BLASTX nr result
ID: Papaver30_contig00033283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00033283
(487 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei... 62 5e-13
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 62 2e-12
ref|XP_011070096.1| PREDICTED: U5 small nuclear ribonucleoprotei... 60 3e-12
gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlise... 57 3e-12
ref|XP_009787289.1| PREDICTED: U5 small nuclear ribonucleoprotei... 58 6e-12
ref|XP_009606072.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 58 7e-12
ref|XP_011099903.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 59 1e-11
ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotei... 59 2e-11
ref|XP_002466163.1| hypothetical protein SORBIDRAFT_01g002670 [S... 52 3e-10
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,... 55 6e-10
emb|CDP17811.1| unnamed protein product [Coffea canephora] 52 6e-10
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,... 55 6e-10
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 55 6e-10
ref|XP_001757495.1| predicted protein [Physcomitrella patens] gi... 54 1e-09
ref|XP_002318725.2| U5 small nuclear ribonucleoprotein helicase ... 52 1e-09
ref|XP_011044153.1| PREDICTED: U5 small nuclear ribonucleoprotei... 51 7e-09
ref|XP_010039729.1| PREDICTED: uncharacterized protein LOC104428... 49 7e-09
ref|XP_006648214.1| PREDICTED: U5 small nuclear ribonucleoprotei... 49 1e-08
ref|XP_011024026.1| PREDICTED: U5 small nuclear ribonucleoprotei... 50 1e-08
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei... 50 1e-08
>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
[Solanum lycopersicum]
Length = 2174
Score = 61.6 bits (148), Expect(2) = 5e-13
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ+N +KS REEAR K VD G GE + L+ +GWL Q QFLD
Sbjct: 384 RATAKERQKNLEKSIREEARRLKDESGVD-----GDGERKALVDRDLDNGWLMGQRQFLD 438
Query: 275 LETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTL 150
L++++F Q G C + + +EVHVP KP L
Sbjct: 439 LDSLAFQQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPRPL 483
Score = 38.9 bits (89), Expect(2) = 5e-13
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYENRTLS 40
++ S P WAQPAF M LNRVQ +VYE S
Sbjct: 490 VKISSIPEWAQPAFSGMTQLNRVQSKVYETALFS 523
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 61.6 bits (148), Expect(2) = 2e-12
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ+N +KS REEAR K VD G GE + L+ +GWL Q QFLD
Sbjct: 384 RATAKERQKNLEKSIREEARRLKDESGVD-----GDGERKALVDRDLDNGWLMGQRQFLD 438
Query: 275 LETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTL 150
L++++F Q G C + + +EVHVP KP L
Sbjct: 439 LDSLAFQQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPRPL 483
Score = 37.4 bits (85), Expect(2) = 2e-12
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYENRTLS 40
++ S P WA+PAF M LNRVQ +VYE S
Sbjct: 490 VKISSIPEWARPAFSGMTQLNRVQSKVYETALFS 523
>ref|XP_011070096.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Sesamum indicum] gi|747048192|ref|XP_011070097.1|
PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Sesamum indicum]
gi|747048194|ref|XP_011070098.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like [Sesamum
indicum]
Length = 2167
Score = 60.5 bits (145), Expect(2) = 3e-12
Identities = 44/106 (41%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ+N +KS REEAR K D G E + L+ GWL+ Q Q LD
Sbjct: 383 RATAKERQKNLEKSIREEARRLKDETGGD-----GDRERRELVDRDADGGWLKGQRQLLD 437
Query: 275 LETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTLA 147
LE+++FHQ G C + + +EVHVP KP LA
Sbjct: 438 LESLAFHQGGLLMANKKCELPVGSYRNHRKGYEEVHVPALKPVPLA 483
Score = 37.4 bits (85), Expect(2) = 3e-12
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 153 TGPKL-RFQSCPSWAQPAFDRMI*LNRVQIEVYENRTLS 40
+G KL + P WAQPAF M LNRVQ +VYE S
Sbjct: 484 SGEKLVKISDMPDWAQPAFKGMSQLNRVQSKVYETALFS 522
>gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlisea aurea]
Length = 977
Score = 56.6 bits (135), Expect(2) = 3e-12
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RA+AKERQ+N +KS R+EAR K D + G +++ L+ GWL+ Q Q LD
Sbjct: 401 RASAKERQKNLEKSIRDEARRLK-----DETVGDGDRDLRQLVDRDADGGWLKGQRQVLD 455
Query: 275 LETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTLA 147
L+ ++FHQ G C + + +EVHVP KP L+
Sbjct: 456 LDNLAFHQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPLPLS 501
Score = 41.2 bits (95), Expect(2) = 3e-12
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 156 NTGPKL-RFQSCPSWAQPAFDRMI*LNRVQIEVYENRTLS 40
+ G KL + P WAQPAF+ M+ LNRVQ +VYE S
Sbjct: 501 SAGEKLVKISEMPDWAQPAFENMVSLNRVQSKVYETALFS 540
>ref|XP_009787289.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Nicotiana sylvestris]
Length = 2181
Score = 58.2 bits (139), Expect(2) = 6e-12
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*V-HGWLEEQHQFL 279
RAT KERQ+ +KS REEAR K VD G GE + + R V +GWL Q Q L
Sbjct: 388 RATPKERQKILEKSIREEARRLKDETGVD-----GGGERRTAVVDRDVDNGWLMGQRQLL 442
Query: 278 DLETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTLA 147
DL+ ++FHQ G C + + +EVHVP KP LA
Sbjct: 443 DLDDLAFHQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPKPLA 489
Score = 38.9 bits (89), Expect(2) = 6e-12
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYENRTLS 40
++ S P WAQPAF M LNRVQ +VYE S
Sbjct: 495 VKISSIPEWAQPAFSGMTQLNRVQSKVYETALFS 528
>ref|XP_009606072.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Nicotiana tomentosiformis]
Length = 2189
Score = 57.8 bits (138), Expect(2) = 7e-12
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*V-HGWLEEQHQFL 279
RAT KERQ+ +KS REEAR K VD G GE + + R V +GWL Q Q L
Sbjct: 388 RATPKERQKILEKSIREEARRLKDETGVD-----GDGERRTAVVDRDVDNGWLLGQRQLL 442
Query: 278 DLETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTLA 147
DL+ ++FHQ G C + + +EVHVP KP LA
Sbjct: 443 DLDDLAFHQGGLLMANKKCELPVGSYRNHKKGYEEVHVPALKPKPLA 489
Score = 38.9 bits (89), Expect(2) = 7e-12
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYENRTLS 40
++ S P WAQPAF M LNRVQ +VYE S
Sbjct: 495 VKISSIPEWAQPAFSGMTQLNRVQSKVYETALFS 528
>ref|XP_011099903.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Sesamum indicum]
Length = 2166
Score = 58.5 bits (140), Expect(2) = 1e-11
Identities = 43/106 (40%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ++ +KS REEAR K D G E + L+ GWL+ Q Q LD
Sbjct: 383 RATAKERQKHLEKSIREEARRLKDETGGD-----GDRERRELVDRDADGGWLKGQRQLLD 437
Query: 275 LETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTLA 147
LE+++FHQ G C + + +EVHVP KP LA
Sbjct: 438 LESLAFHQGGLLMANKKCELPVGSYRNHRKGYEEVHVPALKPVPLA 483
Score = 37.4 bits (85), Expect(2) = 1e-11
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 153 TGPKL-RFQSCPSWAQPAFDRMI*LNRVQIEVYENRTLS 40
+G KL + P WAQPAF M LNRVQ +VYE S
Sbjct: 484 SGEKLVKISDMPDWAQPAFKGMSQLNRVQSKVYETALFS 522
>ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Nelumbo nucifera] gi|720046748|ref|XP_010270596.1|
PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Nelumbo nucifera]
Length = 2177
Score = 59.3 bits (142), Expect(2) = 2e-11
Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ+N +KS REEAR R+ +S G E + GWL+ Q Q LD
Sbjct: 386 RATAKERQKNLEKSIREEAR----RLKDESGAVDGDRERRGYADRDAESGWLKGQRQLLD 441
Query: 275 LETISFHQVGFTDEVSACCQALLESLQR----IQEVHVPVPKPTTLA 147
L++++FHQ G + C+ L S + +EVHVP KP LA
Sbjct: 442 LDSLAFHQGGLL-MANKKCELPLGSFRNQNKGYEEVHVPALKPKPLA 487
Score = 35.8 bits (81), Expect(2) = 2e-11
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
++ P WAQPAF M LNRVQ +VYE
Sbjct: 493 IKISVMPDWAQPAFKGMTQLNRVQSKVYE 521
>ref|XP_002466163.1| hypothetical protein SORBIDRAFT_01g002670 [Sorghum bicolor]
gi|241920017|gb|EER93161.1| hypothetical protein
SORBIDRAFT_01g002670 [Sorghum bicolor]
Length = 1010
Score = 51.6 bits (122), Expect(2) = 3e-10
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RA+AKERQ+N +KS R+EA+ V +R G+++ W + Q + LD
Sbjct: 398 RASAKERQENVEKSIRDEAKRLLNNDGVSNR-RAAEGDME--------SEWFKGQKRLLD 448
Query: 275 LETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPK 162
L+++SFHQ G + C + S + +EVHVP PK
Sbjct: 449 LDSLSFHQGGLFMSIKKCELPTGSFRISHKGYEEVHVPAPK 489
Score = 39.7 bits (91), Expect(2) = 3e-10
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 159 YNTGPKL-RFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
Y TG K+ + P WA+PAFD M LNR+Q VY+
Sbjct: 493 YETGEKIVKISDMPEWAKPAFDGMTQLNRIQSRVYD 528
>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 54.7 bits (130), Expect(2) = 6e-10
Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ+N +KS REEAR K D + G + + L GWL+ Q Q LD
Sbjct: 384 RATAKERQKNLEKSIREEARRLK-----DESVGDGDRDRRGLADRDTDGGWLKGQRQLLD 438
Query: 275 LETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTL 150
L++++F Q G C + + +EVHVP PK L
Sbjct: 439 LDSLAFEQGGLLMANKKCELPMGSYKHHAKGYEEVHVPAPKSKPL 483
Score = 35.4 bits (80), Expect(2) = 6e-10
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
++ P WAQPAF M LNRVQ +VYE
Sbjct: 490 VKISEMPEWAQPAFKGMQQLNRVQSKVYE 518
>emb|CDP17811.1| unnamed protein product [Coffea canephora]
Length = 2120
Score = 52.4 bits (124), Expect(2) = 6e-10
Identities = 44/108 (40%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIE-TG*GEVQ*LIAIR*VHGWLEEQHQFL 279
RATAKERQ+N +KS REEAR K D + E G G+ GWL Q Q +
Sbjct: 385 RATAKERQKNLEKSIREEARRLKDETGGDGQRERRGQGDRD------ADGGWLSGQRQLI 438
Query: 278 DLETISFHQVGFTDEVSACCQALLESLQRIQ-----EVHVPVPKPTTL 150
DL++++F+Q G C L E R Q EVHVP KP L
Sbjct: 439 DLDSLAFNQGGLLMANKRC--ELPEGSFRNQKKGYEEVHVPALKPKPL 484
Score = 37.7 bits (86), Expect(2) = 6e-10
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
++ S P WAQPAF M LNRVQ +VYE
Sbjct: 491 VKISSIPDWAQPAFKGMTQLNRVQSKVYE 519
>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 54.7 bits (130), Expect(2) = 6e-10
Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ+N +KS REEAR K D + G + + L GWL+ Q Q LD
Sbjct: 270 RATAKERQKNLEKSIREEARRLK-----DESVGDGDRDRRGLADRDTDGGWLKGQRQLLD 324
Query: 275 LETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTL 150
L++++F Q G C + + +EVHVP PK L
Sbjct: 325 LDSLAFEQGGLLMANKKCELPMGSYKHHAKGYEEVHVPAPKSKPL 369
Score = 35.4 bits (80), Expect(2) = 6e-10
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
++ P WAQPAF M LNRVQ +VYE
Sbjct: 376 VKISEMPEWAQPAFKGMQQLNRVQSKVYE 404
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 55.1 bits (131), Expect(2) = 6e-10
Identities = 42/109 (38%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVD-SRIETG*GEVQ*LIAIR*VHGWLEEQHQFL 279
RATAKERQ+N +KS REEAR K D R G L+ GW++ Q Q L
Sbjct: 19 RATAKERQKNLEKSIREEARRLKDESGGDYDRDRRG------LVDRDAESGWVKGQPQLL 72
Query: 278 DLETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPKPTTLAQN 141
DLE+I+F Q G C + + + +EVHVP KP +A +
Sbjct: 73 DLESIAFEQGGHLMATKKCDLPVGSYRHTSKGYEEVHVPALKPRPIASD 121
Score = 35.0 bits (79), Expect(2) = 6e-10
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
++ P WAQPAF M LNRVQ VYE
Sbjct: 125 VKISDMPGWAQPAFKGMQQLNRVQSRVYE 153
>ref|XP_001757495.1| predicted protein [Physcomitrella patens]
gi|162691189|gb|EDQ77552.1| predicted protein
[Physcomitrella patens]
Length = 2180
Score = 53.9 bits (128), Expect(2) = 1e-09
Identities = 44/119 (36%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEA------------RG*KKRVPVDSRIETG*GEVQ*LIAIR*V 312
RATAKERQ+N ++S REEA RG +K D + G GE
Sbjct: 383 RATAKERQKNLERSIREEAKKLRDDGGEAADRGRRK----DREVGVGGGE---------- 428
Query: 311 HGWLEEQHQFLDLETISFHQVGFTDEVSACCQALLE---SLQRIQEVHVPVPKPTTLAQ 144
GWL+ Q Q LDLE ++FHQ G C L + +EVHVP KP A+
Sbjct: 429 SGWLKGQRQLLDLEQLTFHQGGLLMANKRCELPPLSYRTPKKGYEEVHVPHLKPKPFAE 487
Score = 35.4 bits (80), Expect(2) = 1e-09
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
++ P WAQPAF M LNRVQ +VYE
Sbjct: 492 VKISDMPDWAQPAFKGMKSLNRVQSKVYE 520
>ref|XP_002318725.2| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|550326778|gb|EEE96945.2| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2186
Score = 52.4 bits (124), Expect(2) = 1e-09
Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVD-SRIETG*GEVQ*LIAIR*VHGWLEEQHQFL 279
RATAKERQ+N +KS REEAR K D R G L+ GWL+ Q Q L
Sbjct: 390 RATAKERQKNLEKSIREEARWLKDGAGGDGDRGRRG------LVDRDAESGWLKGQPQLL 443
Query: 278 DLETISFHQVGFTDEVSACCQALLESLQR----IQEVHVPVPKPTTLAQN 141
DL++I+F Q + C + S + +EVHVP KP + N
Sbjct: 444 DLDSIAFEQGAGLLMANKKCDLPVGSFKHQKKGYEEVHVPALKPRAIPPN 493
Score = 36.6 bits (83), Expect(2) = 1e-09
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
++ P WAQPAF+ M LNRVQ +VYE
Sbjct: 497 VKISEMPDWAQPAFEGMQQLNRVQSKVYE 525
>ref|XP_011044153.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Populus euphratica] gi|743901662|ref|XP_011044154.1|
PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
helicase-like [Populus euphratica]
Length = 2183
Score = 51.2 bits (121), Expect(2) = 7e-09
Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
R TAKERQ+N +KS REEAR K D G + L+ GWL+ Q Q LD
Sbjct: 387 RTTAKERQKNLEKSIREEARWLKNEAGGD-----GDRGWRGLVDRDAESGWLKGQPQLLD 441
Query: 275 LETISFHQVGFTDEVSACCQALLESLQR----IQEVHVPVPKPTTLAQN*DF 132
L++I+F Q + C + S + +EVHVP KP + N F
Sbjct: 442 LDSIAFEQGTGLLMANKKCDLPVGSFKHQKKGYEEVHVPALKPRAIPPNETF 493
Score = 35.4 bits (80), Expect(2) = 7e-09
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
++ P WAQPAF+ M LNRVQ ++YE
Sbjct: 494 VKISEMPDWAQPAFEGMQQLNRVQSKLYE 522
>ref|XP_010039729.1| PREDICTED: uncharacterized protein LOC104428436 [Eucalyptus
grandis]
Length = 823
Score = 48.9 bits (115), Expect(2) = 7e-09
Identities = 45/110 (40%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ+N +KS REEAR K D +TG V A WL+ Q Q LD
Sbjct: 415 RATAKERQKNLEKSIREEARRLKDESAGDE--DTGRRGVVDRYA---EGSWLKGQRQLLD 469
Query: 275 LETISFHQVGF------TDEVSACCQALLESLQRIQEVHVPV----PKPT 156
LE+++F Q G TD + L + +EVHVPV P PT
Sbjct: 470 LESLAFEQGGLLMANRRTDLPVGSFKHLSKG---YEEVHVPVLKTKPDPT 516
Score = 37.7 bits (86), Expect(2) = 7e-09
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYENRTLS 40
++ S P WAQPAF M LNRVQ +VYE S
Sbjct: 520 VKISSLPDWAQPAFKGMQQLNRVQSKVYETALFS 553
>ref|XP_006648214.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Oryza brachyantha]
Length = 2203
Score = 48.9 bits (115), Expect(2) = 1e-08
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEAR-----------G*KKRVPVDSRIETG*GEVQ*LIAIR*VH 309
RA+AKERQ+N +KS R+EA+ G + R VD +E+G
Sbjct: 418 RASAKERQKNLEKSIRDEAKRLTKSENAGIDGARDRRAVDRDMESG-------------- 463
Query: 308 GWLEEQHQFLDLETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPK 162
WL+ Q Q LDL+++SFHQ G C + + +EVHVP K
Sbjct: 464 -WLKGQRQLLDLDSLSFHQGGLLMANKKCELPPGSFRTPHKGYEEVHVPALK 514
Score = 37.0 bits (84), Expect(2) = 1e-08
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -2
Query: 159 YNTGPKL-RFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
Y G K+ + P WAQPAF M LNRVQ +VY+
Sbjct: 518 YEAGEKIVKISDMPEWAQPAFAGMTQLNRVQSKVYD 553
>ref|XP_011024026.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Populus euphratica]
Length = 2184
Score = 50.1 bits (118), Expect(2) = 1e-08
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ+N +KS REEAR K D G + + L+ GW++ Q Q LD
Sbjct: 387 RATAKERQKNLEKSIREEARRLKDETGGD-----GDRDRRGLVDRDAESGWVKGQPQMLD 441
Query: 275 LETISFHQVGFTDEVSAC---CQALLESLQRIQEVHVPVPK 162
L++I+F Q G C + + +EVHVP K
Sbjct: 442 LDSIAFEQGGLLMANKKCDLPVGSFKHQKKGYEEVHVPALK 482
Score = 35.4 bits (80), Expect(2) = 1e-08
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYE 55
++ P WAQPAF M LNRVQ +VYE
Sbjct: 493 VKISEMPDWAQPAFKGMQQLNRVQSKVYE 521
>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Citrus sinensis]
gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Citrus sinensis]
Length = 2179
Score = 50.4 bits (119), Expect(2) = 1e-08
Identities = 44/110 (40%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Frame = -3
Query: 455 RATAKERQQNKDKSNREEARG*KKRVPVDSRIETG*GEVQ*LIAIR*VHGWLEEQHQFLD 276
RATAKERQ+N +KS REEAR K D G + + L+ GWL Q Q LD
Sbjct: 393 RATAKERQKNLEKSIREEARRLK-----DESASDGGRDRRGLVDRDADGGWL-GQRQLLD 446
Query: 275 LETISFHQVGFTDEVSACCQALLESLQRI-----QEVHVPVPKPTTLAQN 141
L+T++F Q G C L E QR +E+HVP K L N
Sbjct: 447 LDTLAFQQGGLFMANRKC--DLPEGSQRFTNKGYEEIHVPAMKHKPLDPN 494
Score = 35.0 bits (79), Expect(2) = 1e-08
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 141 LRFQSCPSWAQPAFDRMI*LNRVQIEVYEN 52
++ P WAQPAF M LNRVQ VY++
Sbjct: 498 IKISEMPEWAQPAFKGMTQLNRVQSRVYKS 527