BLASTX nr result
ID: Papaver30_contig00032564
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver30_contig00032564 (441 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009393407.1| PREDICTED: U6 snRNA-associated Sm-like prote... 94 5e-17 ref|XP_012066020.1| PREDICTED: sm-like protein LSM3A [Jatropha c... 94 5e-17 ref|XP_011101520.1| PREDICTED: U6 snRNA-associated Sm-like prote... 93 7e-17 ref|XP_010911978.1| PREDICTED: U6 snRNA-associated Sm-like prote... 92 1e-16 ref|XP_004961951.1| PREDICTED: sm-like protein LSM3B [Setaria it... 90 8e-16 ref|NP_177812.1| protein SM-LIKE 3B [Arabidopsis thaliana] gi|75... 89 1e-15 ref|XP_002889106.1| hypothetical protein ARALYDRAFT_895567 [Arab... 89 1e-15 ref|NP_173542.1| U6 snRNA-associated Sm-like protein [Arabidopsi... 89 2e-15 ref|XP_002893156.1| hypothetical protein ARALYDRAFT_472357 [Arab... 89 2e-15 dbj|BAE99397.1| hypothetical protein [Arabidopsis thaliana] 89 2e-15 ref|XP_010498569.1| PREDICTED: U6 snRNA-associated Sm-like prote... 87 4e-15 ref|XP_006303434.1| hypothetical protein CARUB_v10010645mg, part... 87 4e-15 ref|XP_010416610.1| PREDICTED: U6 snRNA-associated Sm-like prote... 87 6e-15 ref|XP_010416609.1| PREDICTED: U6 snRNA-associated Sm-like prote... 86 8e-15 ref|XP_009104658.1| PREDICTED: U6 snRNA-associated Sm-like prote... 86 1e-14 ref|XP_009149596.1| PREDICTED: U6 snRNA-associated Sm-like prote... 85 2e-14 ref|XP_009128202.1| PREDICTED: U6 snRNA-associated Sm-like prote... 84 5e-14 ref|XP_006390152.1| hypothetical protein EUTSA_v10019321mg [Eutr... 84 5e-14 gb|ELT90598.1| hypothetical protein CAPTEDRAFT_145207, partial [... 84 5e-14 ref|XP_005650643.1| Sm-like ribonucleo protein [Coccomyxa subell... 83 7e-14 >ref|XP_009393407.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Musa acuminata subsp. malaccensis] Length = 97 Score = 93.6 bits (231), Expect = 5e-17 Identities = 56/91 (61%), Positives = 57/91 (62%), Gaps = 29/91 (31%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 SAVKEPLDLIRLSLDERIYVK RSDREL Sbjct: 7 SAVKEPLDLIRLSLDERIYVKFRSDRELRGKLHAYDQHLNMILGDVEEIITNVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRTA 142 EIVRTT+RTVPFLFVRGDGVILVSPPLRTA Sbjct: 67 EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97 >ref|XP_012066020.1| PREDICTED: sm-like protein LSM3A [Jatropha curcas] gi|643736726|gb|KDP42997.1| hypothetical protein JCGZ_25183 [Jatropha curcas] Length = 97 Score = 93.6 bits (231), Expect = 5e-17 Identities = 56/91 (61%), Positives = 58/91 (63%), Gaps = 29/91 (31%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDREL-----------------------------XXX 235 SAVKEPLDLIRLSLDERIYVKLRS+REL Sbjct: 7 SAVKEPLDLIRLSLDERIYVKLRSERELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETY 66 Query: 234 XEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 142 EIVRTT+RTVPFLFVRGDGVILVSPPLRTA Sbjct: 67 EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97 >ref|XP_011101520.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Sesamum indicum] Length = 97 Score = 93.2 bits (230), Expect = 7e-17 Identities = 56/91 (61%), Positives = 57/91 (62%), Gaps = 29/91 (31%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDREL-----------------------------XXX 235 SAVKEPLDLIRLSLDERIYVKLR DREL Sbjct: 7 SAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLNMILGDVEEIVTTLEIDDETY 66 Query: 234 XEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 142 EIVRTT+RTVPFLFVRGDGVILVSPPLRTA Sbjct: 67 EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97 >ref|XP_010911978.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 isoform X1 [Elaeis guineensis] Length = 97 Score = 92.4 bits (228), Expect = 1e-16 Identities = 55/91 (60%), Positives = 57/91 (62%), Gaps = 29/91 (31%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 S V+EPLDLIRLSLDERIYVKLRSDREL Sbjct: 7 STVREPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVITTVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRTA 142 EIVRTT+RTVPFLFVRGDGVILVSPPLRTA Sbjct: 67 EEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97 >ref|XP_004961951.1| PREDICTED: sm-like protein LSM3B [Setaria italica] gi|944251046|gb|KQL15309.1| hypothetical protein SETIT_023775mg [Setaria italica] Length = 97 Score = 89.7 bits (221), Expect = 8e-16 Identities = 53/89 (59%), Positives = 56/89 (62%), Gaps = 29/89 (32%) Frame = -1 Query: 324 AVKEPLDLIRLSLDERIYVKLRSDRELXXXX----------------------------- 232 AVKEPLDLIRLSLDERIYVKLRS+REL Sbjct: 8 AVKEPLDLIRLSLDERIYVKLRSERELRGKLHAYDQHLNMILGDVEETVTTVEIDDETYE 67 Query: 231 EIVRTTKRTVPFLFVRGDGVILVSPPLRT 145 EIVRT+KRT+PFLFVRGDGVILVSPPLRT Sbjct: 68 EIVRTSKRTIPFLFVRGDGVILVSPPLRT 96 >ref|NP_177812.1| protein SM-LIKE 3B [Arabidopsis thaliana] gi|75268204|sp|Q9C6K5.1|LSM3B_ARATH RecName: Full=Sm-like protein LSM3B; Short=AtLSM3B; AltName: Full=U6 snRNA-associated Sm-like protein LSM3B gi|12322228|gb|AAG51149.1|AC079283_6 Sm-like protein [Arabidopsis thaliana] gi|21592388|gb|AAM64339.1| Sm-like protein [Arabidopsis thaliana] gi|98961019|gb|ABF58993.1| At1g76860 [Arabidopsis thaliana] gi|332197775|gb|AEE35896.1| U6 snRNA-associated Sm-like protein LSm3 [Arabidopsis thaliana] Length = 98 Score = 89.0 bits (219), Expect = 1e-15 Identities = 53/91 (58%), Positives = 56/91 (61%), Gaps = 29/91 (31%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLSLDERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSLDERIYVKLRSDRELRGKLHAFDQHLNMILGDVEETITTVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRTA 142 EIVRTTKRT+ FLFVRGDGVILVSPPLRTA Sbjct: 67 EEIVRTTKRTIEFLFVRGDGVILVSPPLRTA 97 >ref|XP_002889106.1| hypothetical protein ARALYDRAFT_895567 [Arabidopsis lyrata subsp. lyrata] gi|297334947|gb|EFH65365.1| hypothetical protein ARALYDRAFT_895567 [Arabidopsis lyrata subsp. lyrata] Length = 98 Score = 89.0 bits (219), Expect = 1e-15 Identities = 53/91 (58%), Positives = 56/91 (61%), Gaps = 29/91 (31%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLSLDERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSLDERIYVKLRSDRELRGKLHAFDQHLNMILGDVEETITTVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRTA 142 EIVRTTKRT+ FLFVRGDGVILVSPPLRTA Sbjct: 67 EEIVRTTKRTIEFLFVRGDGVILVSPPLRTA 97 >ref|NP_173542.1| U6 snRNA-associated Sm-like protein [Arabidopsis thaliana] gi|75264038|sp|Q9LMN4.1|LSM3A_ARATH RecName: Full=Sm-like protein LSM3A; Short=AtLSM3A; AltName: Full=U6 snRNA-associated Sm-like protein LSM3A gi|8920641|gb|AAF81363.1|AC036104_12 Contains similarity to Lsm3 protein from Homo sapiens gb|AJ238095 and contains a conserved Sm protein PF|01423 motif. EST gb|AI998441 comes from this gene [Arabidopsis thaliana] gi|12248017|gb|AAG50100.1|AF334722_1 unknown protein [Arabidopsis thaliana] gi|332191952|gb|AEE30073.1| U6 snRNA-associated Sm-like protein [Arabidopsis thaliana] Length = 97 Score = 88.6 bits (218), Expect = 2e-15 Identities = 52/90 (57%), Positives = 56/90 (62%), Gaps = 29/90 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLS++ERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSIEERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTIEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRT 145 EIVRTTKRTVPFLFVRGDGVILVSPPLRT Sbjct: 67 EEIVRTTKRTVPFLFVRGDGVILVSPPLRT 96 >ref|XP_002893156.1| hypothetical protein ARALYDRAFT_472357 [Arabidopsis lyrata subsp. lyrata] gi|297338998|gb|EFH69415.1| hypothetical protein ARALYDRAFT_472357 [Arabidopsis lyrata subsp. lyrata] Length = 98 Score = 88.6 bits (218), Expect = 2e-15 Identities = 52/90 (57%), Positives = 56/90 (62%), Gaps = 29/90 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLS++ERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSIEERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRT 145 EIVRTTKRTVPFLFVRGDGVILVSPPLRT Sbjct: 67 EEIVRTTKRTVPFLFVRGDGVILVSPPLRT 96 >dbj|BAE99397.1| hypothetical protein [Arabidopsis thaliana] Length = 96 Score = 88.6 bits (218), Expect = 2e-15 Identities = 52/90 (57%), Positives = 56/90 (62%), Gaps = 29/90 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLS++ERIYVKLRSDREL Sbjct: 6 ATVREPLDLIRLSIEERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTIEIDDETY 65 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRT 145 EIVRTTKRTVPFLFVRGDGVILVSPPLRT Sbjct: 66 EEIVRTTKRTVPFLFVRGDGVILVSPPLRT 95 >ref|XP_010498569.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Camelina sativa] gi|727574424|ref|XP_010459825.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Camelina sativa] gi|727608508|ref|XP_010477380.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Camelina sativa] Length = 97 Score = 87.4 bits (215), Expect = 4e-15 Identities = 51/90 (56%), Positives = 56/90 (62%), Gaps = 29/90 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLS++ERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSIEERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRT 145 EIVRTTKRT+PFLFVRGDGVILVSPPLRT Sbjct: 67 EEIVRTTKRTLPFLFVRGDGVILVSPPLRT 96 >ref|XP_006303434.1| hypothetical protein CARUB_v10010645mg, partial [Capsella rubella] gi|482572145|gb|EOA36332.1| hypothetical protein CARUB_v10010645mg, partial [Capsella rubella] Length = 127 Score = 87.4 bits (215), Expect = 4e-15 Identities = 51/90 (56%), Positives = 56/90 (62%), Gaps = 29/90 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLS++ERIYVKLRSDREL Sbjct: 37 ATVREPLDLIRLSIEERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTIEIDDETY 96 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRT 145 EIVRTTKRTVPFLFVRGDGVILV+PPLRT Sbjct: 97 EEIVRTTKRTVPFLFVRGDGVILVAPPLRT 126 >ref|XP_010416610.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 isoform X2 [Camelina sativa] gi|727505302|ref|XP_010428751.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Camelina sativa] gi|727597735|ref|XP_010471845.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Camelina sativa] Length = 99 Score = 86.7 bits (213), Expect = 6e-15 Identities = 51/91 (56%), Positives = 56/91 (61%), Gaps = 29/91 (31%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLSLDERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSLDERIYVKLRSDRELRGKLHAFDQHLNMILGDVEETITTVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRTA 142 EIVRTTKRT+ +LFVRGDGVILV+PPLRTA Sbjct: 67 EEIVRTTKRTIDYLFVRGDGVILVAPPLRTA 97 >ref|XP_010416609.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 isoform X1 [Camelina sativa] Length = 100 Score = 86.3 bits (212), Expect = 8e-15 Identities = 51/92 (55%), Positives = 56/92 (60%), Gaps = 30/92 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLSLDERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSLDERIYVKLRSDRELRGKLHQAFDQHLNMILGDVEETITTVEIDDET 66 Query: 231 --EIVRTTKRTVPFLFVRGDGVILVSPPLRTA 142 EIVRTTKRT+ +LFVRGDGVILV+PPLRTA Sbjct: 67 YEEIVRTTKRTIDYLFVRGDGVILVAPPLRTA 98 >ref|XP_009104658.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Brassica rapa] gi|922512277|ref|XP_013591854.1| PREDICTED: sm-like protein LSM3B [Brassica oleracea var. oleracea] gi|923664837|ref|XP_013648725.1| PREDICTED: sm-like protein LSM3B [Brassica napus] gi|923664880|ref|XP_013648739.1| PREDICTED: sm-like protein LSM3B [Brassica napus] gi|674947612|emb|CDX85975.1| BnaC06g21590D [Brassica napus] gi|674965840|emb|CDX68083.1| BnaA07g21230D [Brassica napus] Length = 97 Score = 85.5 bits (210), Expect = 1e-14 Identities = 51/90 (56%), Positives = 54/90 (60%), Gaps = 29/90 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLSLDERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSLDERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRT 145 EIVRTTKR + FLFVRGDGVILVSPPLRT Sbjct: 67 EEIVRTTKRNIQFLFVRGDGVILVSPPLRT 96 >ref|XP_009149596.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Brassica rapa] gi|923658497|ref|XP_013646844.1| PREDICTED: sm-like protein LSM3A [Brassica napus] gi|674903491|emb|CDY29472.1| BnaA06g14980D [Brassica napus] Length = 97 Score = 84.7 bits (208), Expect = 2e-14 Identities = 50/90 (55%), Positives = 55/90 (61%), Gaps = 29/90 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLS++ERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSIEERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLRT 145 EIVRT+KR VPFLFVRGDGVILVSPPLRT Sbjct: 67 EEIVRTSKRKVPFLFVRGDGVILVSPPLRT 96 >ref|XP_009128202.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3 [Brassica rapa] gi|922429427|ref|XP_013620759.1| PREDICTED: sm-like protein LSM3B [Brassica oleracea var. oleracea] gi|923529873|ref|XP_013693751.1| PREDICTED: sm-like protein LSM3B [Brassica napus] gi|923744669|ref|XP_013672298.1| PREDICTED: sm-like protein LSM3B [Brassica napus] gi|674249334|gb|KFK42099.1| hypothetical protein AALP_AA2G210600 [Arabis alpina] gi|674886663|emb|CDY45952.1| BnaA02g17780D [Brassica napus] gi|674919686|emb|CDY13566.1| BnaC02g23770D [Brassica napus] Length = 97 Score = 83.6 bits (205), Expect = 5e-14 Identities = 50/89 (56%), Positives = 53/89 (59%), Gaps = 29/89 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLSLDERIYVKLRSDREL Sbjct: 7 ATVREPLDLIRLSLDERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTVEIDDETY 66 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLR 148 EIVRTTKR + FLFVRGDGVILVSPPLR Sbjct: 67 EEIVRTTKRNIQFLFVRGDGVILVSPPLR 95 >ref|XP_006390152.1| hypothetical protein EUTSA_v10019321mg [Eutrema salsugineum] gi|557086586|gb|ESQ27438.1| hypothetical protein EUTSA_v10019321mg [Eutrema salsugineum] Length = 125 Score = 83.6 bits (205), Expect = 5e-14 Identities = 50/89 (56%), Positives = 53/89 (59%), Gaps = 29/89 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + V+EPLDLIRLSLDERIYVKLRSDREL Sbjct: 35 ATVREPLDLIRLSLDERIYVKLRSDRELRGKLHAFDQHLNMILGDVEEVITTVEIDDETY 94 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLR 148 EIVRTTKR + FLFVRGDGVILVSPPLR Sbjct: 95 EEIVRTTKRNIQFLFVRGDGVILVSPPLR 123 >gb|ELT90598.1| hypothetical protein CAPTEDRAFT_145207, partial [Capitella teleta] Length = 70 Score = 83.6 bits (205), Expect = 5e-14 Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 2/63 (3%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXXEIVRT--TKRTVPFLFVRGDGVILVSPP 154 + V+EPLDL+RLSLDERIYVK+R+DREL + + TKR +P LFVRGDGVILVSPP Sbjct: 6 TTVEEPLDLVRLSLDERIYVKMRNDRELRGRLHVSNSLNTKRIIPMLFVRGDGVILVSPP 65 Query: 153 LRT 145 RT Sbjct: 66 TRT 68 >ref|XP_005650643.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169] gi|384252623|gb|EIE26099.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169] Length = 95 Score = 83.2 bits (204), Expect = 7e-14 Identities = 49/89 (55%), Positives = 52/89 (58%), Gaps = 29/89 (32%) Frame = -1 Query: 327 SAVKEPLDLIRLSLDERIYVKLRSDRELXXXX---------------------------- 232 + VKEPLDLIRLSLDERIYVKLR DREL Sbjct: 6 ATVKEPLDLIRLSLDERIYVKLRGDRELRGRLHAYDQHLNMILGEVEETITSIEIDDETY 65 Query: 231 -EIVRTTKRTVPFLFVRGDGVILVSPPLR 148 EI++T KR VPFLFVRGDGVILVSPPLR Sbjct: 66 EEIIKTNKRAVPFLFVRGDGVILVSPPLR 94