNSYG--IDTNWYIDTGATDHITGELEK 341
Query: 446 LTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSVSQFC 267
LT KY+G EQ+H +G+ +I++IG +R+ HLNN+ +VPQ K NL+S SQ
Sbjct: 342 LTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVLYVPQAKKNLISASQLA 401
Query: 266 KDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSSSFPLW 87
DN+ F E H+ +F +KD+ T +LL G+ R+GLY S+ + S W
Sbjct: 402 ADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQALGAAKLSLSRW 461
Query: 86 HQRLGHPMLRTVSKVYHQFSLPNTTE 9
H RLGHP L V +V + +LP + E
Sbjct: 462 HSRLGHPSLPIVKQVISRNNLPCSVE 487
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 143 bits (360), Expect = 9e-32
Identities = 75/206 (36%), Positives = 109/206 (52%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTADMRN 447
CQ+C K+GH CW+ +D+ K AA G TG T H+T ++
Sbjct: 284 CQVCFKRGHTAADCWYRFDEDYVADEKLVAAATNSYG--IDTNWYIDTGATDHITGELEK 341
Query: 446 LTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSVSQFC 267
LT KY+G EQ+H +G+ +I++IG +R+ HLNN+ +VPQ K NL+S SQ
Sbjct: 342 LTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVLYVPQAKKNLISASQLA 401
Query: 266 KDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSSSFPLW 87
DN+ F E H+ +F +KD+ T +LL G+ R+GLY S+ + S W
Sbjct: 402 ADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPKSFGRSTNKQALGAAKLSLSRW 461
Query: 86 HQRLGHPMLRTVSKVYHQFSLPNTTE 9
H RLGHP L V +V + +LP + E
Sbjct: 462 HSRLGHPSLPIVKQVISRNNLPCSVE 487
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 142 bits (359), Expect = 1e-31
Identities = 81/204 (39%), Positives = 114/204 (55%), Gaps = 10/204 (4%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYI----ALLGGYQGNQ--CVTATGDTHHM 465
CQ+C K GH +C+ +D P A A+L +Q TG THH+
Sbjct: 297 CQLCGKFGHTAIKCYHRFDINYQGNNGVPLAQAPFSHAMLAAAPDHQDSWFFDTGATHHL 356
Query: 464 TADMRNLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLL 285
+ + L+ Y GT+QV +G+G+S I N G SF F ++ + LN + HVP + TNL+
Sbjct: 357 SHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLI 416
Query: 284 SVSQFCKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVS 105
SVS+F DN VFFE H+S F VKD+ T ILL+G R+GLY F SS + P+++V+
Sbjct: 417 SVSKFXTDNAVFFEXHSSCFFVKDQVTKKILLKGWLRDGLYEF------SSSSPPRAFVT 470
Query: 104 ----SSFPLWHQRLGHPMLRTVSK 45
S +WH RLGHP + +SK
Sbjct: 471 TGSFSDGAIWHSRLGHPAVPILSK 494
>ref|XP_012851796.1| PREDICTED: uncharacterized protein LOC105971489 [Erythranthe
guttatus]
Length = 445
Score = 141 bits (356), Expect = 3e-31
Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 1/205 (0%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQ-CVTATGDTHHMTADMR 450
CQ+C K GH C+ + +++ P A +A N+ V +G THH+T+D++
Sbjct: 230 CQLCDKPGHSAKTCYSR--GQPSSQLSRPQANLAERDTTHNNKNWVLDSGATHHITSDLQ 287
Query: 449 NLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSVSQF 270
NL++ Y G E V VGNG+ I++IG +S + LNN+ P IK NL+SVSQF
Sbjct: 288 NLSMHSNYVGNEDVVVGNGNEIPISHIGSSSINSHGSSFALNNVLCAPLIKKNLISVSQF 347
Query: 269 CKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSSSFPL 90
CK NNV EF +YF+VKD T L +G++R+ LY ++ + S P + ++ S L
Sbjct: 348 CKQNNVSIEFFANYFLVKDLNTRASLAKGRSRHNLYEWSSSKTSPSTLTPSTSIALSSQL 407
Query: 89 WHQRLGHPMLRTVSKVYHQFSLPNT 15
WHQRLGHP ++ +P++
Sbjct: 408 WHQRLGHPSRSIQKRILTNNKIPSS 432
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 140 bits (354), Expect = 5e-31
Identities = 79/220 (35%), Positives = 109/220 (49%), Gaps = 18/220 (8%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKY----------PAAYIALLGGYQGNQCVTATGD 477
CQIC K GH CW +D + K + P A +A G TG
Sbjct: 314 CQICCKIGHVATECWHRFDNQFQPKASHSNQFSSSAQDPQALMAAPGLLGETPWFLDTGA 373
Query: 476 THHMTADMRNLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIK 297
THH+T+D+ NL++ + + G ++V VGNG + + G +S L N+ HVP+I
Sbjct: 374 THHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGALLLKNVLHVPKIA 433
Query: 296 TNLLSVSQFCKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSP---- 129
NL+SV + C DNN + EF+ SYF VKD+ T ILL+G GLY +P
Sbjct: 434 ANLVSVQKLCHDNNAYVEFYPSYFAVKDQKTQAILLKGGLDKGLYSVPSAYSSHAPQARV 493
Query: 128 ----TKPQSYVSSSFPLWHQRLGHPMLRTVSKVYHQFSLP 21
+ S S LWH RLGHP L V+KV + ++LP
Sbjct: 494 FQIFSTSSSTSIDSMRLWHNRLGHPSLAIVNKVLNHYNLP 533
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 140 bits (352), Expect = 8e-31
Identities = 76/202 (37%), Positives = 102/202 (50%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTADMRN 447
C +C K+GH CW YD+ K AA G N V TG T H+T+ +
Sbjct: 178 CHVCYKRGHVAANCWHRYDEDYVPDDKLVAA-ATYSHGADSNWYVD-TGATDHITSQLEK 235
Query: 446 LTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSVSQFC 267
L Y G +Q+H +G+ I +IG A R HLNN+ HVPQ NL+S ++
Sbjct: 236 LNTREVYKGHDQIHTASGAGMKIKHIGHAIVHTPTRPLHLNNVLHVPQAAKNLISATKLA 295
Query: 266 KDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSSSFPLW 87
DN+VF E H+ YF++KD+ T +L+G R+GLY +S TK V+ S W
Sbjct: 296 SDNSVFVEIHSKYFLIKDRTTRSTVLKGPRRHGLYPLPS----TSSTKQAFAVAPSLERW 351
Query: 86 HQRLGHPMLRTVSKVYHQFSLP 21
H RLGHP + V KV LP
Sbjct: 352 HSRLGHPSIPIVMKVISSNKLP 373
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 139 bits (349), Expect = 2e-30
Identities = 78/212 (36%), Positives = 111/212 (52%), Gaps = 10/212 (4%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCV---TATGDTHHMTAD 456
CQ+C + GH CW+ +D+ P A +Q V T TG T H+T D
Sbjct: 282 CQVCSRVGHTALNCWYRFDENYV-----PDQRSANSAAHQNGSNVPWYTDTGATDHITGD 336
Query: 455 MRNLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSVS 276
+ LT+ KY GT+Q+ NG+ I+NIG A +R HL ++ HVP NL+SV
Sbjct: 337 LDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIVPTSSRSLHLRSVLHVPSTHKNLISVH 396
Query: 275 QFCKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKP-----QSY 111
+ DN+VF EFH+S+F++KD+ T +LL G+ R+GLY P P ++
Sbjct: 397 RLTNDNDVFIEFHSSHFLIKDRQTKAVLLHGKCRDGLYPL--------PPHPDLRLKHNF 448
Query: 110 VSSSFPL--WHQRLGHPMLRTVSKVYHQFSLP 21
S+ PL WH+RLGHP V +V +LP
Sbjct: 449 SSTRVPLEHWHKRLGHPSRDIVHRVISNNNLP 480
>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 137 bits (345), Expect = 5e-30
Identities = 78/213 (36%), Positives = 112/213 (52%), Gaps = 5/213 (2%)
Frame = -3
Query: 635 DEP-CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTA 459
D P CQ+C K+GH CW YD+ + AA A G N + TG T H+T
Sbjct: 266 DRPICQVCLKRGHVAAECWHRYDETYVPDERSAAAAAAY--GIDTNWYLD-TGATDHITN 322
Query: 458 DMRNLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSV 279
++ L + KY G +++H +G+ I +IG + R+ HL NI HVPQ K NL+S
Sbjct: 323 ELDKLDVREKYKGGDKIHTASGAGMEIKHIGDSVIHTPTRELHLKNILHVPQAKKNLISA 382
Query: 278 SQFCKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYV--- 108
+ DN F E H++YF++KD+ T +L+G+ R LY S PT P V
Sbjct: 383 HRLAMDNFAFLEVHSNYFLIKDRVTRNTILKGRCRRRLY--------SLPTSPAKQVHAA 434
Query: 107 -SSSFPLWHQRLGHPMLRTVSKVYHQFSLPNTT 12
+ SF WH RLGHP + V++V + +LP +T
Sbjct: 435 TTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCST 467
>gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indica Group]
Length = 506
Score = 137 bits (344), Expect = 7e-30
Identities = 78/213 (36%), Positives = 112/213 (52%), Gaps = 5/213 (2%)
Frame = -3
Query: 635 DEP-CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTA 459
D P CQ+C K+GH CW YD+ + AA A G N + TG T H+T
Sbjct: 266 DRPICQVCLKRGHVAAECWHRYDETYVPDERSAAAAAAY--GIDTNWYLD-TGATDHITN 322
Query: 458 DMRNLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSV 279
++ L + KY G +++H +G+ I +IG + R+ HL NI HVPQ K NL+S
Sbjct: 323 ELDKLDVWEKYKGGDKIHTASGAGMEIKHIGDSVIHTPTRELHLKNILHVPQAKKNLISA 382
Query: 278 SQFCKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYV--- 108
+ DN F E H++YF++KD+ T +L+G+ R LY S PT P V
Sbjct: 383 HRLAMDNFAFLEVHSNYFLIKDRATRNTILKGRCRRRLY--------SLPTSPAKQVHAA 434
Query: 107 -SSSFPLWHQRLGHPMLRTVSKVYHQFSLPNTT 12
+ SF WH RLGHP + V++V + +LP +T
Sbjct: 435 TTPSFSRWHSRLGHPAVPIVTRVLSKNNLPCST 467
>emb|CAN72498.1| hypothetical protein VITISV_010513 [Vitis vinifera]
Length = 1394
Score = 136 bits (343), Expect = 9e-30
Identities = 80/208 (38%), Positives = 114/208 (54%), Gaps = 14/208 (6%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYD-----KRNTNKGKYPAAYIALLGGYQGNQC--VTATGDTHH 468
CQ+C K GH +C+ +D + + + A+L +Q TG THH
Sbjct: 301 CQLCGKFGHTVVKCYHXFDITYQGTNGVSSSQDSSPLQAMLAATPNHQYSWFFDTGATHH 360
Query: 467 MTADMRNLTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNL 288
++ + L+ Y G +QV +G+G S I N G SF F ++ + LN + HVPQ+ TNL
Sbjct: 361 LSHSAQTLSHVQPYSGADQVTIGDGHSLPILNTGNKSFFFHSKVFCLNQVLHVPQLSTNL 420
Query: 287 LSVSQFCKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYV 108
+SVS+FC DN VFFEFH+++F VKD+ T LL+G R+GLY F S + ++V
Sbjct: 421 ISVSKFCTDNAVFFEFHSTHFFVKDQVTKQTLLKGWLRDGLYEF------PSSSSTHAFV 474
Query: 107 S-SSFP------LWHQRLGHPMLRTVSK 45
S SS P +WH RLGHP +SK
Sbjct: 475 STSSVPALTPGAIWHSRLGHPAXPILSK 502
>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
Length = 1760
Score = 136 bits (342), Expect = 1e-29
Identities = 76/202 (37%), Positives = 107/202 (52%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTADMRN 447
CQ+C + GH C + Y A Q + TG THHM ++ +N
Sbjct: 271 CQLCDRLGHSAKVCRSQSHDHIQARANYAAR-----SPTQQAPWIVDTGATHHMASNAQN 325
Query: 446 LTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKNRDYHLNNIYHVPQIKTNLLSVSQFC 267
T H Y G E++ +G+G++ I++ G + + N+ + L N IK NLLSVS+FC
Sbjct: 326 FTDVHTYHGPEEIAMGDGNTIPISHTGNTNLSASNQQFKLLNTLCSHSIKNNLLSVSKFC 385
Query: 266 KDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSSSFPLW 87
+DN+ EF + VKD TG L RGQNR+GLY + S+ PQ V LW
Sbjct: 386 RDNHTSIEFFPFSYCVKDLSTGAPLFRGQNRDGLYEW---PLGSAHHTPQCNVVVPLHLW 442
Query: 86 HQRLGHPMLRTVSKVYHQFSLP 21
H+RLGHP RT++ ++HQFSLP
Sbjct: 443 HRRLGHPNHRTLNMIFHQFSLP 464
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 136 bits (342), Expect = 1e-29
Identities = 76/201 (37%), Positives = 110/201 (54%), Gaps = 2/201 (0%)
Frame = -3
Query: 626 CQICKKKGHKGDRCWFHYDKRNTNKGKYPAAYIALLGGYQGNQCVTATGDTHHMTADMRN 447
CQ+C K+GH CW+ YD+ K+ AA G N + TG T H+T ++
Sbjct: 394 CQVCFKRGHTAADCWYRYDEDYVPDAKHVAAAAVNSYGVDTNWYID-TGATDHVTGELDK 452
Query: 446 LTIPHKYDGTEQVHVGNGSSFNIANIGKASFTFKN-RDYHLNNIYHVPQIKTNLLSVSQF 270
LT+ KY+G EQ+H +G+ +I++IG A N R+ HL N+ +VPQ K NL+SV +
Sbjct: 453 LTMKEKYNGGEQIHTASGAGMDISHIGHAIVHNPNSRNIHLRNVLYVPQAKKNLVSVHRL 512
Query: 269 CKDNNVFFEFHTSYFVVKDKCTGIILLRGQNRNGLYMFAGVEKISSPTKPQSYVSSSFPL 90
DN+ F E H YF +KD+ T LL+G++ LY SS + S + S
Sbjct: 513 VNDNSAFLELHRDYFFLKDQITRKTLLKGRSWRRLYPLPH----SSLKQAYSAIKLSLDR 568
Query: 89 WHQRLGHPMLRT-VSKVYHQF 30
WH RLGHP + T S+V+ +F
Sbjct: 569 WHHRLGHPSITTHKSQVFDKF 589