BLASTX nr result

ID: Papaver30_contig00032883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00032883
         (504 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHF98794.1| Putative mediator of RNA polymerase II transcript...   144   3e-32
ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II tra...   140   5e-31
gb|KJB70361.1| hypothetical protein B456_011G069400 [Gossypium r...   140   5e-31
gb|KJB70360.1| hypothetical protein B456_011G069400 [Gossypium r...   140   5e-31
ref|XP_013444227.1| mediator of RNA polymerase II transcription ...   137   3e-30
ref|XP_007024367.1| RNA polymerase transcriptional regulation me...   137   3e-30
ref|XP_007024366.1| RNA polymerase transcriptional regulation me...   137   3e-30
gb|AFK47538.1| unknown [Medicago truncatula]                          137   3e-30
ref|XP_011072456.1| PREDICTED: mediator of RNA polymerase II tra...   136   7e-30
ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prun...   136   7e-30
ref|XP_010033662.1| PREDICTED: mediator of RNA polymerase II tra...   135   9e-30
ref|XP_012856290.1| PREDICTED: mediator of RNA polymerase II tra...   135   1e-29
gb|EYU21430.1| hypothetical protein MIMGU_mgv1a009886mg [Erythra...   135   1e-29
emb|CBI36012.3| unnamed protein product [Vitis vinifera]              134   2e-29
ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II tra...   134   2e-29
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   134   2e-29
ref|XP_014515802.1| PREDICTED: mediator of RNA polymerase II tra...   133   4e-29
ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phas...   133   4e-29
ref|XP_012468480.1| PREDICTED: mediator of RNA polymerase II tra...   132   8e-29
ref|XP_009401441.1| PREDICTED: mediator of RNA polymerase II tra...   132   8e-29

>gb|KHF98794.1| Putative mediator of RNA polymerase II transcription subunit 6
           [Gossypium arboreum]
          Length = 256

 Score =  144 bits (362), Expect = 3e-32
 Identities = 80/131 (61%), Positives = 90/131 (68%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFAAR+GRALY+ISKAFTTAASK EKIGYVD ENES  +E K  KE 
Sbjct: 126 LDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETSEPKGGKEA 185

Query: 324 IDFKEVKRIDHILGALQRKLQXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXXX 145
           IDFKEVKR+DHIL +LQRKL               PT+EADK P+N ++AE         
Sbjct: 186 IDFKEVKRVDHILASLQRKLPPAPPPPPFPDGFVPPTTEADKEPENQQTAEPQPPAVDPI 245

Query: 144 XXXXPTKRMKY 112
               P KRMK+
Sbjct: 246 IDQGPAKRMKF 256


>ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Gossypium raimondii] gi|763803424|gb|KJB70362.1|
           hypothetical protein B456_011G069400 [Gossypium
           raimondii] gi|763803426|gb|KJB70364.1| hypothetical
           protein B456_011G069400 [Gossypium raimondii]
          Length = 232

 Score =  140 bits (352), Expect = 5e-31
 Identities = 78/131 (59%), Positives = 89/131 (67%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFAAR+GRALY+ISKAFTTAASK EKIGY D ENES  +E K  KET
Sbjct: 102 LDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYGDTENESETSEPKGGKET 161

Query: 324 IDFKEVKRIDHILGALQRKLQXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXXX 145
           IDFKEVKR+DHIL +LQRKL               PT+EA+K P+N ++ E         
Sbjct: 162 IDFKEVKRVDHILASLQRKLPPAPPPPPFPDGFVPPTTEAEKEPENQQTTEPQPPAVDPI 221

Query: 144 XXXXPTKRMKY 112
               P KRMK+
Sbjct: 222 IDQGPAKRMKF 232


>gb|KJB70361.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
          Length = 169

 Score =  140 bits (352), Expect = 5e-31
 Identities = 78/131 (59%), Positives = 89/131 (67%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFAAR+GRALY+ISKAFTTAASK EKIGY D ENES  +E K  KET
Sbjct: 39  LDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYGDTENESETSEPKGGKET 98

Query: 324 IDFKEVKRIDHILGALQRKLQXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXXX 145
           IDFKEVKR+DHIL +LQRKL               PT+EA+K P+N ++ E         
Sbjct: 99  IDFKEVKRVDHILASLQRKLPPAPPPPPFPDGFVPPTTEAEKEPENQQTTEPQPPAVDPI 158

Query: 144 XXXXPTKRMKY 112
               P KRMK+
Sbjct: 159 IDQGPAKRMKF 169


>gb|KJB70360.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
          Length = 183

 Score =  140 bits (352), Expect = 5e-31
 Identities = 78/131 (59%), Positives = 89/131 (67%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFAAR+GRALY+ISKAFTTAASK EKIGY D ENES  +E K  KET
Sbjct: 53  LDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYGDTENESETSEPKGGKET 112

Query: 324 IDFKEVKRIDHILGALQRKLQXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXXX 145
           IDFKEVKR+DHIL +LQRKL               PT+EA+K P+N ++ E         
Sbjct: 113 IDFKEVKRVDHILASLQRKLPPAPPPPPFPDGFVPPTTEAEKEPENQQTTEPQPPAVDPI 172

Query: 144 XXXXPTKRMKY 112
               P KRMK+
Sbjct: 173 IDQGPAKRMKF 183


>ref|XP_013444227.1| mediator of RNA polymerase II transcription subunit 6 [Medicago
           truncatula] gi|657372386|gb|KEH18254.1| mediator of RNA
           polymerase II transcription subunit 6 [Medicago
           truncatula]
          Length = 248

 Score =  137 bits (345), Expect = 3e-30
 Identities = 77/132 (58%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL+NVFAARIGRALY+I KAFTTAASK EKIGYVD ENE+T  E KV KET
Sbjct: 117 LDGSIYQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKVAKET 176

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           ID KE+KR+DHIL +LQRKL                 T+E +K P+  E+AE        
Sbjct: 177 IDLKEIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAETEKGPETQEAAESLAPTVDP 236

Query: 147 XXXXXPTKRMKY 112
                P KRMK+
Sbjct: 237 ILDQGPAKRMKF 248


>ref|XP_007024367.1| RNA polymerase transcriptional regulation mediator-related isoform
           2 [Theobroma cacao] gi|508779733|gb|EOY26989.1| RNA
           polymerase transcriptional regulation mediator-related
           isoform 2 [Theobroma cacao]
          Length = 184

 Score =  137 bits (345), Expect = 3e-30
 Identities = 78/132 (59%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFAAR+GRALY+ISKAFTTAASK EKIGYVD ENES   E+K  KET
Sbjct: 53  LDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESKGGKET 112

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           IDFKEVKR+DHIL +LQRKL                 T+EA+K P+N ++ E        
Sbjct: 113 IDFKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAEAEKDPENQQAVETQPPAIDP 172

Query: 147 XXXXXPTKRMKY 112
                P KRMK+
Sbjct: 173 IIDQGPAKRMKF 184


>ref|XP_007024366.1| RNA polymerase transcriptional regulation mediator-related isoform
           1 [Theobroma cacao] gi|508779732|gb|EOY26988.1| RNA
           polymerase transcriptional regulation mediator-related
           isoform 1 [Theobroma cacao]
          Length = 257

 Score =  137 bits (345), Expect = 3e-30
 Identities = 78/132 (59%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFAAR+GRALY+ISKAFTTAASK EKIGYVD ENES   E+K  KET
Sbjct: 126 LDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESKGGKET 185

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           IDFKEVKR+DHIL +LQRKL                 T+EA+K P+N ++ E        
Sbjct: 186 IDFKEVKRVDHILASLQRKLPPAPPPPPFPEGFIPLATAEAEKDPENQQAVETQPPAIDP 245

Query: 147 XXXXXPTKRMKY 112
                P KRMK+
Sbjct: 246 IIDQGPAKRMKF 257


>gb|AFK47538.1| unknown [Medicago truncatula]
          Length = 248

 Score =  137 bits (345), Expect = 3e-30
 Identities = 77/132 (58%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL+NVFAARIGRALY+I KAFTTAASK EKIGYVD ENE+T  E KV KET
Sbjct: 117 LDGSIYQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKVAKET 176

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           ID KE+KR+DHIL +LQRKL                 T+E +K P+  E+AE        
Sbjct: 177 IDLKEIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAETEKGPETQEAAESLAPTVDP 236

Query: 147 XXXXXPTKRMKY 112
                P KRMK+
Sbjct: 237 ILDQGPAKRMKF 248


>ref|XP_011072456.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Sesamum indicum]
          Length = 254

 Score =  136 bits (342), Expect = 7e-30
 Identities = 70/109 (64%), Positives = 80/109 (73%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFA+R+GRALYHISKAF TAASK EKIGYVD ENEST +E K  KET
Sbjct: 126 LDGSIYQAPQLCNVFASRVGRALYHISKAFNTAASKLEKIGYVDAENESTSSEPKAAKET 185

Query: 324 IDFKEVKRIDHILGALQRKLQXXXXXXXXXXXXXXPTSEADKVPDNPES 178
           IDFKE+KR+DHIL +LQRKL               PT+E +K  D  ++
Sbjct: 186 IDFKELKRVDHILASLQRKLPPAPPPPPFPEGYAPPTAEGEKSSDTQQA 234


>ref|XP_007217752.1| hypothetical protein PRUPE_ppa010369mg [Prunus persica]
           gi|462413902|gb|EMJ18951.1| hypothetical protein
           PRUPE_ppa010369mg [Prunus persica]
          Length = 252

 Score =  136 bits (342), Expect = 7e-30
 Identities = 77/132 (58%), Positives = 89/132 (67%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDG+IYQAPQL NVFAARIGRALY+ISKAFTTAASK EKIGYVD ENE+   E+KV KET
Sbjct: 121 LDGTIYQAPQLCNVFAARIGRALYYISKAFTTAASKLEKIGYVDSENETAAFESKVTKET 180

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           IDFKEVKR+DHIL +LQRKL                PT+EA+  P+  ++ E        
Sbjct: 181 IDFKEVKRVDHILQSLQRKLPPAPPPPPFPEGYVPAPTAEAENGPETQQAGEPQQPQMDP 240

Query: 147 XXXXXPTKRMKY 112
                P KRMK+
Sbjct: 241 IIDQGPAKRMKF 252


>ref|XP_010033662.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Eucalyptus grandis] gi|629087004|gb|KCW53361.1|
           hypothetical protein EUGRSUZ_J02602 [Eucalyptus grandis]
          Length = 254

 Score =  135 bits (341), Expect = 9e-30
 Identities = 70/111 (63%), Positives = 86/111 (77%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGS+YQAPQL++VFAARIGRALY+ISKAFTTAASK EKIGYVDGE+ES+ +++KV KET
Sbjct: 125 LDGSVYQAPQLSSVFAARIGRALYYISKAFTTAASKLEKIGYVDGEDESSASDSKVPKET 184

Query: 324 IDFKEVKRIDHILGALQRKLQXXXXXXXXXXXXXXPTSEADKVPDNPESAE 172
           ID KEVKRIDHIL +LQR+L                T+EA+K  +  ++AE
Sbjct: 185 IDIKEVKRIDHILASLQRRLPPAPAPPPFPEGYAPSTTEAEKGAETQQAAE 235


>ref|XP_012856290.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X2 [Erythranthe guttatus]
          Length = 260

 Score =  135 bits (340), Expect = 1e-29
 Identities = 71/111 (63%), Positives = 82/111 (73%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFA+R+GRALYHISKAF TAASK EKIGYVD ENEST +E K  KET
Sbjct: 130 LDGSIYQAPQLCNVFASRVGRALYHISKAFNTAASKLEKIGYVDAENESTSSEPKAAKET 189

Query: 324 IDFKEVKRIDHILGALQRKLQXXXXXXXXXXXXXXPTSEADKVPDNPESAE 172
           IDFKE+KR+DHIL +LQRKL                ++E +K  D+ +SAE
Sbjct: 190 IDFKELKRVDHILASLQRKLPPAPPPPPFPDGYAPLSTEGEKSSDS-QSAE 239


>gb|EYU21430.1| hypothetical protein MIMGU_mgv1a009886mg [Erythranthe guttata]
          Length = 328

 Score =  135 bits (340), Expect = 1e-29
 Identities = 71/111 (63%), Positives = 82/111 (73%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFA+R+GRALYHISKAF TAASK EKIGYVD ENEST +E K  KET
Sbjct: 198 LDGSIYQAPQLCNVFASRVGRALYHISKAFNTAASKLEKIGYVDAENESTSSEPKAAKET 257

Query: 324 IDFKEVKRIDHILGALQRKLQXXXXXXXXXXXXXXPTSEADKVPDNPESAE 172
           IDFKE+KR+DHIL +LQRKL                ++E +K  D+ +SAE
Sbjct: 258 IDFKELKRVDHILASLQRKLPPAPPPPPFPDGYAPLSTEGEKSSDS-QSAE 307


>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  134 bits (338), Expect = 2e-29
 Identities = 77/132 (58%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVF ARIGRALYHISKAFTTAASK EKIGYVD ENE+   E+KV KET
Sbjct: 95  LDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKET 154

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           IDFKEV R+D IL +LQRKL                PT+E +K P+  ++AE        
Sbjct: 155 IDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDP 214

Query: 147 XXXXXPTKRMKY 112
                P+KRMK+
Sbjct: 215 IIDQGPSKRMKF 226


>ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Vitis vinifera]
          Length = 258

 Score =  134 bits (338), Expect = 2e-29
 Identities = 77/132 (58%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVF ARIGRALYHISKAFTTAASK EKIGYVD ENE+   E+KV KET
Sbjct: 127 LDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKET 186

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           IDFKEV R+D IL +LQRKL                PT+E +K P+  ++AE        
Sbjct: 187 IDFKEVMRVDQILASLQRKLPPAPPPPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDP 246

Query: 147 XXXXXPTKRMKY 112
                P+KRMK+
Sbjct: 247 IIDQGPSKRMKF 258


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  134 bits (338), Expect = 2e-29
 Identities = 77/132 (58%), Positives = 88/132 (66%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVF ARIGRALYHISKAFTTAASK EKIGYVD ENE+   E+KV KET
Sbjct: 122 LDGSIYQAPQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKET 181

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           IDFKEV R+D IL +LQRKL                PT+E +K P+  ++AE        
Sbjct: 182 IDFKEVMRVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDP 241

Query: 147 XXXXXPTKRMKY 112
                P+KRMK+
Sbjct: 242 IIDQGPSKRMKF 253


>ref|XP_014515802.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           isoform X2 [Vigna radiata var. radiata]
          Length = 248

 Score =  133 bits (335), Expect = 4e-29
 Identities = 77/132 (58%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFAARIGRALY+I KAFTTAASK EKIGYVD ENE+   E+K  KET
Sbjct: 117 LDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKET 176

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           ID KEVKR+DHIL +LQRKL                PT+EA+K  +  E+AE        
Sbjct: 177 IDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAATADP 236

Query: 147 XXXXXPTKRMKY 112
                P KRMK+
Sbjct: 237 IIDQGPAKRMKF 248


>ref|XP_007135611.1| hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
           gi|561008656|gb|ESW07605.1| hypothetical protein
           PHAVU_010G143300g [Phaseolus vulgaris]
          Length = 247

 Score =  133 bits (335), Expect = 4e-29
 Identities = 77/132 (58%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFAARIGRALY+I KAFTTAASK EKIGYVD ENE+   E+K  KET
Sbjct: 116 LDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKET 175

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           ID KEVKR+DHIL +LQRKL                PT+EA+K  +  E+AE        
Sbjct: 176 IDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAEAEKGTETQEAAETQAPTADP 235

Query: 147 XXXXXPTKRMKY 112
                P KRMK+
Sbjct: 236 IIDQGPAKRMKF 247


>ref|XP_012468480.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like isoform X1 [Gossypium raimondii]
           gi|763749598|gb|KJB17037.1| hypothetical protein
           B456_002G261900 [Gossypium raimondii]
          Length = 252

 Score =  132 bits (333), Expect = 8e-29
 Identities = 76/132 (57%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGSIYQAPQL NVFAAR+GRALY+ISKAFTTAASK EKIGYVD ENES   E K  KE 
Sbjct: 121 LDGSIYQAPQLCNVFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETVEPKGGKEA 180

Query: 324 IDFKEVKRIDHILGALQRKL-QXXXXXXXXXXXXXXPTSEADKVPDNPESAEXXXXXXXX 148
           I+ KEVKR+DHIL +LQRKL                 T+EA+K P+N ++AE        
Sbjct: 181 INIKEVKRVDHILASLQRKLPPAPLPPPFPDGFVPPSTAEAEKDPENQQTAEPQPSAVDP 240

Query: 147 XXXXXPTKRMKY 112
                P KRMK+
Sbjct: 241 IIDQGPAKRMKF 252


>ref|XP_009401441.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Musa acuminata subsp. malaccensis]
          Length = 260

 Score =  132 bits (333), Expect = 8e-29
 Identities = 67/111 (60%), Positives = 80/111 (72%)
 Frame = -1

Query: 504 LDGSIYQAPQLANVFAARIGRALYHISKAFTTAASKSEKIGYVDGENESTGTETKVVKET 325
           LDGS+YQAPQL++VFAARIGRALYHISKAF TAASK EKIGY D ENE +  E K  KET
Sbjct: 130 LDGSVYQAPQLSSVFAARIGRALYHISKAFNTAASKLEKIGYADAENEESSAELKSAKET 189

Query: 324 IDFKEVKRIDHILGALQRKLQXXXXXXXXXXXXXXPTSEADKVPDNPESAE 172
           ID KE+KR+DHIL +LQRKL                 S+A+K PD+ +++E
Sbjct: 190 IDLKELKRVDHILASLQRKLPPAPPPPPFPEGYAPSASDAEKGPDSQQASE 240


Top