BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00041243
         (997 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   162   4e-37
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho...   161   7e-37
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc...   161   7e-37
gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz...   161   7e-37
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   160   1e-36
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   160   2e-36
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]   157   1e-35
gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subc...   157   1e-35
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   156   2e-35
gb|AAB82754.1| retrofit [Oryza longistaminata]                        153   2e-34
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   153   2e-34
emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]   153   2e-34
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  152   4e-34
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   152   4e-34
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|...   152   5e-34
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]                    152   5e-34
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]                    152   5e-34
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]                    152   5e-34
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]                    152   5e-34
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]                    152   5e-34

>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  162 bits (410), Expect = 4e-37
 Identities = 107/246 (43%), Positives = 139/246 (56%), Gaps = 9/246 (3%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKL-DLLLQSV---THLYLSTMAHMTLFICWCMWMI 546
            CKL ++LYGLKQAPR   S +    KL D+  Q     T L+      + +F+   +  I
Sbjct: 879  CKLDKALYGLKQAPRAWYSRLSK--KLYDMGFQGSKADTSLFFYNKGDLIIFVLIYVDDI 936

Query: 545  L---SLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDLL 375
            +   S Q  +P               LK L     FL ++    S G+ L+Q +Y +DLL
Sbjct: 937  IVTSSRQEAVP----ALLRDLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLL 992

Query: 374  IRAKLDGVKPIQIPLSTSGDIYSDRSTLL--SDASEYRSIVGALQYLTFTRPDLAYAVNK 201
             R  +   KP+  PLSTS  +  +    L  +DA+ YRS+VGALQYLT TRPD+A+ VNK
Sbjct: 993  RRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNK 1052

Query: 200  VCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRS 21
            VCQF+HAPT  HW  VK ILRYLK     G+ L  S S+ +S  AY D+DWAGSLDDRRS
Sbjct: 1053 VCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVS--AYSDADWAGSLDDRRS 1110

Query: 20   TSGYCV 3
            T G+ V
Sbjct: 1111 TGGFAV 1116


>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
          Length = 1150

 Score =  161 bits (408), Expect = 7e-37
 Identities = 99/247 (40%), Positives = 136/247 (55%), Gaps = 10/247 (4%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSV--------THLYLSTMAHMTLFICWC 558
            CKL ++LYGLKQAPR   S      +L + LQ +        T L+      +T+F+   
Sbjct: 695  CKLDKALYGLKQAPRAWYS------RLSMKLQQLGFSPSKADTSLFFYRKGSVTIFVLVY 748

Query: 557  MWMILSLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDL 378
            +  I                         +      FL ++    S GL LSQ +Y HD+
Sbjct: 749  VDDITVASSSQDAVSSLLHNLKMDFALKDLGDLNYYFLGIEVKKISDGLVLSQDKYTHDI 808

Query: 377  LIRAKLDGVKPIQIPLSTSGDIYSDRSTLLS--DASEYRSIVGALQYLTFTRPDLAYAVN 204
            L R  +   KP   PLSTS  +     +LL   DA+ YRSIVGALQYLT TRPD+A+++N
Sbjct: 809  LKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSIN 868

Query: 203  KVCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRR 24
            KVCQF+H+PT+ HW  VK I+RYL+ T   G+ ++ S S+ +  NA+ D+DWAG +DDRR
Sbjct: 869  KVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLV--NAFSDADWAGCVDDRR 926

Query: 23   STSGYCV 3
            STSG+ V
Sbjct: 927  STSGFAV 933


>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  161 bits (408), Expect = 7e-37
 Identities = 99/247 (40%), Positives = 136/247 (55%), Gaps = 10/247 (4%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSV--------THLYLSTMAHMTLFICWC 558
            CKL ++LYGLKQAPR   S      +L + LQ +        T L+      +T+F+   
Sbjct: 657  CKLDKALYGLKQAPRAWYS------RLSMKLQQLGFSPSKADTSLFFYRKGSVTIFVLVY 710

Query: 557  MWMILSLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDL 378
            +  I                         +      FL ++    S GL LSQ +Y HD+
Sbjct: 711  VDDITVASSSQDAVSSLLHNLKMDFALKDLGDLNYYFLGIEVKKISDGLVLSQDKYTHDI 770

Query: 377  LIRAKLDGVKPIQIPLSTSGDIYSDRSTLLS--DASEYRSIVGALQYLTFTRPDLAYAVN 204
            L R  +   KP   PLSTS  +     +LL   DA+ YRSIVGALQYLT TRPD+A+++N
Sbjct: 771  LKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSIN 830

Query: 203  KVCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRR 24
            KVCQF+H+PT+ HW  VK I+RYL+ T   G+ ++ S S+ +  NA+ D+DWAG +DDRR
Sbjct: 831  KVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLV--NAFSDADWAGCVDDRR 888

Query: 23   STSGYCV 3
            STSG+ V
Sbjct: 889  STSGFAV 895


>gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1139

 Score =  161 bits (408), Expect = 7e-37
 Identities = 99/247 (40%), Positives = 136/247 (55%), Gaps = 10/247 (4%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSV--------THLYLSTMAHMTLFICWC 558
            CKL ++LYGLKQAPR   S      +L + LQ +        T L+      +T+F+   
Sbjct: 663  CKLDKALYGLKQAPRAWYS------RLSMKLQQLGFSPSKADTSLFFYRKGSVTIFVLVY 716

Query: 557  MWMILSLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDL 378
            +  I                         +      FL ++    S GL LSQ +Y HD+
Sbjct: 717  VDDITVASSSQDAVSSLLHNLKMDFALKDLGDLNYYFLGIEVKKISDGLVLSQDKYTHDI 776

Query: 377  LIRAKLDGVKPIQIPLSTSGDIYSDRSTLLS--DASEYRSIVGALQYLTFTRPDLAYAVN 204
            L R  +   KP   PLSTS  +     +LL   DA+ YRSIVGALQYLT TRPD+A+++N
Sbjct: 777  LKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSIN 836

Query: 203  KVCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRR 24
            KVCQF+H+PT+ HW  VK I+RYL+ T   G+ ++ S S+ +  NA+ D+DWAG +DDRR
Sbjct: 837  KVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLV--NAFSDADWAGCVDDRR 894

Query: 23   STSGYCV 3
            STSG+ V
Sbjct: 895  STSGFAV 901


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  160 bits (406), Expect = 1e-36
 Identities = 103/250 (41%), Positives = 138/250 (55%), Gaps = 13/250 (5%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSV--------THLYLSTMAHMTLFICWC 558
            CKL ++LYGLKQAPR       +  KL   LQ +        T L+      + +F+   
Sbjct: 888  CKLDKALYGLKQAPRA------WYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVY 941

Query: 557  MWMIL---SLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYD 387
            +  I+   S Q  +P               LK L     FL ++    SSG+ L+Q++Y 
Sbjct: 942  VDDIIVASSRQDAVP----ALLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYV 997

Query: 386  HDLLIRAKLDGVKPIQIPLSTSGDIYSDRSTLL--SDASEYRSIVGALQYLTFTRPDLAY 213
             DLL R  +   KP+  PLSTS  +      LL  +DAS YRS+VGALQYLT TRPD+ +
Sbjct: 998  TDLLRRVGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYF 1057

Query: 212  AVNKVCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLD 33
             VNKVCQF+HAPT+ HW  +K ILRYLK     G+ +  S S+ +S   Y D+DWAG++D
Sbjct: 1058 PVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISKSKSMLVS--GYSDADWAGNID 1115

Query: 32   DRRSTSGYCV 3
            DRRST G+ V
Sbjct: 1116 DRRSTGGFAV 1125


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  160 bits (404), Expect = 2e-36
 Identities = 100/248 (40%), Positives = 140/248 (56%), Gaps = 11/248 (4%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSVTHLYLSTMAHMTLFICWCMWMILSLQ 534
            C L +SLYGLKQ PR   S      +L   LQS+   ++ + A ++LFI       + + 
Sbjct: 1065 CHLQKSLYGLKQRPRAWYS------RLSEKLQSLG--FVPSKADVSLFIYNAHSTAIYIL 1116

Query: 533  VPI---------PWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHD 381
            V +         P               +K L     FL ++      GL L Q++Y  D
Sbjct: 1117 VYVDDIIITGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQEKYARD 1176

Query: 380  LLIRAKLDGVKPIQIPLSTSGDIYSDRSTLLS--DASEYRSIVGALQYLTFTRPDLAYAV 207
            LL R  ++  KP+  P++TS  + +   TLLS  + ++YRS+VGALQYLT TRPDL+YA+
Sbjct: 1177 LLKRVGMECCKPVHTPVATSEKLSASAGTLLSPEETTKYRSVVGALQYLTLTRPDLSYAI 1236

Query: 206  NKVCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDR 27
            N+VCQF+HAPT  HW  VK ILR +++T   G+ +RPS SL LS  A+ D+DWAG  DDR
Sbjct: 1237 NRVCQFLHAPTDLHWTAVKRILRNIQHTIGLGLTIRPSLSLMLS--AFSDADWAGCPDDR 1294

Query: 26   RSTSGYCV 3
            +ST GY +
Sbjct: 1295 KSTGGYAL 1302


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score =  157 bits (398), Expect = 1e-35
 Identities = 93/241 (38%), Positives = 130/241 (53%), Gaps = 4/241 (1%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSVTHLYLSTMAHMTLFICWCMW----MI 546
            CKL ++LYGLKQAPR     +         + S +   L    H   F+   ++    +I
Sbjct: 632  CKLQKALYGLKQAPRVWFHKLREALHTWGFISSTSDTSLFIYKHNGNFLLLLVYVDDLLI 691

Query: 545  LSLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDLLIRA 366
                VP+                LK L     FL  +   T++GL L+Q +Y  DLLI+ 
Sbjct: 692  TGNNVPL---VQTLIQDLQNRFALKDLGLVKDFLGFEALRTTTGLHLTQSKYTTDLLIKT 748

Query: 365  KLDGVKPIQIPLSTSGDIYSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNKVCQFM 186
            K+   KP+  P+S +  +++      SD + YRS +GALQYLT+TRPD+A+AVNK+ Q++
Sbjct: 749  KMHSAKPVPTPMSAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLSQYL 808

Query: 185  HAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRSTSGYC 6
              PT  HW   K +LRYLK     G+   P+SSL L    Y D+DWA S+DDRRST+GYC
Sbjct: 809  QQPTELHWTACKRVLRYLKGIVHRGLHFTPASSLHL--QVYTDADWASSIDDRRSTTGYC 866

Query: 5    V 3
            V
Sbjct: 867  V 867


>gb|ABF96081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  157 bits (397), Expect = 1e-35
 Identities = 102/250 (40%), Positives = 138/250 (55%), Gaps = 13/250 (5%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSV--------THLYLSTMAHMTLFICWC 558
            CKL ++LYGLKQAPR       +  +L   LQ +        T L+      +T+F+   
Sbjct: 706  CKLDKALYGLKQAPRA------WYARLSQKLQQLGFQGSKADTSLFFYNKQGLTIFVLIY 759

Query: 557  MWMIL---SLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYD 387
            +  I+   S Q  +                LK L     FL ++    S+G+ L+Q++Y 
Sbjct: 760  VDDIIVASSRQDAV----LTLLQDLQKEFALKDLGDLHYFLGIEVNKISNGIILTQEKYA 815

Query: 386  HDLLIRAKLDGVKPIQIPLSTSGDIYSDRSTLL--SDASEYRSIVGALQYLTFTRPDLAY 213
            +DLL R  +   KP+   LSTS  +      LL  +DAS YRS+VGALQYLT TRPD+A+
Sbjct: 816  NDLLKRVGMIDCKPVSASLSTSEKLTLHEGDLLGLNDASNYRSVVGALQYLTLTRPDIAF 875

Query: 212  AVNKVCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLD 33
             VNKVCQF+HAPT  HW  VK ILRYLK     G+ +  S S+ +S   Y D+DWAG++D
Sbjct: 876  PVNKVCQFLHAPTTIHWATVKRILRYLKQCTKLGLKISKSKSMLVS--GYSDTDWAGNVD 933

Query: 32   DRRSTSGYCV 3
            DRRST G+ V
Sbjct: 934  DRRSTRGFAV 943


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  156 bits (395), Expect = 2e-35
 Identities = 106/246 (43%), Positives = 136/246 (55%), Gaps = 9/246 (3%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKL-DLLLQSV---THLYLSTMAHMTLFICWCMWMI 546
            CKL ++LYGLKQAPR   S +    KL DL  Q     T L+      + +F+   +  I
Sbjct: 1079 CKLDKALYGLKQAPRAWYSRLSK--KLYDLGFQGSKGDTSLFFYNKGGLIIFVLIYVDDI 1136

Query: 545  L---SLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDLL 375
            +   S Q  +                LK L     FL ++    +  + L+Q +Y  DLL
Sbjct: 1137 IVTSSRQEAVS----ALLQDLKKEFALKDLGDLHYFLGIEVNKVTDEIILTQDKYACDLL 1192

Query: 374  IRAKLDGVKPIQIPLSTSGDIYSDRSTLLS--DASEYRSIVGALQYLTFTRPDLAYAVNK 201
             R  +   KP+  PLSTS  + +    LL   DA+ YRS+VGALQYLT TRPD+A+ VNK
Sbjct: 1193 RRVNMFDCKPVSTPLSTSEKLSAHEGDLLGPLDATNYRSVVGALQYLTLTRPDIAFPVNK 1252

Query: 200  VCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRS 21
            VCQF+HAPT  HW  VK ILRYLK     G+ L  S S+ +S  AY D+DWAGSLDDRRS
Sbjct: 1253 VCQFLHAPTTVHWAAVKRILRYLKQCTKLGLKLCKSKSMLVS--AYSDADWAGSLDDRRS 1310

Query: 20   TSGYCV 3
            T G+ V
Sbjct: 1311 TGGFAV 1316


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  153 bits (387), Expect = 2e-34
 Identities = 98/243 (40%), Positives = 136/243 (55%), Gaps = 6/243 (2%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLL----LQSVTHLYLSTMAHMTLFICWCMWMI 546
            CKL ++LYGLKQAPR   S +    KL  L     ++ T L+      + +F+   +  I
Sbjct: 1077 CKLDKALYGLKQAPRAWYSRLSK--KLVELGFEASKADTSLFFLNKGGILMFVLVYVDDI 1134

Query: 545  LSLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDLLIRA 366
            + +                    LK L     FL ++    S+G+ L+Q++Y +DLL R 
Sbjct: 1135 I-VASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRV 1193

Query: 365  KLDGVKPIQIPLSTSGDI--YSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNKVCQ 192
             +   KP+  PLS S  +  Y       +DA +YRSIVGALQYLT TRPD+AY+VNKVCQ
Sbjct: 1194 NMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQ 1253

Query: 191  FMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRSTSG 12
            F+HAPT  HW  VK ILRYL    + G+ +  S+S  +  + Y D+DWAGS+DDR+ST G
Sbjct: 1254 FLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSASTLV--HGYSDADWAGSIDDRKSTGG 1311

Query: 11   YCV 3
            + V
Sbjct: 1312 FAV 1314


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  153 bits (387), Expect = 2e-34
 Identities = 98/242 (40%), Positives = 133/242 (54%), Gaps = 5/242 (2%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSV---THLYLSTMAHMTLFICWCMWMIL 543
            CKL ++LYGLKQAPR   S +     L L  Q+    T L+      +T+F+   +  I+
Sbjct: 945  CKLDKALYGLKQAPRAWYSRLSNKL-LSLGFQASKADTSLFFYNKGSVTIFVLVYVDDII 1003

Query: 542  SLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDLLIRAK 363
             +                    LK L     FL ++      G+ L+Q +Y  DLL +  
Sbjct: 1004 -VASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVG 1062

Query: 362  LDGVKPIQIPLSTSGDIYSDRSTLLS--DASEYRSIVGALQYLTFTRPDLAYAVNKVCQF 189
            +   KPI  PLSTS  +     + L   D ++YRSIVGALQYLT TRPD+A++VNKVCQF
Sbjct: 1063 MSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQF 1122

Query: 188  MHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRSTSGY 9
            +HAPT  HW  VK ILRY+K     G+ +  S S  +S  A+ D+DWAGS+DDR+ST G+
Sbjct: 1123 LHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVS--AFSDADWAGSVDDRKSTGGF 1180

Query: 8    CV 3
             V
Sbjct: 1181 AV 1182


>emb|CAN79393.1| hypothetical protein VITISV_010428 [Vitis vinifera]
          Length = 864

 Score =  153 bits (387), Expect = 2e-34
 Identities = 97/246 (39%), Positives = 132/246 (53%), Gaps = 10/246 (4%)
 Frame = -3

Query: 710  KLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSVTHL-YLSTMAHMTLFICWCM-WMILSL 537
            KL +SLYGLKQ+PR   +          L  S+ HL ++++    +LFIC    W++L L
Sbjct: 462  KLDKSLYGLKQSPRAWYTK---------LSTSLLHLGFVTSKNDSSLFICHSSHWLLLVL 512

Query: 536  QV--------PIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHD 381
                                        LK L     FL L+   T  G+ L+Q +Y  D
Sbjct: 513  VYVDDIIVTGSYSTQVTHLIQQLHHQFSLKNLGLLHYFLGLEVHRTPIGIHLNQAKYIID 572

Query: 380  LLIRAKLDGVKPIQIPLSTSGDIYSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNK 201
            LL +A +   KP   P+S++ ++      +L + S+YRS VGALQY T TRPD+ +AVNK
Sbjct: 573  LLTQATMLDAKPCPTPMSSNTNLSFHDGVVLENGSDYRSFVGALQYCTMTRPDIDFAVNK 632

Query: 200  VCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRS 21
            VCQFMH P+  HW  +KHIL YLK T  FG+FL+PS    ++   Y + DWA   DDR S
Sbjct: 633  VCQFMHHPSDIHWQAIKHILWYLKGTSHFGLFLQPSYDFNIT--CYTNVDWASCPDDRHS 690

Query: 20   TSGYCV 3
            TSGYC+
Sbjct: 691  TSGYCL 696


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  152 bits (384), Expect = 4e-34
 Identities = 97/243 (39%), Positives = 136/243 (55%), Gaps = 6/243 (2%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLL----LQSVTHLYLSTMAHMTLFICWCMWMI 546
            CKL ++LYGLKQAPR   S +    KL  L     ++ T L+      + +F+   +  I
Sbjct: 1068 CKLDKALYGLKQAPRAWYSRLSK--KLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDI 1125

Query: 545  LSLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDLLIRA 366
            + +                    LK L     FL ++     +G+ L+Q++Y +DLL R 
Sbjct: 1126 I-IASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRV 1184

Query: 365  KLDGVKPIQIPLSTSGDI--YSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNKVCQ 192
             +   KP+  PLS S  +  Y       +DA++YRSIVGALQYLT TRPD+AY+VNKVCQ
Sbjct: 1185 NMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQ 1244

Query: 191  FMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRSTSG 12
            F+HAPT  HW  VK ILRYL    + G+ +  S+S  +  + Y D+DWAGS+DDR+ST G
Sbjct: 1245 FLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSASTLV--HGYSDADWAGSVDDRKSTGG 1302

Query: 11   YCV 3
            + V
Sbjct: 1303 FAV 1305


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  152 bits (384), Expect = 4e-34
 Identities = 103/243 (42%), Positives = 131/243 (53%), Gaps = 6/243 (2%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLL----LQSVTHLYLSTMAHMTLFICWCMWMI 546
            CKL ++LYGLKQAPR   S +    KL  L     ++ T L+       T+FI   +  I
Sbjct: 566  CKLDKALYGLKQAPRAWYSRLS--TKLQELGFISSKADTSLFFYNKGGCTIFILVYVDDI 623

Query: 545  LSLQVPIPWXXXXXXXXXXXXXXLKILAPCLIFLELKRFCTSSGLFLSQQRYDHDLLIRA 366
            +                      LK L     FL ++    S GL LSQ  Y  D+L RA
Sbjct: 624  IVASSSAE-VVAALLKDLEKDFALKDLGDLHYFLGIEVKKVSQGLVLSQAWYASDILKRA 682

Query: 365  KLDGVKPIQIPLSTSGDIYSDRSTLL--SDASEYRSIVGALQYLTFTRPDLAYAVNKVCQ 192
             +   KP   PLST+  +  +    L  +DAS YRSIVGALQYLT TR DL++ VNKVCQ
Sbjct: 683  GMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQ 742

Query: 191  FMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRSTSG 12
            F+H+PT  HW  VK ILRY+K T  FG+    S S+ +S  A+ D+DWAG  DDRRST G
Sbjct: 743  FLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKSDSMLIS--AFSDADWAGCSDDRRSTGG 800

Query: 11   YCV 3
            + V
Sbjct: 801  FAV 803


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  152 bits (383), Expect = 5e-34
 Identities = 93/246 (37%), Positives = 134/246 (54%), Gaps = 9/246 (3%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSVTHLYLSTMAHMTLFICWCMWMILSLQ 534
            C+L +++YGLKQAPR           ++L    +T  ++++++  +LF+      I+ + 
Sbjct: 954  CRLRKAIYGLKQAPRAWY--------VELRTYLLTVGFVNSISDTSLFVLQRGRSIIYML 1005

Query: 533  VPIPWXXXXXXXXXXXXXXLKILAPCL---------IFLELKRFCTSSGLFLSQQRYDHD 381
            V +                L  L+             FL ++      GL LSQ+RY  D
Sbjct: 1006 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLD 1065

Query: 380  LLIRAKLDGVKPIQIPLSTSGDIYSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNK 201
            LL R  +   KP+  P++TS  +     T L D +EYR IVG+LQYL FTRPDL+YAVN+
Sbjct: 1066 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNR 1125

Query: 200  VCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRS 21
            + Q+MH PT  HW  +K +LRYL  TP  GIFL+  ++  LS +AY D+DWAG  DD  S
Sbjct: 1126 LSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNT--LSLHAYSDADWAGDTDDYVS 1183

Query: 20   TSGYCV 3
            T+GY V
Sbjct: 1184 TNGYIV 1189


>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  152 bits (383), Expect = 5e-34
 Identities = 93/246 (37%), Positives = 134/246 (54%), Gaps = 9/246 (3%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSVTHLYLSTMAHMTLFICWCMWMILSLQ 534
            C+L +++YGLKQAPR           ++L    +T  ++++++  +LF+      I+ + 
Sbjct: 1099 CRLRKAIYGLKQAPRAWY--------VELRTYLLTVGFVNSISDTSLFVLQRGRSIIYML 1150

Query: 533  VPIPWXXXXXXXXXXXXXXLKILAPCL---------IFLELKRFCTSSGLFLSQQRYDHD 381
            V +                L  L+             FL ++      GL LSQ+RY  D
Sbjct: 1151 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLD 1210

Query: 380  LLIRAKLDGVKPIQIPLSTSGDIYSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNK 201
            LL R  +   KP+  P++TS  +     T L D +EYR IVG+LQYL FTRPDL+YAVN+
Sbjct: 1211 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNR 1270

Query: 200  VCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRS 21
            + Q+MH PT  HW  +K +LRYL  TP  GIFL+  ++  LS +AY D+DWAG  DD  S
Sbjct: 1271 LSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNT--LSLHAYSDADWAGDTDDYVS 1328

Query: 20   TSGYCV 3
            T+GY V
Sbjct: 1329 TNGYIV 1334


>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  152 bits (383), Expect = 5e-34
 Identities = 93/246 (37%), Positives = 134/246 (54%), Gaps = 9/246 (3%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSVTHLYLSTMAHMTLFICWCMWMILSLQ 534
            C+L +++YGLKQAPR           ++L    +T  ++++++  +LF+      I+ + 
Sbjct: 1099 CRLRKAIYGLKQAPRAWY--------VELRTYLLTVGFVNSISDTSLFVLQRGRSIIYML 1150

Query: 533  VPIPWXXXXXXXXXXXXXXLKILAPCL---------IFLELKRFCTSSGLFLSQQRYDHD 381
            V +                L  L+             FL ++      GL LSQ+RY  D
Sbjct: 1151 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLD 1210

Query: 380  LLIRAKLDGVKPIQIPLSTSGDIYSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNK 201
            LL R  +   KP+  P++TS  +     T L D +EYR IVG+LQYL FTRPDL+YAVN+
Sbjct: 1211 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNR 1270

Query: 200  VCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRS 21
            + Q+MH PT  HW  +K +LRYL  TP  GIFL+  ++  LS +AY D+DWAG  DD  S
Sbjct: 1271 LSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNT--LSLHAYSDADWAGDTDDYVS 1328

Query: 20   TSGYCV 3
            T+GY V
Sbjct: 1329 TNGYIV 1334


>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  152 bits (383), Expect = 5e-34
 Identities = 93/246 (37%), Positives = 134/246 (54%), Gaps = 9/246 (3%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSVTHLYLSTMAHMTLFICWCMWMILSLQ 534
            C+L +++YGLKQAPR           ++L    +T  ++++++  +LF+      I+ + 
Sbjct: 1099 CRLRKAIYGLKQAPRAWY--------VELRTYLLTVGFVNSISDTSLFVLQRGRSIIYML 1150

Query: 533  VPIPWXXXXXXXXXXXXXXLKILAPCL---------IFLELKRFCTSSGLFLSQQRYDHD 381
            V +                L  L+             FL ++      GL LSQ+RY  D
Sbjct: 1151 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLD 1210

Query: 380  LLIRAKLDGVKPIQIPLSTSGDIYSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNK 201
            LL R  +   KP+  P++TS  +     T L D +EYR IVG+LQYL FTRPDL+YAVN+
Sbjct: 1211 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNR 1270

Query: 200  VCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRS 21
            + Q+MH PT  HW  +K +LRYL  TP  GIFL+  ++  LS +AY D+DWAG  DD  S
Sbjct: 1271 LSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNT--LSLHAYSDADWAGDTDDYVS 1328

Query: 20   TSGYCV 3
            T+GY V
Sbjct: 1329 TNGYIV 1334


>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  152 bits (383), Expect = 5e-34
 Identities = 93/246 (37%), Positives = 134/246 (54%), Gaps = 9/246 (3%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSVTHLYLSTMAHMTLFICWCMWMILSLQ 534
            C+L +++YGLKQAPR           ++L    +T  ++++++  +LF+      I+ + 
Sbjct: 1099 CRLRKAIYGLKQAPRAWY--------VELRTYLLTVGFVNSISDTSLFVLQRGRSIIYML 1150

Query: 533  VPIPWXXXXXXXXXXXXXXLKILAPCL---------IFLELKRFCTSSGLFLSQQRYDHD 381
            V +                L  L+             FL ++      GL LSQ+RY  D
Sbjct: 1151 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLD 1210

Query: 380  LLIRAKLDGVKPIQIPLSTSGDIYSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNK 201
            LL R  +   KP+  P++TS  +     T L D +EYR IVG+LQYL FTRPDL+YAVN+
Sbjct: 1211 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNR 1270

Query: 200  VCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRS 21
            + Q+MH PT  HW  +K +LRYL  TP  GIFL+  ++  LS +AY D+DWAG  DD  S
Sbjct: 1271 LSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNT--LSLHAYSDADWAGDTDDYVS 1328

Query: 20   TSGYCV 3
            T+GY V
Sbjct: 1329 TNGYIV 1334


>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  152 bits (383), Expect = 5e-34
 Identities = 93/246 (37%), Positives = 134/246 (54%), Gaps = 9/246 (3%)
 Frame = -3

Query: 713  CKLHRSLYGLKQAPRGTTSSVPFCCKLDLLLQSVTHLYLSTMAHMTLFICWCMWMILSLQ 534
            C+L +++YGLKQAPR           ++L    +T  ++++++  +LF+      I+ + 
Sbjct: 1099 CRLRKAIYGLKQAPRAWY--------VELRTYLLTVGFVNSISDTSLFVLQRGRSIIYML 1150

Query: 533  VPIPWXXXXXXXXXXXXXXLKILAPCL---------IFLELKRFCTSSGLFLSQQRYDHD 381
            V +                L  L+             FL ++      GL LSQ+RY  D
Sbjct: 1151 VYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLD 1210

Query: 380  LLIRAKLDGVKPIQIPLSTSGDIYSDRSTLLSDASEYRSIVGALQYLTFTRPDLAYAVNK 201
            LL R  +   KP+  P++TS  +     T L D +EYR IVG+LQYL FTRPDL+YAVN+
Sbjct: 1211 LLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNR 1270

Query: 200  VCQFMHAPTVFHWGLVKHILRYLKNTPTFGIFLRPSSSLQLSFNAYVDSDWAGSLDDRRS 21
            + Q+MH PT  HW  +K +LRYL  TP  GIFL+  ++  LS +AY D+DWAG  DD  S
Sbjct: 1271 LSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNT--LSLHAYSDADWAGDTDDYVS 1328

Query: 20   TSGYCV 3
            T+GY V
Sbjct: 1329 TNGYIV 1334