BLASTX nr result
ID: Papaver30_contig00039296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00039296
(762 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 144 2e-57
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 138 2e-56
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 141 2e-56
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 135 4e-55
emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera] 126 1e-53
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera] 126 6e-53
emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera] 128 7e-52
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera] 118 3e-51
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 115 1e-50
gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sat... 115 1e-50
gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subc... 115 1e-50
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera] 117 2e-50
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ... 115 2e-50
emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group] 113 8e-50
gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japoni... 112 8e-50
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera] 117 1e-49
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc... 112 1e-49
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc... 112 1e-49
gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subc... 112 1e-49
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc... 112 2e-49
>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
Length = 1316
Score = 144 bits (364), Expect(2) = 2e-57
Identities = 74/156 (47%), Positives = 102/156 (65%), Gaps = 7/156 (4%)
Frame = +3
Query: 36 DVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAM-- 209
DVLH P++ KNLVSG LL+K G SD + +TKN+ FVGKGY +DG+FK+NV +
Sbjct: 522 DVLHVPDICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGLFKMNVMTVVP 581
Query: 210 -----NKIDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAK 374
NKIDSSAY++ + N+WHGRL HV + + L LP+F+ + KCE C ++K
Sbjct: 582 KSINNNKIDSSAYLLKSSNIWHGRLGHVNYDTLCRLIHLDYLPKFNIDPNHKCETCVESK 641
Query: 375 ITKSSHKSVVRESEPLELVHSDLCEYEGILTRNEKK 482
+TK SV R +EPL+L HSD+C+ + + TR KK
Sbjct: 642 LTKVPFHSVERSTEPLDLFHSDICDLKFVQTRGGKK 677
Score = 106 bits (264), Expect(2) = 2e-57
Identities = 54/92 (58%), Positives = 65/92 (70%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K+Y +TFIDD + Y YVYLL K+EAI+ FK + EVENQ +KIK RSDR EY+S P
Sbjct: 676 KKYFITFIDDCTRYCYVYLLKSKDEAIEMFKHYKIEVENQLSKKIKAIRSDRGGEYES-P 734
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRT 753
F E GIIH+ APY+P+ NG AERKNRT
Sbjct: 735 FEEFCLEHGIIHQTIAPYSPQSNGMAERKNRT 766
>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
Length = 1316
Score = 138 bits (347), Expect(2) = 2e-56
Identities = 70/154 (45%), Positives = 98/154 (63%), Gaps = 5/154 (3%)
Frame = +3
Query: 36 DVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNV----- 200
+VL+ PE+RKNLVSG LLN G S+ ++K+ +VGKGY +DGM+KLNV
Sbjct: 395 NVLYVPEIRKNLVSGSLLNNHGFRLVFXSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIK 454
Query: 201 DAMNKIDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKIT 380
MNK +S YM+ + N+WHGRL HV + + L +P F N KCE C +AK+T
Sbjct: 455 SNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLT 514
Query: 381 KSSHKSVVRESEPLELVHSDLCEYEGILTRNEKK 482
+SS +SV R +EPL+L+HSD+C+ + + TR K
Sbjct: 515 RSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNK 548
Score = 109 bits (272), Expect(2) = 2e-56
Identities = 54/91 (59%), Positives = 67/91 (73%)
Frame = +1
Query: 481 RYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKPF 660
+Y +TF+DD + Y YVYLL K+EAI+KF ++ EVENQ +KIK RSDR EY+S PF
Sbjct: 548 KYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYES-PF 606
Query: 661 TEIYESSGIIHEKTAPYNPEMNGKAERKNRT 753
+I GIIHE TAPY+P+ NG AERKNRT
Sbjct: 607 VDICAQHGIIHETTAPYSPQSNGVAERKNRT 637
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 141 bits (356), Expect(2) = 2e-56
Identities = 70/154 (45%), Positives = 100/154 (64%), Gaps = 5/154 (3%)
Frame = +3
Query: 36 DVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAM-- 209
+VL+ PE+RKNLVSG LLNK G SD+ ++KN +VGKGY DG+FKLNV +
Sbjct: 384 NVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDGLFKLNVMTLKP 443
Query: 210 ---NKIDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKIT 380
NK SSAY++ + N+WHGRL HV + + + +P F + KC+ C +AK+T
Sbjct: 444 TINNKATSSAYLLESSNIWHGRLGHVNFNSLRKLINMKHIPNFQIDLKHKCKTCVEAKLT 503
Query: 381 KSSHKSVVRESEPLELVHSDLCEYEGILTRNEKK 482
+SS + + R SEPL+L+HSD+C+++ I TR K
Sbjct: 504 RSSFQIIQRNSEPLDLIHSDICDFKSIQTRGGNK 537
Score = 105 bits (263), Expect(2) = 2e-56
Identities = 54/91 (59%), Positives = 65/91 (71%)
Frame = +1
Query: 481 RYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKPF 660
+Y +TFIDD + Y YVYLL K+EA+ KF ++ EVENQ RKIK RSDR EY PF
Sbjct: 537 KYFITFIDDCTKYCYVYLLKSKDEALDKFILYKNEVENQLNRKIKELRSDRGGEY-VVPF 595
Query: 661 TEIYESSGIIHEKTAPYNPEMNGKAERKNRT 753
+ E SGIIH+ TAPY+P+ NG AERKNRT
Sbjct: 596 MSLCEQSGIIHQVTAPYSPQSNGIAERKNRT 626
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 135 bits (340), Expect(2) = 4e-55
Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 5/154 (3%)
Frame = +3
Query: 36 DVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNV----- 200
+VL+ PE+RKNLV G LLN G S+ ++K+ +VGKGY +DGM+KLNV
Sbjct: 395 NVLYVPEIRKNLVFGSLLNNHGFRLVFESNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIK 454
Query: 201 DAMNKIDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKIT 380
MNK +S YM+ + N+WHGRL HV + + L +P F N KCE C +AK+T
Sbjct: 455 SNMNKASTSTYMLESSNLWHGRLRHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLT 514
Query: 381 KSSHKSVVRESEPLELVHSDLCEYEGILTRNEKK 482
+SS +SV R +EPL+L+HSD+C+ + + TR K
Sbjct: 515 RSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNK 548
Score = 107 bits (268), Expect(2) = 4e-55
Identities = 53/91 (58%), Positives = 66/91 (72%)
Frame = +1
Query: 481 RYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKPF 660
+Y +TF+DD + Y YVYLL K+EAI+KF ++ EVENQ +KIK RSDR EY+S PF
Sbjct: 548 KYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYES-PF 606
Query: 661 TEIYESSGIIHEKTAPYNPEMNGKAERKNRT 753
+I GIIHE T PY+P+ NG AERKNRT
Sbjct: 607 VDICAQHGIIHETTTPYSPQSNGVAERKNRT 637
>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
Length = 1114
Score = 126 bits (317), Expect(2) = 1e-53
Identities = 67/150 (44%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNV-DAM 209
++VL+ P+M KNLVS LL K G+ S +TK++NFVGKGY+ DGM KL+ D +
Sbjct: 255 KNVLYVPDMNKNLVSRDLLGKPGIKAVFESGKLILTKSRNFVGKGYSCDGMIKLSTNDNI 314
Query: 210 NKIDSSAYMVCNFN---VWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKIT 380
NK+ S++ +C+ N +WH RL HVG + + K G++ FEKCE C ++K+
Sbjct: 315 NKMTSTSAYMCDSNSLILWHNRLAHVGLSTIKRIVKCGLI-ACDTKKFEKCEICVKSKMI 373
Query: 381 KSSHKSVVRESEPLELVHSDLCEYEGILTR 470
K SV R S L+L+HSDLCE G+LTR
Sbjct: 374 KKPFHSVERSSNLLDLIHSDLCELNGMLTR 403
Score = 111 bits (278), Expect(2) = 1e-53
Identities = 56/92 (60%), Positives = 64/92 (69%)
Frame = +1
Query: 481 RYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKPF 660
RY +TFIDD S +TYV+LL +K+E FKV+ AEVENQ G+ IK RSDR EY S F
Sbjct: 407 RYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLGKNIKVLRSDRGGEYFSSEF 466
Query: 661 TEIYESSGIIHEKTAPYNPEMNGKAERKNRTF 756
E GIIHE TAPY P+ NG AERKNRTF
Sbjct: 467 NSFCEEYGIIHECTAPYTPQHNGIAERKNRTF 498
>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
Length = 1473
Score = 126 bits (317), Expect(2) = 6e-53
Identities = 68/150 (45%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNV-DAM 209
++VL+ P+M KNLVSG LL K G+ S +TK+ NFVGKGY+ DGM KL+ D +
Sbjct: 365 KNVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILTKSGNFVGKGYSCDGMIKLSTNDNI 424
Query: 210 NKIDSSAYMVCNFN---VWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKIT 380
NK+ S++ +C+ N +WH RL HVG + + K G++ FEKCE C ++K+
Sbjct: 425 NKMTSTSAYMCDSNSLXLWHNRLAHVGLSTIKRIVKCGLI-ACDTKKFEKCEICVKSKMI 483
Query: 381 KSSHKSVVRESEPLELVHSDLCEYEGILTR 470
K SV R S L+L HSDLCE G+LTR
Sbjct: 484 KKPFHSVERSSNLLDLXHSDLCELNGMLTR 513
Score = 109 bits (272), Expect(2) = 6e-53
Identities = 55/92 (59%), Positives = 63/92 (68%)
Frame = +1
Query: 481 RYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKPF 660
RY +TFIDD S +TYV+LL +K+E FKV+ AEVENQ + IK RSDR EY S F
Sbjct: 517 RYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLXKNIKVLRSDRGXEYFSSEF 576
Query: 661 TEIYESSGIIHEKTAPYNPEMNGKAERKNRTF 756
E GIIHE TAPY P+ NG AERKNRTF
Sbjct: 577 NSFCEEYGIIHECTAPYTPQHNGIAERKNRTF 608
>emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]
Length = 565
Score = 128 bits (322), Expect(2) = 7e-52
Identities = 70/152 (46%), Positives = 95/152 (62%), Gaps = 3/152 (1%)
Frame = +3
Query: 36 DVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAM-- 209
DVLH P++R NLVS LL KAG+ SD +TKN FVGKGY G+F+LNV +
Sbjct: 252 DVLHVPDIRWNLVSVSLLGKAGVKILFESDKIVLTKNDAFVGKGYCNQGLFRLNVFYIII 311
Query: 210 -NKIDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITKS 386
N SSAY+V + + WHGRL HV + M +L ++P+ S + KCE C ++K TK
Sbjct: 312 NNTSSSSAYIVDSCDTWHGRLGHVNFSYMKKMVELSLIPKLSLENHGKCESCVESKTTKK 371
Query: 387 SHKSVVRESEPLELVHSDLCEYEGILTRNEKK 482
S KSV RE + L L+HSDL + + +TR+ K+
Sbjct: 372 SCKSVERELDLLSLIHSDLGDLKNTMTRDGKR 403
Score = 103 bits (258), Expect(2) = 7e-52
Identities = 53/92 (57%), Positives = 63/92 (68%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
KR+ +TFIDDYS YT VYLL +K+EA F + EVENQ +KI+R R+DR EY+S
Sbjct: 402 KRFYITFIDDYSRYTRVYLLRNKDEARDAFIKYKNEVENQLNKKIERLRTDRGGEYESNL 461
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRT 753
F E IIHE T PY+PE NG AERKNRT
Sbjct: 462 FNSFCEDHRIIHETTPPYSPESNGIAERKNRT 493
>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 118 bits (296), Expect(2) = 3e-51
Identities = 66/150 (44%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
Frame = +3
Query: 36 DVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKL--NVDAM 209
+VL+ P+M KNLVSG L K G+ S ++K+ NFVGKGY+ DGM KL N + +
Sbjct: 318 NVLYVPDMNKNLVSGDFLGKPGIKAVFESGKLILSKSGNFVGKGYSCDGMIKLCTNDNII 377
Query: 210 NKIDSSAYMVCNFN---VWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKIT 380
+SAYM C+ N +WH RL HVG + + K G++ FEKCE C ++K+
Sbjct: 378 KMASTSAYM-CDSNSLFLWHNRLAHVGLSTIKRIVKCGLI-ACDTKKFEKCEICVKSKMI 435
Query: 381 KSSHKSVVRESEPLELVHSDLCEYEGILTR 470
K SV R S L+L+HSDLCE G+LT+
Sbjct: 436 KMPFHSVERSSNLLDLIHSDLCELNGMLTK 465
Score = 111 bits (278), Expect(2) = 3e-51
Identities = 56/92 (60%), Positives = 64/92 (69%)
Frame = +1
Query: 481 RYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKPF 660
RY +TFIDD S +TYV+LL +K+E FKV+ AEVENQ G+ IK RSDR EY S F
Sbjct: 469 RYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLGKNIKVLRSDRGGEYFSSEF 528
Query: 661 TEIYESSGIIHEKTAPYNPEMNGKAERKNRTF 756
E GIIHE TAPY P+ NG AERKNRTF
Sbjct: 529 NSFCEEYGIIHECTAPYTPQHNGIAERKNRTF 560
>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
Length = 1038
Score = 115 bits (287), Expect(2) = 1e-50
Identities = 61/150 (40%), Positives = 91/150 (60%), Gaps = 2/150 (1%)
Frame = +3
Query: 36 DVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAMN- 212
+VL+ P +R+NLVSG LLN+AGL + D +TKN NFVGKGY ++G+F LN +MN
Sbjct: 394 NVLYVPSLRRNLVSGSLLNRAGLKIVLEGDKVVLTKNGNFVGKGYLSNGLFVLNTISMNA 453
Query: 213 KIDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITKSSH 392
SSAY++ + N+WHGRL HV + + + ++ ++ KC C ++K K
Sbjct: 454 NASSSAYLIESANLWHGRLGHVNFASIRKLKDMRLINTSETHETGKCPVCIESKFHKKPF 513
Query: 393 KSV-VRESEPLELVHSDLCEYEGILTRNEK 479
K V R +E LEL++SDL ++ +R K
Sbjct: 514 KPVEYRTTELLELIYSDLADFRTTASRGGK 543
Score = 113 bits (282), Expect(2) = 1e-50
Identities = 54/92 (58%), Positives = 66/92 (71%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K Y ++F+DDYS +T +YL+ KNEA+ F F AE ENQ G++IKR RSDR EY K
Sbjct: 543 KNYYVSFVDDYSRFTKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDRGGEYSDKT 602
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRT 753
E ES+GIIHE TAPY+P+ NG AERKNRT
Sbjct: 603 LKEFCESNGIIHEFTAPYSPQQNGIAERKNRT 634
>gb|AAK13130.1|AC083945_5 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1363
Score = 115 bits (288), Expect(2) = 1e-50
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K+Y MT IDD + + YVYLL K+EA+ FK++ AEVENQ RKIKR RSDR EY S
Sbjct: 659 KKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 718
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRTFT 759
FT E GIIHE+T PY+P+ NG AERKNRT T
Sbjct: 719 FTSFCEEYGIIHERTPPYSPQSNGVAERKNRTLT 752
Score = 112 bits (281), Expect(2) = 1e-50
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAM- 209
++V H P ++KNLVSG LL K G S+ ++K F+GKGY + G+F+ ++D M
Sbjct: 508 KNVQHVPSIKKNLVSGSLLYKDGFRLVFESNKCGVSKYGTFIGKGYDSGGLFRFSLDDMC 567
Query: 210 NK-IDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITKS 386
NK ++ + NVWH RLCHV + +++ + ++P+F+ KC C Q+K +
Sbjct: 568 NKVVNHVSDDDDESNVWHSRLCHVNFGCMTSLANMSLIPKFTLVKGSKCHTCVQSKQPRK 627
Query: 387 SHKSV-VRESEPLELVHSDLCEYEGILTRNEKK 482
HK+ R PLELVHSDLCE G+LT+ KK
Sbjct: 628 PHKAFEARNLAPLELVHSDLCEMNGVLTKGGKK 660
>gb|ABB47331.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1022
Score = 115 bits (288), Expect(2) = 1e-50
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K+Y MT IDD + + YVYLL K+EA+ FK++ AEVENQ RKIKR RSDR EY S
Sbjct: 539 KKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 598
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRTFT 759
FT E GIIHE+T PY+P+ NG AERKNRT T
Sbjct: 599 FTSFCEEYGIIHERTPPYSPQSNGVAERKNRTLT 632
Score = 112 bits (281), Expect(2) = 1e-50
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAM- 209
++V H P ++KNLVSG LL K G S+ ++K F+GKGY + G+F+ ++D M
Sbjct: 388 KNVQHVPSIKKNLVSGSLLYKDGFRLVFESNKCGVSKYGTFIGKGYDSGGLFRFSLDDMC 447
Query: 210 NK-IDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITKS 386
NK ++ + NVWH RLCHV + +++ + ++P+F+ KC C Q+K +
Sbjct: 448 NKVVNHVSDDDDESNVWHSRLCHVNFGCMTSLANMSLIPKFTLVKGSKCHTCVQSKQPRK 507
Query: 387 SHKSV-VRESEPLELVHSDLCEYEGILTRNEKK 482
HK+ R PLELVHSDLCE G+LT+ KK
Sbjct: 508 PHKAFEARNLAPLELVHSDLCEMNGVLTKGGKK 540
>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
Length = 791
Score = 117 bits (294), Expect(2) = 2e-50
Identities = 66/150 (44%), Positives = 89/150 (59%), Gaps = 5/150 (3%)
Frame = +3
Query: 36 DVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKL--NVDAM 209
+VL+ P+M KNLVSG LL K S ++K+ NFVG GY+ DGM KL N + +
Sbjct: 344 NVLYVPDMNKNLVSGDLLGKPSFKAVFESGKLILSKSGNFVGNGYSCDGMIKLCTNDNII 403
Query: 210 NKIDSSAYMVCNFN---VWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKIT 380
+SAYM C+ N +WH RL HVG ++ + K G++ FEKCE C ++K+
Sbjct: 404 KMASTSAYM-CDSNSLILWHNRLAHVGLSIIKRIVKCGLIA-CDTKKFEKCEICVKSKMI 461
Query: 381 KSSHKSVVRESEPLELVHSDLCEYEGILTR 470
K SV R S L+L+HSDLCE G+LTR
Sbjct: 462 KKPFHSVERSSNLLDLIHSDLCELNGMLTR 491
Score = 110 bits (274), Expect(2) = 2e-50
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +1
Query: 481 RYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKPF 660
RY +TFIDD S +TYV+LL +K+E FKV+ A+VENQ G+ IK RSDR EY S F
Sbjct: 495 RYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYNAKVENQLGKNIKVLRSDRGGEYFSSEF 554
Query: 661 TEIYESSGIIHEKTAPYNPEMNGKAERKNRTF 756
E GIIHE TAPY P+ NG AERKNRTF
Sbjct: 555 NSFCEEYGIIHECTAPYTPQHNGIAERKNRTF 586
>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 115 bits (288), Expect(2) = 2e-50
Identities = 57/94 (60%), Positives = 67/94 (71%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K+Y MT IDD + + YVYLL K+EA+ FK++ AEVENQ RKIKR RSDR EY S
Sbjct: 474 KKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 533
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRTFT 759
FT E GIIHE+T PY+P+ NG AERKNRT T
Sbjct: 534 FTSFCEEYGIIHERTPPYSPQSNGVAERKNRTLT 567
Score = 112 bits (280), Expect(2) = 2e-50
Identities = 61/153 (39%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAM- 209
++V H P ++KNLVSG LL + G S+ ++K F+GKGY + G+F+ ++D M
Sbjct: 323 KNVQHVPSIKKNLVSGSLLCRDGFRLVFESNKCVVSKYGTFIGKGYDSGGLFRFSLDDMC 382
Query: 210 NK-IDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITKS 386
NK ++ + NVWH RLCHV + ++ + ++P+F+ KC C Q+K +
Sbjct: 383 NKVVNHVSDDDDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPRK 442
Query: 387 SHK-SVVRESEPLELVHSDLCEYEGILTRNEKK 482
HK S R PLELVHSDLCE G+LT+ KK
Sbjct: 443 PHKASEARNLAPLELVHSDLCEMNGVLTKGGKK 475
>emb|CAE05248.2| OSJNBb0115I09.10 [Oryza sativa Japonica Group]
Length = 1321
Score = 113 bits (283), Expect(2) = 8e-50
Identities = 60/154 (38%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAMN 212
++V H P ++KNLVSG LL + G S+ ++K FVGKGY + G+F+ +++ M
Sbjct: 375 KNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMC 434
Query: 213 KIDSSAYMVC---NFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITK 383
++ + NVWH RLCHV + ++ + ++P+F+ KC C Q+K +
Sbjct: 435 NNHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPR 494
Query: 384 SSHK-SVVRESEPLELVHSDLCEYEGILTRNEKK 482
HK S VR PLELVHSDLCE G+LT+ KK
Sbjct: 495 KPHKASEVRNLAPLELVHSDLCEMNGVLTKGGKK 528
Score = 112 bits (279), Expect(2) = 8e-50
Identities = 56/94 (59%), Positives = 65/94 (69%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K+Y MT IDD + + YVYLL K+EA+ FK++ AEVENQ RKIKR RSDR EY S
Sbjct: 527 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 586
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRTFT 759
F E GIIHE T PY+P+ NG AERKNRT T
Sbjct: 587 FASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLT 620
>gb|AAS07263.1| putative gag/pol polyprotein [Oryza sativa Japonica Group]
gi|108710643|gb|ABF98438.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1318
Score = 112 bits (281), Expect(2) = 8e-50
Identities = 59/154 (38%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAM- 209
++V H P ++KNLVSG LL + G S+ ++K + FVGKGY + G+F+ +++ M
Sbjct: 473 KNVQHVPSIKKNLVSGSLLCREGFRLVFKSNKCVVSKYETFVGKGYDSGGLFRFSLNDMC 532
Query: 210 --NKIDSSAYMVCNFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITK 383
+ + + NVWH RLCHV + ++ + ++P+F+ KC C Q+K +
Sbjct: 533 NNHNVVNHISENDESNVWHSRLCHVNFSCMTRLANMSLIPKFTLVKGSKCHTCVQSKQHR 592
Query: 384 SSHK-SVVRESEPLELVHSDLCEYEGILTRNEKK 482
HK S R PLELVHSDLCE +LT+ EKK
Sbjct: 593 KPHKASEARNLAPLELVHSDLCEMNSVLTKGEKK 626
Score = 112 bits (281), Expect(2) = 8e-50
Identities = 55/95 (57%), Positives = 67/95 (70%)
Frame = +1
Query: 475 KKRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSK 654
+K+Y MT IDD + + YVYLL K+EA+ FK++ AEV+NQ RKIKR RSDR EY S
Sbjct: 624 EKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVDNQLERKIKRLRSDRGGEYFSN 683
Query: 655 PFTEIYESSGIIHEKTAPYNPEMNGKAERKNRTFT 759
F E GIIHE+T PY+P+ NG AERKNRT T
Sbjct: 684 EFASFCEEFGIIHERTPPYSPQSNGVAERKNRTLT 718
>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 117 bits (293), Expect(2) = 1e-49
Identities = 67/150 (44%), Positives = 89/150 (59%), Gaps = 5/150 (3%)
Frame = +3
Query: 36 DVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKL--NVDAM 209
+VL+ P+M KNLVSG LL K G+ S ++K+ NFVGKGY+ DGM KL N + +
Sbjct: 159 NVLYVPDMNKNLVSGDLLGKPGIKAVFESGKLILSKSGNFVGKGYSCDGMIKLCTNDNII 218
Query: 210 NKIDSSAYMVCNFN---VWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKIT 380
+SAYM C+ N +WH RL HVG + + K G++ FEKCE C ++K+
Sbjct: 219 KMASTSAYM-CDSNSLFLWHNRLAHVGLSTIKRIVKCGLI-ACDTKKFEKCEICVKSKMI 276
Query: 381 KSSHKSVVRESEPLELVHSDLCEYEGILTR 470
K SV R S L+L HSDLCE +LTR
Sbjct: 277 KKXFHSVERSSNLLDLXHSDLCELNXMLTR 306
Score = 107 bits (268), Expect(2) = 1e-49
Identities = 53/91 (58%), Positives = 62/91 (68%)
Frame = +1
Query: 484 YVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKPFT 663
Y +TFID+ S +TYV+LL +K+E FKV+ EVENQ G+ IK RSDR EY S F
Sbjct: 311 YFJTFIDBXSRFTYVFLLKNKSETFNAFKVYKTEVENQLGKNIKVLRSDRGGEYFSSEFN 370
Query: 664 EIYESSGIIHEKTAPYNPEMNGKAERKNRTF 756
E GIIHE TAPY P+ NG AERKNRTF
Sbjct: 371 SFCEEYGIIHECTAPYTPQHNGIAERKNRTF 401
>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1452
Score = 112 bits (280), Expect(2) = 1e-49
Identities = 59/154 (38%), Positives = 89/154 (57%), Gaps = 4/154 (2%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAMN 212
++V H P ++KNLVSG LL + G S+ ++K + FVGKGY + G+F+ +++ M
Sbjct: 510 KNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYETFVGKGYDSGGLFRFSLNDMC 569
Query: 213 KIDSSAYMVC---NFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITK 383
++ + NVWH RLCHV + ++ + ++P+F+ KC C Q+K +
Sbjct: 570 NNHNAVNHISENDESNVWHSRLCHVNFGCMMRLANMSLIPKFTLVKGSKCHTCVQSKQPR 629
Query: 384 SSHK-SVVRESEPLELVHSDLCEYEGILTRNEKK 482
HK S R PLELVHSDLCE G+LT+ KK
Sbjct: 630 KPHKASEARNLAPLELVHSDLCEMNGVLTKGGKK 663
Score = 112 bits (280), Expect(2) = 1e-49
Identities = 56/94 (59%), Positives = 65/94 (69%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K+Y MT IDD + + YVYLL K+EA+ FK++ AEVENQ RKIKR RSDR EY S
Sbjct: 662 KKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 721
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRTFT 759
F E GIIHE T PY+P+ NG AERKNRT T
Sbjct: 722 FASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLT 755
>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 112 bits (281), Expect(2) = 1e-49
Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAMN 212
++V H P ++KNLVSG LL + G S+ ++K FVGKGY + G+F+ +++ M
Sbjct: 467 KNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMC 526
Query: 213 KIDSSAYMVCNF---NVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITK 383
++ + NVWH RLCHV + ++ + ++P+F+ KC C Q+K +
Sbjct: 527 NNHNAVNHISEIDESNVWHSRLCHVNFGCLTRLANMSLIPKFTLVKGSKCHTCVQSKQPR 586
Query: 384 SSHK-SVVRESEPLELVHSDLCEYEGILTRNEKK 482
HK S R PLELVHSDLCE G+LT+ KK
Sbjct: 587 KPHKASEARNLAPLELVHSDLCEMNGVLTKGGKK 620
Score = 112 bits (279), Expect(2) = 1e-49
Identities = 56/94 (59%), Positives = 65/94 (69%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K+Y MT IDD + + YVYLL K+EA+ FK++ AEVENQ RKIKR RSDR EY S
Sbjct: 619 KKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 678
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRTFT 759
F E GIIHE T PY+P+ NG AERKNRT T
Sbjct: 679 FASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLT 712
>gb|ABA91121.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1186
Score = 112 bits (280), Expect(2) = 1e-49
Identities = 61/154 (39%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNV-DAM 209
++V H P ++KNLVSG LL + G S+ ++K FVGKGY + G+F+ ++ D
Sbjct: 498 KNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMC 557
Query: 210 NKIDSSAYMVCN--FNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITK 383
N ++ ++ N NVWH RLCHV + ++ + ++P+F+ KC C Q+K +
Sbjct: 558 NNHNAVNHISKNDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPR 617
Query: 384 SSHK-SVVRESEPLELVHSDLCEYEGILTRNEKK 482
HK S R PLELVHSDLCE G+LT+ KK
Sbjct: 618 KPHKASEARNLAPLELVHSDLCEMNGVLTKGGKK 651
Score = 112 bits (280), Expect(2) = 1e-49
Identities = 56/94 (59%), Positives = 65/94 (69%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K+Y MT IDD + + YVYLL K+EA+ FK++ AEVENQ RKIKR RSDR EY S
Sbjct: 650 KKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 709
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRTFT 759
F E GIIHE T PY+P+ NG AERKNRT T
Sbjct: 710 FASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLT 743
>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 112 bits (280), Expect(2) = 2e-49
Identities = 56/94 (59%), Positives = 65/94 (69%)
Frame = +1
Query: 478 KRYVMTFIDDYSNYTYVYLLSHKNEAIQKFKVFIAEVENQFGRKIKRFRSDR*TEYDSKP 657
K+Y MT IDD + + YVYLL K+EA+ FK++ AEVENQ RKIKR RSDR EY S
Sbjct: 654 KKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEYFSNE 713
Query: 658 FTEIYESSGIIHEKTAPYNPEMNGKAERKNRTFT 759
F E GIIHE T PY+P+ NG AERKNRT T
Sbjct: 714 FASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLT 747
Score = 112 bits (279), Expect(2) = 2e-49
Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Frame = +3
Query: 33 RDVLHTPEMRKNLVSGYLLNKAGLYQTIGSDVYTITKNKNFVGKGYATDGMFKLNVDAMN 212
++V H P ++KNLVSG LL + G S+ ++K FVGKGY + G+F+ +++ M
Sbjct: 502 KNVQHVPSIKKNLVSGSLLCREGFRLVFESNKCVVSKYGTFVGKGYDSGGLFRFSLNDMC 561
Query: 213 KIDSSAYMVC---NFNVWHGRLCHVGKKLVNNMSKLGVLPEFSENDFEKCEYCSQAKITK 383
++ + NVWH RLCHV + ++ + ++P+F+ KC C Q+K +
Sbjct: 562 NNHNAVNHISENDESNVWHSRLCHVNFGCMTRLANMSLIPKFTLVKGSKCHTCVQSKQPR 621
Query: 384 SSHK-SVVRESEPLELVHSDLCEYEGILTRNEKK 482
HK S R PLELVHSDLCE G+LT+ KK
Sbjct: 622 KPHKASEARNLAPLELVHSDLCEMNGVLTKGGKK 655