BLASTX nr result
ID: Papaver30_contig00033174
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00033174
(4496 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 414 e-176
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 421 e-176
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 399 e-173
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 393 e-169
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 429 e-166
ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648... 401 e-159
ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isof... 395 e-158
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 385 e-158
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 437 e-158
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 394 e-157
gb|ABA95357.2| retrotransposon protein, putative, unclassified [... 388 e-156
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ... 395 e-155
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 392 e-155
ref|NP_001175365.1| Os08g0123950, partial [Oryza sativa Japonica... 375 e-154
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 419 e-153
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 419 e-153
gb|AAG13430.1|AC051634_11 putative plant disease resistance poly... 391 e-153
gb|AAP54661.2| retrotransposon protein, putative, unclassified [... 391 e-153
gb|ABF94845.1| retrotransposon protein, putative, unclassified [... 382 e-152
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja... 369 e-152
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 414 bits (1064), Expect(3) = e-176
Identities = 192/400 (48%), Positives = 266/400 (66%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+HY+ G II TD QS+ + + Q++ +Q K L+KL+ +DY ++YK G ENLV DA
Sbjct: 1034 KWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLVADA 1093
Query: 4068 LSRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
LSR P A C I+ P W +++ SY D +A ++++ + T +S +LR
Sbjct: 1094 LSRIPP-AEQCQAITTVIPEWVRDIQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGLLR 1152
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
YKGR+Y+G + R ++ S H SA GGHSG++ATY R KS FYWPG+KK V F+ C
Sbjct: 1153 YKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRECP 1212
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
+CQ K E+ GLL PL +PD W HI+MDF+EGLP S K VILVVVD+LTKY+HFI
Sbjct: 1213 ICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVILVVVDRLTKYAHFI 1272
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
+ HP+TV + F+ +I +LHG+P +I++DRD+IFTS +Q++F+++ +L ST+YH
Sbjct: 1273 AMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTSYH 1332
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQ DGQTERVN LESYLR M +P +WH+WL LAEWWYNT YHTS++M PFQA+YGY
Sbjct: 1333 PQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYP 1392
Query: 3168 PPHLAFPSTATTSVAEVESYLKQRDAMLTLLKDAFTSFKR 3049
PP + S E ++Q+DA++ LK + T +R
Sbjct: 1393 PPQINEFSVPCNVSEEARVTIEQKDAIIQKLKYSLTEAQR 1432
Score = 160 bits (404), Expect(3) = e-176
Identities = 80/160 (50%), Positives = 107/160 (66%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L + Q R+K YAD+ R++R + G+ VYLKLQPYRQT+ + +LKL +K+YGPF I++K
Sbjct: 1427 LTEAQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEK 1486
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
+G+ AYKLQLP + IH VFHVSQLK+HIG+ + +LP++ DG P A L R
Sbjct: 1487 VGRVAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRM 1546
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP 2588
I R GV+V Q L+ N P++ATWED I FP FNP
Sbjct: 1547 IPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFPSFNP 1586
Score = 99.4 bits (246), Expect(3) = e-176
Identities = 46/79 (58%), Positives = 60/79 (75%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W T +F LK M ++PVL+LPDFTK+F++E DAC GIG VLMQ GRPLA+FSK L
Sbjct: 952 WEREQTEAFETLKTHMCTSPVLSLPDFTKEFVIEADACGNGIGAVLMQSGRPLAYFSKTL 1011
Query: 4313 GPRAAALSTYDKDLLAIVQ 4257
GP+AAA S Y+K+ +AI++
Sbjct: 1012 GPKAAAQSIYEKEAMAILE 1030
Score = 311 bits (796), Expect = 5e-81
Identities = 198/630 (31%), Positives = 307/630 (48%), Gaps = 13/630 (2%)
Frame = -3
Query: 1851 KMPKLDFPRFDGDNPKS*IQKCEYYSQMHNISELHRTKMAAIHMDGKASEWYDNFCLTQD 1672
K P+L+ P F G++P +++CE + ++ +A H+ GKA +WY +
Sbjct: 204 KGPRLEIPLFSGEDPIDWLKQCEKFYEISGTPAEQWVNLAIAHLQGKAMKWYRGIGIPWQ 263
Query: 1671 VIPWPYFCQSVCARFENPAQDNIVGIFNKLAQIT-TVDAYFEEFEYYKALLLGVHHDFPE 1495
+I WP +C V RF V +F + Q TV+ Y ++FE Y L+ H E
Sbjct: 264 LITWPQWCAMVSTRFSAADTHEAVELFQNVKQYNQTVEQYIDKFEEYVDLVRREHPYLQE 323
Query: 1494 SYFIASFIGGLKEELRSSVLMFDPKTLLHAFSLARMQEQTLVMQ*KANKPTTKFFSHSYS 1315
Y + FIGGL+ +++ V P+ LL ++ + E+ A K F + +
Sbjct: 324 QYLNSCFIGGLRGDIKHDVCGHKPQGLLESYWYTKNYERAA----NARKNLLNFNRNRFQ 379
Query: 1314 NTKSIPSTSTPLKPTYIPPTPSIPQPKQIPNLPLKKLTPEQVQARKAQGLCFNCDKA*KR 1135
N P Q N+ + EQV+ +K + C+ C +
Sbjct: 380 NQAG---------------------PIQGRNVVNRGQPREQVE-KKEERKCWFCKEPWFP 417
Query: 1134 GHICK-KQYLCVLIGE------EAEEIYDTGGGESSH-DTEEEPSLESDME----ISLHA 991
H CK K+ L L+ E E EE TG E + EE P + + E +S +A
Sbjct: 418 KHQCKVKKALNALLMEGEEGKDEGEEGELTGNQEDCKLEKEEAPPDDENQEELMFVSHNA 477
Query: 990 LTGNISGDTIRIPGFIKKQAISILIDTGITHSFIDSALAVSLQYPIAQTGNLLVTVANGD 811
+ G DT + I + L+D+G T +F+D AV P+ T V VA G
Sbjct: 478 VYGTTRPDTFSVIIQINGRRAVGLVDSGSTSTFMDQDYAVRNHCPLVSTDAKKVVVAGGG 537
Query: 810 KTVSSGVCSQLDWNMQGRKFCGDLRLLPLGGCDIVLGADWLKNLRDVLFNLSKLCITFKH 631
+ S +L + +QG F ++PL G D++LGADW+ + +L K +
Sbjct: 538 ELKSEVQVPELVYQIQGETFSNKFNIIPLKGYDVILGADWIYKYSPITLDLKKRELGITK 597
Query: 630 KVKKITLTGIQQKSSLSKMSGSVVKNFFQKHSHGIVVQLFSISASPANXXXXXXXXXXLE 451
K + + + + V +K G + Q+ + + L+
Sbjct: 598 GEKTVVIQDFTRPGKHLWVDSKKVDQILRKGGLGCLFQITRVKEEETSHEIPEDIKEILQ 657
Query: 450 SFTNVFSDKASLPPQRSLDHQIPLQPNSAPVNLRPYRCPYLQKSVVENLVKEMLHSGIIQ 271
F V D LPP+R+ DH I L+ + P NLRPYR P+ QK +E ++ E++ S IQ
Sbjct: 658 EFPAVLKDPKGLPPRRNCDHVITLKSGAEPPNLRPYRVPHYQKEAMEKIIAELIESKEIQ 717
Query: 270 PSHNPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDKFPIPNIEELLDELHGSKFFTKID 91
S P++SP ++V+KKD +WR CVDYR+LN T+K+KFP+P IE+LLDEL+G+K F+K+D
Sbjct: 718 VSDIPYSSPAVMVRKKDGSWRLCVDYRQLNAQTVKNKFPMPIIEDLLDELNGAKVFSKLD 777
Query: 90 LKPGYHQIRVSPSDIHKTAFRTHHGHFEFK 1
L+ GYHQIR++ DI KTAFRTH GH+E++
Sbjct: 778 LRSGYHQIRMATQDIPKTAFRTHLGHYEYQ 807
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 421 bits (1081), Expect(3) = e-176
Identities = 197/365 (53%), Positives = 254/365 (69%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KWKHY G II TD S+ Y EQ+++ +Q K L+KLL +DYK++YKKG EN DA
Sbjct: 759 KWKHYFLGTSLIIRTDQASLKYINEQRLTEGIQHKLLIKLLSYDYKIEYKKGKENKAADA 818
Query: 4068 LSRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
LSR P VA + ++ P W E++ASY+ D K + +QL ITP P++ + +LR
Sbjct: 819 LSRIPSVAQLFS-TTIIVPTWITEILASYATDPKCTALESQLRITPQGHPPYTLTSGILR 877
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
YK RLY+G+ R+ + S H SA+GGHSG +ATY RAK FYWPGMKKD+ +V C
Sbjct: 878 YKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCP 937
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
VCQ+NK E+ GLL PLPIP+ W HISMDFIEGLP S+ K VI V+VD+ TKY+HF+
Sbjct: 938 VCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFTKYAHFV 997
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
L HPFT I +F+ + +K HGLPA IVSDRD+IFTS W+D+F+ G +LH S+AYH
Sbjct: 998 ALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQTWKDVFEKAGVKLHFSSAYH 1057
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQ DGQTERVN LE+YLRCM +PKKW + L A+WWYNT++HT+L M P+QA++G
Sbjct: 1058 PQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYAKWWYNTSFHTTLGMTPYQALHGVP 1117
Query: 3168 PPHLA 3154
PP LA
Sbjct: 1118 PPLLA 1122
Score = 159 bits (401), Expect(3) = e-176
Identities = 81/160 (50%), Positives = 104/160 (65%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L K Q RMK +AD RT+RV + G+ VYLK+QPYR S+ L +LKL +KYYGPF ++++
Sbjct: 1152 LLKAQARMKHFADMNRTERVLTVGDMVYLKMQPYRHNSLGLHSSLKLHSKYYGPFRVLER 1211
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
IG AYKL LP ++IH VFHVSQLK+HIG + P LP D +GN L P+A L+ R
Sbjct: 1212 IGSVAYKLLLPASSQIHPVFHVSQLKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRL 1271
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP 2588
I +N V Q +Q N + ATWED I+ FP FNP
Sbjct: 1272 IPQNNAPVVQWKVQWANLPLSAATWEDAAFISKVFPAFNP 1311
Score = 91.7 bits (226), Expect(3) = e-176
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = -1
Query: 4496 SWSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKP 4317
+W +F +K + PVLA+P+FT+ FILE DA G+G VLMQ RPLA+FSK
Sbjct: 676 TWQDEQQQAFATIKDKLAHAPVLAMPNFTQPFILEADASGTGLGAVLMQNNRPLAYFSKA 735
Query: 4316 LGPRAAALSTYDKDLLAIVQ 4257
+GP+AA LSTYDK+ LAI++
Sbjct: 736 IGPKAAGLSTYDKEALAILE 755
Score = 97.8 bits (242), Expect = 8e-17
Identities = 68/245 (27%), Positives = 107/245 (43%)
Frame = -3
Query: 1896 HSNFHSGGRDSNQFHKMPKLDFPRFDGDNPKS*IQKCEYYSQMHNISELHRTKMAAIHMD 1717
H+N+ ++ + +DFP F+GD P+S I+K E Y ++ E + +A +H+
Sbjct: 271 HTNYAHRPHSADPAKRSRNVDFPTFEGDYPESWIRKAEKYFSLYQTPEEDKVLLAEVHIS 330
Query: 1716 GKASEWYDNFCLTQDVIPWPYFCQSVCARFENPAQDNIVGIFNKLAQITTVDAYFEEFEY 1537
G+A +W ++ + + WP F VC RF ++ I F L Q +VD+Y ++FE
Sbjct: 331 GRADQWIESSAVPTASLSWPEFKTMVCQRFAAKSKIEITETFRNLKQYGSVDSYIDKFEE 390
Query: 1536 YKALLLGVHHDFPESYFIASFIGGLKEELRSSVLMFDPKTLLHAFSLARMQEQTLVMQ*K 1357
AL+ + E YF+ FI GLK ++ + +L+ A+ AR +
Sbjct: 391 TMALVKRSNPTLTEDYFLDYFISGLKGHIKRPLKSLSIYSLVTAYEHARNYDVI------ 444
Query: 1356 ANKPTTKFFSHSYSNTKSIPSTSTPLKPTYIPPTPSIPQPKQIPNLPLKKLTPEQVQARK 1177
P + +NT SIPS TP IP P P K V K
Sbjct: 445 ---PRS-------ANTSSIPSNR---------ETPKIP-----PKHPTKDDKQSTVTHTK 480
Query: 1176 AQGLC 1162
G C
Sbjct: 481 FSGKC 485
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 399 bits (1026), Expect(3) = e-173
Identities = 190/405 (46%), Positives = 261/405 (64%), Gaps = 1/405 (0%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+HY+ G II TD QS+ + + Q++ +Q K L+KL+ FDY ++YK G ENLV DA
Sbjct: 1057 KWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYVIEYKSGKENLVADA 1116
Query: 4068 LSRRPHVAAS-CNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVL 3892
LSR P++ C I++ P W Q++ SY D A ++++ + + + +L
Sbjct: 1117 LSRSPNLKEEQCLPITVVVPEWVQDIKRSYEEDIFAHKILSLIETDGDPERHYKLESGLL 1176
Query: 3891 RYKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTC 3712
+YKGR+Y+G + R +L + H S GGHSGI+ATY R K FYWPG+KK V ++ C
Sbjct: 1177 KYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQVEHYIREC 1236
Query: 3711 DVCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHF 3532
CQ K E+ GLL PL +PD W HI+MDFIEGLP S+ K VILVVVD+LTKY+HF
Sbjct: 1237 PTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYAHF 1296
Query: 3531 IGLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAY 3352
+ L HP+TV + + F+ +I KLHG+P IV+DRD++FTSNF+Q++F+ +L STA+
Sbjct: 1297 LALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFSTAH 1356
Query: 3351 HPQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGY 3172
HPQ DGQTERVN LESYLR M +P+KW +WL LAEWWYNT YHTS++M PFQA+YGY
Sbjct: 1357 HPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALYGY 1416
Query: 3171 LPPHLAFPSTATTSVAEVESYLKQRDAMLTLLKDAFTSFKRE*SF 3037
PP + + E L+ + +L LK + +R F
Sbjct: 1417 PPPQITEFAIPCNMSEEARVTLEDKALILQKLKSSIGEAQRRIKF 1461
Score = 162 bits (410), Expect(3) = e-173
Identities = 82/156 (52%), Positives = 103/156 (66%)
Frame = -2
Query: 3055 QERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQKIGQA 2876
Q R+KFYADK R++R G+ VYLKLQPYRQ ++ + +LKL +KYYGPF +++K+G
Sbjct: 1456 QRRIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAV 1515
Query: 2875 AYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRTIIRN 2696
AYKLQLP A IH VFHVSQLK+H+GA I P+LP + DG P+A L R I R+
Sbjct: 1516 AYKLQLPDGAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRH 1575
Query: 2695 GVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP 2588
V Q LI N PA+ATWED +I FP F P
Sbjct: 1576 NEPVTQWLILWENLTPAEATWEDASYIQAAFPNFQP 1611
Score = 100 bits (248), Expect(3) = e-173
Identities = 45/79 (56%), Positives = 62/79 (78%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W +F LK+ M ++PVLALPDF++ F++ETDAC +GIG VLMQ+GRPLA+FSK L
Sbjct: 975 WGDTQQEAFELLKEKMCNSPVLALPDFSQPFVIETDACGIGIGAVLMQKGRPLAYFSKAL 1034
Query: 4313 GPRAAALSTYDKDLLAIVQ 4257
GP+AAA S Y+K+ +AI++
Sbjct: 1035 GPKAAAQSVYEKEAIAILE 1053
Score = 312 bits (799), Expect = 2e-81
Identities = 204/647 (31%), Positives = 315/647 (48%), Gaps = 19/647 (2%)
Frame = -3
Query: 1887 FHSGGRDSNQFH----KMPKLDFPRFDGDNPKS*IQKCEYYSQMHNISELHRTKMAAIHM 1720
F + R+ NQ+ K P+L+ F G++P +++CE + ++ +A H+
Sbjct: 212 FGTAAREGNQYAEAVIKGPRLEISLFTGEDPVDWLKQCEKFFEITGTPVDQWVNLAVAHL 271
Query: 1719 DGKASEWYDNFCLTQDVIPWPYFCQSVCARFENPAQDNIVGIFNKLAQI-TTVDAYFEEF 1543
G+A++W+ L VI WP +C VC RF V +F + Q TV+ Y ++F
Sbjct: 272 YGRAAKWFRGVGLPWQVITWPQWCAMVCTRFSTANTHEAVELFQNVKQYGMTVEQYIDKF 331
Query: 1542 EYYKALLLGVHHDFPESYFIASFIGGLKEELRSSVLMFDPKTLLHAFSLARMQEQTLVMQ 1363
E Y L+ H E YF + FI GL+ +++ V P+ LL ++ A+ E+
Sbjct: 332 EEYMDLVRRDHPYLQEPYFTSCFISGLRGDIKHDVCGQKPQGLLESYWYAKNYEKAA--- 388
Query: 1362 *KANKPTTKFFSHSYSNTKSIPSTSTPLKPTYIPPTPSIPQPKQIPNLPLKKLTPEQVQA 1183
+ K F N + + K Y K P Q
Sbjct: 389 -NSRKAAANF------NRNRLQTGGNTGKNVY------------------NKGQPRQEGD 423
Query: 1182 RKAQGLCFNCDKA*KRGHICK-KQYLCVLIGE------------EAEEIYDTGGGESSHD 1042
+K + C+ C + H CK KQ + L+ E E EEI GE +
Sbjct: 424 KKEEKKCWFCKEPWFPRHQCKVKQAIHALLVENEESVEVEEDSVEEEEIKGEKQGEKLPE 483
Query: 1041 TEEEPSLESDMEISLHALTGNISGDTIRIPGFIKKQAISILIDTGITHSFIDSALAVSLQ 862
E E M IS A+ G DT + + + L+D+G T +F+DS A+ Q
Sbjct: 484 QTENVQ-EELMSISQSAVYGLTRPDTFSVMIKVNGKKAVGLVDSGSTTTFMDSKFAIKSQ 542
Query: 861 YPIAQTGNLLVTVANGDKTVSSGVCSQLDWNMQGRKFCGDLRLLPLGGCDIVLGADWLKN 682
+ T V VA G + S + +++ +QG F LL L DI+LGADW+
Sbjct: 543 CTLENTKMRKVIVAGGGELKSELIVPGMEYEIQGESFTNSFNLLSLERYDIILGADWIFK 602
Query: 681 LRDVLFNLSKLCITFKHKVKKITLTGIQQKSSLSKMSGSVVKNFFQKHSHGIVVQLFSIS 502
+ +L K + +++ + + ++S + +K + G V+Q+ +I+
Sbjct: 603 YSPITLDLRKREMKITKGGRELEIQDFTKPGKYFQVSNKKMGKMIKKGALGCVIQINAIT 662
Query: 501 -ASPANXXXXXXXXXXLESFTNVFSDKASLPPQRSLDHQIPLQPNSAPVNLRPYRCPYLQ 325
S L+SF V + LPP+RS DH I L+ S P NLRPYR P+ Q
Sbjct: 663 DQSNVEVGIPKDIQIVLQSFPKVLKEPKGLPPRRSCDHVINLKVGSEPPNLRPYRVPHFQ 722
Query: 324 KSVVENLVKEMLHSGIIQPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDKFPIPN 145
K +E+++ E+ + I+ S +P+ SP ++V+KKD +WR CVDYR+LN TIK+KFP+P
Sbjct: 723 KGAMEDIITELFRTQEIRISDSPYVSPAVMVRKKDGSWRLCVDYRQLNAQTIKNKFPMPI 782
Query: 144 IEELLDELHGSKFFTKIDLKPGYHQIRVSPSDIHKTAFRTHHGHFEF 4
IE+LLDELHG+K F+K+DL+ GYHQIR++ DI KTAFRTH GH+E+
Sbjct: 783 IEDLLDELHGAKVFSKLDLRSGYHQIRMAEGDIPKTAFRTHLGHYEY 829
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 393 bits (1009), Expect(3) = e-169
Identities = 183/397 (46%), Positives = 263/397 (66%), Gaps = 3/397 (0%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+HY+ G II TD QS+ + + Q++ +Q K L+KL+ +DY ++YK G ENLV DA
Sbjct: 919 KWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYTIEYKSGKENLVADA 978
Query: 4068 LSRRPH---VAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANR 3898
LSR P VA C+ +++ P W ++ SY D +A ++++ + +
Sbjct: 979 LSRLPQKEAVADRCHPMTVVIPEWIVDIQRSYENDVQAHKILSLIGTAADPDREYKLEAG 1038
Query: 3897 VLRYKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVS 3718
+L+YKGR+Y+G + R ++++ H S+ GGHSG++AT+ R K FYW GM+ +V F+
Sbjct: 1039 LLKYKGRIYVGEATDIRRQLITTYHSSSFGGHSGMRATHHRIKMLFYWHGMRGEVERFIR 1098
Query: 3717 TCDVCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYS 3538
C CQ K E+ GLL PL IPD W HI+MDFIEGLP S+ K VILVVVD+LTKY+
Sbjct: 1099 ECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYA 1158
Query: 3537 HFIGLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLST 3358
HFI L HP+ V + F+ +I KLHG+P I++DRD+IFTS+ +Q++F+A+ +L ST
Sbjct: 1159 HFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDRIFTSSLFQEIFKAMKVKLRFST 1218
Query: 3357 AYHPQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMY 3178
AYHPQ+DGQTERVN LESYLR M +P KW++WL LAEWWYNT +HT+++M PF+AMY
Sbjct: 1219 AYHPQMDGQTERVNQCLESYLRNMTFQEPHKWYSWLALAEWWYNTTFHTAIQMTPFKAMY 1278
Query: 3177 GYLPPHLAFPSTATTSVAEVESYLKQRDAMLTLLKDA 3067
GY PP + S E +++++A+L LK++
Sbjct: 1279 GYSPPQINEFSVPCNISEEARVTIEEKEAILNKLKNS 1315
Score = 164 bits (416), Expect(3) = e-169
Identities = 83/156 (53%), Positives = 107/156 (68%)
Frame = -2
Query: 3055 QERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQKIGQA 2876
Q RMK++ADK RT+R G+ VYLKL+PYRQ++ + +LKL +K+YGPF ++QKIGQ
Sbjct: 1320 QHRMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQL 1379
Query: 2875 AYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRTIIRN 2696
AYKLQLP +A+IH VFHVSQLK+H+G + I +LP++ DG P A L R + R
Sbjct: 1380 AYKLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRK 1439
Query: 2695 GVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP 2588
GV+V Q LI N PA+ATWED I FP FNP
Sbjct: 1440 GVAVTQWLILWQNLSPAEATWEDASVIQAMFPSFNP 1475
Score = 93.2 bits (230), Expect(3) = e-169
Identities = 43/79 (54%), Positives = 58/79 (73%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W T++F LK + ++PVLALPDF + F +E DAC +GIG VLMQ GRP+AFFSK L
Sbjct: 837 WGADQTTAFETLKHKLRTSPVLALPDFDQAFTIEADACGVGIGAVLMQGGRPIAFFSKAL 896
Query: 4313 GPRAAALSTYDKDLLAIVQ 4257
GP+AA S Y+K+ +AI++
Sbjct: 897 GPKAAGQSIYEKEAMAILE 915
Score = 328 bits (841), Expect = 3e-86
Identities = 202/632 (31%), Positives = 324/632 (51%), Gaps = 15/632 (2%)
Frame = -3
Query: 1851 KMPKLDFPRFDGDNPKS*IQKCEYYSQMHNISELHRTKMAAIHMDGKASEWYDNFCLTQD 1672
K P+L+ P F G++P +++CE + ++ +A H++G+A +W+ L
Sbjct: 94 KGPRLEIPLFSGEDPIDWLKQCEKFFEITGTPLDQWVNLAVAHLNGRALKWFGGIGLPWQ 153
Query: 1671 VIPWPYFCQSVCARFENPAQDNIVGIFNKLAQI-TTVDAYFEEFEYYKALLLGVHHDFPE 1495
VI WP +C VC RF ++ + +F + Q TTV+ Y ++FE Y L+ H E
Sbjct: 154 VIAWPQWCSMVCTRFSAASEHEAIELFQNVKQFGTTVEQYIDKFEDYVDLVKRDHPYLQE 213
Query: 1494 SYFIASFIGGLKEELRSSVLMFDPKTLLHAFSLARMQEQTLVMQ*KANKPTTKFFSHSYS 1315
Y + FIGGL+ +++ V P+ LL + A A K F +
Sbjct: 214 QYLTSCFIGGLRADIKYDVCGQKPQGLLETYWAAN-----------ARKMVGNFNRNRNQ 262
Query: 1314 NTKSIPSTSTPLKPTYIPPTPSIPQPKQIPNLPLKKLTPEQVQARKAQGLCFNCDKA*KR 1135
N PL Q + + + ++ + +K C+ C +
Sbjct: 263 N---------PLGGN---------QGRNANHRGQNRGEGDRREEKK----CWFCKEPWFP 300
Query: 1134 GHICK-KQYLCVLI----GEEAEEIYDTGGGESSH-DTEEEPSLESD------MEISLHA 991
H CK KQ + L+ G+E +E +TGG E +TEE + E++ M IS A
Sbjct: 301 RHQCKIKQAIHALLEEDDGQEDKETSNTGGDEEEKKETEESATSENESPTEELMYISQTA 360
Query: 990 LTGNISGDTIRIPGFIKKQAISILIDTGITHSFIDSALAVSLQYPIAQTGNLLVTVANGD 811
+ G DT + I + L+D+G T +F+D A+ YP+ T V VA G
Sbjct: 361 VQGTSRPDTFSVLIKINGRTAVGLVDSGSTTTFMDQDYALRNYYPLKNTDTKKVVVAGGG 420
Query: 810 KTVSSGVCSQLDWNMQGRKFCGDLRLLPLGGCDIVLGADWLKNLRDVLFNLSKLCITFKH 631
+ + + + + +QG F +LLPL G DI+LGADW+ N + +L + +
Sbjct: 421 ELKTDVMVPDISYEIQGECFTNQFKLLPLKGYDIILGADWIYNYSPISLDLKQRILGITK 480
Query: 630 KVKKITLTGIQQKSSLSKMSGSVVKNFFQKHSHGIVVQL--FSISASPANXXXXXXXXXX 457
K I L + + ++SG ++ +K + G+V+Q+ S +
Sbjct: 481 GNKVILLQDFTKPNKHFQISGKRLEKMLKKGALGMVIQVNVMSETVEEEGHVIPEDISDI 540
Query: 456 LESFTNVFSDKASLPPQRSLDHQIPLQPNSAPVNLRPYRCPYLQKSVVENLVKEMLHSGI 277
++ F V + LPP+R DH I LQ + P N+RPYR P+ QK +EN++ E++ S
Sbjct: 541 IQQFPAVLKEPKGLPPKRECDHVINLQSGAVPPNIRPYRVPHYQKEAMENIINELIESKE 600
Query: 276 IQPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDKFPIPNIEELLDELHGSKFFTK 97
IQ S +P++SP ++V+KKD +WR CVDYR+LN T+K+KFP+P IE+LLDEL+G++ F+K
Sbjct: 601 IQTSDSPYSSPAVMVRKKDGSWRMCVDYRQLNAQTVKNKFPMPIIEDLLDELNGARIFSK 660
Query: 96 IDLKPGYHQIRVSPSDIHKTAFRTHHGHFEFK 1
+DL+ GYHQIR++ D+HKTAFRTH GH+E++
Sbjct: 661 LDLRSGYHQIRMAEKDVHKTAFRTHLGHYEYQ 692
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 429 bits (1104), Expect(3) = e-166
Identities = 208/394 (52%), Positives = 267/394 (67%), Gaps = 2/394 (0%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+ YL G +F I TD S+ Y LEQK+ T LQQKW+ KLLG+++ V+YK+G EN V DA
Sbjct: 911 KWRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVADA 970
Query: 4068 LSRRPHVAASCNFISLSQPV--WAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRV 3895
LSR+ +++ P W +++ Y+ D K Q++I L + + + +
Sbjct: 971 LSRKMEDQKEGKLYAITAPANTWLEQLRTXYAIDPKLQQIIKNLEQGSLASQNYKQRDGL 1030
Query: 3894 LRYKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVST 3715
L YKGRLYI +S R IL LH S GGHSG T RAKS FYW GM+K+V F+
Sbjct: 1031 LFYKGRLYIPASKELREQILYLLHSSPQGGHSGFHKTLHRAKSEFYWEGMRKEVRRFIKE 1090
Query: 3714 CDVCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSH 3535
CD+CQ+NK EN PAGLLQPLPIP VW IS+DFIEGLP SE SVI+VVVD+L+KY+H
Sbjct: 1091 CDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGLPNSESYSVIMVVVDRLSKYAH 1150
Query: 3534 FIGLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTA 3355
FI + HP+T + IA+ F+ +IFKLHGLP SIV+DRD FTS FW++LF+ GT L S+A
Sbjct: 1151 FIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTFTSTFWKELFKLQGTTLKFSSA 1210
Query: 3354 YHPQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYG 3175
YHPQ DGQTE VN +E YLRC G +PK W WLPLAEWWYNTN H S K+ PF+++YG
Sbjct: 1211 YHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAEWWYNTNIHASTKLSPFESVYG 1270
Query: 3174 YLPPHLAFPSTATTSVAEVESYLKQRDAMLTLLK 3073
Y PP L + TT + EVE+ LK RD ++ +L+
Sbjct: 1271 YPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILR 1304
Score = 127 bits (318), Expect(3) = e-166
Identities = 65/152 (42%), Positives = 95/152 (62%)
Frame = -2
Query: 3055 QERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQKIGQA 2876
Q+RMK +AD K T R F+ G+ VYL+LQPY+Q SV RNLKL+ ++YGP+ +++KIG
Sbjct: 1311 QDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTV 1370
Query: 2875 AYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRTIIRN 2696
AY+L+LP EA+IH VFHVS LK+ +G H L +LP D DG P L R +
Sbjct: 1371 AYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRLKKKK 1430
Query: 2695 GVSVPQLLIQ*TNSFPADATWEDVKHITHHFP 2600
+V ++L++ +A+W + + + FP
Sbjct: 1431 NHAVTEVLVKWKGLGEDEASWVEYSTLVNEFP 1462
Score = 84.0 bits (206), Expect(3) = e-166
Identities = 39/78 (50%), Positives = 57/78 (73%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W+ +A +F LK +TS PVLALPDF+ F ++ DA +G+G VLMQ+GRPLA+ S+ +
Sbjct: 829 WTESAKRAFQDLKHDVTSPPVLALPDFSIPFTIQCDASGIGVGAVLMQQGRPLAYMSQAI 888
Query: 4313 GPRAAALSTYDKDLLAIV 4260
+A LSTY+K+L+A+V
Sbjct: 889 HGKALQLSTYEKELMALV 906
Score = 415 bits (1066), Expect = e-112
Identities = 235/620 (37%), Positives = 347/620 (55%), Gaps = 7/620 (1%)
Frame = -3
Query: 1842 KLDFPRFDGDNPKS*IQKCEYYSQMHNISELHRTKMAAIHMDGKASEWYDNFCLTQDVIP 1663
+LDFP+F+G++P + + + + H + HR +A+ HM+GKA W+ + +
Sbjct: 90 RLDFPKFNGEDPNGWVYRADQFFNYHQTNPHHRVLLASFHMEGKALVWFQDIEAAGGISS 149
Query: 1662 WPYFCQSVCARFENPAQDNIVGIFNKLAQITTVDAYFEEFEYYKALLLGVHHDFPESYFI 1483
W F +++ RF + ++ + +L Q +TV+ Y +FE L G+ ESY +
Sbjct: 150 WEGFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLRGL----AESYKL 205
Query: 1482 ASFIGGLKEELRSSVLMFDPKTLLHAFSLARMQEQTLVMQ*KANKPTTKFFSHSYSNTKS 1303
+ F+ GL+E +R V M +P L AF LA+MQE+ + A + T K
Sbjct: 206 SCFLSGLRENIRFMVRMLNPSNLHIAFGLAKMQEENVA----ALRRTAKL---------- 251
Query: 1302 IPSTSTPLKPTYIPPTPSIPQPKQIPNLPLKKLTPEQVQARKAQGLCFNCDKA*KRGHIC 1123
S P + PP+P P++ +P+++L+P Q++ R+ +GLC+NCD GH C
Sbjct: 252 ---GSVPTRLAIGPPSP----PEKRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKC 304
Query: 1122 KKQYLCVLIGEEAEEIY----DTGGGESSHDTEEEPSLESDMEISLHALTGNISGDTIRI 955
K L ++ +E+ + + G +S EE P +E + IS+HAL G+ + T+R
Sbjct: 305 KSARLFIMECDESSDDEVPKSEVAEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRF 364
Query: 954 PGFIKKQAISILIDTGITHSFIDSALAVSLQYPIAQTGNLLVTVANGDKTVSSGVCSQLD 775
G I +A+ IL+DTG TH+F+D ++ P T L V VANG S G C+ +
Sbjct: 365 LGHICGRAVVILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAVP 424
Query: 774 WNMQGRKFCGDLRLLPLGGCDIVLGADWLKNLRDVLFNLSKLCITFKHKVKKITLTGIQQ 595
+MQG + D +L LGGCDIVLG WL+ L +L++ S+L + F K L G+
Sbjct: 425 LHMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFSVWDKPRKLQGMSP 484
Query: 594 KSSLSKMSGSVVKNFFQKHSHGIVVQLFSISASPA---NXXXXXXXXXXLESFTNVFSDK 424
+ +S + G +++ G+V+QL S L + VFS+
Sbjct: 485 -TGISLVEGEKFGKVSRQNKRGLVIQLIDFENSSLLSIETSAEPLIYDLLNLYPEVFSEP 543
Query: 423 ASLPPQRSLDHQIPLQPNSAPVNLRPYRCPYLQKSVVENLVKEMLHSGIIQPSHNPFTSP 244
LPP R+ DH I L + PV + PYR PY QKS +EN+V EML SGI++P +PF+SP
Sbjct: 544 KGLPPTRNHDHHIVLHSGAKPVCVGPYRYPYFQKSEIENIVHEMLQSGIVRPGQSPFSSP 603
Query: 243 ILLVKKKDNTWRFCVDYRRLNNITIKDKFPIPNIEELLDELHGSKFFTKIDLKPGYHQIR 64
+LLV+K D +WR CVDYR LN TIK KFPIP ++ELLDELHGS F+K+DL+ GYHQIR
Sbjct: 604 VLLVRKHDGSWRLCVDYRALNKETIKVKFPIPIVDELLDELHGSTIFSKLDLRSGYHQIR 663
Query: 63 VSPSDIHKTAFRTHHGHFEF 4
V P DI KTAFRTH GH+EF
Sbjct: 664 VHPEDIPKTAFRTHEGHYEF 683
>ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648418 [Zea mays]
Length = 1853
Score = 401 bits (1031), Expect(3) = e-159
Identities = 196/392 (50%), Positives = 258/392 (65%)
Frame = -3
Query: 4245 WKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDAL 4066
W+HYLQ F I TDH+++ + Q + + LQ+K + KL+G +KV YK+G +N V DAL
Sbjct: 1053 WRHYLQRSEFEIRTDHKALSFLGSQDLHSELQRKAMAKLMGLQFKVVYKQGKDNKVADAL 1112
Query: 4065 SRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLRY 3886
SR V A +S QP+W QEV SY D AQ ++ +L + + +S + V+R
Sbjct: 1113 SRVGAVMA-LTAVSEVQPLWIQEVTNSYVTDPAAQSLLARLCVHNPDEHGYSLSQGVIRK 1171
Query: 3885 KGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCDV 3706
G +++G ++ R+ +++++H SA GGHSG+ ATY R K F W GMK DV FV C +
Sbjct: 1172 GGLIWVGQNSALRTKLVAAVHDSAAGGHSGMHATYHRLKKLFVWKGMKSDVADFVQQCQI 1231
Query: 3705 CQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFIG 3526
CQ+ KGE PAGLL PLPIP WQ I+MDFIE LP S ILVVVD+ TKY+HFI
Sbjct: 1232 CQQAKGERVHPAGLLHPLPIPQGAWQDITMDFIEKLPQSGGCDTILVVVDRFTKYAHFIA 1291
Query: 3525 LHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYHP 3346
L HPFT + +A+ + + +LHGLP SIVSDRDKIFTS FW LF+ LGT+L+LSTAYHP
Sbjct: 1292 LKHPFTASQVAQVILDQVVRLHGLPKSIVSDRDKIFTSAFWTQLFKILGTKLNLSTAYHP 1351
Query: 3345 QIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYLP 3166
Q DGQ+ERVN +E YLRC QP KW TWL LAE+WYNT+YHTSL PF+ +YGY P
Sbjct: 1352 QTDGQSERVNQCVEMYLRCAVHAQPTKWKTWLSLAEFWYNTSYHTSLACSPFKVLYGYDP 1411
Query: 3165 PHLAFPSTATTSVAEVESYLKQRDAMLTLLKD 3070
P A PS + + A+V L +R +L++
Sbjct: 1412 PFAAAPSVPSDTAADVAQVLVERAQFTAMLRE 1443
Score = 117 bits (293), Expect(3) = e-159
Identities = 74/180 (41%), Positives = 98/180 (54%), Gaps = 7/180 (3%)
Frame = -2
Query: 3055 QERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQKIGQA 2876
Q RMK AD+ RTDR F G+ V LKLQPY Q SV KLA K++GP+ IV+++G
Sbjct: 1449 QNRMKLRADRLRTDRQFQVGDMVLLKLQPYAQHSVVSRPCPKLAFKFFGPYKIVERVGAV 1508
Query: 2875 AYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRTIIRN 2696
AY+L+LP A++H VFHVSQLK I + +LP + V P LD R + +
Sbjct: 1509 AYRLELPASAQVHPVFHVSQLKPFIPDYTPVFSNLPAYSDLSSRNVQPLEILDRRLVKKG 1568
Query: 2695 GVSVPQLLIQ*TNSFPADA-TWEDVKHITHHFPKFNP*GQGSAD------EEGCCHIPSP 2537
+VPQ+LI+ + P DA TWED + +P GQ S + CH SP
Sbjct: 1569 NRAVPQVLIR-WSLLPDDATTWEDYNVLRQRYPNAIAWGQASLEGGANVTAGSSCHGGSP 1627
Score = 96.3 bits (238), Expect(3) = e-159
Identities = 44/78 (56%), Positives = 59/78 (75%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W+ A +F +LK+AM STPVLALPDF F++ETDACD G+G VLMQ GRP+AF SK L
Sbjct: 970 WTSEAEMAFQRLKQAMVSTPVLALPDFNIPFVVETDACDDGVGAVLMQRGRPIAFLSKAL 1029
Query: 4313 GPRAAALSTYDKDLLAIV 4260
G ++ LS Y+K+ +A++
Sbjct: 1030 GIKSQKLSIYEKEFIALI 1047
Score = 332 bits (852), Expect = 1e-87
Identities = 200/637 (31%), Positives = 331/637 (51%), Gaps = 10/637 (1%)
Frame = -3
Query: 1881 SGGRDSNQFH----KMPKLDFPRFDGDNPKS*IQKCEYYSQMHNISELHRTKMAAIHMDG 1714
+GGR F +P++ FP+F+G+ P+ I +C Y ++ + E A+++M+G
Sbjct: 212 TGGRRVKDFEGGHLPIPRMPFPKFEGEEPRIWIDQCVDYFTLYRVPESVWVMSASLNMEG 271
Query: 1713 KASEWYDNFCLTQDVIPWPYFCQSVCARFENPAQDNIVGIFNKLAQITTVDAYFEEFEYY 1534
A W+ F + W FC +V +FE+ + + Q +V+ Y + F+
Sbjct: 272 NAKRWFQIFKIQYGPCSWEEFCDAVLLKFESEEYSQAMQSLLDIRQSGSVEEYKKLFDEA 331
Query: 1533 KALLLGVHHDFPESYFIASFIGGLKEELRSSVLMFDPKTLLHAFSLARMQEQTLVMQ*KA 1354
+ +HD E+ ++A FI GLK+EL+ V P ++ LAR+Q+ L Q
Sbjct: 332 RYATSVHNHDLDETLYVAHFIKGLKQELQGPVKSHMPASVERVALLARIQQGILDKQ--R 389
Query: 1353 NKPTTKFFSHSYSNTKSIPSTSTPLKPTYIPPTPSIPQPKQIPNLPLKKLTPEQV--QAR 1180
+KP + + +T +P+ ++ L +L+ E++ + R
Sbjct: 390 HKPFSTSSQGRFGST--------------------VPKADSRSSVSLPELSKERLVKEYR 429
Query: 1179 KAQGLCFNCDKA*KRGHI--CKKQYLCVLIGEEAEEIYDTGGGESSHDTE-EEPSLESDM 1009
K GLC+ C + GH C K+ L AEE+ T ++ E EE E +
Sbjct: 430 KQNGLCYTCADKFEPGHQARCPKRVQMQLSALTAEELGMTLSEQTLTQIELEEKGEEENF 489
Query: 1008 EISLHALTGNISGDTIRIPGFIKKQAISILIDTGITHSFIDSALAVSLQYPIAQTGNLLV 829
+SL+AL+G + + + + ++ Q + +L+D+G + SFI+ L + + + V
Sbjct: 490 RLSLNALSGTTNEECMAVCALLQNQVMLVLVDSGSSTSFINKQLVDRIGLTVHPCASCKV 549
Query: 828 TVANGDKTVSSGVCSQLDWNMQGRKFCGDLRLLPLGGCDIVLGADWLKNLRDVLFNLSKL 649
VANG+ S + L+W G + D+R+L LG D +LG DWL+ + +
Sbjct: 550 RVANGEIMYSDTMVRSLEWWANGHTYQNDMRVLGLGAYDAILGYDWLRRHSPMHCDWDAQ 609
Query: 648 CITFKHKVKKITLTGIQQKSSL-SKMSGSVVKNFFQKHSHGIVVQLFSISASPANXXXXX 472
I+F K ++ L G K + ++S V+ + + + + L ++A+ +N
Sbjct: 610 VISFVDKGIEVQLVGNHPKQQVVQEVSSLQVERWLRGNDIWVFALLEEVTAASSNEIHTD 669
Query: 471 XXXXXLESFTNVFSDKASLPPQRSLDHQIPLQPNSAPVNLRPYRCPYLQKSVVENLVKEM 292
E F ++F LPP R DH IPL P S PVN RPY+ K+ +E V ++
Sbjct: 670 LQGLLGE-FMDIFEAPTVLPPSRPFDHHIPLLPGSIPVNARPYKYSPHHKTEIERQVADL 728
Query: 291 LHSGIIQPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDKFPIPNIEELLDELHGS 112
L SG+I PS +PF SP+LLV+KKD TWRFCVDYR+LN++TIK++FP+P +EE+LDEL G+
Sbjct: 729 LKSGLITPSVSPFASPVLLVQKKDGTWRFCVDYRKLNDMTIKNRFPMPVVEEILDELAGT 788
Query: 111 KFFTKIDLKPGYHQIRVSPSDIHKTAFRTHHGHFEFK 1
+ F+ +D+ GYHQIR+ S+ KTAF+TH GH++F+
Sbjct: 789 EIFSSLDMTSGYHQIRMGVSEEFKTAFKTHQGHYQFR 825
>ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
gi|670423336|ref|XP_008652482.1| PREDICTED: transposon
Tf2-1 polyprotein isoform X1 [Zea mays]
Length = 1567
Score = 395 bits (1015), Expect(3) = e-158
Identities = 195/397 (49%), Positives = 258/397 (64%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+ YL F+I TDH+S+ + +Q ++T +Q+K + KL G + V+YKKG+EN DA
Sbjct: 988 KWRCYLSRGPFVIRTDHRSLCHLQDQTLATDMQKKAMTKLAGLQFSVQYKKGAENKAADA 1047
Query: 4068 LSRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
LSR H + IS + PVW QE+ SY DT AQ ++ +L+++ F N ++
Sbjct: 1048 LSRVAH-NMELSAISATTPVWLQEITNSYELDTHAQSLLAELAVSSPNEQGFELKNGLIY 1106
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
RL +G + ++ ++S+ H S +GGHSGIQATY R K F W G+K DV FV C
Sbjct: 1107 KNNRLVVGQNVGLQTKLISAFHASPLGGHSGIQATYQRVKKLFLWNGLKADVEQFVRQCH 1166
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
VCQ+ K E+ GLLQPLPIP WQ +SMDFIEGLP S SVILVVVD+LTKY+HF+
Sbjct: 1167 VCQQAKHEHCKYPGLLQPLPIPQSSWQDLSMDFIEGLPKSNGYSVILVVVDRLTKYAHFL 1226
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
+ HPFT + IA F + + KLHG P +IVSDRDK+FTS FWQ+LF+ GTQLHLS+AYH
Sbjct: 1227 AVKHPFTASHIAHLFFSQVVKLHGFPHTIVSDRDKVFTSTFWQELFKLSGTQLHLSSAYH 1286
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQ DGQTERVN LE +LRC + P +W WL AE WYNT+YHTS+K PF+A+YG
Sbjct: 1287 PQSDGQTERVNQCLEMFLRCAVHNSPSQWAKWLDSAELWYNTSYHTSIKCSPFKALYGVE 1346
Query: 3168 PPHLAFPSTATTSVAEVESYLKQRDAMLTLLKDAFTS 3058
P P T + + +E + L+QR L ++K S
Sbjct: 1347 PNLGCIPVTDSLNPSEAQLTLQQRQEFLEVIKTNLAS 1383
Score = 119 bits (298), Expect(3) = e-158
Identities = 71/166 (42%), Positives = 87/166 (52%)
Frame = -2
Query: 3055 QERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQKIGQA 2876
Q RMK YAD R+ R F G+ VYLKLQP+ Q SV KL+ KY+GPF IV K+G A
Sbjct: 1385 QSRMKHYADLNRSFRQFQIGDLVYLKLQPFAQVSVAYRPCAKLSFKYFGPFKIVDKVGSA 1444
Query: 2875 AYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRTIIRN 2696
AYKL LP A IH VFHVSQLK H+ + LP N P LD R + +
Sbjct: 1445 AYKLLLPESANIHPVFHVSQLKTHVPDYTPVFTELPPTAFSENVTPNPERILDRRLVKKG 1504
Query: 2695 GVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP*GQGSADEEG 2558
+V Q+LI+ A+WED + FP + G A G
Sbjct: 1505 SAAVTQILIKWEGIPVEMASWEDYTVLQSRFPNSSIWGPAGASGGG 1550
Score = 98.6 bits (244), Expect(3) = e-158
Identities = 45/78 (57%), Positives = 62/78 (79%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W P+A ++F LK AM +TPVLALP+F++ F++ETDACD GIG VL Q+G P+AF+SK L
Sbjct: 906 WPPSAQTAFEALKDAMITTPVLALPNFSETFVIETDACDTGIGAVLSQKGHPVAFYSKAL 965
Query: 4313 GPRAAALSTYDKDLLAIV 4260
G + + LSTY+K+ LAI+
Sbjct: 966 GVKNSQLSTYEKEFLAIL 983
Score = 314 bits (805), Expect = 4e-82
Identities = 212/657 (32%), Positives = 318/657 (48%), Gaps = 17/657 (2%)
Frame = -3
Query: 1920 SSSHNGGFHSNF-----HSGGRDSNQFHK---MPKLDFPRFDGDNPKS*IQKCEYYSQMH 1765
S +H+ G + F + G +S+Q H+ +PK DFP F+G+ + I CE Y ++
Sbjct: 129 SGNHSSGEEARFGQEEVNRRGIESDQHHRRTWLPKWDFPVFEGEEARVWIDNCEAYFLLY 188
Query: 1764 NISELHRTKMAAIHMDGKASEWYDNFCLTQDVIPWPYFCQSVCARFENPAQDNIVGIFNK 1585
I E R A++H+ G+A+ WY +F + + W F + F+ + +
Sbjct: 189 QIPEEFRVSAASLHLKGRAAHWYQSFRDSVGFVDWIQFKLEIRNEFDLTTHSDRMLELLT 248
Query: 1584 LAQITTVDAYFEEFEYYKALLLGVHHDFPESYFIASFIGGLKEELRSSVLMFDPKTLLHA 1405
L Q TV Y +FE + E++ + F+ GLK EL+ V M PKT+ A
Sbjct: 249 LRQTGTVLEYKTQFEKLVYCIRLFDKAVSETFLVTQFVLGLKHELKVGVEMQFPKTVAMA 308
Query: 1404 FSLARMQEQTLVMQ*KANKPTTKFFSHSYSNTKSIPSTSTPLKPTYIPPTPSIPQPKQIP 1225
LA H +++ T + +PP +
Sbjct: 309 AQLA--------------------LKHESLHSRHTAGTRKAVGVKGVPPVGFKEGTESQG 348
Query: 1224 NLPLKKLTPEQVQARKAQGLCFNCDKA*KRGHICKKQYLCVLIGEEAEEIYDTGGGESSH 1045
L K + R+A GLCF C + GH CK +L EE D G S
Sbjct: 349 ELWKAKQLKDY---RRANGLCFKCGEKYMPGHKCKVPVQPLLNCISLEEGGDGGPLLSDE 405
Query: 1044 -----DTEEEPSLESDMEISLHALTGNISGDTIRIPGFIKKQAISILIDTGITHSFIDSA 880
+T + S + M +SL+A++G + +RI IK Q I L+D+G +++FI
Sbjct: 406 LLDYLETNGDKSYDG-MTVSLNAMSGTNNPRCVRIQALIKDQLILQLLDSGSSNTFISEL 464
Query: 879 LAVSLQYPIAQTGNLLVTVANGDKTVSSGVCSQLDWNMQGRKFCGDLRLLPLGGCDIVLG 700
+ + V VAN QL W G+ F D +LP D+VLG
Sbjct: 465 ACSRIGCETQNIEPVAVKVANEQIIYCQKKVVQLKWWCGGKTFTVDAFVLPATAYDMVLG 524
Query: 699 ADWLKNLRDVLFNLSKLCITFKHKVKKITLTGIQQKSS--LSKMSGSVVKNFFQKHSHGI 526
DWL+ +L + + + F ++ +I L G+ KS+ L + S ++ + + +
Sbjct: 525 MDWLEKFSPMLCDWDRKWVEFSYEGVRIRLQGVGNKSAALLPEASHEQIQRWHKGNEIWA 584
Query: 525 VVQLFSISAS--PANXXXXXXXXXXLESFTNVFSDKASLPPQRSLDHQIPLQPNSAPVNL 352
V L ++ L+ F VF SLPP R DH I L P + PVN+
Sbjct: 585 VALLQQVTPELKVVTGQVPECVQEVLDQFKEVFKTPDSLPPSREYDHTISLLPGTTPVNV 644
Query: 351 RPYRCPYLQKSVVENLVKEMLHSGIIQPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNIT 172
RPYR LQK +E V+EML +G I S +PF SP+LLVKKKD +WRFCVDYR+LN+IT
Sbjct: 645 RPYRYSPLQKDEIERQVQEMLQAGTITRSVSPFASPVLLVKKKDGSWRFCVDYRKLNDIT 704
Query: 171 IKDKFPIPNIEELLDELHGSKFFTKIDLKPGYHQIRVSPSDIHKTAFRTHHGHFEFK 1
+K+KFP+P I+E +DEL G+K F+K+D+ G+HQIR++ D KTAF+THHGHF+F+
Sbjct: 705 VKNKFPMPIIDEFIDELAGAKVFSKLDMAAGFHQIRMADQDEMKTAFKTHHGHFQFR 761
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 385 bits (988), Expect(3) = e-158
Identities = 182/391 (46%), Positives = 251/391 (64%)
Frame = -3
Query: 4245 WKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDAL 4066
W+ YLQ FII TDH S+ + EQ++ T QQK KLLG YK+ Y+KG N DAL
Sbjct: 988 WRPYLQQGEFIILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQYKICYRKGVSNAAADAL 1047
Query: 4065 SRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLRY 3886
SRR + IS P W QE++ Y D ++++++ +L+I+P++ + +L+Y
Sbjct: 1048 SRRESPISEVAAISECIPSWMQELMQGYQLDGQSKQLLAELAISPNSRKDYQLCQGILKY 1107
Query: 3885 KGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCDV 3706
KG++++G++ + +++ LH + +GGHSG TY + KS F WPGMKK + + +C V
Sbjct: 1108 KGKIWVGNNTALQHKLVNELHATPLGGHSGFPVTYRKVKSLFAWPGMKKLIKEQLQSCQV 1167
Query: 3705 CQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFIG 3526
C + K + GLLQPLP+P WQ IS+DFIEGLP S + ILVVVDK +KYSHFI
Sbjct: 1168 CLQAKPDRARYPGLLQPLPVPAGAWQTISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIP 1227
Query: 3525 LHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYHP 3346
L HPF +A+EF+ +I+KLHGLP +I+SDRDKIFTS FW LF GT LH+S+AYHP
Sbjct: 1228 LSHPFNAGGVAQEFMKNIYKLHGLPRAIISDRDKIFTSQFWDQLFSKFGTDLHMSSAYHP 1287
Query: 3345 QIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYLP 3166
Q DGQTERVN LE YLRC P KW +WL LAE+WYNT++H++L PF+ +YGY P
Sbjct: 1288 QSDGQTERVNQCLEIYLRCFVHAAPHKWSSWLYLAEFWYNTSFHSTLNKTPFEVLYGYTP 1347
Query: 3165 PHLAFPSTATTSVAEVESYLKQRDAMLTLLK 3073
H +A++ + +R M LL+
Sbjct: 1348 SHFGI-GLDDCQIADLHEWHTERKFMQQLLQ 1377
Score = 130 bits (328), Expect(3) = e-158
Identities = 79/193 (40%), Positives = 107/193 (55%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L + Q++MK ADKKR+ R F+ G+ VYLKLQPY QT V KLA +YYGPF ++ +
Sbjct: 1380 LNRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQTFVAQRACHKLAFRYYGPFQVMSR 1439
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
+G AY +QLP + IH VFHVSQLK +G + + LP T L +P LD R
Sbjct: 1440 VGTVAYHIQLPATSSIHPVFHVSQLKAAVGFSKKVQDELP---TSLGALQVPFQFLDKRL 1496
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP*GQGSADEEGCCHIPSPSVA 2528
+ + SV QLL +S P+++TWED++ + FP+ GQ S + G PS
Sbjct: 1497 VKKGNRSVLQLLTHWYHSSPSESTWEDMEDLFARFPRALAWGQASFQDWGIVRPSQPSGI 1556
Query: 2527 YTMAAPISCASAL 2489
T A AL
Sbjct: 1557 TTSGRSDKSAVAL 1569
Score = 96.7 bits (239), Expect(3) = e-158
Identities = 43/78 (55%), Positives = 59/78 (75%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W+P S+F QLK+A+ + PVLALPDF+K F +ETDA D+GIG VL QE P+A+ S+ L
Sbjct: 905 WTPEIESAFQQLKQALVAAPVLALPDFSKHFTIETDASDVGIGAVLSQEKHPIAYLSRAL 964
Query: 4313 GPRAAALSTYDKDLLAIV 4260
GP+ LSTY+K+ +AI+
Sbjct: 965 GPKTRGLSTYEKEYMAII 982
Score = 351 bits (901), Expect = 3e-93
Identities = 222/668 (33%), Positives = 338/668 (50%), Gaps = 15/668 (2%)
Frame = -3
Query: 1959 KFSTQDPNRNQDASSSHNGGFHSNFHSGGRDSNQFHKMPKLDFPRFDGDNPKS*IQKCEY 1780
+F++ D +NQD + +G + G +P + P+F+GDNP+ CE
Sbjct: 116 EFASPD-QQNQDGLTFQSG-------NSGLGGGIAGSIPPMSCPQFNGDNPQLWKSNCEV 167
Query: 1779 YSQMHNISELHRTKMAAIHMDGKASEWYDNFCLTQDVIPWPYFCQSVCARFENPAQDNIV 1600
Y ++ I + K+A ++ G A+ W + W C VC RF + ++
Sbjct: 168 YFDIYGIHPQNWVKIATLNFCGNAAFWLQSVRSQLAGATWFELCDRVCGRFARDRKQALI 227
Query: 1599 GIFNKLAQITTVDAYFEEFEYYKALLLGVHHDFPESYFIASFIGGLKEELRSSVLMFDPK 1420
+ + Q ++V Y + F+ L+ +YF+ F+ GLK+ +R V++ P+
Sbjct: 228 RQWIHITQTSSVADYVDRFDSIMHQLMAYGGSNDPAYFVTKFVDGLKDHIRVVVMVQRPQ 287
Query: 1419 TLLHAFSLARMQEQTLVMQ*KANKPTTKFFSHSYSNTKSIPSTSTPLKPTYIPPTPSIPQ 1240
L A ++A +QE+ L S SN K+ +T KP++ +P+ Q
Sbjct: 288 DLDSACTVALLQEEALEGV------------QSVSNKKNETTTFLKTKPSHNLTSPTF-Q 334
Query: 1239 PKQIP--------NLPLKKLTPEQVQA----RKAQGLCFNCDKA*KRGHICKKQYLCVLI 1096
+ IP + K ++V A R+++GLCF C + R H C ++
Sbjct: 335 ARSIPFTNIEDKRGVEFSKGRDDKVSALRSYRRSKGLCFVCGEKWGRDHKCATTVQLHVV 394
Query: 1095 GEEAEEIYDTGGGESSHDTEEEPSLESD--MEISLHALTGNISGDTIRIPGFIKKQAISI 922
E + E + ++E P E D M IS AL G S +IR+ G+++ + +
Sbjct: 395 EELINALKTDP--EENCNSEGAPESEEDSLMAISFQALNGTDSSKSIRLRGWVQNTELLM 452
Query: 921 LIDTGITHSFIDSALAVSLQYPIAQTGNLLVTVANGDKTVSSGVCSQLDWNMQGRKFCGD 742
L+D+G THSFID+ L L + V VA+G + W QG F D
Sbjct: 453 LVDSGSTHSFIDAKLGAQLCGLQKLNQAIKVQVADGSQLFCDSFLPNCSWWSQGHSFTSD 512
Query: 741 LRLLPLGGCDIVLGADWLKNLRDVLFNLSKLCITFKHKVKKITLTGIQ-QKSSLSKMSGS 565
RLLPLG D +LG DWL+ + + I F+H + + L GI Q S+ +S
Sbjct: 513 FRLLPLGSYDAILGMDWLEQFSPMQVDWVHKWIAFQHHGQAVQLQGIHPQLSTCFPISND 572
Query: 564 VVKNFFQKHSHGIVVQLFSISASPANXXXXXXXXXXLESFTNVFSDKASLPPQRSLDHQI 385
++ +K + +V L A E F +FS+ LPP+R+ DH I
Sbjct: 573 QLQGMSKKGAVMCLVHLNVAETLTATTVPEIVQPILNE-FQEIFSEPTELPPKRNCDHHI 631
Query: 384 PLQPNSAPVNLRPYRCPYLQKSVVENLVKEMLHSGIIQPSHNPFTSPILLVKKKDNTWRF 205
PL + PVNLRPYR K +E V EML SG+IQPS +PF+SP LLVKKKD TWR
Sbjct: 632 PLVEGAKPVNLRPYRYKPALKDEIERQVAEMLRSGVIQPSSSPFSSPALLVKKKDGTWRL 691
Query: 204 CVDYRRLNNITIKDKFPIPNIEELLDELHGSKFFTKIDLKPGYHQIRVSPSDIHKTAFRT 25
C+DYR+LN++T+K K+P+P I+ELLDEL GSK+F+K+DL+ GYHQIR++ D +KTAF+T
Sbjct: 692 CIDYRQLNDVTVKSKYPVPVIDELLDELAGSKWFSKLDLRAGYHQIRMAEGDEYKTAFQT 751
Query: 24 HHGHFEFK 1
H GH+E+K
Sbjct: 752 HSGHYEYK 759
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 437 bits (1125), Expect(2) = e-158
Identities = 211/427 (49%), Positives = 282/427 (66%)
Frame = -3
Query: 4350 RG*TFSLLQQTSGSQGCCLVNL**RSISYCARATKWKHYLQGQHFIINTDHQSIHYFLEQ 4171
RG + +T G + + +++ +W+HY G II TD QS+ + +Q
Sbjct: 752 RGRPLAYFSRTLGVRAAAMSTYDREALAIIESLKRWRHYFLGTQLIIRTDQQSLKFMTDQ 811
Query: 4170 KISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDALSRRPHVAASCNFISLSQPVWAQEVI 3991
K++ +Q K +++LL FDY ++YKKG EN V DALSRR + S IS++ P W + V
Sbjct: 812 KVAEGIQHKLMLRLLEFDYTIEYKKGKENKVADALSRRGN---SVMAISIAVPSWIEAVT 868
Query: 3990 ASYSADTKAQEVITQLSITPHTTNPFSYANRVLRYKGRLYIGSSATTRSNILSSLHCSAV 3811
SY D +E++ QL++ P+ + ++ VLRYKGR+Y+G R NI+ SLH SAV
Sbjct: 869 NSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAV 928
Query: 3810 GGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCDVCQRNKGENTFPAGLLQPLPIPDHVW 3631
GGHSG ATY R K FYWPGMKK++ V C VCQR+K E+ GLL+PLPIPD W
Sbjct: 929 GGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAW 988
Query: 3630 QHISMDFIEGLPMSERKSVILVVVDKLTKYSHFIGLHHPFTVASIAREFITHIFKLHGLP 3451
HISMDFIEGLP S+ K VI VVVD+ TKY+H + L HP++V +A+ FI +IFKLHG P
Sbjct: 989 THISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFP 1048
Query: 3450 ASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYHPQIDGQTERVNSFLESYLRCMCGHQP 3271
+IVSDRD+IFTS WQ+LF+++ QL STAYHPQ DGQTERVN +ESYLRCM +P
Sbjct: 1049 IAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEP 1108
Query: 3270 KKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYLPPHLAFPSTATTSVAEVESYLKQRDA 3091
KKW +WLPLAEWWYNT +HT+LK+ PFQA+YG+ PP + + E +L+++
Sbjct: 1109 KKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFPPPLINEVAIPGPEDNEARDFLEEKQV 1168
Query: 3090 MLTLLKD 3070
ML LK+
Sbjct: 1169 MLRRLKE 1175
Score = 151 bits (381), Expect(2) = e-158
Identities = 77/158 (48%), Positives = 101/158 (63%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L + Q RMK YAD R++R + G+ VYLK+QPYR T+ L + LKL + +YGPF ++Q+
Sbjct: 1177 LAQAQTRMKKYADLNRSERQLTVGDMVYLKMQPYRTTAFGLKQALKLTSIFYGPFRVMQR 1236
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
+G+ AY+LQLP IH VFH+SQLKQH GAN I SP LP + DG PS ++R
Sbjct: 1237 VGKVAYRLQLPEGVGIHPVFHISQLKQHCGANSIPSPELPMVGKDGKIKTEPSLVKETRA 1296
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKF 2594
+ RN V Q L+Q N P DA+WED I FP+F
Sbjct: 1297 MPRNHTLVTQWLVQWANLPPEDASWEDASFIKSTFPEF 1334
Score = 266 bits (680), Expect = 1e-67
Identities = 166/532 (31%), Positives = 267/532 (50%), Gaps = 10/532 (1%)
Frame = -3
Query: 1569 TVDAYFEEFEYYKALLLGVHHDFPESYFIASFIGGLKEELRSSVLMFDPKTLLHAFSLAR 1390
++ Y + FE A G + PE++F+ FI GL+++++ + P+ L A+ +A+
Sbjct: 44 SISDYIDRFEELMAAYKGENPMQPEAFFVKCFINGLRQDIKHYLKPLKPQVLCEAYWMAK 103
Query: 1389 MQEQTLVMQ*KANKPTTKFFSHSYSNTKSIPSTSTPLKPTYIPPTPSIPQPKQIPNLPLK 1210
E+ A + S S NT+ + L + + Q K++ N P
Sbjct: 104 DMEKG------AGAVARRGMSSSVVNTQK-GGYNANLAKNRVQSVQNF-QKKEVGNKPNT 155
Query: 1209 KLTPEQVQARKAQGLCFNCDKA*KRGHICKKQYLCVLIGEEAEEIY--DTGGGESSHDTE 1036
P G+C C GH CK+ L+ E EE + + DT
Sbjct: 156 PFIP---------GICRYCGDKWFLGHRCKQYQQVNLMVSETEETAHPNVETEDDPPDTN 206
Query: 1035 EEPSLESD-------MEISLHALTGNISGDTIRIPGFIKKQAISILIDTGITHSFIDSAL 877
E E+D M++S A+ G T + I + L+D+G TH+F+D
Sbjct: 207 ECTVEETDPPEQLMHMQVSSQAVQGYSRFTTYTVEVKIGGRRGIALLDSGSTHTFMDLRF 266
Query: 876 AVSLQYPIAQTGNLLVTVANGDKTVSSGVCSQLDWNMQGRKFCGDLRLLPLGGCDIVLGA 697
A I + VTVA G ++ ++ +++ G+ FC ++L L D+VLG
Sbjct: 267 ATKTTCRIMCNNLMKVTVAGGGSILTGSHVPEVKYSINGQVFCNSFKILKLKNYDMVLGC 326
Query: 696 DWLKNLRDVLFNLSKLCITFKHKVKKITLTGIQQKSSLSKM-SGSVVKNFFQKHSHGIVV 520
DW+ + +L +T K + Q S +++ + ++ K G V+
Sbjct: 327 DWMYQHSPINIDLKTRRLTIMKDGKLAMILDDQSVSETARLLESNELEKLTGKGIMGYVI 386
Query: 519 QLFSISASPANXXXXXXXXXXLESFTNVFSDKASLPPQRSLDHQIPLQPNSAPVNLRPYR 340
+L S+ N ++++ ++F + LPP+R DH IP++ NS P N+RPYR
Sbjct: 387 ELQSLKGEERNNTVNTLYQNLIQTYMDIFKEPTDLPPERGCDHSIPIKDNSVPPNIRPYR 446
Query: 339 CPYLQKSVVENLVKEMLHSGIIQPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDK 160
P+ QK+ +E ++ +L S II+PS +P+ SP +LVKKKD +WR C+DYR LN TIK+K
Sbjct: 447 VPHRQKNEMEQQIQNLLESSIIRPSTSPYASPAILVKKKDGSWRLCIDYRELNAQTIKNK 506
Query: 159 FPIPNIEELLDELHGSKFFTKIDLKPGYHQIRVSPSDIHKTAFRTHHGHFEF 4
+PIP IE+LLDEL G+K F+K+DL+ GYHQIR++ DI KTAF T+ GH+E+
Sbjct: 507 YPIPVIEDLLDELFGAKVFSKLDLRSGYHQIRMNREDICKTAFNTYLGHYEY 558
Score = 100 bits (248), Expect = 2e-17
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W +F++LK AMT+ PVLALPDF++ F LETDA GIG VLMQ GRPLA+FS+ L
Sbjct: 704 WKDPQDEAFVKLKLAMTTAPVLALPDFSENFTLETDASGTGIGGVLMQRGRPLAYFSRTL 763
Query: 4313 GPRAAALSTYDKDLLAIVQ 4257
G RAAA+STYD++ LAI++
Sbjct: 764 GVRAAAMSTYDREALAIIE 782
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 394 bits (1011), Expect(3) = e-157
Identities = 183/392 (46%), Positives = 255/392 (65%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
+W+ YLQ FII TDH+S+ EQ++ T QQK KL G YK+ Y+KG +N DA
Sbjct: 989 QWRSYLQLAEFIIYTDHRSLAQLNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGAADA 1048
Query: 4068 LSRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
LSR+ + C IS S P W QEV+ Y D +++++ QL + PFS ++R
Sbjct: 1049 LSRKVQEDSHCCAISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIR 1108
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
+K R+++G + + +L ++H +AVGGHSG ATY + K FYWPGM+ DVL +V +C
Sbjct: 1109 HKNRIWLGGNLQLQQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCT 1168
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
VCQ++K + GLLQPL +P W IS+DFIEGLP S + ILVVVDK +KY HF+
Sbjct: 1169 VCQQSKPDRAKYPGLLQPLEVPPQAWHTISLDFIEGLPRSAHYNCILVVVDKFSKYGHFL 1228
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
L HPFT A +AR F+ +++KLHGLP +I+SDRD+IFTS+FWQ LFQ GT L +S++YH
Sbjct: 1229 PLLHPFTAAKVARVFLDNVYKLHGLPVNIISDRDRIFTSSFWQQLFQITGTNLSMSSSYH 1288
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQ DGQTER+N LE++LRC P +W WL +AE+WYNT H++L PF+ +YG+
Sbjct: 1289 PQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAEYWYNTTVHSTLGRTPFEVLYGHT 1348
Query: 3168 PPHLAFPSTATTSVAEVESYLKQRDAMLTLLK 3073
P H E+E++LK+R+ M ++K
Sbjct: 1349 PRHFGILVDTVVPQPELETWLKERELMTKVIK 1380
Score = 130 bits (327), Expect(3) = e-157
Identities = 71/157 (45%), Positives = 98/157 (62%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L++ Q+RMK ADK+R++RVFS G+ VYLKLQPY Q+SV N KL+ K++GPF I +
Sbjct: 1383 LHRAQDRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSVATRSNHKLSFKFFGPFQITDR 1442
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
+G AY+L LP + IH +FHVSQLK+ IG + SP LP D + +P+ L R
Sbjct: 1443 LGSVAYRLALPASSSIHPIFHVSQLKRVIGRDQRASPQLP---QDVGPIQVPTRILQRRF 1499
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPK 2597
I R G + Q+ + + ATWEDV+ + FPK
Sbjct: 1500 IDRGGELIAQVKVVWSGMTEDLATWEDVEALRARFPK 1536
Score = 85.9 bits (211), Expect(3) = e-157
Identities = 40/78 (51%), Positives = 55/78 (70%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W+ + +F LK+A+ + PVLALPDF++ F + TDA G+G VLMQ G PLAF SK L
Sbjct: 907 WTVDHSKAFEVLKQALVTAPVLALPDFSQPFCIHTDASYYGVGAVLMQSGHPLAFLSKAL 966
Query: 4313 GPRAAALSTYDKDLLAIV 4260
GP+ LSTY+K+ +AI+
Sbjct: 967 GPKNQGLSTYEKEYMAII 984
Score = 322 bits (826), Expect = 2e-84
Identities = 204/649 (31%), Positives = 331/649 (51%), Gaps = 1/649 (0%)
Frame = -3
Query: 1944 DPNRNQDASSSHNGGFHSNFHSGGRDSNQFHKMPKLDFPRFDGDNPKS*IQKCEYYSQMH 1765
DP + + NGG H F G + +P+++FP+FDGDNP+ CE Y M+
Sbjct: 147 DPFDDSVRHTELNGG-HEGFRCGHGN------LPRVNFPQFDGDNPQLWKTLCENYFDMY 199
Query: 1764 NISELHRTKMAAIHMDGKASEWYDNFCLTQDVIPWPYFCQSVCARFENPAQDNIVGIFNK 1585
++ ++A +H G+A+ W + ++ W FC+ + RF ++++
Sbjct: 200 DVEPYMWIRVATMHFIGRAASWLQSVGRRVCMLSWSEFCRQLQDRFGREQHESLIRQLFH 259
Query: 1584 LAQITTVDAYFEEFEYYKALLLGVHHDFPESYFIASFIGGLKEELRSSVLMFDPKTLLHA 1405
+ Q TV Y E+F L + Y+ FI GL++++++ +++ P L A
Sbjct: 260 IHQSGTVAEYVEQFSILVDHLSAYEANADPLYYTMRFIDGLRDDIKAVIMVQRPSNLDTA 319
Query: 1404 FSLARMQEQ-TLVMQ*KANKPTTKFFSHSYSNTKSIPSTSTPLKPTYIPPTPSIPQPKQI 1228
SLA +QE+ T + + ++P++ SH+ T S ST T S ++
Sbjct: 320 CSLALVQEEATTARRWRRSEPSS---SHAGPKTGVQLSASTKWTSNK-DSTQSASHSDKL 375
Query: 1227 PNLPLKKLTPEQVQARKAQGLCFNCDKA*KRGHICKKQYLCVLIGEEAEEIYDTGGGESS 1048
+L + R+A+GLC C + GH C + E + D ES
Sbjct: 376 ESLR---------RFRRAKGLCDKCAEKWNPGHKCAATAQLHAMEEVWSLLVDEEVPESD 426
Query: 1047 HDTEEEPSLESDMEISLHALTGNISGDTIRIPGFIKKQAISILIDTGITHSFIDSALAVS 868
E + + IS A TG+ T+++ G I+ + ILID+G +H+F++ L
Sbjct: 427 LSPPEPAPEQLFVTISKSAWTGSTGRQTLKLNGSIQNHPLLILIDSGSSHTFLNDQLRPH 486
Query: 867 LQYPIAQTGNLLVTVANGDKTVSSGVCSQLDWNMQGRKFCGDLRLLPLGGCDIVLGADWL 688
LQ + L V VANG Q W +Q F D+ LPL D+V+G DWL
Sbjct: 487 LQGVTSMASTLQVQVANGAMVTCHYKLLQAQWQIQNCSFTSDVSFLPLPYYDMVVGMDWL 546
Query: 687 KNLRDVLFNLSKLCITFKHKVKKITLTGIQQKSSLSKMSGSVVKNFFQKHSHGIVVQLFS 508
++ + + ++ + ++ + L G ++ + +V++ F + + S
Sbjct: 547 ESFSPMRVDWAQKWLIIPYQGSSVLLQG----NTAGVPADTVIELLFMESAS-------S 595
Query: 507 ISASPANXXXXXXXXXXLESFTNVFSDKASLPPQRSLDHQIPLQPNSAPVNLRPYRCPYL 328
+S+SP + + F++VF++ LPP R DH IPL + PV++RPYR P
Sbjct: 596 VSSSPDSHPAIQALL---QQFSSVFAEPQGLPPSRDCDHAIPLVEGAQPVSVRPYRYPPA 652
Query: 327 QKSVVENLVKEMLHSGIIQPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDKFPIP 148
K +E V+EMLH G+IQ S++ F SP+LLVKKKD TWRFCVDYR LN +T+K K+P+P
Sbjct: 653 LKDKIEKQVQEMLHQGVIQKSNSSFASPVLLVKKKDMTWRFCVDYRYLNALTLKSKYPVP 712
Query: 147 NIEELLDELHGSKFFTKIDLKPGYHQIRVSPSDIHKTAFRTHHGHFEFK 1
++L+DEL SK+F+K+DL+ GYHQI + P + +KTAF+TH GH+EF+
Sbjct: 713 VFDQLIDELAHSKWFSKLDLRAGYHQILLKPGEEYKTAFQTHVGHYEFR 761
>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 388 bits (996), Expect(3) = e-156
Identities = 184/391 (47%), Positives = 262/391 (67%), Gaps = 1/391 (0%)
Frame = -3
Query: 4245 WKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDAL 4066
W+ YLQ F+I TDH+S+ + Q++ST QQK L KLLG YK+ YKKG EN DAL
Sbjct: 2209 WRSYLQHDEFVIRTDHRSLSFLTNQRLSTPWQQKALTKLLGLRYKICYKKGLENGAADAL 2268
Query: 4065 SRRPHVAAS-CNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
SRR + IS+ P W QE+I Y +D++AQ+++ LS++ + F N +L
Sbjct: 2269 SRRQSDGLEEVSAISICLPDWLQELIDGYQSDSEAQKLLQALSVSGAGPSNFEVQNGILY 2328
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
+K R++IG + + IL++LH +AVGGHSGI TY R K F WPGM+KDV FV CD
Sbjct: 2329 FKHRIWIGHNKLLQQKILANLHTAAVGGHSGILVTYQRVKQLFSWPGMRKDVQEFVQHCD 2388
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
+CQR K E+ GLLQPL +P WQ I+MDFIEGLP S ILV+VDK +K++HF+
Sbjct: 2389 ICQRAKSEHVKYPGLLQPLEVPSQSWQVITMDFIEGLPKSASFDCILVIVDKFSKFAHFL 2448
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
L HPFT +A+ F+ HI +HGLP +IVSDRD++FTS+ W++LF+ GTQL +S++YH
Sbjct: 2449 PLKHPFTAFGVAQLFMEHIHSIHGLPQAIVSDRDRVFTSSLWKELFRRAGTQLRMSSSYH 2508
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQ DGQTERVN +E +LRC P +W WL LA++WYNT++H++L M PF+ ++G+
Sbjct: 2509 PQSDGQTERVNQCVEMFLRCFVHSCPSRWKHWLALAQYWYNTSFHSALGMTPFEVLFGHK 2568
Query: 3168 PPHLAFPSTATTSVAEVESYLKQRDAMLTLL 3076
P + +++ + ++ ++L +R+ M TL+
Sbjct: 2569 PRYFGLSTSSVDAPGDLATWLSERNDMNTLI 2599
Score = 129 bits (325), Expect(3) = e-156
Identities = 70/163 (42%), Positives = 96/163 (58%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L + Q+RMK AD KR++R F G+ V++KLQPY Q S N KL+ KYYGPF ++Q+
Sbjct: 2603 LLRAQQRMKSQADLKRSERCFVVGDWVFMKLQPYIQQSFMTRSNRKLSFKYYGPFQVLQR 2662
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
IG AY+LQLP + IH V HVSQLK+ + + + PSLP L+ D L IP LD +
Sbjct: 2663 IGSVAYRLQLPAHSLIHPVVHVSQLKKALAPSEAVQPSLPVLNPDAGHLAIPIKILDHCS 2722
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP*GQ 2579
I R + Q+LI+ + + TWE + + FP GQ
Sbjct: 2723 IRRGSKMIKQVLIRWSGVSSSADTWESLDEMQAKFPAAPAWGQ 2765
Score = 88.2 bits (217), Expect(3) = e-156
Identities = 42/71 (59%), Positives = 53/71 (74%)
Frame = -1
Query: 4472 SFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPLGPRAAAL 4293
+F+ LK A+ PVLALP+F + F++ETDA D GIG VLMQ G P+AF SK LGPR L
Sbjct: 2133 AFVALKTALIEAPVLALPNFQQPFVVETDASDKGIGAVLMQNGHPIAFLSKALGPRTQGL 2192
Query: 4292 STYDKDLLAIV 4260
STY+K+ LAI+
Sbjct: 2193 STYEKESLAIM 2203
Score = 182 bits (462), Expect = 2e-42
Identities = 152/581 (26%), Positives = 246/581 (42%), Gaps = 15/581 (2%)
Frame = -3
Query: 1941 PNRNQDASSSHNGGFHSNFHSGGRDSNQFHKMPKLDFPRFDGDNPKS*IQKCEYYSQMHN 1762
PN ++ +GG S GR N H++PKLDFP+FDG +P++ +CE+Y ++
Sbjct: 1535 PNFSEFVGREESGG------SEGRGYN--HRLPKLDFPQFDGSDPQNWRLRCEHYFGVYG 1586
Query: 1761 ISELHRTKMAAIHMDGKASEWYDNFCLTQDVIPWPYFCQSVCARFENPAQDNIVGIFNKL 1582
++A I+ G+A+ W + W FC +V +F+ +V ++L
Sbjct: 1587 THPDLWVRVATIYFIGRAASWLRSSRAHLLCGNWGVFCDTVDRKFDRNRHLQLVRQIDQL 1646
Query: 1581 AQITTVDAYFEEFEYYKALLLGVHHDFPESYFIASFIGGLKEELRSSVLMFDPKTLLHAF 1402
Q+ +V+ Y+E F+ +L S +L++DP
Sbjct: 1647 KQLGSVNEYYERFD----------------------------DLWSQLLVYDPTL----- 1673
Query: 1401 SLARMQEQTLVMQ*KANKPTTKFFSHSYSNT-KSIPSTSTPLKPTYIPPTPSIP------ 1243
T FF S K + + +K Y P P
Sbjct: 1674 ------------------STVNFFPSLVSKDGKKLGDHAARIKSAYPLPLPPPKFVHAGK 1715
Query: 1242 -QPKQIPNLPLKKLTPEQVQA----RKAQGLCFNCDKA*KRGHICKKQYLCVLIGEEAEE 1078
K+ +P + +++ A R+AQGLC+ C + H C + +E
Sbjct: 1716 GDDKRTAEVPKVANSSDKLVALKAYRRAQGLCYVCAEKWSPTHKCSGSVQLHAV----QE 1771
Query: 1077 IYDTGGGESSHDTEEEPSLESDMEISLHALTGNISGDTIRIPGFIKKQAISILIDTGITH 898
++ + S ++ S S M ISL A+ G +S T+R+ G I+ + IL+D+G +
Sbjct: 1772 LFSVLAADVSEGEQDADSTSSLMAISLQAIQGTVSAHTLRLQGSIQGFDVLILVDSGSSC 1831
Query: 897 SFIDSALAVSLQYPIAQTGNLLVTVANGDKTVSSGVCSQLDWNMQGRKFCGDLRLLPLGG 718
SF+ S + L + + V VANG + W +QG +F D +LLPL
Sbjct: 1832 SFLSSVVLPHLTGVKSLLTPVQVKVANGAVLSCTSELPAAKWEVQGHQFSTDFKLLPLDN 1891
Query: 717 CDIVLGADWLKNLRDVLFNLSKLCITFKHKVKKITLTGIQQKSSLSKMSGSVVKNFFQKH 538
D++LG DWL+ + N I F K + L G+ + L K + H
Sbjct: 1892 YDMILGMDWLEKYSPMDINWQAKTIQFGLHDKSVELKGVVPE--LDKCDLVSIHQLQLLH 1949
Query: 537 SHGIV---VQLFSISASPANXXXXXXXXXXLESFTNVFSDKASLPPQRSLDHQIPLQPNS 367
+ G V VQL + S ++ L+ F ++F++ LPP RS DH IPL +
Sbjct: 1950 NQGAVESLVQLTASDGSSSSQNVPSSIQSILDEFADIFNEPDGLPPSRSYDHTIPLIAGA 2009
Query: 366 APVNLRPYRCPYLQKSVVENLVKEMLHSGIIQPSHNPFTSP 244
PVN+RPYR QK+ +E V+EML + H +P
Sbjct: 2010 QPVNIRPYRYTPDQKNEIEKQVQEMLKKDLRSGYHQIRMAP 2050
>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 395 bits (1016), Expect(3) = e-155
Identities = 190/393 (48%), Positives = 261/393 (66%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+ YL F+I TDHQS+ + +Q + + LQ+K + KL+G YK +YK+G+EN DA
Sbjct: 970 KWRPYLLRGPFVIRTDHQSLCHLDDQLLGSELQRKAMTKLIGLQYKFQYKRGAENKSADA 1029
Query: 4068 LSRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
LSR H S IS++QPVW QEV+ SY D +AQ ++T+L+I + FS + +++
Sbjct: 1030 LSRVGHFF-SLQAISIAQPVWVQEVVNSYVVDNQAQSLLTELAIMSPNASGFSLVHGLIK 1088
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
KGR+++G+++ + I+SS H SA+GGHSG+ ATY R K F W G+K V F+ C
Sbjct: 1089 KKGRIWLGANSALHTKIISSFHDSAIGGHSGVMATYHRVKKLFVWKGLKHSVEEFIQQCV 1148
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
VCQ+ K E+ GLLQPLPIP WQ ISMDFIEGLP+S+ VILVVVD+ TKY+HF+
Sbjct: 1149 VCQKAKHEHCSSPGLLQPLPIPTGAWQDISMDFIEGLPLSKGSDVILVVVDRFTKYAHFL 1208
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
L HPFT +A +++ + L+G+P SIVSDRDKIFTS+FWQ LF+ L+L+TAYH
Sbjct: 1209 PLKHPFTAVQVADNYLSKVASLYGMPKSIVSDRDKIFTSHFWQHLFKRFAIPLNLTTAYH 1268
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQ DGQTERVN LE YLRC P KW +WLPLA++WYNT++H++LK P +A+YG
Sbjct: 1269 PQSDGQTERVNQCLEMYLRCAVASAPTKWSSWLPLAQYWYNTSFHSALKCSPHKALYGTD 1328
Query: 3168 PPHLAFPSTATTSVAEVESYLKQRDAMLTLLKD 3070
P + P+ T + + + LLK+
Sbjct: 1329 PTYGLLPAPLTDDAEQTSDDIDDSSGVSALLKE 1361
Score = 120 bits (300), Expect(3) = e-155
Identities = 69/156 (44%), Positives = 91/156 (58%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L + Q RMK +AD KRT R F G+ V LKLQPY Q SV KLA KY+GPF I+
Sbjct: 1373 LARDQNRMKQFADAKRTARSFQVGDLVLLKLQPYAQRSVIARPFPKLAFKYFGPFEILAV 1432
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
+G AY+L+LP ++ IH VFHVSQLK + + LPT +IPSA L+ R
Sbjct: 1433 VGSVAYRLKLPADSLIHPVFHVSQLKSFVPDTKPVFAQLPTAAQLDIADLIPSAVLERRL 1492
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFP 2600
+ + ++ Q+L+Q + PA ATWED + FP
Sbjct: 1493 VKKGNAAIVQVLVQWGSLPPALATWEDYDVVRTRFP 1528
Score = 87.8 bits (216), Expect(3) = e-155
Identities = 43/78 (55%), Positives = 53/78 (67%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W+ +F LK AM+STPVL LP+F K F +ETDAC GIG VL QEG P+AF+SK L
Sbjct: 888 WTEHTQKAFDSLKLAMSSTPVLVLPNFAKPFTIETDACSTGIGAVLSQEGHPVAFYSKAL 947
Query: 4313 GPRAAALSTYDKDLLAIV 4260
G LS Y+K+ LAI+
Sbjct: 948 GINNQKLSIYEKEFLAIM 965
Score = 352 bits (902), Expect = 2e-93
Identities = 224/635 (35%), Positives = 324/635 (51%), Gaps = 9/635 (1%)
Frame = -3
Query: 1878 GGRDSNQFHKMPKLDFPRFDGDNPKS*IQKCEYYSQMHNISELHRTKMAAIHMDGKASEW 1699
GG + + PK+DFPRFDG + + + CE Y + I+E + A+++M G A+ W
Sbjct: 138 GGDSAPRRQWTPKMDFPRFDGTDVRVWLDNCETYFGFYQITEGFQVSAASLNMIGDAANW 197
Query: 1698 YDNFCLTQDVIPWPYFCQSVCARFENPAQDNIVGIFNKLAQITTVDAYFEEFEYYKALLL 1519
Y + L W +V FE + + L Q +V Y +F L
Sbjct: 198 YQAWKLETGWHNWESLKTAVLNEFEVNLESVKMDELLLLTQTGSVTEYRSKFNQLVYQLR 257
Query: 1518 GVHHDFPESYFIASFIGGLKEELRSSVLMFDPKTLLHAFSLARMQEQTLVMQ*KANKPTT 1339
+++ I F+ GLK+ELRS+V P ++ A+ +A E +
Sbjct: 258 LYDPLLSDTFLIRHFLLGLKDELRSAVQAQQPTSVSQAYLVALAHESAQL---------- 307
Query: 1338 KFFSHSYSNTKSIPSTSTPLKPTYIPPTPSIPQPKQIPNLPLKKLTPEQVQA-RKAQGLC 1162
T T K Y +I ++ P + +Q++ R+AQGLC
Sbjct: 308 --------------GTGTK-KGHYKKEHVAIRGTDKLKLAPGELWKAQQLKEYRRAQGLC 352
Query: 1161 FNCDKA*KRGHICKKQYLCVL----IGEEAEEIYDTGGGESSHDTEEEPSLESD-MEISL 997
F C + GH+C KQ L + EE+E + D D + SD + +SL
Sbjct: 353 FKCGEKYAPGHVCAKQEGVQLKALHVQEESEVLSD-----EVLDAITALDVSSDSISLSL 407
Query: 996 HALTGNISGDTIRIPGFIKKQAISILIDTGITHSFIDSALAVSLQYPIAQTGNLLVTVAN 817
HA+ G T+++ ++ Q I IL+D+G THSFID+ L LQ V VAN
Sbjct: 408 HAMAGTCPSHTVQLRALVQNQVIIILVDSGSTHSFIDAGLCHRLQLSTESIQPTSVRVAN 467
Query: 816 GDKTVSSGVCSQLDWNMQGRKFCGDLRLLPLGGCDIVLGADWLKNLRDVLFNLSKLCITF 637
G+ Q W +QG +F +R+LP+GG D+VLG DWL + + + + F
Sbjct: 468 GETLCCEAKVPQFAWWVQGHEFSFPMRVLPMGGYDLVLGMDWLTQFSPMTCDWAAKQLQF 527
Query: 636 KHKVKKITLTGIQQKSSL---SKMSGSVVKNFFQKHSHGIVVQLFSISASPANXXXXXXX 466
+ ITL GIQ L S++S V + + + + + + +
Sbjct: 528 SYNGSVITLKGIQTSDELRPVSEVSAVQVMKWTKGNDIWAMAVVEPSQSVDNSASTFPEI 587
Query: 465 XXXLESFTNVFSDKASLPPQRSLDHQIPLQPNSAPVNLRPYRCPYLQKSVVENLVKEMLH 286
L+ F +VF D +LPP R LDH I L PNS PVN RPYR QK +E V ML
Sbjct: 588 QQLLQEFQSVFQDSNTLPPHRVLDHVISLLPNSVPVNARPYRYSPAQKDEIERQVSTMLS 647
Query: 285 SGIIQPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDKFPIPNIEELLDELHGSKF 106
+G+I PS +PF SP+LLVKKKDN+WRFCVDYRRLN++TIK+KFP+P ++ELLDEL G++F
Sbjct: 648 AGLISPSCSPFASPVLLVKKKDNSWRFCVDYRRLNDLTIKNKFPLPIVDELLDELAGTQF 707
Query: 105 FTKIDLKPGYHQIRVSPSDIHKTAFRTHHGHFEFK 1
F+K+DL+ GYHQIR+ SD KTAF+THHGHF+F+
Sbjct: 708 FSKLDLRSGYHQIRMQESDEFKTAFKTHHGHFQFR 742
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 392 bits (1007), Expect(3) = e-155
Identities = 187/393 (47%), Positives = 266/393 (67%), Gaps = 1/393 (0%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+HYL HFII TD +S+ Y LEQ+++T +QQ+WL KLL FDY+++Y++G EN+V DA
Sbjct: 948 KWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADA 1007
Query: 4068 LSRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
LSR +++ + +++ A Y+ D++ Q++IT L P + FS++ +LR
Sbjct: 1008 LSRVEGSEVLHMAMTVVECDLLKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILR 1067
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
K ++ + ++ ++ IL LH S VGGHSG T+ R K FYW GM KD+ ++ +C
Sbjct: 1068 RKSKIVVPANDNIKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCG 1127
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
CQ+ K + GLLQPLPIPD +W +SMDFIEGLP+S K+VI+VVVD+L+K +HFI
Sbjct: 1128 TCQQCKSDPAASPGLLQPLPIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFI 1187
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
L HP++ ++A ++ ++FKLHG P SIVSDRD +FTS FW++ F G L L++AYH
Sbjct: 1188 ALSHPYSALTVAHAYLDNVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYH 1247
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQ DGQTE VN LE+YLRCMC +P+ W WL LAE+WYNTNYH+S +M PF+ +YG +
Sbjct: 1248 PQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQV 1307
Query: 3168 PP-HLAFPSTATTSVAEVESYLKQRDAMLTLLK 3073
PP HL + + VA V L++R+ ML LK
Sbjct: 1308 PPVHLPY-LPGESKVAVVARSLQEREDMLLFLK 1339
Score = 123 bits (308), Expect(3) = e-155
Identities = 66/158 (41%), Positives = 101/158 (63%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L + Q RMK +AD+ RT+R F G+ VY+KLQPYRQ SV + N KL+ KY+GP+ I+ +
Sbjct: 1342 LMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDR 1401
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
G+ AYKL LP +++H VFHVSQLK +G N + LP++ D F +P ++ +
Sbjct: 1402 CGEVAYKLALPSYSQVHPVFHVSQLKVLVG-NVSTTVHLPSVMQD-VFEKVPEKVVERKM 1459
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKF 2594
+ R G +V ++L++ +N +ATWE + + FP+F
Sbjct: 1460 VNRQGKAVTKVLVKWSNEPLEEATWEFLFDLQKTFPEF 1497
Score = 86.3 bits (212), Expect(3) = e-155
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W+ A +F LK A+ PVL+LP F KQF++ETDAC GIG VLMQEG PLA+ S+ L
Sbjct: 866 WTAVAQQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGAVLMQEGHPLAYISRQL 925
Query: 4313 GPRAAALSTYDKDLLAIV 4260
+ LS Y+K+LLA++
Sbjct: 926 KGKQLHLSIYEKELLAVI 943
Score = 326 bits (836), Expect = 1e-85
Identities = 208/642 (32%), Positives = 327/642 (50%), Gaps = 22/642 (3%)
Frame = -3
Query: 1863 NQFHKMPKLDFPRFDGDNPKS*IQKCEYYSQMHNISELHRTKMAAIHMDGKASEWYDNFC 1684
N ++ K+DFPRFDG K + K E + + + E + KMAAIH D AS W+ +F
Sbjct: 104 NNLTRLGKIDFPRFDGTRLKEWLFKVEEFFGVDSTPEDMKVKMAAIHFDSHASTWHQSFI 163
Query: 1683 LT----QDVIPWPYFCQSVCARFENPAQDNIVGIFNKLAQITTVDAYFEEFEYYKALLLG 1516
+ + + W + + + RFE+ D + + L + + Y ++FE K +
Sbjct: 164 QSGVGLEVLYDWKGYVKLLKERFEDDCDDPMAEL-KHLQETDGIIDYHQKFELIKTRV-- 220
Query: 1515 VHHDFPESYFIASFIGGLKEELRSSVLMFDPKTLLHAFSLARMQEQTLVMQ*KANKPTTK 1336
+ E Y ++ ++ GL+ + + V MF P+T+ H L + E+ KP
Sbjct: 221 ---NLSEEYLVSVYLAGLRTDTQMHVRMFQPQTVRHCLFLGKTYEKA-----HPKKPANT 272
Query: 1335 FFSHSYSNTKSIPS-------TSTPLKPTYIPPTPSIPQPKQIPNLPLKKLTPEQVQARK 1177
++S +S P+ K + + Q P KK++ +++ R+
Sbjct: 273 ----TWSTNRSAPTGGYNKYQKEGESKTDHYGNKGNFKPVSQQP----KKMSQQEMSDRR 324
Query: 1176 AQGLCFNCDKA*KRGHICKKQYLCVLIGEEAEEIYDTGGGESSHDTEEEPSLESDMEISL 997
++GLC+ CD+ H + + + EE D + D E P +IS+
Sbjct: 325 SKGLCYFCDEKYTPEHYLVHKKTQLFRMDVDEEFEDAREELVNDDDEHMP------QISV 378
Query: 996 HALTGNISGDTIRIPGFIKKQAISILIDTGITHSFIDSALAVSLQYPIAQTGNLLVTVAN 817
+A++G T+R+ G K+ I ILID+G TH+F+D A L + G V+VA+
Sbjct: 379 NAVSGIAGYKTMRVKGTYDKKIIFILIDSGSTHNFLDPNTAAKLGCKVDTAGLTRVSVAD 438
Query: 816 GDKTVSSGVCSQLDWNMQGRKFCGDLRLLPLGGCDIVLGADWLKNLRDVLFNLSKLCITF 637
G K G + W +Q F D+ L+PL G D+VLG WL+ L + + KL + F
Sbjct: 439 GRKLRVEGKVTDFSWKLQTTTFQSDILLIPLQGIDMVLGVQWLETLGRISWEFKKLEMRF 498
Query: 636 KHKVKKITLTGIQQKS-------SLSKMSGSVVKNFF---QKHSHGIVVQLFSISASPAN 487
K +K+ L G+ S L K+ V+ Q+ S +L +I+A +
Sbjct: 499 KFNNQKVLLHGLTSGSVREVKAQKLQKLQEDQVQLAMLCVQEVSESTEGELCTINALTSE 558
Query: 486 XXXXXXXXXXLESFTNVFSDKASLPPQRSL-DHQIPLQPNSAPVNLRPYRCPYLQKSVVE 310
L + ++F + +LPP R +H+I L S PVN RPYR QK+ ++
Sbjct: 559 LGEESVVEEVLNEYPDIFIEPTALPPFREKHNHKIKLLEGSNPVNQRPYRYSIHQKNEID 618
Query: 309 NLVKEMLHSGIIQPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDKFPIPNIEELL 130
LV+++L +G +Q S +P+ SP++LVKKKD TWR CVDYR LN +T+KD FPIP IE+L+
Sbjct: 619 KLVEDLLTNGTVQASSSPYASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFPIPLIEDLM 678
Query: 129 DELHGSKFFTKIDLKPGYHQIRVSPSDIHKTAFRTHHGHFEF 4
DEL G+ F+KIDL+ GYHQ+R+ P DI KTAF+TH GHFE+
Sbjct: 679 DELGGAVIFSKIDLRAGYHQVRMDPDDIQKTAFKTHSGHFEY 720
>ref|NP_001175365.1| Os08g0123950, partial [Oryza sativa Japonica Group]
gi|255678117|dbj|BAH94093.1| Os08g0123950, partial [Oryza
sativa Japonica Group]
Length = 783
Score = 375 bits (962), Expect(3) = e-154
Identities = 183/392 (46%), Positives = 248/392 (63%), Gaps = 1/392 (0%)
Frame = -3
Query: 4245 WKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDAL 4066
W+ YLQ FII TDH S+ + +Q++ T Q K KLLG YK+ Y+KGS N DAL
Sbjct: 156 WRSYLQHVEFIILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSTNAAADAL 215
Query: 4065 SRRPHVAAS-CNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
SR+P + N IS P W EV+ SY D A +++ L++ P++ FS + VLR
Sbjct: 216 SRKPQQSEEEFNAISQCVPQWLMEVLQSYDTDPHATQLVAALTLNPNSKPHFSLQHGVLR 275
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
YKG ++IG+S + I++ +H S VGGHSG TY R K F W GMK + ++ C
Sbjct: 276 YKGNIWIGNSPDLQLKIINEMHASPVGGHSGFPVTYRRIKQLFAWNGMKSQIKETLANCQ 335
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
+C + K + + LLQPLP+P WQ IS+DFIEGLP S + ILVVVDK +KYSHFI
Sbjct: 336 ICAQAKPDRSRYPRLLQPLPVPKGAWQTISLDFIEGLPRSSHYNCILVVVDKFSKYSHFI 395
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
L HPFT +A+ F+++++KLHGLP I+SDRDKIFTS W+ LF GT+LH S+AYH
Sbjct: 396 PLRHPFTAIDVAKAFMSNVYKLHGLPQIIISDRDKIFTSQLWEQLFLRSGTKLHYSSAYH 455
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQ DGQTER N LE YL+C P KW +WL LAE+WYN +YH+++ PF+A+YGY
Sbjct: 456 PQSDGQTERGNQCLEIYLKCFVQSAPSKWPSWLHLAEYWYNNSYHSTIDRTPFEALYGYP 515
Query: 3168 PPHLAFPSTATTSVAEVESYLKQRDAMLTLLK 3073
P H S +E+ ++++ R M L++
Sbjct: 516 PRHFGI-SIRDCDNSELITWMQDRKLMQQLVQ 546
Score = 132 bits (331), Expect(3) = e-154
Identities = 79/179 (44%), Positives = 103/179 (57%), Gaps = 1/179 (0%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L++ Q++MK +ADKKR+ R F G VYLKLQPY Q+SV N KLA KY+GPF I++K
Sbjct: 549 LHRAQQQMKLFADKKRSFRQFQVGEWVYLKLQPYVQSSVAPRANHKLAFKYFGPFQILEK 608
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPT-LDTDGNFLVIPSAALDSR 2711
+G AYKLQLP + IH VFHVS LK+ G PS+ T L + + P A LD R
Sbjct: 609 LGTVAYKLQLPATSSIHPVFHVSLLKEAKG----FQPSVHTPLSPTYSAVQYPIALLDHR 664
Query: 2710 TIIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP*GQGSADEEGCCHIPSPS 2534
+ +V Q+L +++ PA ATWED+ + FP GQ EG S S
Sbjct: 665 LTKKGNHTVHQVLTHWSDTIPAQATWEDLHDLKARFPNALAWGQAKTQGEGIVRSSSDS 723
Score = 92.8 bits (229), Expect(3) = e-154
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
WS A S+F LK ++ S PVLALP+F K F++ETDA D GIG VL QE P+A+ SK L
Sbjct: 73 WSTEADSAFQALKTSLASAPVLALPNFQKTFVVETDASDYGIGAVLSQEKHPIAYISKAL 132
Query: 4313 GPRAAALSTYDKDLLAIV 4260
GPR LSTY+K+ LA++
Sbjct: 133 GPRTRGLSTYEKECLAMI 150
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 419 bits (1076), Expect(2) = e-153
Identities = 202/398 (50%), Positives = 259/398 (65%)
Frame = -3
Query: 4347 G*TFSLLQQTSGSQGCCLVNL**RSISYCARATKWKHYLQGQHFIINTDHQSIHYFLEQK 4168
G + L + G + L +++ KWKHY G II TD S+ Y EQ+
Sbjct: 282 GRPLAYLSKAIGPKAAALSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQR 341
Query: 4167 ISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDALSRRPHVAASCNFISLSQPVWAQEVIA 3988
I+ +Q K L+KLL +DYK++YKKG EN DALSR + A + + P W EV A
Sbjct: 342 ITEGVQHKLLIKLLSYDYKIEYKKGQENKAADALSRMQQLNALTTTVIV--PQWITEVAA 399
Query: 3987 SYSADTKAQEVITQLSITPHTTNPFSYANRVLRYKGRLYIGSSATTRSNILSSLHCSAVG 3808
SYS D K E+ + L I P + P++ +LRYK + +G+ T R +L S H SA+G
Sbjct: 400 SYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALG 459
Query: 3807 GHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCDVCQRNKGENTFPAGLLQPLPIPDHVWQ 3628
GHSG +ATY R K FYWPGMK V FV C VCQ+NK E+ PAGLLQPLP+P+ W
Sbjct: 460 GHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWS 519
Query: 3627 HISMDFIEGLPMSERKSVILVVVDKLTKYSHFIGLHHPFTVASIAREFITHIFKLHGLPA 3448
HI+MDF+EGLP SE K VI V+VD+ TKY+HFI L HPFT I +F+ H +KLHGLP
Sbjct: 520 HITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPT 579
Query: 3447 SIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYHPQIDGQTERVNSFLESYLRCMCGHQPK 3268
IVSDRD+IFTS+ W+++F+ G +LH S+AYHPQ DGQ+ERVN LE+YLRCM +P+
Sbjct: 580 VIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPR 639
Query: 3267 KWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYLPPHLA 3154
KW LP AEWWYNT +HTSL M P+QA++G PP LA
Sbjct: 640 KWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLA 677
Score = 155 bits (392), Expect(2) = e-153
Identities = 78/160 (48%), Positives = 102/160 (63%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L K Q RMK++AD+ R +R G+ VYLK+QPYR S+ L +LKL ++YYGPF ++++
Sbjct: 707 LVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLER 766
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
IG AYKL LPV ++IH+VFHVSQLK+H+G+ + LP +D +G L P A LD R
Sbjct: 767 IGSVAYKLLLPVTSQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRL 826
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP 2588
I RN V Q I N + ATWED IT FP F P
Sbjct: 827 IPRNNEPVVQWKIHWANLPESAATWEDAAFITKVFPSFTP 866
Score = 130 bits (328), Expect = 9e-27
Identities = 57/86 (66%), Positives = 73/86 (84%)
Frame = -3
Query: 261 NPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDKFPIPNIEELLDELHGSKFFTKIDLKP 82
+P++SP +LVKKKD TWR CVDYR+LN TIK+K+PIP IE+LLDEL G++ F+KIDL+
Sbjct: 2 SPYSSPAILVKKKDGTWRLCVDYRQLNASTIKNKYPIPVIEDLLDELQGAQIFSKIDLRS 61
Query: 81 GYHQIRVSPSDIHKTAFRTHHGHFEF 4
GYHQIR+ +D+HKTAF TH GHFE+
Sbjct: 62 GYHQIRMHAADVHKTAFSTHLGHFEY 87
Score = 91.3 bits (225), Expect = 8e-15
Identities = 44/79 (55%), Positives = 55/79 (69%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W +F +K + PVLA+PDF+ FILE DA GIG VLMQ GRPLA+ SK +
Sbjct: 233 WQEVQQQAFDAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAI 292
Query: 4313 GPRAAALSTYDKDLLAIVQ 4257
GP+AAALSTYDK+ LAI++
Sbjct: 293 GPKAAALSTYDKEALAILE 311
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 419 bits (1076), Expect(2) = e-153
Identities = 202/398 (50%), Positives = 259/398 (65%)
Frame = -3
Query: 4347 G*TFSLLQQTSGSQGCCLVNL**RSISYCARATKWKHYLQGQHFIINTDHQSIHYFLEQK 4168
G + L + G + L +++ KWKHY G II TD S+ Y EQ+
Sbjct: 61 GRPLAYLSKAIGPKAAALSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQR 120
Query: 4167 ISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDALSRRPHVAASCNFISLSQPVWAQEVIA 3988
I+ +Q K L+KLL +DYK++YKKG EN DALSR + A + + P W EV A
Sbjct: 121 ITEGVQHKLLIKLLSYDYKIEYKKGQENKAADALSRMQQLNALTTTVIV--PQWITEVAA 178
Query: 3987 SYSADTKAQEVITQLSITPHTTNPFSYANRVLRYKGRLYIGSSATTRSNILSSLHCSAVG 3808
SYS D K E+ + L I P + P++ +LRYK + +G+ T R +L S H SA+G
Sbjct: 179 SYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALG 238
Query: 3807 GHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCDVCQRNKGENTFPAGLLQPLPIPDHVWQ 3628
GHSG +ATY R K FYWPGMK V FV C VCQ+NK E+ PAGLLQPLP+P+ W
Sbjct: 239 GHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWS 298
Query: 3627 HISMDFIEGLPMSERKSVILVVVDKLTKYSHFIGLHHPFTVASIAREFITHIFKLHGLPA 3448
HI+MDF+EGLP SE K VI V+VD+ TKY+HFI L HPFT I +F+ H +KLHGLP
Sbjct: 299 HITMDFVEGLPKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPT 358
Query: 3447 SIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYHPQIDGQTERVNSFLESYLRCMCGHQPK 3268
IVSDRD+IFTS+ W+++F+ G +LH S+AYHPQ DGQ+ERVN LE+YLRCM +P+
Sbjct: 359 VIVSDRDRIFTSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPR 418
Query: 3267 KWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYLPPHLA 3154
KW LP AEWWYNT +HTSL M P+QA++G PP LA
Sbjct: 419 KWKALLPHAEWWYNTTFHTSLGMSPYQALHGIKPPLLA 456
Score = 155 bits (392), Expect(2) = e-153
Identities = 78/160 (48%), Positives = 102/160 (63%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L K Q RMK++AD+ R +R G+ VYLK+QPYR S+ L +LKL ++YYGPF ++++
Sbjct: 486 LVKAQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLER 545
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
IG AYKL LPV ++IH+VFHVSQLK+H+G+ + LP +D +G L P A LD R
Sbjct: 546 IGSVAYKLLLPVTSQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRL 605
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP 2588
I RN V Q I N + ATWED IT FP F P
Sbjct: 606 IPRNNEPVVQWKIHWANLPESAATWEDAAFITKVFPSFTP 645
Score = 91.3 bits (225), Expect = 8e-15
Identities = 44/79 (55%), Positives = 55/79 (69%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W +F +K + PVLA+PDF+ FILE DA GIG VLMQ GRPLA+ SK +
Sbjct: 12 WQEVQQQAFDAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAI 71
Query: 4313 GPRAAALSTYDKDLLAIVQ 4257
GP+AAALSTYDK+ LAI++
Sbjct: 72 GPKAAALSTYDKEALAILE 90
>gb|AAG13430.1|AC051634_11 putative plant disease resistance polyprotein [Oryza sativa Japonica
Group]
Length = 921
Score = 391 bits (1004), Expect(3) = e-153
Identities = 191/396 (48%), Positives = 259/396 (65%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+ YLQ FII TDH+S+ + ++ + T LQQK + KL+G Y +YK+G +N+V DA
Sbjct: 346 KWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIVADA 405
Query: 4068 LSRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
LSR P + C +S+ QP+W QEVI SY+ D +AQ+++ +L++ + +S ++R
Sbjct: 406 LSRMPSSSQFCA-LSVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIR 464
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
++ +++IGS+A + ++ + H SA+GGHSGI ATY + K F WPG+K DV FV C
Sbjct: 465 FQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHQIKKLFAWPGLKLDVENFVKQCQ 524
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
VCQ+ K E+ GLL PLPIP WQ ISMDFIEGLP S+ + ILVVVD+ TKY++FI
Sbjct: 525 VCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFTKYANFI 584
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
L HPFT + +A +FK HG+P SIVSDRD++FTS FW LF TQL +STAYH
Sbjct: 585 PLCHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAYH 644
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQIDGQTERVN LE YLRCM PKKW W+ LAE+WYNTNYHTSL P +A++G
Sbjct: 645 PQIDGQTERVNQCLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTSLGCSPHKALFGVD 704
Query: 3168 PPHLAFPSTATTSVAEVESYLKQRDAMLTLLKDAFT 3061
P + P ++ +V +R + L+ T
Sbjct: 705 PHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLT 740
Score = 121 bits (303), Expect(3) = e-153
Identities = 73/171 (42%), Positives = 101/171 (59%), Gaps = 1/171 (0%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L + Q RMK ADK R+DRVF+ G+ V+LKLQPY Q+SV KLA K++GPFT++++
Sbjct: 739 LTRAQLRMKNKADKGRSDRVFAVGDAVFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLER 798
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
IG AAY+L LP + +H VFHVSQLK + + + SLP+ V+P A L+ R
Sbjct: 799 IGVAAYRLDLPASSTVHPVFHVSQLKAQVPDHTPVYTSLPSPVVLDAADVVPEAILERRL 858
Query: 2707 IIRNGVSVPQLLIQ*TNSFPAD-ATWEDVKHITHHFPKFNP*GQGSADEEG 2558
+ R + Q+L++ + PAD ATWED + FP GQ G
Sbjct: 859 VKRGNAAHVQVLLK-WSLLPADHATWEDYHVVKTRFPDAPAWGQAETPAGG 908
Score = 83.2 bits (204), Expect(3) = e-153
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = -1
Query: 4484 AATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPLGPR 4305
A +F QLK AM++TPVLALP F F LETDAC G+G VL Q+G P+A++SK LGP
Sbjct: 267 ATQLAFDQLKTAMSNTPVLALPYFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPV 326
Query: 4304 AAALSTYDKDLLAIV 4260
LS Y+K+ LAI+
Sbjct: 327 NQKLSIYEKEFLAIM 341
>gb|AAP54661.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 760
Score = 391 bits (1004), Expect(3) = e-153
Identities = 191/396 (48%), Positives = 259/396 (65%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+ YLQ FII TDH+S+ + ++ + T LQQK + KL+G Y +YK+G +N+V DA
Sbjct: 185 KWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQYSFQYKRGVDNIVADA 244
Query: 4068 LSRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
LSR P + C +S+ QP+W QEVI SY+ D +AQ+++ +L++ + +S ++R
Sbjct: 245 LSRMPSSSQFCA-LSVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIR 303
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
++ +++IGS+A + ++ + H SA+GGHSGI ATY + K F WPG+K DV FV C
Sbjct: 304 FQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHQIKKLFAWPGLKLDVENFVKQCQ 363
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
VCQ+ K E+ GLL PLPIP WQ ISMDFIEGLP S+ + ILVVVD+ TKY++FI
Sbjct: 364 VCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFTKYANFI 423
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
L HPFT + +A +FK HG+P SIVSDRD++FTS FW LF TQL +STAYH
Sbjct: 424 PLCHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAYH 483
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQIDGQTERVN LE YLRCM PKKW W+ LAE+WYNTNYHTSL P +A++G
Sbjct: 484 PQIDGQTERVNQCLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTSLGCSPHKALFGVD 543
Query: 3168 PPHLAFPSTATTSVAEVESYLKQRDAMLTLLKDAFT 3061
P + P ++ +V +R + L+ T
Sbjct: 544 PHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLT 579
Score = 121 bits (303), Expect(3) = e-153
Identities = 73/171 (42%), Positives = 101/171 (59%), Gaps = 1/171 (0%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L + Q RMK ADK R+DRVF+ G+ V+LKLQPY Q+SV KLA K++GPFT++++
Sbjct: 578 LTRAQLRMKNKADKGRSDRVFAVGDAVFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLER 637
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
IG AAY+L LP + +H VFHVSQLK + + + SLP+ V+P A L+ R
Sbjct: 638 IGVAAYRLDLPASSTVHPVFHVSQLKAQVPDHTPVYTSLPSPVVLDAADVVPEAILERRL 697
Query: 2707 IIRNGVSVPQLLIQ*TNSFPAD-ATWEDVKHITHHFPKFNP*GQGSADEEG 2558
+ R + Q+L++ + PAD ATWED + FP GQ G
Sbjct: 698 VKRGNAAHVQVLLK-WSLLPADHATWEDYHVVKTRFPDAPAWGQAETPAGG 747
Score = 83.2 bits (204), Expect(3) = e-153
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = -1
Query: 4484 AATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPLGPR 4305
A +F QLK AM++TPVLALP F F LETDAC G+G VL Q+G P+A++SK LGP
Sbjct: 106 ATQLAFDQLKTAMSNTPVLALPYFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPV 165
Query: 4304 AAALSTYDKDLLAIV 4260
LS Y+K+ LAI+
Sbjct: 166 NQKLSIYEKEFLAIM 180
>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 937
Score = 382 bits (981), Expect(3) = e-152
Identities = 188/396 (47%), Positives = 253/396 (63%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
KW+ YLQ FII T H+ + + +Q + T LQQK + KL+G Y +YK+G N+V DA
Sbjct: 362 KWRCYLQRGPFIIKTYHKILCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVNNIVADA 421
Query: 4068 LSRRPHVAASCNFISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVLR 3889
LSR P + C F S+ QP+W QE+I SY+ D +AQ+++ +L++ + +S ++R
Sbjct: 422 LSRMPSSSQFCAF-SVVQPIWIQEMINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIR 480
Query: 3888 YKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTCD 3709
++ +++IGS+A + ++ + H SA+GGHSGI ATY R K F WPG+K DV FV C
Sbjct: 481 FQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRIKKLFAWPGLKLDVENFVKQCQ 540
Query: 3708 VCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHFI 3529
VCQ+ K E+ GLL PLPIP WQ ISMDFIEGLP S+ + ILVVVD+ TKY++FI
Sbjct: 541 VCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFTKYANFI 600
Query: 3528 GLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAYH 3349
L HPFT + +A +FK HG+P SIVSDRD++FTS FW LF TQL +STAYH
Sbjct: 601 PLRHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAYH 660
Query: 3348 PQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGYL 3169
PQ DGQ ERVN LE YLRCM PKKW W+ LAE+WYNTNYHT L P +A++G
Sbjct: 661 PQTDGQIERVNQCLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTYLGCSPHKALFGVD 720
Query: 3168 PPHLAFPSTATTSVAEVESYLKQRDAMLTLLKDAFT 3061
P + P ++ +V +R + L+ T
Sbjct: 721 PHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLT 756
Score = 122 bits (307), Expect(3) = e-152
Identities = 73/171 (42%), Positives = 102/171 (59%), Gaps = 1/171 (0%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L + Q RMK DK R+DRVF+ G+ V+LKLQPY Q+SV KLA K++GPFT++++
Sbjct: 755 LTRAQLRMKNKVDKGRSDRVFAVGDAVFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLER 814
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
IG AAY+L LP + +H VFHVSQLK + + + SLP+ V+P A L+ R
Sbjct: 815 IGVAAYRLDLPASSTVHPVFHVSQLKAQVPDHTPVYTSLPSQVVLDAADVVPEAILERRL 874
Query: 2707 IIRNGVSVPQLLIQ*TNSFPAD-ATWEDVKHITHHFPKFNP*GQGSADEEG 2558
+ R+ + Q+L++ +S PAD ATWED + FP GQ G
Sbjct: 875 VKRSNAAHVQVLLK-WSSLPADHATWEDYHVVKTRFPDAPAWGQAETPAGG 924
Score = 89.4 bits (220), Expect(3) = e-152
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W+ AA +F QLK AM++TP+LALP+F F LETDAC G+G VL Q+G P+A++SK L
Sbjct: 280 WTDAAQLAFDQLKTAMSNTPMLALPNFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTL 339
Query: 4313 GPRAAALSTYDKDLLAIV 4260
GP LS Y+K+ LAI+
Sbjct: 340 GPVNQKLSIYEKEFLAIM 357
Score = 166 bits (419), Expect = 2e-37
Identities = 75/117 (64%), Positives = 95/117 (81%)
Frame = -3
Query: 351 RPYRCPYLQKSVVENLVKEMLHSGIIQPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNIT 172
RPYR LQK +E VKEM+ +G+I PS +P+ SP+LLVKKKD +WRFCVDYRRLN +T
Sbjct: 19 RPYRYSPLQKDEIEKQVKEMIDAGLITPSMSPYASPVLLVKKKDGSWRFCVDYRRLNALT 78
Query: 171 IKDKFPIPNIEELLDELHGSKFFTKIDLKPGYHQIRVSPSDIHKTAFRTHHGHFEFK 1
IK KFP+P ++ELLDEL G+KFF+K+DLK GYHQIR+ +D KTAF+THHG F+F+
Sbjct: 79 IKSKFPMPVVDELLDELSGTKFFSKLDLKAGYHQIRMVETDEAKTAFKTHHGQFQFR 135
>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 1923
Score = 369 bits (946), Expect(3) = e-152
Identities = 176/393 (44%), Positives = 253/393 (64%), Gaps = 1/393 (0%)
Frame = -3
Query: 4248 KWKHYLQGQHFIINTDHQSIHYFLEQKISTTLQQKWLMKLLGFDYKVKYKKGSENLVVDA 4069
+W+ YLQ F+I TDH ++ + +Q++ T LQ K KL+G YKV Y++G+ N DA
Sbjct: 423 QWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQHKAFTKLMGLQYKVCYRRGTSNAAADA 482
Query: 4068 LSRRPHVAASCNF-ISLSQPVWAQEVIASYSADTKAQEVITQLSITPHTTNPFSYANRVL 3892
LSRR + +S QP+W V+ Y D +AQ+++T+L++ P F VL
Sbjct: 483 LSRRDEETNDQLWAVSECQPLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQGVL 542
Query: 3891 RYKGRLYIGSSATTRSNILSSLHCSAVGGHSGIQATYIRAKSYFYWPGMKKDVLLFVSTC 3712
RYKG+++IG + + + ++++LH S +GGHSG TY R K+ F WP MKK + +V C
Sbjct: 543 RYKGKIWIGHNLSLQQQLVTALHASPIGGHSGFPVTYQRVKALFAWPQMKKMIQQWVKNC 602
Query: 3711 DVCQRNKGENTFPAGLLQPLPIPDHVWQHISMDFIEGLPMSERKSVILVVVDKLTKYSHF 3532
+CQ+ K + GLLQPLPIP+ WQ +S+DFIEGLP SER + ILVVVDK ++Y+HF
Sbjct: 603 TICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFSRYAHF 662
Query: 3531 IGLHHPFTVASIAREFITHIFKLHGLPASIVSDRDKIFTSNFWQDLFQALGTQLHLSTAY 3352
+ L HPF+ +A ++ +I+KLHG+P ++SDRDKIFTS W+ LF G LHLS+AY
Sbjct: 663 VPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDRDKIFTSKLWEFLFLKSGIALHLSSAY 722
Query: 3351 HPQIDGQTERVNSFLESYLRCMCGHQPKKWHTWLPLAEWWYNTNYHTSLKMYPFQAMYGY 3172
HPQ DGQT+RVN LE +LRC P KW TWL LA +WYNT +H++L PF+ +YG+
Sbjct: 723 HPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLHLAGYWYNTCFHSALNKTPFEVLYGH 782
Query: 3171 LPPHLAFPSTATTSVAEVESYLKQRDAMLTLLK 3073
P L + T ++ ++ +L +R M LL+
Sbjct: 783 NPLQLGV-TMETCAIPDLAVWLHERKLMAELLQ 814
Score = 130 bits (327), Expect(3) = e-152
Identities = 76/174 (43%), Positives = 101/174 (58%)
Frame = -2
Query: 3067 LYKFQERMKFYADKKRTDRVFSEGNKVYLKLQPYRQTSVTLGRNLKLAAKYYGPFTIVQK 2888
L++ Q++MKF+ADK R+ R F+ G+ V+LKLQPY Q SV KLA K+YGPF I+ +
Sbjct: 817 LHRVQQKMKFHADKNRSFREFAVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILAR 876
Query: 2887 IGQAAYKLQLPVEARIHNVFHVSQLKQHIGANHILSPSLPTLDTDGNFLVIPSAALDSRT 2708
+G AYKLQLP ++ IH VFHVSQLK G H + LP V P LD R
Sbjct: 877 VGTVAYKLQLPDDSTIHPVFHVSQLKVAHGFKHQVQSRLPKFLKS---TVYPLQILDQRL 933
Query: 2707 IIRNGVSVPQLLIQ*TNSFPADATWEDVKHITHHFPKFNP*GQGSADEEGCCHI 2546
I + +V Q+L+ ++S DATWED + + FP GQ + EG I
Sbjct: 934 IRKGNRTVSQVLVYWSDSVAEDATWEDREDLQQRFPMALAWGQATFQGEGVVKI 987
Score = 94.7 bits (234), Expect(3) = e-152
Identities = 44/78 (56%), Positives = 57/78 (73%)
Frame = -1
Query: 4493 WSPAATSSFLQLKKAMTSTPVLALPDFTKQFILETDACDLGIGVVLMQEGRPLAFFSKPL 4314
W+ +F LK+A+ S PVLALPDF+K F +ETDACD+GIG VL Q+ P+AF SK L
Sbjct: 341 WTAQMDEAFNALKQALVSAPVLALPDFSKTFTVETDACDMGIGAVLSQDRHPIAFVSKAL 400
Query: 4313 GPRAAALSTYDKDLLAIV 4260
GP+ LSTY+K+ LAI+
Sbjct: 401 GPKTRGLSTYEKEYLAIL 418
Score = 189 bits (480), Expect = 2e-44
Identities = 85/151 (56%), Positives = 113/151 (74%)
Frame = -3
Query: 453 ESFTNVFSDKASLPPQRSLDHQIPLQPNSAPVNLRPYRCPYLQKSVVENLVKEMLHSGII 274
+ F VF + +PP R+ DH+IPL ++PVNLRPYR K +E V EML SG+I
Sbjct: 45 DRFQEVFQEPTEMPPVRNCDHKIPLMEGASPVNLRPYRHTPALKDEIERQVTEMLQSGVI 104
Query: 273 QPSHNPFTSPILLVKKKDNTWRFCVDYRRLNNITIKDKFPIPNIEELLDELHGSKFFTKI 94
Q S++ F+SP LLVKKKD TWR C+DY+ LN ITIK K+P+P I+ELLDEL G+K+F+K+
Sbjct: 105 QNSNSAFSSPALLVKKKDGTWRLCIDYKHLNAITIKGKYPLPVIDELLDELSGAKYFSKL 164
Query: 93 DLKPGYHQIRVSPSDIHKTAFRTHHGHFEFK 1
DL+ GYHQIR+ P + HKTAF+TH GH+E++
Sbjct: 165 DLRAGYHQIRLQPGEEHKTAFQTHSGHYEYR 195