BLASTX nr result

ID: Papaver30_contig00036387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00036387
         (599 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010274821.1| PREDICTED: putative SWI/SNF-related matrix-a...    70   6e-10
ref|XP_009623281.1| PREDICTED: putative SWI/SNF-related matrix-a...    59   3e-06
ref|XP_009772967.1| PREDICTED: putative SWI/SNF-related matrix-a...    58   3e-06

>ref|XP_010274821.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3 [Nelumbo nucifera]
           gi|720060268|ref|XP_010274822.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3
           [Nelumbo nucifera]
          Length = 1191

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 39/208 (18%)
 Frame = -3

Query: 543 IVEPEEENIKQIKSVLGD-ISKPAILRALMLADNDIDEAIKILQYRQGGTVTPLATVKKT 367
           +V  E+E I  ++S++GD + +  ILRAL +  N ++ AIK++     G + P  TVK+T
Sbjct: 4   VVAGEKEYIATVRSIVGDNVLESDILRALSVCGNSVNAAIKVI-LNTPGFIAPSITVKRT 62

Query: 366 VTSTGSRVSAVVKQEVSDTPEEEGDLNNELKKPKVEESVCHDKQIVLVKEERKELEPEMK 187
           +T TG+R+S  +KQE S+   ++  +     K +V+E    +  +VL  E   E+ P  K
Sbjct: 63  LTITGARISTQIKQEGSEDSSQDDPVKGLDPKIRVKE---ENLDMVLASESSTEIVP-AK 118

Query: 186 NLDLAL--------------------------ILPKVKEEPEMSS-----MDIDKES--- 109
            L+LA                           ++ +V EEP+M S     M++D      
Sbjct: 119 GLELATRVKEEKPDMGFENEVHMKADPVKELGVMIRVNEEPDMGSQNEAPMEVDPVKVSE 178

Query: 108 ----VKEEKTDLGFNQCTDLVPVSVTEQ 37
               VKEEK D  F        VSV E+
Sbjct: 179 AILVVKEEKPDTSFEN-----KVSVKEE 201


>ref|XP_009623281.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3 [Nicotiana tomentosiformis]
          Length = 1183

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
 Frame = -3

Query: 546 KIVEPEEENIKQIKSVLG-DISKPAILRALMLADNDIDEAIKILQYRQGGTVTPLATVKK 370
           K+    E+ IK IKS++G +I++ AIL AL   +N+ D AI  L        +P + V K
Sbjct: 6   KVESENEKKIKMIKSIIGSEITEKAILEALSQQNNNPDAAINHLL-----DSSPPSAVHK 60

Query: 369 TVTSTGSRVSAVVKQEVSDTPEEEGDLNNELKKPKVEESVCHDKQIVLVKEER----KEL 202
           TVTSTG R+S +VKQE  +  E  G       K K E  V  D++ + V+E++     E 
Sbjct: 61  TVTSTGVRISHMVKQE--NVEESVGCGTVHGLKVKEEPDVVIDEKGLEVEEKKVLDGYES 118

Query: 201 EPEMKNLDLALILP------KVKEEPEMSSMDIDKESVKEEK 94
           +  +   DL+          KVKEEP+M    I+++ +K E+
Sbjct: 119 KGSVGKCDLSFDGEEMVNGLKVKEEPDMG---IEEKGLKVEE 157


>ref|XP_009772967.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3 [Nicotiana sylvestris]
          Length = 1191

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 16/154 (10%)
 Frame = -3

Query: 549 MKIVEPE-EENIKQIKSVLG-DISKPAILRALMLADNDIDEAIKILQYRQGGTVTPLATV 376
           + +VE + E+ +K IKS++G +I++ AIL AL   +N+ D AI  L        +PL+ V
Sbjct: 12  LDLVESDNEKKVKMIKSIIGSEITEKAILEALSQQNNNPDAAINHLL-----DSSPLSAV 66

Query: 375 KKTVTSTGSRVSAVVKQEVSD-----------TPEEEGDLNNELKKPKVEESVCHDKQIV 229
            KTVTSTG R+SA VKQE  +             +EE D+  + K  KVEE     K+++
Sbjct: 67  HKTVTSTGVRISATVKQENVEESVGFGKVHGLNVKEEPDVGIDEKGLKVEE-----KKVI 121

Query: 228 LVKEERKEL---EPEMKNLDLALILPKVKEEPEM 136
              E +  +   +      ++   L KVKEEP+M
Sbjct: 122 DGYESKGSVGKCDTSFNGEEMVNGL-KVKEEPDM 154


Top