BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00031429
         (1116 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub...   345   3e-92
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...   303   2e-79
emb|CBI29879.3| unnamed protein product [Vitis vinifera]              303   2e-79
ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I sub...   296   2e-77
ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I sub...   296   2e-77
gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus g...   296   2e-77
ref|XP_009345036.1| PREDICTED: DNA-directed RNA polymerase I sub...   296   2e-77
ref|XP_009345035.1| PREDICTED: DNA-directed RNA polymerase I sub...   296   2e-77
ref|XP_011469851.1| PREDICTED: DNA-directed RNA polymerase I sub...   295   5e-77
ref|XP_008392178.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   295   6e-77
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub...   293   2e-76
ref|XP_008240981.1| PREDICTED: DNA-directed RNA polymerase I sub...   292   3e-76
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   290   1e-75
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial...   288   4e-75
ref|XP_008443105.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   287   1e-74
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub...   286   2e-74
ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub...   286   2e-74
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   286   3e-74
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   286   3e-74
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   286   3e-74

>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
            nucifera]
          Length = 1676

 Score =  345 bits (886), Expect = 3e-92
 Identities = 181/324 (55%), Positives = 228/324 (70%), Gaps = 8/324 (2%)
 Frame = -2

Query: 1112 GDANDIEA-EDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGN 936
            GD +D EA +DLG DAQKRK QATDEMDY ED ME E    EN  +          ++  
Sbjct: 1352 GDDDDYEAPDDLGADAQKRKRQATDEMDY-EDDMENEIVNTENGRSDIEASAGFESEIDQ 1410

Query: 935  KENDQGT--DGEPQILDAEEEPKSVPASKS--SDKREPGSXXXXXXXXXXXXXXKESDRV 768
             E + G   DGE Q+ DAE+E    P+     S  +  G               K+SDR 
Sbjct: 1411 AEVEAGNIMDGEIQVFDAEDEASQTPSQHGTVSKSKSSGGKDEADARGMTRRTKKDSDRA 1470

Query: 767  FFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDHNR---DAKL 597
            FF+ A+GLDFEVH RFT+EPHI+L+++ +K AKNVY+KRSGNIE CSV+   +   + ++
Sbjct: 1471 FFMVAEGLDFEVHFRFTNEPHILLAQIAQKTAKNVYVKRSGNIELCSVVVPKKADGEPEI 1530

Query: 596  AALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDAYGIK 417
              LQT+GVDF  FW+M DDLDI  + SND+H VL TYGVEAARATII +V  VF +YGI 
Sbjct: 1531 PELQTSGVDFPTFWNMQDDLDIRRLKSNDIHAVLNTYGVEAARATIIEQVNQVFKSYGIA 1590

Query: 416  VNIRHLTLIADYMTQTGAIRPFSRYGIASSTSPFSKMSFETAAKFIVDAAYHGEVDDLES 237
            VNIRHL+LIAD+MTQTG  RP SR+GIA + SPFSKMS+ETA++F+++AAYHGE+D+LES
Sbjct: 1591 VNIRHLSLIADFMTQTGGYRPMSRFGIAETISPFSKMSYETASRFVIEAAYHGEMDNLES 1650

Query: 236  PSARICLGLPVKVGTGSFDLLQQV 165
            PSARICLGLPVK+GTG FDL+Q++
Sbjct: 1651 PSARICLGLPVKMGTGCFDLMQKI 1674


>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score =  303 bits (775), Expect = 2e-79
 Identities = 172/339 (50%), Positives = 218/339 (64%), Gaps = 26/339 (7%)
 Frame = -2

Query: 1103 NDIEAEDLGVDAQKRKEQATDEMDYGE-----DGMETETSLVENVDAXXXXXXXXSDDVG 939
            +D  AEDLG+DAQKRK+QA+DEMDYG+     D  E    L E +D          D+V 
Sbjct: 1364 DDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVE-------DEVE 1416

Query: 938  NKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 759
               N+     E  I D ++E   VP SKS   +   +              K+ DR   V
Sbjct: 1417 ISNNE-----EVGISDPKDEDSKVP-SKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILV 1470

Query: 758  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDHNRDA-------- 603
            +AKG  FEVH RFT+EPHI+L+++ +KAA  VYI+ SG I+ C VID N+D         
Sbjct: 1471 KAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDP 1530

Query: 602  ------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
                        KL ALQTAGVDF AFW M D+LD+ ++ SN++H +L T+GVEAARATI
Sbjct: 1531 KKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATI 1590

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 282
            I EV  VF+AYG+KVNIRHL+LIAD+MT +G  RP +R+ GIA S SPFSKM+FETA+KF
Sbjct: 1591 IKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKF 1650

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IV+AA HG  D+LES SARICLGLPVK+GTG FDL+Q++
Sbjct: 1651 IVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1689


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  303 bits (775), Expect = 2e-79
 Identities = 172/339 (50%), Positives = 218/339 (64%), Gaps = 26/339 (7%)
 Frame = -2

Query: 1103 NDIEAEDLGVDAQKRKEQATDEMDYGE-----DGMETETSLVENVDAXXXXXXXXSDDVG 939
            +D  AEDLG+DAQKRK+QA+DEMDYG+     D  E    L E +D          D+V 
Sbjct: 1342 DDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVE-------DEVE 1394

Query: 938  NKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 759
               N+     E  I D ++E   VP SKS   +   +              K+ DR   V
Sbjct: 1395 ISNNE-----EVGISDPKDEDSKVP-SKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILV 1448

Query: 758  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDHNRDA-------- 603
            +AKG  FEVH RFT+EPHI+L+++ +KAA  VYI+ SG I+ C VID N+D         
Sbjct: 1449 KAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDP 1508

Query: 602  ------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
                        KL ALQTAGVDF AFW M D+LD+ ++ SN++H +L T+GVEAARATI
Sbjct: 1509 KKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATI 1568

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 282
            I EV  VF+AYG+KVNIRHL+LIAD+MT +G  RP +R+ GIA S SPFSKM+FETA+KF
Sbjct: 1569 IKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKF 1628

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IV+AA HG  D+LES SARICLGLPVK+GTG FDL+Q++
Sbjct: 1629 IVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1667


>ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
            [Eucalyptus grandis]
          Length = 1669

 Score =  296 bits (759), Expect = 2e-77
 Identities = 171/339 (50%), Positives = 214/339 (63%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1115 EGDANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGN 936
            +GD +  + +DLG D QKRK QATDEM+Y EDG E E +  E + A        ++DV  
Sbjct: 1340 DGDDDGNDNDDLGFDGQKRKRQATDEMEY-EDGYEEERNEPE-LSAGLESDGDQANDVDI 1397

Query: 935  KENDQGTDG-EPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 759
             E+  G  G  P+I+   +  KS   +KS D+ +                 KE DR  FV
Sbjct: 1398 GEDGDGPPGIAPEIVSPSKTKKSKKNAKSDDEGKK---------RVRTKVIKEFDRAIFV 1448

Query: 758  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------HNRDA 603
             A GLDFEVH RFT+EPH++L ++ +K AK VY++ SG IE C VI         +  D 
Sbjct: 1449 AANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDP 1508

Query: 602  K------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
            K            + A+ T G DF A W M D LDI +I SND+H +L TYGVEAAR TI
Sbjct: 1509 KRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETI 1568

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 282
            I EV+ VF +YGI V++RHLTLIAD+MT  G  RP +R  GIA S SPFSKMSFETA+KF
Sbjct: 1569 IREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKF 1628

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IVDAAYHG VD+LE+PSARICLGLP+K+GTGSFDLLQ++
Sbjct: 1629 IVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKI 1667


>ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
            [Eucalyptus grandis]
          Length = 1669

 Score =  296 bits (759), Expect = 2e-77
 Identities = 171/339 (50%), Positives = 214/339 (63%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1115 EGDANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGN 936
            +GD +  + +DLG D QKRK QATDEM+Y EDG E E +  E + A        ++DV  
Sbjct: 1340 DGDDDGNDNDDLGFDGQKRKRQATDEMEY-EDGYEEERNEPE-LSAGLESDGDQANDVDI 1397

Query: 935  KENDQGTDG-EPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 759
             E+  G  G  P+I+   +  KS   +KS D+ +                 KE DR  FV
Sbjct: 1398 GEDGDGPPGIAPEIVSPSKTKKSKKNAKSDDEGKK---------RVRTKVIKEFDRAIFV 1448

Query: 758  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------HNRDA 603
             A GLDFEVH RFT+EPH++L ++ +K AK VY++ SG IE C VI         +  D 
Sbjct: 1449 AANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDP 1508

Query: 602  K------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
            K            + A+ T G DF A W M D LDI +I SND+H +L TYGVEAAR TI
Sbjct: 1509 KRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETI 1568

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 282
            I EV+ VF +YGI V++RHLTLIAD+MT  G  RP +R  GIA S SPFSKMSFETA+KF
Sbjct: 1569 IREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKF 1628

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IVDAAYHG VD+LE+PSARICLGLP+K+GTGSFDLLQ++
Sbjct: 1629 IVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKI 1667


>gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus grandis]
          Length = 1606

 Score =  296 bits (759), Expect = 2e-77
 Identities = 171/339 (50%), Positives = 214/339 (63%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1115 EGDANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGN 936
            +GD +  + +DLG D QKRK QATDEM+Y EDG E E +  E + A        ++DV  
Sbjct: 1277 DGDDDGNDNDDLGFDGQKRKRQATDEMEY-EDGYEEERNEPE-LSAGLESDGDQANDVDI 1334

Query: 935  KENDQGTDG-EPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 759
             E+  G  G  P+I+   +  KS   +KS D+ +                 KE DR  FV
Sbjct: 1335 GEDGDGPPGIAPEIVSPSKTKKSKKNAKSDDEGKK---------RVRTKVIKEFDRAIFV 1385

Query: 758  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------HNRDA 603
             A GLDFEVH RFT+EPH++L ++ +K AK VY++ SG IE C VI         +  D 
Sbjct: 1386 AANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYGEDP 1445

Query: 602  K------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
            K            + A+ T G DF A W M D LDI +I SND+H +L TYGVEAAR TI
Sbjct: 1446 KRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAARETI 1505

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 282
            I EV+ VF +YGI V++RHLTLIAD+MT  G  RP +R  GIA S SPFSKMSFETA+KF
Sbjct: 1506 IREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETASKF 1565

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IVDAAYHG VD+LE+PSARICLGLP+K+GTGSFDLLQ++
Sbjct: 1566 IVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKI 1604


>ref|XP_009345036.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
            [Pyrus x bretschneideri]
          Length = 1373

 Score =  296 bits (758), Expect = 2e-77
 Identities = 163/338 (48%), Positives = 215/338 (63%), Gaps = 29/338 (8%)
 Frame = -2

Query: 1091 AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKENDQGTD 912
            AED G+DAQKRK QA DEMDY EDG E E    +  D         +D+  + E   G D
Sbjct: 1037 AEDFGMDAQKRKLQAFDEMDY-EDGCEDEVRDGDLTDGDEVENDADNDEENDVET--GKD 1093

Query: 911  GEPQILDAE--------EEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFVE 756
            G  +++DA         EE  ++P  KS +K+                  K++DR  FV 
Sbjct: 1094 GAIEVVDATDEMPTSPLEEAGNLPKPKSKEKKNKSGATIKKKKIRAQLVRKDTDRSIFVS 1153

Query: 755  AKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVI--DHNR--------- 609
            AKG  FE+H +FTDEPHI+L+++ ++ A+ V ++RSG+++ C  I  D N+         
Sbjct: 1154 AKGFHFEIHFKFTDEPHILLAQIAQQTAQKVSMQRSGSVDDCKQITCDENQVLLYGKDPE 1213

Query: 608  ---------DAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATII 456
                       ++AALQT GVDF  FW + D LD+ ++ SN++H +L TYGVEAAR TII
Sbjct: 1214 NKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYLYSNNIHAMLNTYGVEAARETII 1273

Query: 455  NEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKFI 279
             E+  VF +YGI VNIRHLTLIADYMT +G  RP +R+ GIA S SPF+KMSFETA+KFI
Sbjct: 1274 REIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRFGGIAESISPFNKMSFETASKFI 1333

Query: 278  VDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            V+AAYHG+ DDLE+PS+RICLGLPVKVGTG FDL+Q++
Sbjct: 1334 VEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKI 1371


>ref|XP_009345035.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
            [Pyrus x bretschneideri]
          Length = 1684

 Score =  296 bits (758), Expect = 2e-77
 Identities = 163/338 (48%), Positives = 215/338 (63%), Gaps = 29/338 (8%)
 Frame = -2

Query: 1091 AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKENDQGTD 912
            AED G+DAQKRK QA DEMDY EDG E E    +  D         +D+  + E   G D
Sbjct: 1348 AEDFGMDAQKRKLQAFDEMDY-EDGCEDEVRDGDLTDGDEVENDADNDEENDVET--GKD 1404

Query: 911  GEPQILDAE--------EEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFVE 756
            G  +++DA         EE  ++P  KS +K+                  K++DR  FV 
Sbjct: 1405 GAIEVVDATDEMPTSPLEEAGNLPKPKSKEKKNKSGATIKKKKIRAQLVRKDTDRSIFVS 1464

Query: 755  AKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVI--DHNR--------- 609
            AKG  FE+H +FTDEPHI+L+++ ++ A+ V ++RSG+++ C  I  D N+         
Sbjct: 1465 AKGFHFEIHFKFTDEPHILLAQIAQQTAQKVSMQRSGSVDDCKQITCDENQVLLYGKDPE 1524

Query: 608  ---------DAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATII 456
                       ++AALQT GVDF  FW + D LD+ ++ SN++H +L TYGVEAAR TII
Sbjct: 1525 NKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYLYSNNIHAMLNTYGVEAARETII 1584

Query: 455  NEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKFI 279
             E+  VF +YGI VNIRHLTLIADYMT +G  RP +R+ GIA S SPF+KMSFETA+KFI
Sbjct: 1585 REIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRFGGIAESISPFNKMSFETASKFI 1644

Query: 278  VDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            V+AAYHG+ DDLE+PS+RICLGLPVKVGTG FDL+Q++
Sbjct: 1645 VEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKI 1682


>ref|XP_011469851.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Fragaria vesca
            subsp. vesca]
          Length = 1674

 Score =  295 bits (755), Expect = 5e-77
 Identities = 169/350 (48%), Positives = 211/350 (60%), Gaps = 33/350 (9%)
 Frame = -2

Query: 1115 EGDANDIE--AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDV 942
            +GD +D    AED G+DAQKRK Q TDEM+Y E   E E S   + D           D 
Sbjct: 1329 DGDIDDSGEGAEDFGLDAQKRKRQGTDEMEY-EGDCEDEVSEGHHSDRFESEI-----DK 1382

Query: 941  GNKENDQGTDGEPQILDAEEEPKSVPASKSSDK-----REPGSXXXXXXXXXXXXXXKES 777
            G  + +   DG   I DA +E    P++  + K     ++  S              KE 
Sbjct: 1383 GESDVEIDKDGVMGISDANDEMHESPSTGDTSKPQSKGKKTKSREKIKKKTRAKLVRKEY 1442

Query: 776  DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID------- 618
            DR  FV AKG  FE+H +FT+EPHI+L ++  K A+NVY+K SGNI  C  ID       
Sbjct: 1443 DRATFVSAKGFHFEIHFKFTNEPHILLDQIARKTARNVYVKSSGNILDCKDIDIYGNEDQ 1502

Query: 617  ------------------HNRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLR 492
                                 + K+ A+QTAGVDF   W + DDLD+N+I SN++H +L 
Sbjct: 1503 VFCSWNDPRNKLPGEKNPTKEEKKMRAVQTAGVDFATLWKLQDDLDVNYIYSNNIHAMLN 1562

Query: 491  TYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPF 315
            TYGVEAAR TII E+  VF  YGI VNIRHL+LIADYMT +G  RP +R+ GIA STSP 
Sbjct: 1563 TYGVEAARETIIKEISNVFKVYGISVNIRHLSLIADYMTHSGGYRPMNRFGGIAESTSPI 1622

Query: 314  SKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            +KMSFETA+KFI +AAYHGE DDLE+PSARICLGLPVKVGTGSFDL+Q++
Sbjct: 1623 NKMSFETASKFIREAAYHGETDDLETPSARICLGLPVKVGTGSFDLMQKM 1672


>ref|XP_008392178.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            rpa1-like [Malus domestica]
          Length = 1682

 Score =  295 bits (754), Expect = 6e-77
 Identities = 163/338 (48%), Positives = 215/338 (63%), Gaps = 29/338 (8%)
 Frame = -2

Query: 1091 AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKENDQGTD 912
            AED G+DAQKRK QA DEMDY EDG E E    +  D         +D+  + E   G D
Sbjct: 1346 AEDFGMDAQKRKLQAFDEMDY-EDGCEDEVRDGDLTDGDEVENDADNDEENDVET--GKD 1402

Query: 911  GEPQILDAEEEPKSVPA--------SKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFVE 756
            G  +++DA +E  + P         +KS +K+                  K++DR  FV 
Sbjct: 1403 GAIEVVDATDEMPANPLEEAGDLLKTKSKEKKNKSGATIKKKKIRAQLVRKDTDRSIFVS 1462

Query: 755  AKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVI--DHNR--------- 609
            AKG  FEVH +FTDEPHI+L+++ ++ A+ V ++RSG+++ C  I  D N+         
Sbjct: 1463 AKGFHFEVHFKFTDEPHILLAQIAQQTAQKVCMQRSGSVDDCKQITCDENQVLLYGKDPE 1522

Query: 608  ---------DAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATII 456
                       ++AALQT GVDF  FW + D LD+ ++ SN++H +L TYGVEAAR TII
Sbjct: 1523 NKQSYSSKEKKEMAALQTTGVDFRTFWKLQDVLDVRYLYSNNIHAMLNTYGVEAARETII 1582

Query: 455  NEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKFI 279
             E+  VF +YGI VNIRHLTLIADYMT +G  RP +R+ GIA S SPF+KMSFETA+KFI
Sbjct: 1583 REIMNVFKSYGISVNIRHLTLIADYMTHSGGYRPMNRFGGIAESISPFNKMSFETASKFI 1642

Query: 278  VDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            V+AAYHG+ DDLE+PS+RICLGLPVKVGTG FDL+Q++
Sbjct: 1643 VEAAYHGQTDDLETPSSRICLGLPVKVGTGCFDLMQKI 1680


>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Elaeis
            guineensis]
          Length = 1674

 Score =  293 bits (750), Expect = 2e-76
 Identities = 167/333 (50%), Positives = 215/333 (64%), Gaps = 18/333 (5%)
 Frame = -2

Query: 1109 DANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSL-VENVDAXXXXXXXXSDDVGNK 933
            D +D   ED G+DA+KRK++A+DEM+Y EDG+E E S   +  D           D    
Sbjct: 1342 DDDDGINEDEGMDAEKRKKRASDEMEY-EDGIEKENSAKADEHDGETQSGFESEIDQVEA 1400

Query: 932  ENDQGTDGEPQI------LDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKES-- 777
            + D    G+P +      L+AEE P+S   ++ +   E G                +   
Sbjct: 1401 DEDYTVGGDPSMEVEDPSLEAEETPESPSKAEPTPTLEDGKKKQKLADNKESKSESKKKT 1460

Query: 776  --------DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVI 621
                    +R  FV+AKGL FEVH  F  EP I+L++V +KAAK+VY+K S NIE CSV 
Sbjct: 1461 TKPRKKKINRTIFVDAKGLTFEVHYIFKKEPRILLAEVAQKAAKSVYVKESKNIELCSVP 1520

Query: 620  DHNRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKG 441
            +  +D  L+ LQTAGV+F AFWD+ D LDIN I SND+H +L TYGVEAARATII EVKG
Sbjct: 1521 EPKKDEPLS-LQTAGVNFQAFWDLEDHLDINKITSNDIHAMLNTYGVEAARATIIKEVKG 1579

Query: 440  VFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRYGIAS-STSPFSKMSFETAAKFIVDAAY 264
            VFDAYGI+VNIRHLTLIAD+MT  G  RP +R G+ + +TSPF KM+FETA KFIV +A+
Sbjct: 1580 VFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGSAF 1639

Query: 263  HGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            HGEVD L++PSA +CLG PVK+GTG FDL+Q +
Sbjct: 1640 HGEVDTLDAPSASVCLGQPVKMGTGCFDLMQNL 1672


>ref|XP_008240981.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Prunus mume]
          Length = 1637

 Score =  292 bits (748), Expect = 3e-76
 Identities = 169/353 (47%), Positives = 215/353 (60%), Gaps = 37/353 (10%)
 Frame = -2

Query: 1112 GDANDIE----AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDD 945
            G A+D E     ED G+DA KRK QATDEMDY EDG + E    +  D           +
Sbjct: 1286 GGADDGEHGEGVEDFGLDAHKRKLQATDEMDY-EDGCDDEVREADLSDGDE-------SE 1337

Query: 944  VGNKENDQ--GTDGEPQILDAEEEPKSVPASKSSDKREP---------GSXXXXXXXXXX 798
            +  +EN+   G DGE  ++DA +E    P  ++ D  +P         GS          
Sbjct: 1338 IDEEENEVEIGKDGEIGVIDASDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRA 1397

Query: 797  XXXXKESDRVFFVEAKGLDFEVHLRFTD-EPHIILSKVVEKAAKNVYIKRSGNIERCSVI 621
                KE+DR  FV AKG  FEVH RFTD EPHI+LS++ +K A+ VYI+RSG +  C  I
Sbjct: 1398 EMVKKETDRAIFVSAKGFHFEVHFRFTDNEPHILLSQIAQKTAQKVYIQRSGKVADCKQI 1457

Query: 620  --DHNR------------------DAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHT 501
              D N+                    ++ ALQT G+DFG FW + D LD+ +I SN++H 
Sbjct: 1458 TCDENQVLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDILDVRYIYSNNIHA 1517

Query: 500  VLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASST 324
            +L TYGVEAAR TII E+  VF +YGI VNIRHLTLIAD+MT  G  RP +R+ GI  S 
Sbjct: 1518 MLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESI 1577

Query: 323  SPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            SPF+KM+FETA+KFIV+AAYHG+VD LE+PSARICLGLPV VGTG FDL+ ++
Sbjct: 1578 SPFNKMTFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHKM 1630


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  290 bits (743), Expect = 1e-75
 Identities = 168/353 (47%), Positives = 214/353 (60%), Gaps = 37/353 (10%)
 Frame = -2

Query: 1112 GDANDIE----AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDD 945
            G A+D E     ED G+DA KRK QATDEMDY EDG + E    +  D           +
Sbjct: 1261 GGADDGEHGEGVEDFGLDAHKRKLQATDEMDY-EDGCDDEVREADLSDGDE-------SE 1312

Query: 944  VGNKENDQ--GTDGEPQILDAEEEPKSVPASKSSDKREP---------GSXXXXXXXXXX 798
            +  +EN+   G DGE  ++DA +E    P  ++ D  +P         GS          
Sbjct: 1313 IDEEENEVEIGKDGEIGVIDANDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRA 1372

Query: 797  XXXXKESDRVFFVEAKGLDFEVHLRFTD-EPHIILSKVVEKAAKNVYIKRSGNIERCSVI 621
                KE+DR  FV AKG  FEVH RF D EPHI+LS++ +K A+ VYI+RSG +  C  I
Sbjct: 1373 EMVKKETDRAIFVSAKGFHFEVHFRFADNEPHILLSQIAQKTAQKVYIQRSGKVADCKQI 1432

Query: 620  --DHNR------------------DAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHT 501
              D N+                    ++ ALQT G+DFG FW + D LD+ +I SN++H 
Sbjct: 1433 TCDENQVLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDVLDVRYIYSNNIHA 1492

Query: 500  VLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASST 324
            +L TYGVEAAR TII E+  VF +YGI VNIRHLTLIAD+MT  G  RP +R+ GI  S 
Sbjct: 1493 MLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESI 1552

Query: 323  SPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            SPF+KM+FETA+KFIV+AAYHG+VD LE+PSARICLGLPV VGTG FDL+ ++
Sbjct: 1553 SPFNKMTFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHKM 1605


>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
          Length = 1669

 Score =  288 bits (738), Expect = 4e-75
 Identities = 162/333 (48%), Positives = 214/333 (64%), Gaps = 18/333 (5%)
 Frame = -2

Query: 1109 DANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSL-VENVDAXXXXXXXXSDDVGNK 933
            D +D   ED G+DA+KRK++A+DEM+Y EDG+E E+S   +  D           D    
Sbjct: 1338 DDDDGINEDEGMDAEKRKQRASDEMEY-EDGIEKESSAKADEHDGDTQSGFESEIDQVEA 1396

Query: 932  ENDQGTDGEPQI------LDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKES-- 777
            + D    G+P +      L+ EE P+S   ++ +   E G                +   
Sbjct: 1397 DEDYTVGGDPSMEVEDPSLEVEETPESPSKAEPTPTLEDGKKKQKLADSKESKSESKKKK 1456

Query: 776  --------DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVI 621
                    +R  FV+AKGL FEVH  F +EP I+L++V +K AK+VY++ S NIE CSV 
Sbjct: 1457 TKSRKKKINRTIFVDAKGLKFEVHYIFKEEPRILLAEVAQKTAKSVYVRDSKNIELCSVA 1516

Query: 620  DHNRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKG 441
            +  +D  L+ LQTAGV+F AFWD+ D LD+N I SND+H +L TYGVE ARATII EVKG
Sbjct: 1517 EPKKDEPLS-LQTAGVNFQAFWDLEDHLDVNKITSNDIHAMLNTYGVEVARATIIKEVKG 1575

Query: 440  VFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRYGIAS-STSPFSKMSFETAAKFIVDAAY 264
            VFDAYGI+VNIRHLTLIAD+MT  G  RP +R G+ + +TSPF KM+FETA KFIV +A+
Sbjct: 1576 VFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRIGMNNFNTSPFGKMTFETATKFIVGSAF 1635

Query: 263  HGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            HGEVD L++PSA +CLG PVK+GTG FDL+Q +
Sbjct: 1636 HGEVDALDAPSASVCLGQPVKMGTGCFDLMQNL 1668


>ref|XP_008443105.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            rpa1 [Cucumis melo]
          Length = 1681

 Score =  287 bits (735), Expect = 1e-74
 Identities = 158/339 (46%), Positives = 217/339 (64%), Gaps = 26/339 (7%)
 Frame = -2

Query: 1103 NDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKE- 930
            ND++ AEDLG D +K+K QATDEMDY +D  +   +   +             ++ N E 
Sbjct: 1350 NDLDVAEDLGSDMKKQKLQATDEMDYEDDSEDDLNAKEPSTGFESEVDQGDEAEITNNEI 1409

Query: 929  ---NDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFV 759
                D  ++ EP+I+D  +       +++S+K++                 K++DR  F 
Sbjct: 1410 EIVKDSASENEPEIVDISKSESKEKTTETSEKKKK---------VKSEFNRKDTDRSIFA 1460

Query: 758  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCS--------VIDHNRDA 603
            EAK   FEVH +FT+EPHI+LS++ ++AA+ V I+RSG I +C         VI H  + 
Sbjct: 1461 EAKENHFEVHFKFTNEPHILLSQIAQRAAQKVSIQRSGKIIQCQQITCKEGQVIYHGNNL 1520

Query: 602  K------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
            K            + ALQT+GVDF   W+M D+LD+ +I SND+H +L+TYGVEAARATI
Sbjct: 1521 KERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVEAARATI 1580

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 282
            I E++ +F +YGI VNIRHL+L+ADYMT +G  RP SR  GI+ S SPFS+M+FETA KF
Sbjct: 1581 IREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTFETAGKF 1640

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IV AA HGEVD+LE+PS+RICLGLPVK+GTGSFDL+QQ+
Sbjct: 1641 IVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQQI 1679


>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
            raimondii] gi|763751831|gb|KJB19219.1| hypothetical
            protein B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score =  286 bits (733), Expect = 2e-74
 Identities = 164/329 (49%), Positives = 206/329 (62%), Gaps = 20/329 (6%)
 Frame = -2

Query: 1091 AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVGNKENDQ-GT 915
            AEDLG+DAQK+K+QATDEMDY EDG E E +   ++           D+ G  EN+  G+
Sbjct: 1346 AEDLGLDAQKQKQQATDEMDY-EDGSEEEQNEGASLAGLESENDMSEDENGTIENNVIGS 1404

Query: 914  DGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVFFVEAKGLDFE 735
            D E   +     P +   SK   +                   KE+DR  F   KGL FE
Sbjct: 1405 DNEKDDI-FHGSPNAEDGSKLKSREGNTRAEPKRKKMRGKFIRKETDRAIFSATKGLVFE 1463

Query: 734  VHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDHNRD----------------- 606
            VH +F +EPHI+L+++ EK AK VYI+  G I++C V D + +                 
Sbjct: 1464 VHFKFVNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGEDPKQRKSPSG 1523

Query: 605  -AKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKGVFDA 429
             A + AL TAGVDFGAFW M   LD+ ++ SN++H +L TYGVEAAR TII+E+  VF +
Sbjct: 1524 KANIPALHTAGVDFGAFWKMEGHLDVRYLYSNNIHAMLNTYGVEAARETIISEISNVFTS 1583

Query: 428  YGIKVNIRHLTLIADYMTQTGAIRPFSRYG-IASSTSPFSKMSFETAAKFIVDAAYHGEV 252
            YGI VNIRHLTLIAD+MT +G  RP SR G IA   SPFSKMSFETA+KFIVDAA HG V
Sbjct: 1584 YGIGVNIRHLTLIADFMTHSGRYRPMSRLGSIAECISPFSKMSFETASKFIVDAAKHGLV 1643

Query: 251  DDLESPSARICLGLPVKVGTGSFDLLQQV 165
            D+LE+PS+RICLGLPVK+GTGSF L+Q V
Sbjct: 1644 DNLETPSSRICLGLPVKMGTGSFGLMQNV 1672


>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Phoenix
            dactylifera]
          Length = 1665

 Score =  286 bits (733), Expect = 2e-74
 Identities = 172/339 (50%), Positives = 216/339 (63%), Gaps = 24/339 (7%)
 Frame = -2

Query: 1109 DANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLV--ENVDAXXXXXXXXSDDVGN 936
            D +D   ED G+DA+KRK++A+DEM+Y EDG+E E+S    E+            D V  
Sbjct: 1332 DDDDGINEDEGMDAEKRKKRASDEMEY-EDGIEKESSAKADEHDGETQSGFESEIDQVEA 1390

Query: 935  KEN-----DQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKES-- 777
             E+     D   + E   L+ EEE   +P S S  K EP                KES  
Sbjct: 1391 DEDYTVGGDHSMEVEDPSLEVEEE---IPESPS--KAEPTPTLEDGKKQQKLADSKESKS 1445

Query: 776  --------------DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNI 639
                          +R  FV+AKGL+FEVH  F  EP I+L++V +KAAK+VY+K S NI
Sbjct: 1446 ESNKTTTKPRKKKINRTIFVDAKGLNFEVHYIFKKEPRILLAEVAQKAAKSVYVKESKNI 1505

Query: 638  ERCSVIDHNRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
            E CSV +  +D  L+ LQTAGV+F AFWD+ D LDIN I SND+H +L TYGVEAARATI
Sbjct: 1506 ELCSVTEPKKDEPLS-LQTAGVNFQAFWDLEDHLDINKITSNDIHAMLNTYGVEAARATI 1564

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRYGIAS-STSPFSKMSFETAAKF 282
            I EVKGVFDAYGI+VNIRHL LIAD+MT  G  RP +R G+   +TSPF KM+FETA KF
Sbjct: 1565 IKEVKGVFDAYGIRVNIRHLMLIADFMTFHGGYRPMNRIGMTDFNTSPFGKMTFETATKF 1624

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IV +A+HGEVD L++PSA +CLG PVK+GTG FDL+Q +
Sbjct: 1625 IVGSAFHGEVDTLDAPSASVCLGQPVKMGTGCFDLMQNL 1663


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  286 bits (731), Expect = 3e-74
 Identities = 166/339 (48%), Positives = 213/339 (62%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1115 EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVG 939
            + DA+D E AEDLG+DAQK+K+Q TDEMDY ED  E E +   ++ A         D+ G
Sbjct: 1060 DDDADDEERAEDLGLDAQKQKQQTTDEMDY-EDDSEVEQNEGASLAALESEIDMSEDETG 1118

Query: 938  NKE-NDQGTD-GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVF 765
              + N  G+D G+ +I  ++  P     S    + E                 KESDR  
Sbjct: 1119 TIQINMIGSDNGKDEI--SQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1176

Query: 764  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDHNRDA------ 603
            F   +GL FEVH +  +EPHI+L+++ EK AK VYI+  G I++C V D + +       
Sbjct: 1177 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1236

Query: 602  ------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
                        K+ AL T GVDFGAFW M D +D+ ++ SN +H +L TYGVEAAR TI
Sbjct: 1237 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1296

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 282
            I E+  VF +YGI VNIRHLTLIAD+MT +G  RP SR  GIA S SPFSKMSFETA+KF
Sbjct: 1297 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1356

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IV+AA HG VD+LE+PS+RICLGLPVK+GTGSFDL+Q+V
Sbjct: 1357 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1395


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  286 bits (731), Expect = 3e-74
 Identities = 166/339 (48%), Positives = 213/339 (62%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1115 EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVG 939
            + DA+D E AEDLG+DAQK+K+Q TDEMDY ED  E E +   ++ A         D+ G
Sbjct: 1063 DDDADDEERAEDLGLDAQKQKQQTTDEMDY-EDDSEVEQNEGASLAALESEIDMSEDETG 1121

Query: 938  NKE-NDQGTD-GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVF 765
              + N  G+D G+ +I  ++  P     S    + E                 KESDR  
Sbjct: 1122 TIQINMIGSDNGKDEI--SQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1179

Query: 764  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDHNRDA------ 603
            F   +GL FEVH +  +EPHI+L+++ EK AK VYI+  G I++C V D + +       
Sbjct: 1180 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1239

Query: 602  ------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
                        K+ AL T GVDFGAFW M D +D+ ++ SN +H +L TYGVEAAR TI
Sbjct: 1240 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1299

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 282
            I E+  VF +YGI VNIRHLTLIAD+MT +G  RP SR  GIA S SPFSKMSFETA+KF
Sbjct: 1300 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1359

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IV+AA HG VD+LE+PS+RICLGLPVK+GTGSFDL+Q+V
Sbjct: 1360 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1398


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  286 bits (731), Expect = 3e-74
 Identities = 166/339 (48%), Positives = 213/339 (62%), Gaps = 22/339 (6%)
 Frame = -2

Query: 1115 EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXSDDVG 939
            + DA+D E AEDLG+DAQK+K+Q TDEMDY ED  E E +   ++ A         D+ G
Sbjct: 1352 DDDADDEERAEDLGLDAQKQKQQTTDEMDY-EDDSEVEQNEGASLAALESEIDMSEDETG 1410

Query: 938  NKE-NDQGTD-GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXKESDRVF 765
              + N  G+D G+ +I  ++  P     S    + E                 KESDR  
Sbjct: 1411 TIQINMIGSDNGKDEI--SQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1468

Query: 764  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDHNRDA------ 603
            F   +GL FEVH +  +EPHI+L+++ EK AK VYI+  G I++C V D + +       
Sbjct: 1469 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1528

Query: 602  ------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 459
                        K+ AL T GVDFGAFW M D +D+ ++ SN +H +L TYGVEAAR TI
Sbjct: 1529 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1588

Query: 458  INEVKGVFDAYGIKVNIRHLTLIADYMTQTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 282
            I E+  VF +YGI VNIRHLTLIAD+MT +G  RP SR  GIA S SPFSKMSFETA+KF
Sbjct: 1589 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1648

Query: 281  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 165
            IV+AA HG VD+LE+PS+RICLGLPVK+GTGSFDL+Q+V
Sbjct: 1649 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1687