BLASTX nr result

ID: Papaver30_contig00043892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00043892
         (561 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010100313.1| F-box protein [Morus notabilis] gi|587893915...    46   3e-06
ref|XP_006342788.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   5e-06
ref|XP_011043916.1| PREDICTED: F-box protein CPR30-like isoform ...    43   8e-06
ref|XP_006366000.1| PREDICTED: F-box/kelch-repeat protein At3g06...    39   8e-06

>ref|XP_010100313.1| F-box protein [Morus notabilis] gi|587893915|gb|EXB82447.1| F-box
           protein [Morus notabilis]
          Length = 391

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
 Frame = -3

Query: 508 GEIGLYLSVFGGNLCLVCD-----IVGV----RTDVWVMKDFGENKGNWTKIVTID--NC 362
           G + ++L V G +LC+ C+     IV +    R D+WVMK++G  KG+W K+ T++    
Sbjct: 249 GYVEMFLDVLGSSLCVTCNYFMEIIVDMFWSRRVDIWVMKEYGV-KGSWNKMFTVEPSEA 307

Query: 361 LKGVNYLMPLHFFKT 317
           +    YL+P  + K+
Sbjct: 308 IGIFGYLVPFAYLKS 322



 Score = 31.6 bits (70), Expect(2) = 3e-06
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -1

Query: 264 VLYDPKHTRGAAILMRGPHESFGMESYVPSLVSLKSG 154
           +LYD +  R   + +RG  E FGM S + SLV L  G
Sbjct: 335 ILYDLRRKRAKNVSIRGLPEHFGMFSCMASLVELNGG 371


>ref|XP_006342788.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum
           tuberosum]
          Length = 370

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 26/63 (41%), Positives = 39/63 (61%)
 Frame = -3

Query: 559 NVCDESVGEIDLPEGIVGEIGLYLSVFGGNLCLVCDIVGVRTDVWVMKDFGENKGNWTKI 380
           N+ DE+   + LP+ + G     L + GGNLC+ CD   V+ DVWVMK +G  + +WTK+
Sbjct: 240 NLVDETYENVGLPDLVYGNFDWELGILGGNLCVFCDYYKVQMDVWVMKAYGLVE-SWTKV 298

Query: 379 VTI 371
            +I
Sbjct: 299 ASI 301


>ref|XP_011043916.1| PREDICTED: F-box protein CPR30-like isoform X1 [Populus euphratica]
           gi|743901203|ref|XP_011043917.1| PREDICTED: F-box
           protein CPR30-like isoform X1 [Populus euphratica]
          Length = 412

 Score = 42.7 bits (99), Expect(2) = 8e-06
 Identities = 20/58 (34%), Positives = 35/58 (60%)
 Frame = -3

Query: 490 LSVFGGNLCLVCDIVGVRTDVWVMKDFGENKGNWTKIVTIDNCLKGVNYLMPLHFFKT 317
           + V  GNLC++C+   V  DVWVMK++G  K +W K+ ++    +G+ ++    F +T
Sbjct: 267 VGVLEGNLCVMCNYEHVCVDVWVMKEYGV-KESWCKMFSV----QGIKWISAFMFLRT 319



 Score = 33.5 bits (75), Expect(2) = 8e-06
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = -1

Query: 333 YIFSRREILFKLRREEVDDPNGVVL--YDPKHTRGAAILMRGPHESFGMESYVPSLVSLK 160
           ++F R  +  K   + + + NG  L  YD K+     + +RG   SFG E YV SL+ + 
Sbjct: 314 FMFLRTLVYSKDGDKVLLEVNGEKLLWYDWKNKHAKVVRVRGGPSSFGSEMYVESLIRIN 373

Query: 159 SGTFVG 142
            G  +G
Sbjct: 374 DGDRIG 379


>ref|XP_006366000.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum
           tuberosum]
          Length = 384

 Score = 39.3 bits (90), Expect(2) = 8e-06
 Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
 Frame = -3

Query: 559 NVCDESVGEIDLPEGIVGEIGLYLSV--FGGNLCLV---CDIVGVRTDVWVMKDFGENKG 395
           ++ DE  GEI LP+ +VG I   LS+  F  +L +V    +I G   +VWVMK +G  + 
Sbjct: 245 SIADEVFGEIMLPDALVGVIATNLSIMLFEESLAVVKYEREIDGASCEVWVMKQYGVLE- 303

Query: 394 NWTKIVTID 368
           +W ++  I+
Sbjct: 304 SWNRLYHIN 312



 Score = 37.0 bits (84), Expect(2) = 8e-06
 Identities = 23/61 (37%), Positives = 33/61 (54%)
 Frame = -1

Query: 315 EILFKLRREEVDDPNGVVLYDPKHTRGAAILMRGPHESFGMESYVPSLVSLKSGTFVGAG 136
           E+LF  R       N +V YDP   R   + ++G   SF +++YV SL+ LK G  V +G
Sbjct: 328 EVLFSTRN------NDLVSYDPNSGRNRGLRIQGSSRSFYVQNYVESLILLK-GNSVVSG 380

Query: 135 E 133
           E
Sbjct: 381 E 381


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