BLASTX nr result
ID: Papaver30_contig00037056
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00037056
(944 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KOM57044.1| hypothetical protein LR48_Vigan11g007600 [Vigna a... 54 7e-10
ref|XP_008242261.1| PREDICTED: U6 snRNA-associated Sm-like prote... 49 4e-08
ref|XP_009390858.1| PREDICTED: probable U6 snRNA-associated Sm-l... 50 6e-08
ref|XP_012856715.1| PREDICTED: sm-like protein LSM1B [Erythranth... 49 3e-07
ref|XP_004287651.1| PREDICTED: sm-like protein LSM1B [Fragaria v... 49 4e-07
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote... 48 9e-07
ref|XP_009404178.1| PREDICTED: probable U6 snRNA-associated Sm-l... 46 2e-06
ref|XP_009613010.1| PREDICTED: U6 snRNA-associated Sm-like prote... 47 4e-06
ref|XP_004235554.1| PREDICTED: probable U6 snRNA-associated Sm-l... 46 5e-06
>gb|KOM57044.1| hypothetical protein LR48_Vigan11g007600 [Vigna angularis]
Length = 148
Score = 53.5 bits (127), Expect(2) = 7e-10
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -3
Query: 546 HLQAILTV*IAEKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLEGAC 385
+L + + + EKLLVLLRD +KLMGILRSFDQF AN VLEGAC
Sbjct: 30 NLYGLTIIVVVEKLLVLLRDGRKLMGILRSFDQF-----------ANAVLEGAC 72
Score = 38.5 bits (88), Expect(2) = 7e-10
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -2
Query: 586 ISWPGSEDIFLSTSLASYLDS 524
+SW G EDI+LSTSLASYLDS
Sbjct: 1 MSWAGPEDIYLSTSLASYLDS 21
>ref|XP_008242261.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Prunus mume]
Length = 128
Score = 49.3 bits (116), Expect(2) = 4e-08
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -3
Query: 513 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLEGAC 385
+KLLVLLRD +KL+G+LRSFDQF ANVVLEGAC
Sbjct: 21 KKLLVLLRDGRKLLGLLRSFDQF-----------ANVVLEGAC 52
Score = 37.0 bits (84), Expect(2) = 4e-08
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -2
Query: 586 ISWPGSEDIFLSTSLASYLD 527
+SW G+ED FLSTSLASYLD
Sbjct: 1 MSWAGAEDTFLSTSLASYLD 20
>ref|XP_009390858.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1 [Musa
acuminata subsp. malaccensis]
Length = 128
Score = 50.1 bits (118), Expect(2) = 6e-08
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = -3
Query: 513 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLEGAC 385
+KLLVLLRD +KL+GILRSFDQF ANVVLEGAC
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANVVLEGAC 52
Score = 35.4 bits (80), Expect(2) = 6e-08
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -2
Query: 586 ISWPGSEDIFLSTSLASYLD 527
+SW G ED+ LSTSLASYLD
Sbjct: 1 MSWSGPEDVLLSTSLASYLD 20
>ref|XP_012856715.1| PREDICTED: sm-like protein LSM1B [Erythranthe guttatus]
gi|604301718|gb|EYU21304.1| hypothetical protein
MIMGU_mgv1a016277mg [Erythranthe guttata]
Length = 128
Score = 48.5 bits (114), Expect(2) = 3e-07
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = -3
Query: 513 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLEGAC 385
+KLLVLLRD +KL+GILRSFDQF AN VLEGAC
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANAVLEGAC 52
Score = 34.7 bits (78), Expect(2) = 3e-07
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -2
Query: 586 ISWPGSEDIFLSTSLASYLD 527
+SW G ED++ STSLASYLD
Sbjct: 1 MSWAGPEDVYTSTSLASYLD 20
>ref|XP_004287651.1| PREDICTED: sm-like protein LSM1B [Fragaria vesca subsp. vesca]
Length = 128
Score = 49.3 bits (116), Expect(2) = 4e-07
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -3
Query: 513 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLEGAC 385
+KLLVLLRD +KL+G+LRSFDQF ANVVLEGAC
Sbjct: 21 KKLLVLLRDGRKLLGLLRSFDQF-----------ANVVLEGAC 52
Score = 33.5 bits (75), Expect(2) = 4e-07
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2
Query: 586 ISWPGSEDIFLSTSLASYLD 527
+SW G ED LSTSLASYLD
Sbjct: 1 MSWAGPEDSLLSTSLASYLD 20
>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
product [Vitis vinifera]
Length = 128
Score = 48.1 bits (113), Expect(2) = 9e-07
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -3
Query: 513 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLEGAC 385
+KLLVLLRD +KL+G+LRSFDQF AN VLEGAC
Sbjct: 21 KKLLVLLRDGRKLLGVLRSFDQF-----------ANAVLEGAC 52
Score = 33.5 bits (75), Expect(2) = 9e-07
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 586 ISWPGSEDIFLSTSLASYLD 527
+SW G ED+ STSLASYLD
Sbjct: 1 MSWAGPEDLLFSTSLASYLD 20
>ref|XP_009404178.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1 [Musa
acuminata subsp. malaccensis]
Length = 128
Score = 45.8 bits (107), Expect(2) = 2e-06
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = -3
Query: 513 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLEGAC 385
+KLLVLLRD +KL+GIL SFDQF ANVVL+GAC
Sbjct: 21 KKLLVLLRDGRKLLGILCSFDQF-----------ANVVLQGAC 52
Score = 34.3 bits (77), Expect(2) = 2e-06
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2
Query: 586 ISWPGSEDIFLSTSLASYLD 527
+SW G EDI STSLASYLD
Sbjct: 1 MSWAGPEDILFSTSLASYLD 20
>ref|XP_009613010.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Nicotiana
tomentosiformis] gi|698451832|ref|XP_009778571.1|
PREDICTED: U6 snRNA-associated Sm-like protein LSm1
[Nicotiana sylvestris]
Length = 128
Score = 46.6 bits (109), Expect(2) = 4e-06
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = -3
Query: 513 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLEGAC 385
+KLLVLLRD +KL+G LRSFDQF AN VLEGAC
Sbjct: 21 KKLLVLLRDGRKLLGTLRSFDQF-----------ANAVLEGAC 52
Score = 32.7 bits (73), Expect(2) = 4e-06
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 586 ISWPGSEDIFLSTSLASYLD 527
+SW EDI+ STSLASYLD
Sbjct: 1 MSWASPEDIYTSTSLASYLD 20
>ref|XP_004235554.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Solanum lycopersicum] gi|565351988|ref|XP_006342929.1|
PREDICTED: probable U6 snRNA-associated Sm-like protein
LSm1-like [Solanum tuberosum]
Length = 128
Score = 46.2 bits (108), Expect(2) = 5e-06
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = -3
Query: 513 EKLLVLLRDDQKLMGILRSFDQFGLLSVYLLIYTANVVLEGAC 385
+KLLVLLRD +KL+GILRSFDQF AN VLE AC
Sbjct: 21 KKLLVLLRDGRKLLGILRSFDQF-----------ANAVLESAC 52
Score = 32.7 bits (73), Expect(2) = 5e-06
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2
Query: 586 ISWPGSEDIFLSTSLASYLD 527
+SW EDI+ STSLASYLD
Sbjct: 1 MSWASPEDIYTSTSLASYLD 20