BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00045596
         (530 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006382709.1| hypothetical protein POPTR_0005s04650g [Popu...   154   3e-35
ref|XP_007035007.1| Pentatricopeptide repeat superfamily protein...   153   6e-35
ref|XP_011032541.1| PREDICTED: putative pentatricopeptide repeat...   152   7e-35
emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]   152   7e-35
ref|XP_007035008.1| Pentatricopeptide repeat superfamily protein...   152   1e-34
ref|XP_010650040.1| PREDICTED: pentatricopeptide repeat-containi...   151   2e-34
emb|CBI26377.3| unnamed protein product [Vitis vinifera]              151   2e-34
ref|XP_012442134.1| PREDICTED: pentatricopeptide repeat-containi...   149   8e-34
ref|XP_012441324.1| PREDICTED: pentatricopeptide repeat-containi...   149   8e-34
gb|KJB61723.1| hypothetical protein B456_009G378400, partial [Go...   149   8e-34
gb|KJB61722.1| hypothetical protein B456_009G378400 [Gossypium r...   149   8e-34
ref|XP_006382761.1| hypothetical protein POPTR_0005s05170g [Popu...   149   1e-33
ref|XP_012441421.1| PREDICTED: pentatricopeptide repeat-containi...   148   2e-33
ref|XP_012441419.1| PREDICTED: pentatricopeptide repeat-containi...   148   2e-33
ref|XP_012441418.1| PREDICTED: pentatricopeptide repeat-containi...   148   2e-33
ref|XP_012441415.1| PREDICTED: pentatricopeptide repeat-containi...   148   2e-33
ref|XP_012441414.1| PREDICTED: pentatricopeptide repeat-containi...   148   2e-33
gb|KJB61828.1| hypothetical protein B456_009G384200 [Gossypium r...   148   2e-33
gb|KJB61822.1| hypothetical protein B456_009G383500, partial [Go...   148   2e-33
gb|KJB61807.1| hypothetical protein B456_009G384100 [Gossypium r...   148   2e-33

>ref|XP_006382709.1| hypothetical protein POPTR_0005s04650g [Populus trichocarpa]
           gi|550338075|gb|ERP60506.1| hypothetical protein
           POPTR_0005s04650g [Populus trichocarpa]
          Length = 531

 Score =  154 bits (389), Expect = 3e-35
 Identities = 80/176 (45%), Positives = 109/176 (61%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ V  KM K+GIQP+A+T NTLI+GLC  GK+  A+ L N M      PNV+SY+ +I+
Sbjct: 64  AVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVIN 123

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G    A+ +F +M   +          ++I+ LC    +NEA   L EM DRGI 
Sbjct: 124 GLCKNGNTIMAVRVFRKM-EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIP 182

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            DV TYN+++HG C  G+L EA R F EM+ R + PDTVTF+IL+D  CK+GM  +
Sbjct: 183 PDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSE 238



 Score =  125 bits (315), Expect = 1e-26
 Identities = 63/169 (37%), Positives = 103/169 (60%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F++M   G +PN ++ NT+I+GLC+ G    A+++   M +   +PNVV+Y+ IID
Sbjct: 99  AVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIID 158

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           +LCK  LV+EA+   SEM+ D           ++++G C+ G+LNEA RL +EM  R + 
Sbjct: 159 SLCKDRLVNEAVEFLSEMV-DRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVM 217

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHC 508
            D  T+N L+ G C  G + EAR   + M ++G  P+  T++ L+D +C
Sbjct: 218 PDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYC 266



 Score =  122 bits (306), Expect = 1e-25
 Identities = 62/176 (35%), Positives = 96/176 (54%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F +M    + P+ VT N L+ GLC+ G V  A  +   M +    PN  +Y+A++D
Sbjct: 204 ATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMD 263

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             C    +DEA+ +   M+G             +ING C S R+NEA+RLL EM+++ ++
Sbjct: 264 GYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI-LINGYCKSKRMNEAKRLLSEMSEKNLT 322

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D  TY++L+ G C  G   EA   F EM   G+ PD + +SIL+D  CK G  ++
Sbjct: 323 PDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDE 378



 Score =  108 bits (269), Expect = 2e-21
 Identities = 61/176 (34%), Positives = 97/176 (55%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           AIKV   M   G  PN  + N LI+G C+  ++  A +L + M + N  P+ V+YS ++ 
Sbjct: 274 AIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQ 333

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LC+ G   EAL LF EM   S           +++G C  G L+EA +LL+EM +R I 
Sbjct: 334 GLCQVGRPREALNLFKEMCS-SGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 392

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++  Y  LI G  + G+LE A+  F ++   GI PD  T++++I    K+G++++
Sbjct: 393 PNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDE 448



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 53/165 (32%), Positives = 92/165 (55%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++  +M++  + P+ VT +TL+ GLC++G+   AL L   M      P++++YS ++D
Sbjct: 309 AKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLD 368

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G +DEAL L  EM  +            +I G+  +G+L  A+ L  +++  GI 
Sbjct: 369 GFCKHGHLDEALKLLKEM-HERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIR 427

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILI 496
            D+ TYN +I G    G  +EA  +F +M D G  PD+ +++++I
Sbjct: 428 PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVII 472



 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 39/133 (29%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
 Frame = +2

Query: 128 MGKWNCRPNVVSYSAIIDTLCKGGLVDEALILFSEMLGDSXXXXXXXXXXS-MINGLCNS 304
           M + N RP+VV +   + ++ K      A+ L ++M  D           + +IN LC  
Sbjct: 1   MVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQM--DLFGVTHNVYSLNVLINCLCRL 58

Query: 305 GRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTF 484
             ++ A  ++ +M   GI  D  T+N+LI+G C  G+++EA   F+EM+  G  P+ +++
Sbjct: 59  SHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISY 118

Query: 485 SILIDSHCKDGMT 523
           + +I+  CK+G T
Sbjct: 119 NTVINGLCKNGNT 131


>ref|XP_007035007.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508714036|gb|EOY05933.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 609

 Score =  153 bits (386), Expect = 6e-35
 Identities = 82/172 (47%), Positives = 108/172 (62%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A++VFDKM + G Q + VT   LI+GLC+I +    L+L   M + N    +V+YS IID
Sbjct: 144 AVQVFDKMRESGFQGDGVTFGILINGLCKIREPALGLELHRKMEESNYEGTLVTYSMIID 203

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G+VDEA+ LF EM+             S+I+GLC  GRL EA    +EM   G++
Sbjct: 204 AFCKDGMVDEAVGLFLEMVSKGITPDVVVYG-SLIDGLCRLGRLKEAVNFFDEMVSGGLT 262

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDG 517
           AD+  YNSLIHG C  G LEEA + F+ M+ +GISPD VTF+ILID  CK+G
Sbjct: 263 ADLVMYNSLIHGFCQAGMLEEATKIFNLMVRKGISPDVVTFTILIDCLCKEG 314



 Score =  116 bits (290), Expect = 8e-24
 Identities = 61/171 (35%), Positives = 99/171 (57%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F KM   GI+P  VT NTLI  LC+  +V  A ++ N M  +   P + +Y+ ++D
Sbjct: 389 AFQLFQKMHDKGIKPTTVTYNTLIGALCQARRVSTAQKMFNEMHVYGQFPILSTYTVMLD 448

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G ++EA+ LF   L  +           +I+G+C +GRL EAR++  E++++G+ 
Sbjct: 449 GLCKNGHIEEAMDLFHS-LESTEYKPGVEFFSILIDGMCKAGRLEEARKMFIEISEKGLV 507

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKD 514
            DV TYN +  G C  G   EA +   EM ++G  PD+++F+I+I    +D
Sbjct: 508 PDVVTYNIMFSGLCRKGMSLEADKLLTEMEEKGCLPDSISFNIIIHGLLRD 558



 Score =  114 bits (284), Expect = 4e-23
 Identities = 59/170 (34%), Positives = 101/170 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+  FD+M   G+  + V  N+LI G C+ G +  A ++ N M +    P+VV+++ +ID
Sbjct: 249 AVNFFDEMVSGGLTADLVMYNSLIHGFCQAGMLEEATKIFNLMVRKGISPDVVTFTILID 308

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G + EA  +   M+             S+I+G C++G+L+EA +L   +AD+G+ 
Sbjct: 309 CLCKEGKMGEAQGILDLMI-QQGKEPDIRTYNSLISGFCSTGQLDEATKLFGLIADQGLD 367

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            D  +YN +I+G+C   +++EA + F +M D+GI P TVT++ LI + C+
Sbjct: 368 LDAFSYNIMINGYCKSWKIDEAFQLFQKMHDKGIKPTTVTYNTLIGALCQ 417



 Score =  109 bits (273), Expect = 7e-22
 Identities = 60/176 (34%), Positives = 97/176 (55%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A K+F+ M + GI P+ VT   LI  LC+ GK+G A  + + M +    P++ +Y+++I 
Sbjct: 284 ATKIFNLMVRKGISPDVVTFTILIDCLCKEGKMGEAQGILDLMIQQGKEPDIRTYNSLIS 343

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             C  G +DEA  LF  ++ D            MING C S +++EA +L ++M D+GI 
Sbjct: 344 GFCSTGQLDEATKLFG-LIADQGLDLDAFSYNIMINGYCKSWKIDEAFQLFQKMHDKGIK 402

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
               TYN+LI   C    +  A++ F+EM   G  P   T+++++D  CK+G  E+
Sbjct: 403 PTTVTYNTLIGALCQARRVSTAQKMFNEMHVYGQFPILSTYTVMLDGLCKNGHIEE 458



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 55/174 (31%), Positives = 88/174 (50%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A K+F  +   G+  +A + N +I+G C+  K+  A QL   M     +P  V+Y+ +I 
Sbjct: 354 ATKLFGLIADQGLDLDAFSYNIMINGYCKSWKIDEAFQLFQKMHDKGIKPTTVTYNTLIG 413

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LC+   V  A  +F+EM               M++GLC +G + EA  L   +      
Sbjct: 414 ALCQARRVSTAQKMFNEMHVYGQFPILSTYTV-MLDGLCKNGHIEEAMDLFHSLESTEYK 472

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMT 523
             V  ++ LI G C  G LEEAR+ F E+ ++G+ PD VT++I+    C+ GM+
Sbjct: 473 PGVEFFSILIDGMCKAGRLEEARKMFIEISEKGLVPDVVTYNIMFSGLCRKGMS 526


>ref|XP_011032541.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial [Populus euphratica]
          Length = 615

 Score =  152 bits (385), Expect = 7e-35
 Identities = 79/176 (44%), Positives = 109/176 (61%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ V  KM K+GIQP+A+T NTLI+GLC  GK+  A+ L N M      PNV+SY+ +I+
Sbjct: 149 AVSVMGKMLKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMLWSGNEPNVISYNTVIN 208

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G    A+ +F +M   +          ++I+ LC    +NEA   L EM DRGI 
Sbjct: 209 GLCKTGNTIMAVRVFRKM-EQNGGTPNVVTYNTIIDSLCKDRLVNEAMEFLSEMVDRGIP 267

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            DV TYN+++HG C  G+L EA R F EM+ R + PD+VTF+IL+D  CK+GM  +
Sbjct: 268 PDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDSVTFNILVDGLCKEGMVSE 323



 Score =  124 bits (312), Expect = 2e-26
 Identities = 62/176 (35%), Positives = 99/176 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F +M    + P++VT N L+ GLC+ G V  A ++   M +    PN  +Y+A++D
Sbjct: 289 ATRLFKEMVGRNVMPDSVTFNILVDGLCKEGMVSEARRVSEAMTEKGAEPNAYTYNALMD 348

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             C    +DEA+ +   M+G             +ING C S R+NEA+RLL EM+++ ++
Sbjct: 349 GYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI-LINGYCKSRRMNEAKRLLSEMSEKNLT 407

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D  TY++L+ G C  G  +EA   F EM   G+ PD + +SIL+D  CK G  ++
Sbjct: 408 PDTVTYSTLMQGLCQAGRPQEALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDE 463



 Score =  109 bits (273), Expect = 7e-22
 Identities = 61/176 (34%), Positives = 97/176 (55%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           AIKV   M   G  PN  + N LI+G C+  ++  A +L + M + N  P+ V+YS ++ 
Sbjct: 359 AIKVLGIMIGKGCAPNLSSYNILINGYCKSRRMNEAKRLLSEMSEKNLTPDTVTYSTLMQ 418

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LC+ G   EAL LF EM   S           +++G C  G L+EA +LL+EM +R I 
Sbjct: 419 GLCQAGRPQEALNLFKEMCS-SGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIK 477

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++  Y  LI G  + G+LE A+  F ++   GI PD  T++++I    K+G++++
Sbjct: 478 PNIILYTILIRGMFIAGKLEIAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDE 533



 Score =  107 bits (267), Expect = 4e-21
 Identities = 58/165 (35%), Positives = 91/165 (55%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A +V + MT+ G +PNA T N L+ G C   ++  A+++   M    C PN+ SY+ +I+
Sbjct: 324 ARRVSEAMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILIN 383

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK   ++EA  L SEM  +           +++ GLC +GR  EA  L +EM   G+ 
Sbjct: 384 GYCKSRRMNEAKRLLSEM-SEKNLTPDTVTYSTLMQGLCQAGRPQEALNLFKEMCSSGLL 442

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILI 496
            D+  Y+ L+ G C HG L+EA +   EM +R I P+ + ++ILI
Sbjct: 443 PDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILI 487



 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 53/165 (32%), Positives = 90/165 (54%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++  +M++  + P+ VT +TL+ GLC+ G+   AL L   M      P++++YS ++D
Sbjct: 394 AKRLLSEMSEKNLTPDTVTYSTLMQGLCQAGRPQEALNLFKEMCSSGLLPDLMAYSILLD 453

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G +DEAL L  EM  +            +I G+  +G+L  A+ L  +++  GI 
Sbjct: 454 GFCKHGHLDEALKLLKEM-HERRIKPNIILYTILIRGMFIAGKLEIAKELFSKLSADGIR 512

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILI 496
            D+ TYN +I G    G  +EA   F +M D G  PD+ +++++I
Sbjct: 513 PDIWTYNVMIKGLLKEGLSDEAYELFRKMEDDGFLPDSCSYNVII 557



 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 50/171 (29%), Positives = 84/171 (49%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F +M   G+ P+ +  + L+ G C+ G +  AL+L   M +   +PN++ Y+ +I 
Sbjct: 429 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 488

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            +   G ++ A  LFS++  D            MI GL   G  +EA  L  +M D G  
Sbjct: 489 GMFIAGKLEIAKELFSKLSADGIRPDIWTYNV-MIKGLLKEGLSDEAYELFRKMEDDGFL 547

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKD 514
            D  +YN +I G   + +   A +  DEM+ +  S D+ TF +L+D    D
Sbjct: 548 PDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDLESHD 598



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
 Frame = +2

Query: 128 MGKWNCRPNVVSYSAIIDTLCKGGLVDEALILFSEMLGDSXXXXXXXXXXS-MINGLCNS 304
           M + N RP++V +   + ++ K      A+ L ++M  D           + +IN LC  
Sbjct: 86  MVRMNPRPSIVEFGKFLGSIAKKKQFSSAVSLCNQM--DLFGVTHNVYSLNVLINCLCRL 143

Query: 305 GRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTF 484
             ++ A  ++ +M   GI  D  T+N+LI+G C  G+++EA   F+EM+  G  P+ +++
Sbjct: 144 SHVDFAVSVMGKMLKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMLWSGNEPNVISY 203

Query: 485 SILIDSHCKDGMT 523
           + +I+  CK G T
Sbjct: 204 NTVINGLCKTGNT 216


>emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  152 bits (385), Expect = 7e-35
 Identities = 83/172 (48%), Positives = 110/172 (63%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
            A+++FD+MTK G+  +A T   LI+GLC+  K G A++L   M K NC+ +V +Y  IID
Sbjct: 1035 AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIID 1093

Query: 182  TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             LCK G+  EAL +FSEM+G +          S+++GLC  GRL EA    +EM  RGIS
Sbjct: 1094 ALCKDGMTTEALDMFSEMIG-AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 1152

Query: 362  ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDG 517
            ADV TYNSLIHG    G  +E   + + M+DRG SPD  TF+ILID  CK+G
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 1204



 Score =  112 bits (281), Expect = 8e-23
 Identities = 62/172 (36%), Positives = 97/172 (56%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
            A++ F +M   GI  +  T N+LI GL R G         N M      P+  +++ +ID
Sbjct: 1139 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 1198

Query: 182  TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             LCK G V EA  +  E++             +++NGLC  G+L +A +L E +ADRGI 
Sbjct: 1199 GLCKEGKVGEAQQIL-ELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK 1257

Query: 362  ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDG 517
             +V +YN LI+G+C   +++EA R+F+EM  +G+ P TVT++ LI + C+ G
Sbjct: 1258 LNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSG 1309



 Score =  104 bits (259), Expect = 3e-20
 Identities = 55/171 (32%), Positives = 97/171 (56%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
            A + F++M   G++P+ VT NTLI  LC+ G+V  A +L   M        + +Y  ++D
Sbjct: 1279 AFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 1338

Query: 182  TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             LCK G ++EA+ LF + +  +           +++G+C +G+L EA +  +E++  G+ 
Sbjct: 1339 GLCKNGHLEEAMDLF-QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397

Query: 362  ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKD 514
             D   YN LI+G C  G L EA +   +M ++G  PD++TF+++I +  K+
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 1448



 Score =  103 bits (257), Expect = 5e-20
 Identities = 56/176 (31%), Positives = 91/176 (51%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
            A K+F+ +   GI+ N  + N LI+G C+  K+  A +    M     +P+ V+Y+ +I 
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIG 1303

Query: 182  TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             LC+ G V  A  LF EM               +++GLC +G L EA  L + +      
Sbjct: 1304 ALCQSGRVRTAQKLFVEMQ-TCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHK 1362

Query: 362  ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
             ++  ++ L+ G C  G+LEEA + FDE+   G+ PDT+ ++ILI+  C  GM  +
Sbjct: 1363 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 1418



 Score = 92.8 bits (229), Expect = 9e-17
 Identities = 58/173 (33%), Positives = 85/173 (49%)
 Frame = +2

Query: 11   VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
            VF    K G +P+AVT  TL+ G+     +  A+QL + M K     +  +Y  +I+ LC
Sbjct: 1003 VFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLC 1062

Query: 191  KGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGISADV 370
            K      A+ L  +M G+            +I+ LC  G   EA  +  EM   GI  DV
Sbjct: 1063 KARKTGLAIKLHEKMKGNCKGDVFTYGM--IIDALCKDGMTTEALDMFSEMIGAGILPDV 1120

Query: 371  TTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
              Y+SL+ G C  G L+EA  +F EM  RGIS D  T++ LI    + G+ ++
Sbjct: 1121 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKE 1173



 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 53/165 (32%), Positives = 86/165 (52%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
            A K+F +M   G      T   L+ GLC+ G +  A+ L  ++ K   +PN+  +S ++D
Sbjct: 1314 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLD 1373

Query: 182  TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             +C+ G ++EA   F E +  +           +INGLCN G L+EA +LL +M ++G  
Sbjct: 1374 GMCRAGKLEEAWKQFDE-ISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 1432

Query: 362  ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILI 496
             D  T+N +I       E+ EA +  +EM +R  SPD    S+L+
Sbjct: 1433 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477


>ref|XP_007035008.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508714037|gb|EOY05934.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 644

 Score =  152 bits (383), Expect = 1e-34
 Identities = 80/172 (46%), Positives = 109/172 (63%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A++VFDK+ + G Q +  T   LI+GLC+I +   AL+L   M + NC   +V YS IID
Sbjct: 174 AVQVFDKINERGFQGDVFTYGILITGLCKIHETNFALKLYRKMAERNCGGTLVIYSMIID 233

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           +LCK  LVDE + +F EM+             S+I+GLC+ GRL EA +  +EM  RGI+
Sbjct: 234 SLCKDRLVDEGVNMFFEMVSKGINPDVVVYS-SLISGLCSLGRLKEAVKFFDEMVGRGIA 292

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDG 517
           AD+  YNSLIHG+C  G  +EA R F+ M++ GI PD VTF+ LID  CK+G
Sbjct: 293 ADLVMYNSLIHGYCQVGMWKEAMRIFNRMVEEGIFPDVVTFTTLIDCLCKEG 344



 Score =  114 bits (285), Expect = 3e-23
 Identities = 61/172 (35%), Positives = 102/172 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+K FD+M   GI  + V  N+LI G C++G    A+++ N M +    P+VV+++ +ID
Sbjct: 279 AVKFFDEMVGRGIAADLVMYNSLIHGYCQVGMWKEAMRIFNRMVEEGIFPDVVTFTTLID 338

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G V EA  +F  ++             S+++GLC  G+L+EA +L   +AD+G+ 
Sbjct: 339 CLCKEGKVGEAHKIFV-LMRQQGKEPNLFTYNSLMSGLCMVGQLDEAAKLFGMLADQGVE 397

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDG 517
            +  +YN +I+G+C   +++EA + F EM  +G  P+ VTF+ LI + C+ G
Sbjct: 398 PNAFSYNIMINGYCKSRKIDEAFQLFQEMHFQGCKPNAVTFNTLIGALCQAG 449



 Score =  114 bits (285), Expect = 3e-23
 Identities = 60/165 (36%), Positives = 96/165 (58%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F +M   G +PNAVT NTLI  LC+ G++  A ++ + M      P   +Y  ++D
Sbjct: 419 AFQLFQEMHFQGCKPNAVTFNTLIGALCQAGRLRTAEKMYHEMHACGQSPIFSTYVVMLD 478

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G +DEA+ LF   LG +           +I+G+C +GRL EA  +  E+  +G+ 
Sbjct: 479 GLCKNGHIDEAIALFHS-LGSTKYKSSIELCSILIDGMCRTGRLEEAMNMFNEIPKKGLV 537

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILI 496
            DV TYN +I+G C  G L EA +   +M ++G  P++++F+I+I
Sbjct: 538 PDVVTYNIMINGLCKKGMLLEADKLLIDMEEKGCLPNSISFNIII 582



 Score =  112 bits (279), Expect = 1e-22
 Identities = 63/176 (35%), Positives = 99/176 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++F++M + GI P+ VT  TLI  LC+ GKVG A ++   M +    PN+ +Y++++ 
Sbjct: 314 AMRIFNRMVEEGIFPDVVTFTTLIDCLCKEGKVGEAHKIFVLMRQQGKEPNLFTYNSLMS 373

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LC  G +DEA  LF  ML D            MING C S +++EA +L +EM  +G  
Sbjct: 374 GLCMVGQLDEAAKLFG-MLADQGVEPNAFSYNIMINGYCKSRKIDEAFQLFQEMHFQGCK 432

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            +  T+N+LI   C  G L  A + + EM   G SP   T+ +++D  CK+G  ++
Sbjct: 433 PNAVTFNTLIGALCQAGRLRTAEKMYHEMHACGQSPIFSTYVVMLDGLCKNGHIDE 488



 Score =  110 bits (276), Expect = 3e-22
 Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A K+F  +   G++PNA + N +I+G C+  K+  A QL   M    C+PN V+++ +I 
Sbjct: 384 AAKLFGMLADQGVEPNAFSYNIMINGYCKSRKIDEAFQLFQEMHFQGCKPNAVTFNTLIG 443

Query: 182 TLCKGGLVDEALILFSEM--LGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRG 355
            LC+ G +  A  ++ EM   G S           M++GLC +G ++EA  L   +    
Sbjct: 444 ALCQAGRLRTAEKMYHEMHACGQSPIFSTYVV---MLDGLCKNGHIDEAIALFHSLGSTK 500

Query: 356 ISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGM 520
             + +   + LI G C  G LEEA   F+E+  +G+ PD VT++I+I+  CK GM
Sbjct: 501 YKSSIELCSILIDGMCRTGRLEEAMNMFNEIPKKGLVPDVVTYNIMINGLCKKGM 555


>ref|XP_010650040.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
          Length = 504

 Score =  151 bits (381), Expect = 2e-34
 Identities = 82/172 (47%), Positives = 111/172 (64%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++FD+MT+ G+  +A T   LI+GLC+  K G A++L   M K NC+ +V +Y  IID
Sbjct: 96  AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIID 154

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           +LCK G+  EAL +FSEM+G +          S+++GLC  GRL EA    +EM  RGIS
Sbjct: 155 SLCKDGMTTEALDMFSEMIG-AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDG 517
           ADV TYNSLIHG    G  +E   + + M+DRG SPD  TF+ILID  CK+G
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 265



 Score =  111 bits (277), Expect = 2e-22
 Identities = 62/172 (36%), Positives = 96/172 (55%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A++ F +M   GI  +  T N+LI GL R G         N M      P+  +++ +ID
Sbjct: 200 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 259

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G V EA  +  E++             +++NGLC  G+L +A +L E +ADRGI 
Sbjct: 260 GLCKEGKVGEAQQIL-ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK 318

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDG 517
            +V +YN LI+G+C   +++EA R F+EM  +G+ P TVT++ LI + C+ G
Sbjct: 319 LNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370



 Score =  104 bits (259), Expect = 3e-20
 Identities = 57/176 (32%), Positives = 92/176 (52%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A K+F+ +   GI+ N  + N LI+G C+  K+  A +L   M     +P+ V+Y+ +I 
Sbjct: 305 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIG 364

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LC+ G V  A  LF EM               +++GLC +G L EA  L + +      
Sbjct: 365 ALCQSGRVRTAQKLFVEMQ-TCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHK 423

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++  ++ L+ G C  G+LEEA + FDE+   G+ PDT+ ++ILI+  C  GM  +
Sbjct: 424 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 479



 Score =  101 bits (251), Expect = 3e-19
 Identities = 54/165 (32%), Positives = 94/165 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F++M   G++P+ VT NTLI  LC+ G+V  A +L   M        + +Y  ++D
Sbjct: 340 AFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 399

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G ++EA+ LF + +  +           +++G+C +G+L EA +  +E++  G+ 
Sbjct: 400 GLCKNGHLEEAIDLF-QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILI 496
            D   YN LI+G C  G L EA +   +M ++G  PD++TF+ L+
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNKLL 503



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 57/173 (32%), Positives = 85/173 (49%)
 Frame = +2

Query: 11  VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
           VF    K G +P+AVT  TL+ G+     +  A+QL + M +     +  +Y  +I+ LC
Sbjct: 64  VFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLC 123

Query: 191 KGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGISADV 370
           K      A+ L  +M G+            +I+ LC  G   EA  +  EM   GI  DV
Sbjct: 124 KARKTGLAIKLHEKMKGNCKGDVFTYGM--IIDSLCKDGMTTEALDMFSEMIGAGILPDV 181

Query: 371 TTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
             Y+SL+ G C  G L+EA  +F EM  RGIS D  T++ LI    + G+ ++
Sbjct: 182 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKE 234


>emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  151 bits (381), Expect = 2e-34
 Identities = 82/172 (47%), Positives = 111/172 (64%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++FD+MT+ G+  +A T   LI+GLC+  K G A++L   M K NC+ +V +Y  IID
Sbjct: 96  AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIID 154

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           +LCK G+  EAL +FSEM+G +          S+++GLC  GRL EA    +EM  RGIS
Sbjct: 155 SLCKDGMTTEALDMFSEMIG-AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDG 517
           ADV TYNSLIHG    G  +E   + + M+DRG SPD  TF+ILID  CK+G
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 265



 Score =  111 bits (277), Expect = 2e-22
 Identities = 62/172 (36%), Positives = 96/172 (55%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A++ F +M   GI  +  T N+LI GL R G         N M      P+  +++ +ID
Sbjct: 200 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 259

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G V EA  +  E++             +++NGLC  G+L +A +L E +ADRGI 
Sbjct: 260 GLCKEGKVGEAQQIL-ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK 318

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDG 517
            +V +YN LI+G+C   +++EA R F+EM  +G+ P TVT++ LI + C+ G
Sbjct: 319 LNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370



 Score =  105 bits (261), Expect = 2e-20
 Identities = 55/171 (32%), Positives = 98/171 (57%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F++M   G++P+ VT NTLI  LC+ G+V  A +L   M        + +Y  ++D
Sbjct: 340 AFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 399

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G ++EA+ LF + +  +           +++G+C +G+L EA +  +E++  G+ 
Sbjct: 400 GLCKNGHLEEAIDLF-QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKD 514
            D   YN LI+G C  G L EA +   +M ++G  PD++TF+++I +  K+
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509



 Score =  104 bits (259), Expect = 3e-20
 Identities = 57/176 (32%), Positives = 92/176 (52%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A K+F+ +   GI+ N  + N LI+G C+  K+  A +L   M     +P+ V+Y+ +I 
Sbjct: 305 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIG 364

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LC+ G V  A  LF EM               +++GLC +G L EA  L + +      
Sbjct: 365 ALCQSGRVRTAQKLFVEMQ-TCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHK 423

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++  ++ L+ G C  G+LEEA + FDE+   G+ PDT+ ++ILI+  C  GM  +
Sbjct: 424 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 479



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 57/173 (32%), Positives = 85/173 (49%)
 Frame = +2

Query: 11  VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
           VF    K G +P+AVT  TL+ G+     +  A+QL + M +     +  +Y  +I+ LC
Sbjct: 64  VFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLC 123

Query: 191 KGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGISADV 370
           K      A+ L  +M G+            +I+ LC  G   EA  +  EM   GI  DV
Sbjct: 124 KARKTGLAIKLHEKMKGNCKGDVFTYGM--IIDSLCKDGMTTEALDMFSEMIGAGILPDV 181

Query: 371 TTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
             Y+SL+ G C  G L+EA  +F EM  RGIS D  T++ LI    + G+ ++
Sbjct: 182 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKE 234


>ref|XP_012442134.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Gossypium raimondii]
          Length = 420

 Score =  149 bits (376), Expect = 8e-34
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +FD+MT+   QPN +  NT++ GLC+ G   RA++    M      PN+V+YS +ID
Sbjct: 82  AVCMFDEMTEKEYQPNLIVYNTVLKGLCKTGNTDRAVRFLRLMESRGFEPNIVAYSTVID 141

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL L SEM               +I+G+CNSG+  EA RLL EM D  IS
Sbjct: 142 CLCKNGLLQEALNLLSEMKVKGIRPNIITYTC-LIHGMCNSGQQEEATRLLNEMLDNNIS 200

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++ TYN+L+   C  G + +A    D M  +GI PD VT++ L+D+HCK+GM  +
Sbjct: 201 LNIVTYNTLVDALCKEGTISKAVEIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSE 256



 Score =  122 bits (307), Expect = 8e-26
 Identities = 59/170 (34%), Positives = 101/170 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +  +M   GI+PN +T   LI G+C  G+   A +L N M   N   N+V+Y+ ++D
Sbjct: 152 ALNLLSEMKVKGIRPNIITYTCLIHGMCNSGQQEEATRLLNEMLDNNISLNIVTYNTLVD 211

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G + +A+ +   M              ++++  C  G ++EA  +++EM  RGI 
Sbjct: 212 ALCKEGTISKAVEIVDTMRKQGIEPDVVTYN-TLVDAHCKEGMVSEAEDIVDEMIKRGIE 270

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            DV TY++LI+ HCL  E+++ARR F+ M+++G +P+ VT+S +I+ +CK
Sbjct: 271 PDVVTYSALINAHCLQNEMDKARRVFNLMIEKGCAPNIVTYSTMINGYCK 320



 Score =  117 bits (292), Expect = 4e-24
 Identities = 61/178 (34%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++ D M K GI+P+ VT NTL+   C+ G V  A  + + M K    P+VV+YSA+I+
Sbjct: 222 AVEIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSEAEDIVDEMIKRGIEPDVVTYSALIN 281

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCN--SGRLNEARRLLEEMADRG 355
             C    +D+A  +F+ M+ +           +MING C   +G + EA +L + M + G
Sbjct: 282 AHCLQNEMDKARRVFNLMI-EKGCAPNIVTYSTMINGYCKGKTGHIEEALKLFQAMRNSG 340

Query: 356 ISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
           +  D+  YN LI   C  G +E A+  F ++ D G+ PD VT+  +I+  CK+G+ ++
Sbjct: 341 LELDIVPYNILIDELCKAGHIEFAKELFHQLSDNGLKPDVVTYCTMINGLCKEGLPDE 398



 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
 Frame = +2

Query: 11  VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
           + D+M K GI+P+ VT + LI+  C   ++ +A ++ N M +  C PN+V+YS +I+  C
Sbjct: 260 IVDEMIKRGIEPDVVTYSALINAHCLQNEMDKARRVFNLMIEKGCAPNIVTYSTMINGYC 319

Query: 191 KG--GLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGISA 364
           KG  G ++EAL LF  M  +S           +I+ LC +G +  A+ L  +++D G+  
Sbjct: 320 KGKTGHIEEALKLFQAMR-NSGLELDIVPYNILIDELCKAGHIEFAKELFHQLSDNGLKP 378

Query: 365 DVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSI 490
           DV TY ++I+G C  G  +EA R F  M D    P++  +++
Sbjct: 379 DVVTYCTMINGLCKEGLPDEAYRLFGSMGDNDFLPNSCCYNL 420



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 28/84 (33%), Positives = 51/84 (60%)
 Frame = +2

Query: 278 SMINGLCNSGRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDR 457
           ++INGLCN  +++EA  + +EM ++    ++  YN+++ G C  G  + A R+   M  R
Sbjct: 68  TLINGLCNPSKISEAVCMFDEMTEKEYQPNLIVYNTVLKGLCKTGNTDRAVRFLRLMESR 127

Query: 458 GISPDTVTFSILIDSHCKDGMTED 529
           G  P+ V +S +ID  CK+G+ ++
Sbjct: 128 GFEPNIVAYSTVIDCLCKNGLLQE 151



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/82 (39%), Positives = 48/82 (58%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+K+F  M   G++ + V  N LI  LC+ G +  A +L + +     +P+VV+Y  +I+
Sbjct: 329 ALKLFQAMRNSGLELDIVPYNILIDELCKAGHIEFAKELFHQLSDNGLKPDVVTYCTMIN 388

Query: 182 TLCKGGLVDEALILFSEMLGDS 247
            LCK GL DEA  LF  M GD+
Sbjct: 389 GLCKEGLPDEAYRLFGSM-GDN 409


>ref|XP_012441324.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like isoform X3 [Gossypium raimondii]
          Length = 877

 Score =  149 bits (376), Expect = 8e-34
 Identities = 75/176 (42%), Positives = 106/176 (60%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +FD+MT+ G QPN +  +T++ GLC+ G +GRA++    M      PN V+YS +ID
Sbjct: 170 AVCMFDEMTEKGYQPNLIVYSTMLKGLCKTGNIGRAVRFLRLMESRGYEPNNVAYSTVID 229

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL LFSE L              +I+G+CN G+  EA RLL E+ D  IS
Sbjct: 230 CLCKNGLLQEALDLFSE-LKVKGIRPDIFTYNCLIHGMCNLGQQEEATRLLNEIVDNNIS 288

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+ TYN LI   C  G + +A    D M  +GI P+ VT++ L+D+HCK+GM  +
Sbjct: 289 LDIVTYNLLIDALCKEGTISKAVETVDMMRKQGIEPNVVTYNTLVDAHCKEGMVSE 344



 Score =  123 bits (309), Expect = 5e-26
 Identities = 59/170 (34%), Positives = 104/170 (61%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F ++   GI+P+  T N LI G+C +G+   A +L N +   N   ++V+Y+ +ID
Sbjct: 240 ALDLFSELKVKGIRPDIFTYNCLIHGMCNLGQQEEATRLLNEIVDNNISLDIVTYNLLID 299

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G + +A+    +M+             ++++  C  G ++EA  +++ M  RGI 
Sbjct: 300 ALCKEGTISKAVETV-DMMRKQGIEPNVVTYNTLVDAHCKEGMVSEAEDIVDAMIKRGIE 358

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            DV TY++LI+GHCL  E+++ARR F+ M+++G +PD VT+S +I+ +CK
Sbjct: 359 PDVVTYSALINGHCLQNEMDKARRVFNLMIEKGCAPDIVTYSTMINGYCK 408



 Score =  118 bits (295), Expect = 2e-24
 Identities = 61/187 (32%), Positives = 106/187 (56%), Gaps = 20/187 (10%)
 Frame = +2

Query: 11  VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
           + D M K GI+P+ VT + LI+G C   ++ +A ++ N M +  C P++V+YS +I+  C
Sbjct: 348 IVDAMIKRGIEPDVVTYSALINGHCLQNEMDKARRVFNLMIEKGCAPDIVTYSTMINGYC 407

Query: 191 KGGLVDEALILFSE--------------------MLGDSXXXXXXXXXXSMINGLCNSGR 310
           KG  +D+A+ LF E                    M+             ++++  C  G 
Sbjct: 408 KGERLDKAMELFHEISRKGPFPDTVTYNTVETVDMMRKQGIELNVVTYNTLVDAHCKEGM 467

Query: 311 LNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSI 490
           ++EA+ +++ M  RGI  DV TY++LI+GHCL  E+++ARR F+ M+++G +   VT+S 
Sbjct: 468 VSEAKDIVDAMIKRGIEPDVVTYSALINGHCLQNEMDKARRVFNLMIEKGCASGIVTYST 527

Query: 491 LIDSHCK 511
           +I+ +CK
Sbjct: 528 MINGYCK 534



 Score =  117 bits (294), Expect = 3e-24
 Identities = 60/187 (32%), Positives = 105/187 (56%), Gaps = 20/187 (10%)
 Frame = +2

Query: 11   VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
            + D M K GI+P+ VT + LI+G C   ++ +A ++ N M +  C   +V+YS +I+  C
Sbjct: 474  IVDAMIKRGIEPDVVTYSALINGHCLQNEMDKARRVFNLMIEKGCASGIVTYSTMINGYC 533

Query: 191  KGGLVDEALILFSE--------------------MLGDSXXXXXXXXXXSMINGLCNSGR 310
            KG  +D+A+ LF E                    M+             ++++  C  G 
Sbjct: 534  KGKRLDKAMELFHEISRKGPLPDTVTYNTVETVDMMRKQGIEPNVVTYNTLVDAHCKEGM 593

Query: 311  LNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSI 490
            ++EA  +++ M  RGI  DV TY++L++GHCL  ++++ARR F+ M+++G +PD VT+S 
Sbjct: 594  VSEAEDIVDAMIKRGIEPDVVTYSALVNGHCLQNKMDKARRVFNLMIEKGCAPDIVTYST 653

Query: 491  LIDSHCK 511
            +I+ +CK
Sbjct: 654  MINGYCK 660



 Score =  110 bits (274), Expect = 5e-22
 Identities = 65/189 (34%), Positives = 94/189 (49%), Gaps = 21/189 (11%)
 Frame = +2

Query: 5    IKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDT 184
            ++  D M K GI+ N VT NTL+   C+ G V  A  + + M K    P+VV+YSA+I+ 
Sbjct: 437  VETVDMMRKQGIELNVVTYNTLVDAHCKEGMVSEAKDIVDAMIKRGIEPDVVTYSALING 496

Query: 185  LCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEE-------- 340
             C    +D+A  +F+ M+ +           +MING C   RL++A  L  E        
Sbjct: 497  HCLQNEMDKARRVFNLMI-EKGCASGIVTYSTMINGYCKGKRLDKAMELFHEISRKGPLP 555

Query: 341  -------------MADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVT 481
                         M  +GI  +V TYN+L+  HC  G + EA    D M+ RGI PD VT
Sbjct: 556  DTVTYNTVETVDMMRKQGIEPNVVTYNTLVDAHCKEGMVSEAEDIVDAMIKRGIEPDVVT 615

Query: 482  FSILIDSHC 508
            +S L++ HC
Sbjct: 616  YSALVNGHC 624



 Score =  108 bits (270), Expect = 2e-21
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 34/207 (16%)
 Frame = +2

Query: 11   VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
            + D M K GI+P+ VT + L++G C   K+ +A ++ N M +  C P++V+YS +I+  C
Sbjct: 600  IVDAMIKRGIEPDVVTYSALVNGHCLQNKMDKARRVFNLMIEKGCAPDIVTYSTMINGYC 659

Query: 191  KGGLVDEALILFSEM---------------------LGD-------------SXXXXXXX 268
            KG  +DEA+ LF E+                     LG              S       
Sbjct: 660  KGKRLDEAMELFHEISRNGPIPDTVTYNTLMQSMFQLGKVSTACELFRKMLASGQVPDIV 719

Query: 269  XXXSMINGLCNSGRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEM 448
                +++GLC +G + EA +L + M + G+  D+  Y  LI G C  G +E A+  F ++
Sbjct: 720  TCLILLDGLCKTGHIEEALKLFQAMQNSGLELDIVPYTILIDGFCKAGHIEVAKELFHQL 779

Query: 449  MDRGISPDTVTFSILIDSHCKDGMTED 529
             + G+ P+ VT+ ++I+  CK+G+ ++
Sbjct: 780  SNNGLKPNVVTYCVMINRLCKEGLPDE 806



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 21/188 (11%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNN------------------ 127
            A +VF+ M + G     VT +T+I+G C+  ++ +A++L +                   
Sbjct: 506  ARRVFNLMIEKGCASGIVTYSTMINGYCKGKRLDKAMELFHEISRKGPLPDTVTYNTVET 565

Query: 128  ---MGKWNCRPNVVSYSAIIDTLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLC 298
               M K    PNVV+Y+ ++D  CK G+V EA  +   M+             +++NG C
Sbjct: 566  VDMMRKQGIEPNVVTYNTLVDAHCKEGMVSEAEDIVDAMI-KRGIEPDVVTYSALVNGHC 624

Query: 299  NSGRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTV 478
               ++++ARR+   M ++G + D+ TY+++I+G+C    L+EA   F E+   G  PDTV
Sbjct: 625  LQNKMDKARRVFNLMIEKGCAPDIVTYSTMINGYCKGKRLDEAMELFHEISRNGPIPDTV 684

Query: 479  TFSILIDS 502
            T++ L+ S
Sbjct: 685  TYNTLMQS 692



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 51/174 (29%), Positives = 95/174 (54%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
            A+++F ++++ G  P+ VT NTL+  + ++GKV  A +L   M      P++V+   ++D
Sbjct: 667  AMELFHEISRNGPIPDTVTYNTLMQSMFQLGKVSTACELFRKMLASGQVPDIVTCLILLD 726

Query: 182  TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             LCK G ++EAL LF  M  +S           +I+G C +G +  A+ L  ++++ G+ 
Sbjct: 727  GLCKTGHIEEALKLFQAMQ-NSGLELDIVPYTILIDGFCKAGHIEVAKELFHQLSNNGLK 785

Query: 362  ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMT 523
             +V TY  +I+  C  G  +EA R+F  M D    P++  ++++I    ++  T
Sbjct: 786  PNVVTYCVMINRLCKEGLPDEAYRWFGSMGDNNCLPNSCCYNVMIRGFLRNSYT 839



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 52/166 (31%), Positives = 80/166 (48%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
            A ++F KM   G  P+ VTC  L+ GLC+ G +  AL+L   M       ++V Y+ +ID
Sbjct: 702  ACELFRKMLASGQVPDIVTCLILLDGLCKTGHIEEALKLFQAMQNSGLELDIVPYTILID 761

Query: 182  TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
              CK G ++ A  LF + L ++           MIN LC  G  +EA R    M D    
Sbjct: 762  GFCKAGHIEVAKELFHQ-LSNNGLKPNVVTYCVMINRLCKEGLPDEAYRWFGSMGDNNCL 820

Query: 362  ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILID 499
             +   YN +I G   +    +A +   EM+ +G S D +T ++ +D
Sbjct: 821  PNSCCYNVMIRGFLRNSYTSKATQLLMEMVGKGFSADIITATLFMD 866



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 39/176 (22%), Positives = 84/176 (47%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ + + M +   +P+ V    L+  + ++      +     +       +  S S +I+
Sbjct: 65  ALSLVNMMIEKYPKPSIVEFTKLLGAIVKMKHYAIVVSKYRQIELLGVSHDSYSMSILIN 124

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             C+ G +D    +  ++L             ++INGLC+  +++EA  + +EM ++G  
Sbjct: 125 CFCQLGRIDFGFSVLGKLL-KLGVEPSAVTFSTLINGLCSQSKISEAVCMFDEMTEKGYQ 183

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++  Y++++ G C  G +  A R+   M  RG  P+ V +S +ID  CK+G+ ++
Sbjct: 184 PNLIVYSTMLKGLCKTGNIGRAVRFLRLMESRGYEPNNVAYSTVIDCLCKNGLLQE 239


>gb|KJB61723.1| hypothetical protein B456_009G378400, partial [Gossypium raimondii]
          Length = 478

 Score =  149 bits (376), Expect = 8e-34
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +FD+MT+   QPN +  NT++ GLC+ G   RA++    M      PN+V+YS +ID
Sbjct: 72  AVCMFDEMTEKEYQPNLIVYNTVLKGLCKTGNTDRAVRFLRLMESRGFEPNIVAYSTVID 131

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL L SEM               +I+G+CNSG+  EA RLL EM D  IS
Sbjct: 132 CLCKNGLLQEALNLLSEMKVKGIRPNIITYTC-LIHGMCNSGQQEEATRLLNEMLDNNIS 190

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++ TYN+L+   C  G + +A    D M  +GI PD VT++ L+D+HCK+GM  +
Sbjct: 191 LNIVTYNTLVDALCKEGTISKAVEIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSE 246



 Score =  122 bits (307), Expect = 8e-26
 Identities = 59/170 (34%), Positives = 101/170 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +  +M   GI+PN +T   LI G+C  G+   A +L N M   N   N+V+Y+ ++D
Sbjct: 142 ALNLLSEMKVKGIRPNIITYTCLIHGMCNSGQQEEATRLLNEMLDNNISLNIVTYNTLVD 201

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G + +A+ +   M              ++++  C  G ++EA  +++EM  RGI 
Sbjct: 202 ALCKEGTISKAVEIVDTMRKQGIEPDVVTYN-TLVDAHCKEGMVSEAEDIVDEMIKRGIE 260

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            DV TY++LI+ HCL  E+++ARR F+ M+++G +P+ VT+S +I+ +CK
Sbjct: 261 PDVVTYSALINAHCLQNEMDKARRVFNLMIEKGCAPNIVTYSTMINGYCK 310



 Score =  107 bits (267), Expect = 4e-21
 Identities = 55/176 (31%), Positives = 99/176 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A +VF+ M + G  PN VT +T+I+G C+  ++  A++L + + +    PN+ +Y+ ++ 
Sbjct: 282 ARRVFNLMIEKGCAPNIVTYSTMINGYCKGKRLDEAMELFHEISQKGPIPNIYTYNTLLQ 341

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           ++ + G V  A  LF +ML  S           ++NGL  +G + EA +L + M + G+ 
Sbjct: 342 SMFQLGKVSTACELFRKMLA-SGQVPDLVTCLILLNGLGKTGHIEEALKLFQAMRNSGLE 400

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+  YN LI   C  G +E A+  F ++ D G+ PD VT+  +I+  CK+G+ ++
Sbjct: 401 LDIVPYNILIDELCKAGHIEFAKELFHQLSDNGLKPDVVTYCTMINGLCKEGLPDE 456



 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 50/163 (30%), Positives = 89/163 (54%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++F ++++ G  PN  T NTL+  + ++GKV  A +L   M      P++V+   +++
Sbjct: 317 AMELFHEISQKGPIPNIYTYNTLLQSMFQLGKVSTACELFRKMLASGQVPDLVTCLILLN 376

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            L K G ++EAL LF  M  +S           +I+ LC +G +  A+ L  +++D G+ 
Sbjct: 377 GLGKTGHIEEALKLFQAMR-NSGLELDIVPYNILIDELCKAGHIEFAKELFHQLSDNGLK 435

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSI 490
            DV TY ++I+G C  G  +EA R F  M D    P++  +++
Sbjct: 436 PDVVTYCTMINGLCKEGLPDEAYRLFGSMGDNDFLPNSCCYNL 478



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 28/84 (33%), Positives = 51/84 (60%)
 Frame = +2

Query: 278 SMINGLCNSGRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDR 457
           ++INGLCN  +++EA  + +EM ++    ++  YN+++ G C  G  + A R+   M  R
Sbjct: 58  TLINGLCNPSKISEAVCMFDEMTEKEYQPNLIVYNTVLKGLCKTGNTDRAVRFLRLMESR 117

Query: 458 GISPDTVTFSILIDSHCKDGMTED 529
           G  P+ V +S +ID  CK+G+ ++
Sbjct: 118 GFEPNIVAYSTVIDCLCKNGLLQE 141


>gb|KJB61722.1| hypothetical protein B456_009G378400 [Gossypium raimondii]
          Length = 415

 Score =  149 bits (376), Expect = 8e-34
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +FD+MT+   QPN +  NT++ GLC+ G   RA++    M      PN+V+YS +ID
Sbjct: 77  AVCMFDEMTEKEYQPNLIVYNTVLKGLCKTGNTDRAVRFLRLMESRGFEPNIVAYSTVID 136

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL L SEM               +I+G+CNSG+  EA RLL EM D  IS
Sbjct: 137 CLCKNGLLQEALNLLSEMKVKGIRPNIITYTC-LIHGMCNSGQQEEATRLLNEMLDNNIS 195

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++ TYN+L+   C  G + +A    D M  +GI PD VT++ L+D+HCK+GM  +
Sbjct: 196 LNIVTYNTLVDALCKEGTISKAVEIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSE 251



 Score =  122 bits (307), Expect = 8e-26
 Identities = 59/170 (34%), Positives = 101/170 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +  +M   GI+PN +T   LI G+C  G+   A +L N M   N   N+V+Y+ ++D
Sbjct: 147 ALNLLSEMKVKGIRPNIITYTCLIHGMCNSGQQEEATRLLNEMLDNNISLNIVTYNTLVD 206

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G + +A+ +   M              ++++  C  G ++EA  +++EM  RGI 
Sbjct: 207 ALCKEGTISKAVEIVDTMRKQGIEPDVVTYN-TLVDAHCKEGMVSEAEDIVDEMIKRGIE 265

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            DV TY++LI+ HCL  E+++ARR F+ M+++G +P+ VT+S +I+ +CK
Sbjct: 266 PDVVTYSALINAHCLQNEMDKARRVFNLMIEKGCAPNIVTYSTMINGYCK 315



 Score =  117 bits (292), Expect = 4e-24
 Identities = 61/178 (34%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++ D M K GI+P+ VT NTL+   C+ G V  A  + + M K    P+VV+YSA+I+
Sbjct: 217 AVEIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSEAEDIVDEMIKRGIEPDVVTYSALIN 276

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCN--SGRLNEARRLLEEMADRG 355
             C    +D+A  +F+ M+ +           +MING C   +G + EA +L + M + G
Sbjct: 277 AHCLQNEMDKARRVFNLMI-EKGCAPNIVTYSTMINGYCKGKTGHIEEALKLFQAMRNSG 335

Query: 356 ISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
           +  D+  YN LI   C  G +E A+  F ++ D G+ PD VT+  +I+  CK+G+ ++
Sbjct: 336 LELDIVPYNILIDELCKAGHIEFAKELFHQLSDNGLKPDVVTYCTMINGLCKEGLPDE 393



 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 55/162 (33%), Positives = 92/162 (56%), Gaps = 2/162 (1%)
 Frame = +2

Query: 11  VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
           + D+M K GI+P+ VT + LI+  C   ++ +A ++ N M +  C PN+V+YS +I+  C
Sbjct: 255 IVDEMIKRGIEPDVVTYSALINAHCLQNEMDKARRVFNLMIEKGCAPNIVTYSTMINGYC 314

Query: 191 KG--GLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGISA 364
           KG  G ++EAL LF  M  +S           +I+ LC +G +  A+ L  +++D G+  
Sbjct: 315 KGKTGHIEEALKLFQAMR-NSGLELDIVPYNILIDELCKAGHIEFAKELFHQLSDNGLKP 373

Query: 365 DVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSI 490
           DV TY ++I+G C  G  +EA R F  M D    P++  +++
Sbjct: 374 DVVTYCTMINGLCKEGLPDEAYRLFGSMGDNDFLPNSCCYNL 415



 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 34/205 (16%)
 Frame = +2

Query: 5   IKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDT 184
           +  + ++  +G+  N  + N LI+  C++G++     +   M K    P  V++S +I+ 
Sbjct: 8   VSKYRQIELLGVSHNVYSMNILINCFCQLGRIDFGFSVLGKMLKLGVEPTAVTFSTLING 67

Query: 185 LCKGGLVDEALILFSEM----------------------------------LGDSXXXXX 262
           LC    + EA+ +F EM                                  +        
Sbjct: 68  LCNPSKISEAVCMFDEMTEKEYQPNLIVYNTVLKGLCKTGNTDRAVRFLRLMESRGFEPN 127

Query: 263 XXXXXSMINGLCNSGRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFD 442
                ++I+ LC +G L EA  LL EM  +GI  ++ TY  LIHG C  G+ EEA R  +
Sbjct: 128 IVAYSTVIDCLCKNGLLQEALNLLSEMKVKGIRPNIITYTCLIHGMCNSGQQEEATRLLN 187

Query: 443 EMMDRGISPDTVTFSILIDSHCKDG 517
           EM+D  IS + VT++ L+D+ CK+G
Sbjct: 188 EMLDNNISLNIVTYNTLVDALCKEG 212



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/82 (39%), Positives = 48/82 (58%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+K+F  M   G++ + V  N LI  LC+ G +  A +L + +     +P+VV+Y  +I+
Sbjct: 324 ALKLFQAMRNSGLELDIVPYNILIDELCKAGHIEFAKELFHQLSDNGLKPDVVTYCTMIN 383

Query: 182 TLCKGGLVDEALILFSEMLGDS 247
            LCK GL DEA  LF  M GD+
Sbjct: 384 GLCKEGLPDEAYRLFGSM-GDN 404


>ref|XP_006382761.1| hypothetical protein POPTR_0005s05170g [Populus trichocarpa]
           gi|550338129|gb|ERP60558.1| hypothetical protein
           POPTR_0005s05170g [Populus trichocarpa]
          Length = 530

 Score =  149 bits (375), Expect = 1e-33
 Identities = 75/176 (42%), Positives = 109/176 (61%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           ++ V  KM K+GI P+A+T N LI+GLC  GK+  A++L N M K    PNV+SY+ +I+
Sbjct: 64  SVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVIN 123

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G    A+ +F +M   +          ++I+ LC    +N+A   L EM +RGI 
Sbjct: 124 GLCKTGNTSMAVDVFKKM-EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIP 182

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            +V TYNS++HG C  G+L EA R F EM+ R + P+TVTF+IL+D  CK+GM  +
Sbjct: 183 PNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSE 238



 Score =  137 bits (344), Expect = 4e-30
 Identities = 64/169 (37%), Positives = 106/169 (62%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++F++M K G +PN ++  T+I+GLC+ G    A+ +   M +  C+PNVV+YS IID
Sbjct: 99  AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIID 158

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           +LCK  LV++A+   SEM+ +           S+++G CN G+LNEA RL +EM  R + 
Sbjct: 159 SLCKDRLVNDAMEFLSEMV-ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVM 217

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHC 508
            +  T+  L+ G C  G + EAR  F+ M+++G+ P+  T++ L+D +C
Sbjct: 218 PNTVTFTILVDGLCKEGMVSEARCVFETMIEKGVEPNIYTYNALMDGYC 266



 Score =  110 bits (276), Expect = 3e-22
 Identities = 59/176 (33%), Positives = 95/176 (53%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F +M    + PN VT   L+ GLC+ G V  A  +   M +    PN+ +Y+A++D
Sbjct: 204 ATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARCVFETMIEKGVEPNIYTYNALMD 263

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             C    ++EA  +F E++              +ING C S R++EA+ LL EM  + ++
Sbjct: 264 GYCLQRQMNEAKEVF-EIMARQGCAPDVRSYNILINGFCKSRRMDEAKSLLAEMYHKALN 322

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D  TY++L+ G C  G  ++A   F EM   G+ P+ VT+SIL+D  CK G  ++
Sbjct: 323 PDTVTYSTLMQGLCQFGRPKDALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDE 378



 Score =  101 bits (251), Expect = 3e-19
 Identities = 52/163 (31%), Positives = 89/163 (54%)
 Frame = +2

Query: 11  VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
           VF+ M + G++PN  T N L+ G C   ++  A ++   M +  C P+V SY+ +I+  C
Sbjct: 242 VFETMIEKGVEPNIYTYNALMDGYCLQRQMNEAKEVFEIMARQGCAPDVRSYNILINGFC 301

Query: 191 KGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGISADV 370
           K   +DEA  L +EM   +          +++ GLC  GR  +A  + +EM   G+  ++
Sbjct: 302 KSRRMDEAKSLLAEMYHKALNPDTVTYS-TLMQGLCQFGRPKDALNIFKEMCSYGLLPNL 360

Query: 371 TTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILID 499
            TY+ L+ G C HG L+EA +    M ++ + P+ V ++ILI+
Sbjct: 361 VTYSILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 403



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 54/171 (31%), Positives = 87/171 (50%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F +M   G+ PN VT + L+ G C+ G +  AL+L  +M +    PN+V Y+ +I+
Sbjct: 344 ALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 403

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            +   G ++ A  LFS++ GD            MI GL   G  +EA  L  +M D G  
Sbjct: 404 GMFIAGKLEVAKELFSKLFGDGIRPTIRTYTV-MIKGLLKEGLSDEAYDLFRKMEDDGFL 462

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKD 514
            +  +YN +I G   + +   A R  DEM+ +  S +  TF +L+D   +D
Sbjct: 463 PNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQD 513



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
 Frame = +2

Query: 128 MGKWNCRPNVVSYSAIIDTLCKGGLVDEALILFSEMLGDSXXXXXXXXXXS-MINGLCNS 304
           M + N RP+VV +   + +  K       + L ++M  D           + +IN LC  
Sbjct: 1   MVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQM--DLFRVTHNVYSLNILINCLCRL 58

Query: 305 GRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTF 484
             ++ +  +L +M   GI  D  T+N+LI+G C  G+++EA   F+EM+ RG  P+ +++
Sbjct: 59  NHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISY 118

Query: 485 SILIDSHCKDGMT 523
           + +I+  CK G T
Sbjct: 119 TTVINGLCKTGNT 131


>ref|XP_012441421.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Gossypium raimondii]
          Length = 588

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ + D+MT+   QPN +  +T++ GLC+ G  GRA++    M    C P++V+YS +ID
Sbjct: 133 AVCILDEMTEKRYQPNLIVYSTMLKGLCKTGNTGRAVRFLRLMESRGCEPDIVAYSTVID 192

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL LFSE+               +I+G+CNSG+  EA RLL EM D  IS
Sbjct: 193 CLCKNGLLQEALDLFSEVKVKGIRPNIFTYTC-LIHGMCNSGQQEEATRLLNEMVDNNIS 251

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
             + TY  LI   C  G + +A    D M  +GI PD VT++IL+D+HCK+GM  +
Sbjct: 252 LGIVTYTLLIDALCKEGMIFKAVEIVDTMRKQGIVPDVVTYNILVDAHCKEGMVSE 307



 Score =  114 bits (286), Expect = 2e-23
 Identities = 57/170 (33%), Positives = 98/170 (57%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F ++   GI+PN  T   LI G+C  G+   A +L N M   N    +V+Y+ +ID
Sbjct: 203 ALDLFSEVKVKGIRPNIFTYTCLIHGMCNSGQQEEATRLLNEMVDNNISLGIVTYTLLID 262

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G++ +A+ +   M               +++  C  G ++EA   ++ M  R I 
Sbjct: 263 ALCKEGMIFKAVEIVDTMRKQGIVPDVVTYNI-LVDAHCKEGMVSEAEDFVDAMIKREIE 321

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            +V TY++L++GHCL  E+++ARR F+ M+++G +PD VT+S +I+ +CK
Sbjct: 322 PNVVTYSTLVNGHCLQNEMDKARRVFNLMIEKGCAPDIVTYSTMINGYCK 371



 Score =  106 bits (265), Expect = 6e-21
 Identities = 54/176 (30%), Positives = 100/176 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A +VF+ M + G  P+ VT +T+I+G C+  ++  A++L + + +    PN+ +Y+ ++ 
Sbjct: 343 ARRVFNLMIEKGCAPDIVTYSTMINGYCKGKRLDEAMELFHEISQKGPIPNIFTYNTLLQ 402

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           ++ + G V  A  LF +ML  S           ++NGL  +G + EA +L + M + G+ 
Sbjct: 403 SMFQLGKVSTACELFRKMLA-SGQVPDLVTCLILLNGLGKTGHIEEALKLFQAMRNSGLE 461

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+  YN LI G C  G +E A+  F ++ D G+ P+  T+ I+I+  CK+G+ ++
Sbjct: 462 LDIVPYNILIDGLCKAGHIEFAKELFHQLSDNGLKPNVYTYCIMINGLCKEGLPDE 517



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 52/174 (29%), Positives = 94/174 (54%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++F ++++ G  PN  T NTL+  + ++GKV  A +L   M      P++V+   +++
Sbjct: 378 AMELFHEISQKGPIPNIFTYNTLLQSMFQLGKVSTACELFRKMLASGQVPDLVTCLILLN 437

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            L K G ++EAL LF  M  +S           +I+GLC +G +  A+ L  +++D G+ 
Sbjct: 438 GLGKTGHIEEALKLFQAMR-NSGLELDIVPYNILIDGLCKAGHIEFAKELFHQLSDNGLK 496

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMT 523
            +V TY  +I+G C  G  +EA R F  M D    P++  ++++I    ++  T
Sbjct: 497 PNVYTYCIMINGLCKEGLPDEAYRLFGSMGDNDCLPNSCCYNVMIRGFLRNSYT 550



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 55/166 (33%), Positives = 82/166 (49%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F KM   G  P+ VTC  L++GL + G +  AL+L   M       ++V Y+ +ID
Sbjct: 413 ACELFRKMLASGQVPDLVTCLILLNGLGKTGHIEEALKLFQAMRNSGLELDIVPYNILID 472

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G ++ A  LF + L D+           MINGLC  G  +EA RL   M D    
Sbjct: 473 GLCKAGHIEFAKELFHQ-LSDNGLKPNVYTYCIMINGLCKEGLPDEAYRLFGSMGDNDCL 531

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILID 499
            +   YN +I G   +    +A +   EM+ +G S D  T ++ +D
Sbjct: 532 PNSCCYNVMIRGFLRNSYTSKATQLLTEMVGKGFSADIFTATLFMD 577



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 43/176 (24%), Positives = 85/176 (48%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F+KM +   +P+ V    L+  + ++      +     +       +V S + + +
Sbjct: 28  ALSLFNKMIEKYPKPSIVEFTKLLGAIVKMKHYAIVVSKYRQIELLGVSHDVYSMNILTN 87

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             C+ G +D    +  +ML             ++INGLCN  +++EA  +L+EM ++   
Sbjct: 88  CFCQLGRIDFGFSVLGKML-KLGVEPSGVTYSTLINGLCNQSKISEAVCILDEMTEKRYQ 146

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++  Y++++ G C  G    A R+   M  RG  PD V +S +ID  CK+G+ ++
Sbjct: 147 PNLIVYSTMLKGLCKTGNTGRAVRFLRLMESRGCEPDIVAYSTVIDCLCKNGLLQE 202


>ref|XP_012441419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like isoform X4 [Gossypium raimondii]
          Length = 588

 Score =  148 bits (373), Expect = 2e-33
 Identities = 72/176 (40%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++FD+MT+ G QPN +  +T++ GLC+ G  GRA++    M      P++V+Y+ +ID
Sbjct: 133 AVRMFDEMTEKGYQPNLIVYSTMLKGLCKTGNTGRAVRFLRLMESRGYEPDIVAYNTVID 192

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ E L L SEM               +I+G+CN G+  EA RLL EM D  IS
Sbjct: 193 CLCKNGLLQEVLNLLSEMKVKGIRPNIITYNC-LIHGMCNLGQQEEATRLLNEMVDNNIS 251

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+ TY  LI   C  G + +A +  D M  +GI PD VT++ L+D+HCK+GM  +
Sbjct: 252 LDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSE 307



 Score =  115 bits (288), Expect = 1e-23
 Identities = 55/169 (32%), Positives = 98/169 (57%)
 Frame = +2

Query: 5   IKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDT 184
           + +  +M   GI+PN +T N LI G+C +G+   A +L N M   N   ++V+Y+ +ID 
Sbjct: 204 LNLLSEMKVKGIRPNIITYNCLIHGMCNLGQQEEATRLLNEMVDNNISLDIVTYTLLIDA 263

Query: 185 LCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGISA 364
           LCK G + +A+ +   M              ++++  C  G ++EA   ++ M    I  
Sbjct: 264 LCKEGTISKAVQIVDTMRKQGIEPDVVTYN-TLVDAHCKEGMVSEAEDFVDSMIKLEIEP 322

Query: 365 DVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
           DV TYN+L++GHCL  ++++ARR F+ M++ G +P+ VT++ +I+ +CK
Sbjct: 323 DVVTYNALVNGHCLRNKMDKARRVFNLMIENGCAPNIVTYNTMINGYCK 371



 Score =  107 bits (268), Expect = 3e-21
 Identities = 54/176 (30%), Positives = 100/176 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A +VF+ M + G  PN VT NT+I+G C+  ++ +A++L + + +    P+ V++S ++ 
Sbjct: 343 ARRVFNLMIENGCAPNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQ 402

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           ++ + G V  A  LF +ML  S           + +GLC +G + EA +L + M + G+ 
Sbjct: 403 SMFQLGKVSTACELFRKMLA-SGQVPDIATCLILQDGLCKTGHIEEALKLFQAMRNSGLE 461

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+  Y  LI G C  G +E A+  F ++ + G+ PD  T+ ++I+  CK+G+ ++
Sbjct: 462 LDIVPYTILIDGFCKAGHIEVAKELFHQLSNNGLKPDVYTYCVMINRLCKEGLPDE 517



 Score =  106 bits (264), Expect = 8e-21
 Identities = 55/167 (32%), Positives = 94/167 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++ ++M    I  + VT   LI  LC+ G + +A+Q+ + M K    P+VV+Y+ ++D
Sbjct: 238 ATRLLNEMVDNNISLDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVD 297

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G+V EA      M+             +++NG C   ++++ARR+   M + G +
Sbjct: 298 AHCKEGMVSEAEDFVDSMI-KLEIEPDVVTYNALVNGHCLRNKMDKARRVFNLMIENGCA 356

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDS 502
            ++ TYN++I+G+C    L++A   F E+  +G  PDTVTFSIL+ S
Sbjct: 357 PNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQS 403



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 53/166 (31%), Positives = 78/166 (46%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F KM   G  P+  TC  L  GLC+ G +  AL+L   M       ++V Y+ +ID
Sbjct: 413 ACELFRKMLASGQVPDIATCLILQDGLCKTGHIEEALKLFQAMRNSGLELDIVPYTILID 472

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G ++ A  LF + L ++           MIN LC  G  +EA RL   M D    
Sbjct: 473 GFCKAGHIEVAKELFHQ-LSNNGLKPDVYTYCVMINRLCKEGLPDEAYRLFGSMGDNDCL 531

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILID 499
            D   YN +I G   +    +A +   EM+ +G S D  T ++ +D
Sbjct: 532 PDSCCYNVMIRGFLRNSYTSKATQLLKEMVGKGFSADIFTATLFMD 577



 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 46/176 (26%), Positives = 88/176 (50%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F+KM +   +P+ V  N L+  + ++      +     +       +  S S +I+
Sbjct: 28  ALSLFNKMIEKYPKPSIVEFNKLLGAIVKMKHYAIVVSKYRQIELLGVSHDGYSMSILIN 87

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             C+ G +D  L +  +ML             ++INGLCN  +++EA R+ +EM ++G  
Sbjct: 88  CFCQLGRIDFGLSVLGKML-KLGVEPDVVIFSTLINGLCNQSKISEAVRMFDEMTEKGYQ 146

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++  Y++++ G C  G    A R+   M  RG  PD V ++ +ID  CK+G+ ++
Sbjct: 147 PNLIVYSTMLKGLCKTGNTGRAVRFLRLMESRGYEPDIVAYNTVIDCLCKNGLLQE 202


>ref|XP_012441418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like isoform X3 [Gossypium raimondii]
          Length = 588

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +FD+MT+ G QPN +  +T++ GLC+ G   RA++    M      PN+V+Y+ +ID
Sbjct: 133 AVCMFDEMTEKGYQPNLIVYSTVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVID 192

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL L SEM               +I+G+CN G+  EA RLL EMAD  IS
Sbjct: 193 CLCKNGLLQEALNLLSEMKVKGIRPDIITYTC-LIHGMCNLGQQEEATRLLNEMADNNIS 251

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+ TY  LI   C  G + +A +  D M  +GI PD VT++ L+D+HCK+GM  +
Sbjct: 252 LDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSE 307



 Score =  114 bits (284), Expect = 4e-23
 Identities = 54/170 (31%), Positives = 98/170 (57%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +  +M   GI+P+ +T   LI G+C +G+   A +L N M   N   ++V+Y+ +ID
Sbjct: 203 ALNLLSEMKVKGIRPDIITYTCLIHGMCNLGQQEEATRLLNEMADNNISLDIVTYTLLID 262

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G + +A+ +   M              ++++  C  G ++EA   ++ M    I 
Sbjct: 263 ALCKEGTISKAVQIVDTMRKQGIEPDVVTYN-TLVDAHCKEGMVSEAEDFVDSMIKLEIE 321

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            DV TYN+L++GHCL  ++++ARR F+ M++ G +P+ VT++ +I+ +CK
Sbjct: 322 PDVVTYNALVNGHCLRNKMDKARRVFNLMIENGCAPNIVTYNTMINGYCK 371



 Score =  107 bits (268), Expect = 3e-21
 Identities = 54/176 (30%), Positives = 100/176 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A +VF+ M + G  PN VT NT+I+G C+  ++ +A++L + + +    P+ V++S ++ 
Sbjct: 343 ARRVFNLMIENGCAPNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQ 402

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           ++ + G V  A  LF +ML  S           + +GLC +G + EA +L + M + G+ 
Sbjct: 403 SMFQLGKVSTACELFRKMLA-SGQVPDIATCLILQDGLCKTGHIEEALKLFQAMRNSGLE 461

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+  Y  LI G C  G +E A+  F ++ + G+ PD  T+ ++I+  CK+G+ ++
Sbjct: 462 LDIVPYTILIDGFCKAGHIEVAKELFHQLSNNGLKPDVYTYCVMINRLCKEGLPDE 517



 Score =  106 bits (264), Expect = 8e-21
 Identities = 55/167 (32%), Positives = 94/167 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++ ++M    I  + VT   LI  LC+ G + +A+Q+ + M K    P+VV+Y+ ++D
Sbjct: 238 ATRLLNEMADNNISLDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVD 297

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G+V EA      M+             +++NG C   ++++ARR+   M + G +
Sbjct: 298 AHCKEGMVSEAEDFVDSMI-KLEIEPDVVTYNALVNGHCLRNKMDKARRVFNLMIENGCA 356

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDS 502
            ++ TYN++I+G+C    L++A   F E+  +G  PDTVTFSIL+ S
Sbjct: 357 PNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQS 403



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 53/166 (31%), Positives = 78/166 (46%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F KM   G  P+  TC  L  GLC+ G +  AL+L   M       ++V Y+ +ID
Sbjct: 413 ACELFRKMLASGQVPDIATCLILQDGLCKTGHIEEALKLFQAMRNSGLELDIVPYTILID 472

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G ++ A  LF + L ++           MIN LC  G  +EA RL   M D    
Sbjct: 473 GFCKAGHIEVAKELFHQ-LSNNGLKPDVYTYCVMINRLCKEGLPDEAYRLFGSMGDNDCL 531

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILID 499
            D   YN +I G   +    +A +   EM+ +G S D  T ++ +D
Sbjct: 532 PDSCCYNVMIRGFLRNSYTSKATQLLKEMVGKGFSADIFTATLFMD 577



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F+KM      P+ V    L + + R+ +    + + + M       NV S S +I+
Sbjct: 28  ALSLFNKMIGRYPVPSIVEFTKLFAAIVRMKQHAIVVPMCSQMELLGVSHNVYSMSILIN 87

Query: 182 TLCKGGLVDEALILFSEM--LGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRG 355
             C+ G +D    +  +M  LG            ++INGLCN  +++EA  + +EM ++G
Sbjct: 88  CFCQLGRIDFGFSVLGKMKKLG---VEPSAVTFSTLINGLCNQDKISEAVCMFDEMTEKG 144

Query: 356 ISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
              ++  Y++++ G C  G  + A R+   M  RG  P+ V ++ +ID  CK+G+ ++
Sbjct: 145 YQPNLIVYSTVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVIDCLCKNGLLQE 202


>ref|XP_012441415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like isoform X2 [Gossypium raimondii]
           gi|823217507|ref|XP_012441416.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like isoform X2 [Gossypium raimondii]
           gi|823217509|ref|XP_012441417.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g63330-like isoform X2 [Gossypium raimondii]
          Length = 625

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +FD+MT+ G QPN +  +T++ GLC+ G   RA++    M      PN+V+Y+ +ID
Sbjct: 170 AVCMFDEMTEKGYQPNLIVYSTVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVID 229

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL L SEM               +I+G+CN G+  EA RLL EMAD  IS
Sbjct: 230 CLCKNGLLQEALNLLSEMKVKGIRPDIITYTC-LIHGMCNLGQQEEATRLLNEMADNNIS 288

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+ TY  LI   C  G + +A +  D M  +GI PD VT++ L+D+HCK+GM  +
Sbjct: 289 LDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSE 344



 Score =  114 bits (284), Expect = 4e-23
 Identities = 54/170 (31%), Positives = 98/170 (57%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +  +M   GI+P+ +T   LI G+C +G+   A +L N M   N   ++V+Y+ +ID
Sbjct: 240 ALNLLSEMKVKGIRPDIITYTCLIHGMCNLGQQEEATRLLNEMADNNISLDIVTYTLLID 299

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G + +A+ +   M              ++++  C  G ++EA   ++ M    I 
Sbjct: 300 ALCKEGTISKAVQIVDTMRKQGIEPDVVTYN-TLVDAHCKEGMVSEAEDFVDSMIKLEIE 358

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            DV TYN+L++GHCL  ++++ARR F+ M++ G +P+ VT++ +I+ +CK
Sbjct: 359 PDVVTYNALVNGHCLRNKMDKARRVFNLMIENGCAPNIVTYNTMINGYCK 408



 Score =  107 bits (268), Expect = 3e-21
 Identities = 54/176 (30%), Positives = 100/176 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A +VF+ M + G  PN VT NT+I+G C+  ++ +A++L + + +    P+ V++S ++ 
Sbjct: 380 ARRVFNLMIENGCAPNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQ 439

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           ++ + G V  A  LF +ML  S           + +GLC +G + EA +L + M + G+ 
Sbjct: 440 SMFQLGKVSTACELFRKMLA-SGQVPDIATCLILQDGLCKTGHIEEALKLFQAMRNSGLE 498

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+  Y  LI G C  G +E A+  F ++ + G+ PD  T+ ++I+  CK+G+ ++
Sbjct: 499 LDIVPYTILIDGFCKAGHIEVAKELFHQLSNNGLKPDVYTYCVMINRLCKEGLPDE 554



 Score =  106 bits (264), Expect = 8e-21
 Identities = 55/167 (32%), Positives = 94/167 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++ ++M    I  + VT   LI  LC+ G + +A+Q+ + M K    P+VV+Y+ ++D
Sbjct: 275 ATRLLNEMADNNISLDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVD 334

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G+V EA      M+             +++NG C   ++++ARR+   M + G +
Sbjct: 335 AHCKEGMVSEAEDFVDSMI-KLEIEPDVVTYNALVNGHCLRNKMDKARRVFNLMIENGCA 393

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDS 502
            ++ TYN++I+G+C    L++A   F E+  +G  PDTVTFSIL+ S
Sbjct: 394 PNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQS 440



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 53/166 (31%), Positives = 78/166 (46%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F KM   G  P+  TC  L  GLC+ G +  AL+L   M       ++V Y+ +ID
Sbjct: 450 ACELFRKMLASGQVPDIATCLILQDGLCKTGHIEEALKLFQAMRNSGLELDIVPYTILID 509

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G ++ A  LF + L ++           MIN LC  G  +EA RL   M D    
Sbjct: 510 GFCKAGHIEVAKELFHQ-LSNNGLKPDVYTYCVMINRLCKEGLPDEAYRLFGSMGDNDCL 568

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILID 499
            D   YN +I G   +    +A +   EM+ +G S D  T ++ +D
Sbjct: 569 PDSCCYNVMIRGFLRNSYTSKATQLLKEMVGKGFSADIFTATLFMD 614



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F+KM      P+ V    L + + R+ +    + + + M       NV S S +I+
Sbjct: 65  ALSLFNKMIGRYPVPSIVEFTKLFAAIVRMKQHAIVVPMCSQMELLGVSHNVYSMSILIN 124

Query: 182 TLCKGGLVDEALILFSEM--LGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRG 355
             C+ G +D    +  +M  LG            ++INGLCN  +++EA  + +EM ++G
Sbjct: 125 CFCQLGRIDFGFSVLGKMKKLG---VEPSAVTFSTLINGLCNQDKISEAVCMFDEMTEKG 181

Query: 356 ISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
              ++  Y++++ G C  G  + A R+   M  RG  P+ V ++ +ID  CK+G+ ++
Sbjct: 182 YQPNLIVYSTVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVIDCLCKNGLLQE 239


>ref|XP_012441414.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like isoform X1 [Gossypium raimondii]
          Length = 647

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +FD+MT+ G QPN +  +T++ GLC+ G   RA++    M      PN+V+Y+ +ID
Sbjct: 192 AVCMFDEMTEKGYQPNLIVYSTVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVID 251

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL L SEM               +I+G+CN G+  EA RLL EMAD  IS
Sbjct: 252 CLCKNGLLQEALNLLSEMKVKGIRPDIITYTC-LIHGMCNLGQQEEATRLLNEMADNNIS 310

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+ TY  LI   C  G + +A +  D M  +GI PD VT++ L+D+HCK+GM  +
Sbjct: 311 LDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSE 366



 Score =  114 bits (284), Expect = 4e-23
 Identities = 54/170 (31%), Positives = 98/170 (57%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +  +M   GI+P+ +T   LI G+C +G+   A +L N M   N   ++V+Y+ +ID
Sbjct: 262 ALNLLSEMKVKGIRPDIITYTCLIHGMCNLGQQEEATRLLNEMADNNISLDIVTYTLLID 321

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G + +A+ +   M              ++++  C  G ++EA   ++ M    I 
Sbjct: 322 ALCKEGTISKAVQIVDTMRKQGIEPDVVTYN-TLVDAHCKEGMVSEAEDFVDSMIKLEIE 380

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            DV TYN+L++GHCL  ++++ARR F+ M++ G +P+ VT++ +I+ +CK
Sbjct: 381 PDVVTYNALVNGHCLRNKMDKARRVFNLMIENGCAPNIVTYNTMINGYCK 430



 Score =  107 bits (268), Expect = 3e-21
 Identities = 54/176 (30%), Positives = 100/176 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A +VF+ M + G  PN VT NT+I+G C+  ++ +A++L + + +    P+ V++S ++ 
Sbjct: 402 ARRVFNLMIENGCAPNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQ 461

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           ++ + G V  A  LF +ML  S           + +GLC +G + EA +L + M + G+ 
Sbjct: 462 SMFQLGKVSTACELFRKMLA-SGQVPDIATCLILQDGLCKTGHIEEALKLFQAMRNSGLE 520

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+  Y  LI G C  G +E A+  F ++ + G+ PD  T+ ++I+  CK+G+ ++
Sbjct: 521 LDIVPYTILIDGFCKAGHIEVAKELFHQLSNNGLKPDVYTYCVMINRLCKEGLPDE 576



 Score =  106 bits (264), Expect = 8e-21
 Identities = 55/167 (32%), Positives = 94/167 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++ ++M    I  + VT   LI  LC+ G + +A+Q+ + M K    P+VV+Y+ ++D
Sbjct: 297 ATRLLNEMADNNISLDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVD 356

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G+V EA      M+             +++NG C   ++++ARR+   M + G +
Sbjct: 357 AHCKEGMVSEAEDFVDSMI-KLEIEPDVVTYNALVNGHCLRNKMDKARRVFNLMIENGCA 415

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDS 502
            ++ TYN++I+G+C    L++A   F E+  +G  PDTVTFSIL+ S
Sbjct: 416 PNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQS 462



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 53/166 (31%), Positives = 78/166 (46%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F KM   G  P+  TC  L  GLC+ G +  AL+L   M       ++V Y+ +ID
Sbjct: 472 ACELFRKMLASGQVPDIATCLILQDGLCKTGHIEEALKLFQAMRNSGLELDIVPYTILID 531

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G ++ A  LF + L ++           MIN LC  G  +EA RL   M D    
Sbjct: 532 GFCKAGHIEVAKELFHQ-LSNNGLKPDVYTYCVMINRLCKEGLPDEAYRLFGSMGDNDCL 590

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILID 499
            D   YN +I G   +    +A +   EM+ +G S D  T ++ +D
Sbjct: 591 PDSCCYNVMIRGFLRNSYTSKATQLLKEMVGKGFSADIFTATLFMD 636



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F+KM      P+ V    L + + R+ +    + + + M       NV S S +I+
Sbjct: 87  ALSLFNKMIGRYPVPSIVEFTKLFAAIVRMKQHAIVVPMCSQMELLGVSHNVYSMSILIN 146

Query: 182 TLCKGGLVDEALILFSEM--LGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRG 355
             C+ G +D    +  +M  LG            ++INGLCN  +++EA  + +EM ++G
Sbjct: 147 CFCQLGRIDFGFSVLGKMKKLG---VEPSAVTFSTLINGLCNQDKISEAVCMFDEMTEKG 203

Query: 356 ISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
              ++  Y++++ G C  G  + A R+   M  RG  P+ V ++ +ID  CK+G+ ++
Sbjct: 204 YQPNLIVYSTVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVIDCLCKNGLLQE 261


>gb|KJB61828.1| hypothetical protein B456_009G384200 [Gossypium raimondii]
          Length = 797

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
            A+ +FD+MT+ G QPN +  +T++ GLC+ G   RA++    M      PN+V+Y+ +ID
Sbjct: 567  AVCMFDEMTEKGYQPNLIVYSTVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVID 626

Query: 182  TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             LCK GL+ EAL L SEM               +I+G+CN G+  EA RLL EMAD  IS
Sbjct: 627  CLCKNGLLQEALNLLSEMKVKGIRPDIITYTC-LIHGMCNLGQQEEATRLLNEMADNNIS 685

Query: 362  ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
             D+ TY  LI   C  G + +A +  D M  +GI PD VT++ L+D+HCK+GM  +
Sbjct: 686  LDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSE 741



 Score =  123 bits (308), Expect = 6e-26
 Identities = 59/174 (33%), Positives = 105/174 (60%), Gaps = 4/174 (2%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLK----NNMGKWNCRPNVVSYS 169
           A+ +FD+M + G QP ++  +T++ GLC+ G  GRA +      N M   N   ++V+Y+
Sbjct: 126 AVCMFDEMIEKGYQPTSIVYSTMLKGLCKTGNTGRAQEEATRHLNEMVDNNISLDIVTYT 185

Query: 170 AIIDTLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMAD 349
            +ID LCK G + +A+ +   M               +++  C  G ++EA  +++EM  
Sbjct: 186 LLIDALCKEGTISKAVEIVDTMRKQGIEPDVVTYSI-LVDAHCKEGMVSEAEGIVDEMIK 244

Query: 350 RGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
           RGI  +V TYN+L++GHCL  E+++ARR F+ M+++G +P+ VT++ +I+ +CK
Sbjct: 245 RGIEPNVVTYNTLVNGHCLQNEMDKARRVFNLMIEKGCAPNIVTYNTMINGYCK 298



 Score =  112 bits (279), Expect = 1e-22
 Identities = 58/179 (32%), Positives = 94/179 (52%), Gaps = 4/179 (2%)
 Frame = +2

Query: 5   IKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDT 184
           +  + ++  +G+  +  + + LI+  C++G++     +   M K    P+VV +S +I+ 
Sbjct: 57  VSKYRQIELLGVSHDVYSMSILINCFCQLGRIDFGFSVLGKMLKLGVEPDVVIFSTLING 116

Query: 185 LCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLN----EARRLLEEMADR 352
           LC    + EA+ +F EM+ +           +M+ GLC +G       EA R L EM D 
Sbjct: 117 LCNQSKISEAVCMFDEMI-EKGYQPTSIVYSTMLKGLCKTGNTGRAQEEATRHLNEMVDN 175

Query: 353 GISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            IS D+ TY  LI   C  G + +A    D M  +GI PD VT+SIL+D+HCK+GM  +
Sbjct: 176 NISLDIVTYTLLIDALCKEGTISKAVEIVDTMRKQGIEPDVVTYSILVDAHCKEGMVSE 234



 Score =  110 bits (276), Expect = 3e-22
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 34/207 (16%)
 Frame = +2

Query: 11  VFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLC 190
           + D+M K GI+PN VT NTL++G C   ++ +A ++ N M +  C PN+V+Y+ +I+  C
Sbjct: 238 IVDEMIKRGIEPNVVTYNTLVNGHCLQNEMDKARRVFNLMIEKGCAPNIVTYNTMINGYC 297

Query: 191 KGGLVDEALILFSEM---------------------LGD-------------SXXXXXXX 268
           KG  +D+A+ LF E+                     LG              S       
Sbjct: 298 KGKRLDKAMELFHEISRKGPIPDTVTYNTLMQSMFQLGKISTACELFRKMLASGQVPDMA 357

Query: 269 XXXSMINGLCNSGRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEM 448
               +++GLC +G + EA +L + M +  +  D+  Y  LI G C  G +E A+  F ++
Sbjct: 358 TCLILLDGLCKTGHIEEALKLFQAMQNSELELDIVPYTILIDGFCKAGHIEVAKELFHQL 417

Query: 449 MDRGISPDTVTFSILIDSHCKDGMTED 529
            D G+ PD  ++ I+I+  CK+G+ ++
Sbjct: 418 SDNGLKPDVYSYCIMINGLCKEGLPDE 444



 Score =  104 bits (260), Expect = 2e-20
 Identities = 51/160 (31%), Positives = 91/160 (56%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
            A+ +  +M   GI+P+ +T   LI G+C +G+   A +L N M   N   ++V+Y+ +ID
Sbjct: 637  ALNLLSEMKVKGIRPDIITYTCLIHGMCNLGQQEEATRLLNEMADNNISLDIVTYTLLID 696

Query: 182  TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             LCK G + +A+ +   M              ++++  C  G ++EA   ++ M    I 
Sbjct: 697  ALCKEGTISKAVQIVDTMRKQGIEPDVVTYN-TLVDAHCKEGMVSEAEDFVDSMIKLEIE 755

Query: 362  ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVT 481
             DV TYN+L++GHCL  ++++ARR F+ M+++G +P+ VT
Sbjct: 756  PDVVTYNALVNGHCLRNKMDKARRVFNLMIEKGCAPNIVT 795



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 51/165 (30%), Positives = 91/165 (55%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++F ++++ G  P+ VT NTL+  + ++GK+  A +L   M      P++ +   ++D
Sbjct: 305 AMELFHEISRKGPIPDTVTYNTLMQSMFQLGKISTACELFRKMLASGQVPDMATCLILLD 364

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G ++EAL LF  M  +S           +I+G C +G +  A+ L  +++D G+ 
Sbjct: 365 GLCKTGHIEEALKLFQAMQ-NSELELDIVPYTILIDGFCKAGHIEVAKELFHQLSDNGLK 423

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILI 496
            DV +Y  +I+G C  G  +EA R F  M D    PD+  ++++I
Sbjct: 424 PDVYSYCIMINGLCKEGLPDEAYRLFGSMGDNDCLPDSCCYNVMI 468



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 56/174 (32%), Positives = 80/174 (45%), Gaps = 5/174 (2%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++F KM   G  P+  TC  L+ GLC+ G +  AL+L   M       ++V Y+ +ID
Sbjct: 340 ACELFRKMLASGQVPDMATCLILLDGLCKTGHIEEALKLFQAMQNSELELDIVPYTILID 399

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G ++ A  LF + L D+           MINGLC  G  +EA RL   M D    
Sbjct: 400 GFCKAGHIEVAKELFHQ-LSDNGLKPDVYSYCIMINGLCKEGLPDEAYRLFGSMGDNDCL 458

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISP-----DTVTFSILIDSHC 508
            D   YN +I G   +    +A +   EM +  +        TVT ++ I  HC
Sbjct: 459 PDSCCYNVMIRGFLCNSYTSKATQLLTEMANIQVMNLYRLLRTVTLTV-IPLHC 511



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 54/230 (23%)
 Frame = +2

Query: 2    AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRP---------- 151
            A ++F +++  G++P+  +   +I+GLC+ G    A +L  +MG  +C P          
Sbjct: 410  AKELFHQLSDNGLKPDVYSYCIMINGLCKEGLPDEAYRLFGSMGDNDCLPDSCCYNVMIR 469

Query: 152  ------------------------------------------NVVSYSAIIDTLCKGGLV 205
                                                      NV S S +I+  C+ G +
Sbjct: 470  GFLCNSYTSKATQLLTEMANIQVMNLYRLLRTVTLTVIPLHCNVYSMSILINCFCQLGRI 529

Query: 206  DEALILFSEM--LGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGISADVTTY 379
            D    +  +M  LG            ++INGLCN G+++EA  + +EM ++G   ++  Y
Sbjct: 530  DFGFSVLGKMKKLG---VEPSAVTFSTLINGLCNQGKISEAVCMFDEMTEKGYQPNLIVY 586

Query: 380  NSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            ++++ G C  G  + A R+   M  RG  P+ V ++ +ID  CK+G+ ++
Sbjct: 587  STVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVIDCLCKNGLLQE 636


>gb|KJB61822.1| hypothetical protein B456_009G383500, partial [Gossypium raimondii]
          Length = 626

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +FD+MT+ G QPN +  +T++ GLC+ G   RA++    M      PN+V+Y+ +ID
Sbjct: 170 AVCMFDEMTEKGYQPNLIVYSTVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVID 229

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL L SEM               +I+G+CN G+  EA RLL EMAD  IS
Sbjct: 230 CLCKNGLLQEALNLLSEMKVKGIRPDIITYTC-LIHGMCNLGQQEEATRLLNEMADNNIS 288

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+ TY  LI   C  G + +A +  D M  +GI PD VT++ L+D+HCK+GM  +
Sbjct: 289 LDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVDAHCKEGMVSE 344



 Score =  114 bits (284), Expect = 4e-23
 Identities = 54/170 (31%), Positives = 98/170 (57%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +  +M   GI+P+ +T   LI G+C +G+   A +L N M   N   ++V+Y+ +ID
Sbjct: 240 ALNLLSEMKVKGIRPDIITYTCLIHGMCNLGQQEEATRLLNEMADNNISLDIVTYTLLID 299

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G + +A+ +   M              ++++  C  G ++EA   ++ M    I 
Sbjct: 300 ALCKEGTISKAVQIVDTMRKQGIEPDVVTYN-TLVDAHCKEGMVSEAEDFVDSMIKLEIE 358

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            DV TYN+L++GHCL  ++++ARR F+ M++ G +P+ VT++ +I+ +CK
Sbjct: 359 PDVVTYNALVNGHCLRNKMDKARRVFNLMIENGCAPNIVTYNTMINGYCK 408



 Score =  107 bits (268), Expect = 3e-21
 Identities = 54/176 (30%), Positives = 100/176 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A +VF+ M + G  PN VT NT+I+G C+  ++ +A++L + + +    P+ V++S ++ 
Sbjct: 380 ARRVFNLMIENGCAPNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQ 439

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
           ++ + G V  A  LF +ML  S           + +GLC +G + EA +L + M + G+ 
Sbjct: 440 SMFQLGKVSTACELFRKMLA-SGQVPDIATCLILQDGLCKTGHIEEALKLFQAMRNSGLE 498

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
            D+  Y  LI G C  G +E A+  F ++ + G+ PD  T+ ++I+  CK+G+ ++
Sbjct: 499 LDIVPYTILIDGFCKAGHIEVAKELFHQLSNNGLKPDVYTYCVMINRLCKEGLPDE 554



 Score =  106 bits (264), Expect = 8e-21
 Identities = 55/167 (32%), Positives = 94/167 (56%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A ++ ++M    I  + VT   LI  LC+ G + +A+Q+ + M K    P+VV+Y+ ++D
Sbjct: 275 ATRLLNEMADNNISLDIVTYTLLIDALCKEGTISKAVQIVDTMRKQGIEPDVVTYNTLVD 334

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
             CK G+V EA      M+             +++NG C   ++++ARR+   M + G +
Sbjct: 335 AHCKEGMVSEAEDFVDSMI-KLEIEPDVVTYNALVNGHCLRNKMDKARRVFNLMIENGCA 393

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDS 502
            ++ TYN++I+G+C    L++A   F E+  +G  PDTVTFSIL+ S
Sbjct: 394 PNIVTYNTMINGYCKGKRLDKAMELFHEISRKGPIPDTVTFSILMQS 440



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F+KM      P+ V    L + + R+ +    + + + M       NV S S +I+
Sbjct: 65  ALSLFNKMIGRYPVPSIVEFTKLFAAIVRMKQHAIVVPMCSQMELLGVSHNVYSMSILIN 124

Query: 182 TLCKGGLVDEALILFSEM--LGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRG 355
             C+ G +D    +  +M  LG            ++INGLCN  +++EA  + +EM ++G
Sbjct: 125 CFCQLGRIDFGFSVLGKMKKLG---VEPSAVTFSTLINGLCNQDKISEAVCMFDEMTEKG 181

Query: 356 ISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
              ++  Y++++ G C  G  + A R+   M  RG  P+ V ++ +ID  CK+G+ ++
Sbjct: 182 YQPNLIVYSTVLKGLCKTGNTDRAVRFLRLMESRGYEPNIVAYNTVIDCLCKNGLLQE 239


>gb|KJB61807.1| hypothetical protein B456_009G384100 [Gossypium raimondii]
          Length = 416

 Score =  148 bits (373), Expect = 2e-33
 Identities = 74/176 (42%), Positives = 105/176 (59%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ + D+MT+   QPN +  +T++ GLC+ G  GRA++    M    C P++V+YS +ID
Sbjct: 29  AVCILDEMTEKRYQPNLIVYSTMLKGLCKTGNTGRAVRFLRLMESRGCEPDIVAYSTVID 88

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK GL+ EAL LFSE+               +I+G+CNSG+  EA RLL EM D  IS
Sbjct: 89  CLCKNGLLQEALDLFSEVKVKGIRPNIFTYTC-LIHGMCNSGQQEEATRLLNEMVDNNIS 147

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
             + TY  LI   C  G + +A    D M  +GI PD VT++IL+D+HCK+GM  +
Sbjct: 148 LGIVTYTLLIDALCKEGMIFKAVEIVDTMRKQGIVPDVVTYNILVDAHCKEGMVSE 203



 Score =  114 bits (286), Expect = 2e-23
 Identities = 57/170 (33%), Positives = 98/170 (57%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+ +F ++   GI+PN  T   LI G+C  G+   A +L N M   N    +V+Y+ +ID
Sbjct: 99  ALDLFSEVKVKGIRPNIFTYTCLIHGMCNSGQQEEATRLLNEMVDNNISLGIVTYTLLID 158

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGIS 361
            LCK G++ +A+ +   M               +++  C  G ++EA   ++ M  R I 
Sbjct: 159 ALCKEGMIFKAVEIVDTMRKQGIVPDVVTYNI-LVDAHCKEGMVSEAEDFVDAMIKREIE 217

Query: 362 ADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCK 511
            +V TY++L++GHCL  E+++ARR F+ M+++G +PD VT+S +I+ +CK
Sbjct: 218 PNVVTYSTLVNGHCLQNEMDKARRVFNLMIEKGCAPDIVTYSTMINGYCK 267



 Score =  114 bits (284), Expect = 4e-23
 Identities = 60/178 (33%), Positives = 98/178 (55%), Gaps = 2/178 (1%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIID 181
           A+++ D M K GI P+ VT N L+   C+ G V  A    + M K    PNVV+YS +++
Sbjct: 169 AVEIVDTMRKQGIVPDVVTYNILVDAHCKEGMVSEAEDFVDAMIKREIEPNVVTYSTLVN 228

Query: 182 TLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCN--SGRLNEARRLLEEMADRG 355
             C    +D+A  +F+ M+ +           +MING C   +G + EA +L + M + G
Sbjct: 229 GHCLQNEMDKARRVFNLMI-EKGCAPDIVTYSTMINGYCKGKTGHIEEALKLFQAMRNSG 287

Query: 356 ISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMTED 529
           +  D+  YN LI G C  G +E A+  F ++ D G+ P+ VT+ I+I+  CK+G+ ++
Sbjct: 288 LELDIVPYNILIDGLCKAGHIEFAKELFHQLSDNGLKPNVVTYHIMINGLCKEGLPDE 345



 Score =  103 bits (257), Expect = 5e-20
 Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 2/171 (1%)
 Frame = +2

Query: 17  DKMTKMGIQPNAVTCNTLISGLCRIGKVGRALQLKNNMGKWNCRPNVVSYSAIIDTLCKG 196
           D M K  I+PN VT +TL++G C   ++ +A ++ N M +  C P++V+YS +I+  CKG
Sbjct: 209 DAMIKREIEPNVVTYSTLVNGHCLQNEMDKARRVFNLMIEKGCAPDIVTYSTMINGYCKG 268

Query: 197 --GLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRGISADV 370
             G ++EAL LF  M  +S           +I+GLC +G +  A+ L  +++D G+  +V
Sbjct: 269 KTGHIEEALKLFQAMR-NSGLELDIVPYNILIDGLCKAGHIEFAKELFHQLSDNGLKPNV 327

Query: 371 TTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILIDSHCKDGMT 523
            TY+ +I+G C  G  +EA   F  M D    PD+  ++++I    ++  T
Sbjct: 328 VTYHIMINGLCKEGLPDEAYSLFGSMGDNDCLPDSCCYNVMIRGFLRNSYT 378



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
 Frame = +2

Query: 2   AIKVFDKMTKMGIQPNAVTCNTLISGLCR--IGKVGRALQLKNNMGKWNCRPNVVSYSAI 175
           A +VF+ M + G  P+ VT +T+I+G C+   G +  AL+L   M       ++V Y+ +
Sbjct: 239 ARRVFNLMIEKGCAPDIVTYSTMINGYCKGKTGHIEEALKLFQAMRNSGLELDIVPYNIL 298

Query: 176 IDTLCKGGLVDEALILFSEMLGDSXXXXXXXXXXSMINGLCNSGRLNEARRLLEEMADRG 355
           ID LCK G ++ A  LF + L D+           MINGLC  G  +EA  L   M D  
Sbjct: 299 IDGLCKAGHIEFAKELFHQ-LSDNGLKPNVVTYHIMINGLCKEGLPDEAYSLFGSMGDND 357

Query: 356 ISADVTTYNSLIHGHCLHGELEEARRYFDEMMDRGISPDTVTFSILID 499
              D   YN +I G   +    +A +   EM+ +G S D +T ++++D
Sbjct: 358 CLPDSCCYNVMIRGFLRNSYTSKATQLLTEMVGKGFSADIITATLIMD 405



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 29/84 (34%), Positives = 51/84 (60%)
 Frame = +2

Query: 278 SMINGLCNSGRLNEARRLLEEMADRGISADVTTYNSLIHGHCLHGELEEARRYFDEMMDR 457
           ++INGLCN  +++EA  +L+EM ++    ++  Y++++ G C  G    A R+   M  R
Sbjct: 15  TLINGLCNQSKISEAVCILDEMTEKRYQPNLIVYSTMLKGLCKTGNTGRAVRFLRLMESR 74

Query: 458 GISPDTVTFSILIDSHCKDGMTED 529
           G  PD V +S +ID  CK+G+ ++
Sbjct: 75  GCEPDIVAYSTVIDCLCKNGLLQE 98