BLASTX nr result

ID: Papaver30_contig00046268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00046268
         (419 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]     73   7e-11
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     73   7e-11
gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]     70   6e-10
gb|KJB65383.1| hypothetical protein B456_010G092600 [Gossypium r...    61   4e-07
gb|KJB66382.1| hypothetical protein B456_010G138200 [Gossypium r...    60   8e-07
emb|CAN61965.1| hypothetical protein VITISV_031520 [Vitis vinifera]    58   2e-06
ref|XP_010682064.1| PREDICTED: uncharacterized protein LOC104896...    57   5e-06

>gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 321

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 37/94 (39%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
 Frame = -2

Query: 418 RLTLILYEGLDHKTMTTVESLCAGNF*DKSAEEGYAFLQEVDEKTKEWD-AKEPVRSIAN 242
           RL  ++YEGLD+ + T++ES+C G+F  K+A+E + FL+ + EKT +W+   + V S++ 
Sbjct: 163 RLCQVIYEGLDYSSKTSLESMCQGDFMRKNADEAWEFLESLSEKTMQWENCDDRVSSVSQ 222

Query: 241 SKGAH-RVDIQFDSDAKIASLTRRLESLEHSSEA 143
           SK +   ++    S+AK+A++ RRLE+LE    A
Sbjct: 223 SKSSGLSLESNIASEAKMATILRRLEALEVKERA 256


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 37/94 (39%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
 Frame = -2

Query: 418 RLTLILYEGLDHKTMTTVESLCAGNF*DKSAEEGYAFLQEVDEKTKEWD-AKEPVRSIAN 242
           RL  ++YEGLD+ + T++ES+C G+F  K+A+E + FL+ + EKT +W+   + V S++ 
Sbjct: 95  RLCQVIYEGLDYSSKTSLESMCQGDFMRKNADEAWEFLESLSEKTMQWENCDDRVSSVSQ 154

Query: 241 SKGAH-RVDIQFDSDAKIASLTRRLESLEHSSEA 143
           SK +   ++    S+AK+A++ RRLE+LE    A
Sbjct: 155 SKSSGLSLESNIASEAKMATILRRLEALEVKERA 188


>gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 279

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = -2

Query: 418 RLTLILYEGLDHKTMTTVESLCAGNF*DKSAEEGYAFLQEVDEKTKEWD-AKEPVRSIAN 242
           RL  I+YEGLD+   T++ES+C G+F  K+A+E + FL+ + EK  +W+   + V SI  
Sbjct: 165 RLCQIIYEGLDYSAKTSLESMCHGDFMRKNADEAWEFLESLSEKIMQWEHCDDMVSSIPQ 224

Query: 241 SKGAH-RVDIQFDSDAKIASLTRRLESLEHSSEA 143
           SK +   ++    S+AK+A++ RRLE+LE    A
Sbjct: 225 SKSSGLSLESNIASEAKMATILRRLEALEIKERA 258


>gb|KJB65383.1| hypothetical protein B456_010G092600 [Gossypium raimondii]
          Length = 208

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
 Frame = -2

Query: 418 RLTLILYEGLDHKTMTTVESLCAGNF*DKSAEEGYAFLQEVDEKTKEWDAKEPVR----- 254
           R     +EGL HKT   +E++C     DK  +E + +L  + E ++ W+   P+      
Sbjct: 89  RTLSFFHEGLTHKTKQFIETMCNRELLDKEPKEAFDYLDHLLENSQSWNIVNPIEVPIRW 148

Query: 253 SIANSKGAHRVDIQFDSDAKIASLTRRLESLE 158
           ++ NSKG + ++ + D  A++ASLTR++E++E
Sbjct: 149 NLTNSKGKYHLNQEDDLSARMASLTRKVEAIE 180


>gb|KJB66382.1| hypothetical protein B456_010G138200 [Gossypium raimondii]
          Length = 250

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
 Frame = -2

Query: 400 YEGLDHKTMTTVESLCAGNF*DKSAEEGYAFLQEVDEKTKEWDAKEP----VRS-IANSK 236
           YEGL  +T   VE++C   F DK  +E + +L  + E ++ W    P    +RS + N+K
Sbjct: 121 YEGLTPETKQFVETMCNEEFLDKEPKEAFDYLDHLVENSQSWHIVNPSEGSIRSNLTNNK 180

Query: 235 GAHRVDIQFDSDAKIASLTRRLESLEHSSEAKPFVESLD*TFYDDGSEQVNAL 77
           G + +  + D  AK+ASLTR++E++E   E           F +  S+ +N +
Sbjct: 181 GKYHLSQEDDLSAKMASLTRKVEAMELRKETLQEFMQTKTNFNNQTSQDINEI 233


>emb|CAN61965.1| hypothetical protein VITISV_031520 [Vitis vinifera]
          Length = 2703

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
 Frame = -2

Query: 400 YEGLDHKTMTTVESLCAGNF*DKSAEEGYAFLQEVDEKTKEWD---------AKEPVRSI 248
           Y+G+       +E++C G+F  K+ EE   FL  V E +K WD         AK    + 
Sbjct: 183 YDGMSSSMKQLLETMCGGDFMSKNPEEAMDFLNYVAEVSKGWDEPNKEEVGKAKSQPNTF 242

Query: 247 ANSKGAHRVDIQFDSDAKIASLTRRLESLEHSSEAKPFVESLD*TFYDDGSEQVNALYQD 68
               G + ++   D  AK+A++TRRL+ LE     + + +    + + D  E++  ++ D
Sbjct: 243 NAKAGMYTLNEDIDMKAKVAAMTRRLDELELKKIREVYFQRYMLSIFSDMVERIMEVFMD 302

Query: 67  NLRKY 53
           ++  Y
Sbjct: 303 DITIY 307


>ref|XP_010682064.1| PREDICTED: uncharacterized protein LOC104896968 [Beta vulgaris
           subsp. vulgaris]
          Length = 324

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 27/155 (17%)
 Frame = -2

Query: 418 RLTLILYEGLDHKTMTTVESLCAGNF*DKSAEEGYAFLQEVDEKTKEW-----DAKEPVR 254
           RL  I+YEGLD  + T +ES+C GNF  K+ +E + FL+++ +KT +W     D+     
Sbjct: 165 RLCQIVYEGLDPNSRTMLESMCQGNFLGKTIDEAWEFLEDLADKTLQWETTRADSSSLPD 224

Query: 253 SIANSKGA---------------------HRVDIQFDSDAKIASLT-RRLESLEHSSEAK 140
            I+++KG                       R+ +      +IASL+      ++H S A 
Sbjct: 225 KISSAKGGLYNVSDNTYLESRLTLLENQLKRLSVPQSQAHQIASLSCTHCHGVDHISNAC 284

Query: 139 PFVESLD*TFYDDGSEQVNALYQDNLRKYDPYSNT 35
           P++           + +VN  +Q    + DPYSNT
Sbjct: 285 PYIAP-----QSYNNIEVNMAFQ--RPRNDPYSNT 312


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