BLASTX nr result
ID: Papaver30_contig00030916
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00030916
(3324 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise... 169 5e-86
ref|XP_010484154.1| PREDICTED: DNA topoisomerase 3-alpha-like [C... 165 1e-85
ref|XP_010444313.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 163 2e-85
ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Caps... 166 4e-85
gb|KFK28084.1| hypothetical protein AALP_AA8G470200 [Arabis alpina] 162 5e-85
ref|XP_010674422.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 172 9e-85
ref|XP_010674423.1| PREDICTED: DNA topoisomerase 3-alpha isoform... 172 9e-85
ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutr... 159 1e-84
ref|XP_009130424.1| PREDICTED: DNA topoisomerase 3-alpha [Brassi... 162 1e-84
emb|CDY39837.1| BnaC02g42810D [Brassica napus] 162 2e-84
ref|XP_013616695.1| PREDICTED: DNA topoisomerase 3-alpha [Brassi... 162 2e-84
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab... 167 3e-84
ref|XP_013701142.1| PREDICTED: DNA topoisomerase 3-alpha-like [B... 162 3e-84
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|... 164 3e-84
ref|XP_013678454.1| PREDICTED: DNA topoisomerase 3-alpha-like [B... 162 6e-84
emb|CDY31345.1| BnaA02g33960D [Brassica napus] 162 1e-82
gb|ERM96738.1| hypothetical protein AMTR_s00202p00033660 [Ambore... 165 5e-82
ref|XP_011629125.1| PREDICTED: DNA topoisomerase 3-alpha [Ambore... 165 2e-81
ref|XP_002985109.1| hypothetical protein SELMODRAFT_121488 [Sela... 154 2e-77
ref|XP_002970788.1| hypothetical protein SELMODRAFT_94303 [Selag... 152 1e-76
>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
Length = 813
Score = 169 bits (429), Expect(4) = 5e-86
Identities = 115/295 (38%), Positives = 160/295 (54%), Gaps = 8/295 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPCL-----KGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLCK 1937
RIGA+ +R QT+LL +AF + + YGPC FP LGFVV+ I+ ++
Sbjct: 90 RIGASFTRFQTMLLKDAFLLDFRTDDRSVVLSYGPCQFPTLGFVVERYWEIQSHEPEEFW 149
Query: 1936 VEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDR-TAKVDFVRYSSNRIKS 1760
G ++ TF W + FDYT A +Y C TA V VR ++K
Sbjct: 150 GIGCTHSSEEGVTTFNWM-----RGHLFDYTCATILYEMCVQEPTATVTSVR-QQEKLKY 203
Query: 1759 PPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIV 1580
PP L+TIEL+K AS+Y M +TM+ + L+Q+GFI+YPRT +D + RT L IV
Sbjct: 204 PPYPLSTIELEKRASRYFRMSSEQTMKVAEDLYQAGFISYPRTETDCFSE--RTDLRTIV 261
Query: 1579 QQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
Q+Q+ H WG+ L ETGL N GGH D AH PI+PT + E+ W+ D
Sbjct: 262 QEQQGHPAWGSYAQRLLDPETGLWKNPGAGGHDDKAHPPIHPT---KFSSGESGWSQDHH 318
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLRIYEK 1241
VYEL+VRHFLA VS+PA + I + ++ F+ + +I N+L R +EK
Sbjct: 319 KVYELVVRHFLACVSQPAIGAETTVEIDIASEQFSASGRAIIAKNYLDVYR-FEK 372
Score = 90.1 bits (222), Expect(4) = 5e-86
Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P L L ++PPPL SE DLL M+K IGT+AT H+ +D N F+P
Sbjct: 389 PTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRCYATKDSNTRFSP 448
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCF 784
T LG+AL+ GY +MG E LWKP R +E+D+K + GT+ K EVL+ + CF
Sbjct: 449 TKLGEALVMGYDDMGYE---LWKPHLRAMMESDMKSVSMGTKRKGEVLEACLQQMKACF 504
Score = 68.2 bits (165), Expect(4) = 5e-86
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V +C LC+E+ VLR+ GNF+V CL C WLP A+V+ C+ C
Sbjct: 540 VRKCGLCQESDMVLRKKP-DGNFMVGCLGYPQCRNVVWLPGSVSSASVTTVVCSTCSPG- 597
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRSSPN 378
V ++ KF + +IP Y +HLGCV C + R L +CG G+ S N
Sbjct: 598 ------PVYMIQFKFRQLEIPPNYNVDHLGCVGGCDSVLRQLVEICGTGSRS-------N 644
Query: 377 GRCVNCGHLETSS 339
G +TSS
Sbjct: 645 SNVPGTGQGQTSS 657
Score = 63.9 bits (154), Expect(4) = 5e-86
Identities = 37/101 (36%), Positives = 55/101 (54%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLE+EAS L+LWLD D +GENI F+ ++VC +N ++ R S
Sbjct: 6 IEKTLEQEASRCQWLILWLDCDREGENIAFEVVEVCTRAN---RNLNVWRARFSA----- 57
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A QH++ P + + AVDVR+E+D + F
Sbjct: 58 ---LIDREIHYAMQHLIRPNQLFADAVDVRQEIDLRIGASF 95
>ref|XP_010484154.1| PREDICTED: DNA topoisomerase 3-alpha-like [Camelina sativa]
Length = 920
Score = 165 bits (417), Expect(4) = 1e-85
Identities = 106/291 (36%), Positives = 152/291 (52%), Gaps = 8/291 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC-----LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLCK 1937
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEFW 247
Query: 1936 VEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDR-TAKVDFVRYSSNRIKS 1760
+ TF W + FDY A +Y C + TA V V + R K
Sbjct: 248 TINCSHQSEEGIATFNWM-----RGHLFDYASAVILYEMCVEEPTATVMNVPHPRERFKY 302
Query: 1759 PPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIV 1580
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +V
Sbjct: 303 PPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAMV 360
Query: 1579 QQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
++Q H WG+ L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 EEQTRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDHL 417
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 NVYELVVRHYLACVSQPAVAAETTVEIDISGERFSASGRAILAKNYLEVYR 468
Score = 86.7 bits (213), Expect(4) = 1e-85
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 488 PTTLTLDSAVTRPPPLLCEADLLCCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 547
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T+LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 548 THLGEALVMGYDDMGYE---LWKPNLRAVMEHDMNEVSVGRKTKAEVLE-------TCLQ 597
Query: 780 VTFGCF 763
CF
Sbjct: 598 QMKACF 603
Score = 80.9 bits (198), Expect(4) = 1e-85
Identities = 55/153 (35%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ +R GNF+V C+N C WLP T+EA+V+ C C
Sbjct: 639 VRRCNLCNESDMALRK-NRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNACQSC---- 693
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRS--- 387
G V N++ KF + IP + NHLGCV C + L +CG G+ SQ R+
Sbjct: 694 --GPGPVYNIL-FKFRQIGIPPGFDVNHLGCVGGCDDILKQLIDICGTGSRSQARRAPDT 750
Query: 386 -------SPNGRCVN-CGHLETSSHRSVTCSAR 312
N R N C H + H S C +R
Sbjct: 751 VPPNNIRGSNTRQSNVCVHCQQRGHASANCPSR 783
Score = 58.2 bits (139), Expect(4) = 1e-85
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARKSDWLVLWLDCDREGENIAFEVVDVCRAVKHNLF---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIAREIHEAVQNLRDPNQLFAEAVDARQEIDLRIGASF 193
>ref|XP_010444313.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha-like
[Camelina sativa]
Length = 920
Score = 163 bits (412), Expect(4) = 2e-85
Identities = 106/291 (36%), Positives = 150/291 (51%), Gaps = 8/291 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC-----LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLCK 1937
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEFW 247
Query: 1936 VEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDR-TAKVDFVRYSSNRIKS 1760
TF W + FDY A +Y C + TA V V + R K
Sbjct: 248 TINCSHQXEEGIATFNWM-----RGHLFDYASAVILYEMCVEEPTATVMNVPHPRERFKY 302
Query: 1759 PPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIV 1580
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +V
Sbjct: 303 PPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAMV 360
Query: 1579 QQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
++Q H WG+ L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 EEQTRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDHL 417
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ ++ N+L R
Sbjct: 418 NVYELVVRHYLACVSQPAVAAETTVEIDISGERFSAYGRAILAKNYLEVYR 468
Score = 87.8 bits (216), Expect(4) = 2e-85
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 488 PTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 547
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T+LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 548 THLGEALVMGYDDMGYE---LWKPNLRAVMEHDMNEVSVGRKTKAEVLE-------TCLQ 597
Query: 780 VTFGCF 763
CF
Sbjct: 598 QMKACF 603
Score = 78.6 bits (192), Expect(4) = 2e-85
Identities = 53/153 (34%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ +R GNF+V C+N C WLP T+EA+V+ C C
Sbjct: 639 VRRCNLCNESDMALRK-NRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNACQSCGPG- 696
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRS--- 387
V + KF + IP + NHLGCV C + L +CG G+ SQ R+
Sbjct: 697 ------PVYKILFKFRQIGIPPGFDVNHLGCVGGCDDILKQLIDICGTGSRSQARRAPDT 750
Query: 386 -------SPNGRCVN-CGHLETSSHRSVTCSAR 312
N R N C H + H S C +R
Sbjct: 751 VPPNNIRGSNTRQSNVCVHCQQRGHASANCPSR 783
Score = 60.5 bits (145), Expect(4) = 2e-85
Identities = 38/101 (37%), Positives = 54/101 (53%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA N+D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARNSDWLVLWLDCDREGENIAFEVVDVCRAVKHNLF---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIAREIHEAVQNLRDPNQLFAEAVDARQEIDLRIGASF 193
>ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Capsella rubella]
gi|482548679|gb|EOA12873.1| hypothetical protein
CARUB_v10025845mg [Capsella rubella]
Length = 919
Score = 166 bits (421), Expect(4) = 4e-85
Identities = 107/291 (36%), Positives = 152/291 (52%), Gaps = 8/291 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC-----LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLCK 1937
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEFW 247
Query: 1936 VEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDR-TAKVDFVRYSSNRIKS 1760
+ TF W + FDY A +Y C + TA V V + R K
Sbjct: 248 TINCSHQSEEGIATFNWM-----RGHLFDYASAVILYEMCVEEPTATVMNVPHPRERFKY 302
Query: 1759 PPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIV 1580
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D + RT L +V
Sbjct: 303 PPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDAFS--SRTDLRAMV 360
Query: 1579 QQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
++Q H +WGA L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 EEQTRHPEWGAYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDHL 417
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 NVYELVVRHYLACVSQPAVAAETTVEIDISGERFSASGRAILAKNYLEVYR 468
Score = 86.7 bits (213), Expect(4) = 4e-85
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 488 PTSLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 547
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 548 TNLGEALVMGYDDMGYE---LWKPNLRAIMEHDMNEVSVGRKTKAEVLE-------TCLQ 597
Query: 780 VTFGCF 763
CF
Sbjct: 598 QMKACF 603
Score = 77.8 bits (190), Expect(4) = 4e-85
Identities = 53/153 (34%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ +R GNF+V C+N C WLP T+EA+V+ C C
Sbjct: 639 VRRCNLCNESDMALRK-NRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPG- 696
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRS--- 387
V + KF + IP + NHLGCV C + L +CG G+ SQ R+
Sbjct: 697 ------PVYKILFKFRQIGIPPGFEVNHLGCVGGCDGILKQLIDICGTGSRSQARRAPDT 750
Query: 386 -------SPNGRCVN-CGHLETSSHRSVTCSAR 312
N R N C H + H S C +R
Sbjct: 751 VPPNNIRGSNTRQSNVCIHCQQRGHASSNCPSR 783
Score = 57.8 bits (138), Expect(4) = 4e-85
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARKSDWLVLWLDCDREGENIAFEVVDVCRAVKHNLF---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDREIHEAVQNLRDPNQLFAEAVDARQEIDLRIGASF 193
>gb|KFK28084.1| hypothetical protein AALP_AA8G470200 [Arabis alpina]
Length = 924
Score = 162 bits (409), Expect(4) = 5e-85
Identities = 108/297 (36%), Positives = 154/297 (51%), Gaps = 14/297 (4%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC--------LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSG 1946
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLKDRFSIDSTGPGGEERSRVISYGPCQFPTLGFIVERYWEIQAHEP- 246
Query: 1945 LCKVEGTYITTHGSS---CTFYWECLSPGADNGFDYTIAENVYRRCYDR-TAKVDFVRYS 1778
+ T +H S TF W + FDY A +Y C TA V V +
Sbjct: 247 --EEFWTINCSHDSQEGLATFNWM-----RGHLFDYASAVILYEMCVQEPTATVMNVPHP 299
Query: 1777 SNRIKSPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRT 1598
+ K PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT
Sbjct: 300 REKFKYPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRT 357
Query: 1597 YLHEIVQQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAY 1424
L +V++Q H WG L E GL N NGGH D AH PI+PT + E+
Sbjct: 358 DLRAMVEEQTRHPAWGPYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESN 414
Query: 1423 WTADQRLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
W+ D VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 415 WSRDHLNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYR 471
Score = 88.2 bits (217), Expect(4) = 5e-85
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 491 PTRLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 550
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G++ K EVL+ TC Q
Sbjct: 551 TNLGEALVMGYDDMGYE---LWKPNLRALMEHDMNEVSVGSKTKAEVLE-------TCLQ 600
Query: 780 VTFGCF 763
CF
Sbjct: 601 QMKACF 606
Score = 79.7 bits (195), Expect(4) = 5e-85
Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ ++ GNF+V C++ C WLP T+EA V+ C C
Sbjct: 642 VRRCNLCHESDMALRK-NQAGNFMVGCMSYPQCRNAVWLPGPTLEAAVTTDVCQSC---- 696
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRSSPN 378
GLV + KF + IP + NHLGCV C + L +CG G+ SQ R++P
Sbjct: 697 --GPGLVYK-IRFKFRQIGIPPGFDINHLGCVGGCDDILKQLIDICGTGSRSQ-ARTAPG 752
Query: 377 GRCVN------------CGHLETSSHRSVTCSAR 312
G N C H + H S C +R
Sbjct: 753 GASANNFQGSNVRQNNACIHCQQRGHTSANCPSR 786
Score = 58.5 bits (140), Expect(4) = 5e-85
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARKSDWLVLWLDCDREGENIAFEVVDVCRAVKQNLY---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDREIHEAVQNLREPNQLFAQAVDARQEIDLRIGASF 193
>ref|XP_010674422.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Beta vulgaris subsp.
vulgaris]
Length = 930
Score = 172 bits (436), Expect(4) = 9e-85
Identities = 109/291 (37%), Positives = 158/291 (54%), Gaps = 8/291 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPCL-----KGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLCK 1937
RIGA+ +R QT+LL +AF + + YGPC FP LGFVV+ I+ ++
Sbjct: 186 RIGASFTRFQTMLLKDAFNFNFATDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEPEEFW 245
Query: 1936 VEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDRT-AKVDFVRYSSNRIKS 1760
+ + F W + FDYT A ++Y C + A V VR ++K
Sbjct: 246 TINCSHNSEEGTANFSWM-----RGHIFDYTCAVSIYEMCVEEPIATVTMVR-QQEKLKY 299
Query: 1759 PPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIV 1580
PP L+TIEL+K AS+Y M +TM+ + L+QSGFI+YPRT +D+ + RT LH IV
Sbjct: 300 PPYPLSTIELEKRASRYFRMSSEQTMKVAEELYQSGFISYPRTETDSFS--ARTDLHTIV 357
Query: 1579 QQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
Q+Q+ H WG+ L E L N +GGH D AH PI+PT + E+ W+ D
Sbjct: 358 QEQQAHPVWGSYAQRLLDPEAALWKNPGSGGHDDKAHPPIHPT---KFSAGESRWSQDHH 414
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRHFLA VS+PA + I + ++F+ + +++ N+L R
Sbjct: 415 KVYELVVRHFLACVSQPAVSAETTVEIDIAGELFSASGRVILSKNYLDIYR 465
Score = 87.4 bits (215), Expect(4) = 9e-85
Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P L L ++PPPL SE DLL M+K IGT+AT H+ ++D N F+P
Sbjct: 485 PTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAVKDANTRFSP 544
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+K + G + K E IL +C Q
Sbjct: 545 TNLGEALVMGYDDMGYE---LWKPYLRSKMEDDMKAVSLGIKRKIE-------ILASCLQ 594
Query: 780 VTFGCF 763
CF
Sbjct: 595 EMKACF 600
Score = 69.7 bits (169), Expect(4) = 9e-85
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = -2
Query: 761 ERYYGTSKCVYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDT 582
E + + V RC LCR+ VL++ G F+V CL C WLP EA V+
Sbjct: 627 EEQHAIGEVVRRCGLCRQADMVLKRKP-DGKFMVGCLGFPQCRNVVWLPGSISEAVVTSN 685
Query: 581 TCTDCFQSREGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEG 411
TC C + ++ KF +IP Y +HLGCV C T + LT +CG G
Sbjct: 686 TCNSCSPG-------PIFMIQFKFRRLEIPPNYSVDHLGCVGGCDDTLKQLTEICGTG 736
Score = 58.2 bits (139), Expect(4) = 9e-85
Identities = 35/98 (35%), Positives = 54/98 (55%)
Frame = -1
Query: 2376 TLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTPGSD 2197
TL++E + L+LWLD D +GENI F+ I+VC + NP + ++ R S
Sbjct: 105 TLQQEIRSCQWLILWLDCDREGENIAFEVIEVCAEVNPNL---NMWRARFSA-------- 153
Query: 2196 LTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P +S + AVD R+E+D + F
Sbjct: 154 LIDREIHEAVQNLDRPNQSFADAVDARQEIDLRIGASF 191
>ref|XP_010674423.1| PREDICTED: DNA topoisomerase 3-alpha isoform X2 [Beta vulgaris subsp.
vulgaris] gi|870862863|gb|KMT14051.1| hypothetical
protein BVRB_4g078790 [Beta vulgaris subsp. vulgaris]
Length = 918
Score = 172 bits (436), Expect(4) = 9e-85
Identities = 109/291 (37%), Positives = 158/291 (54%), Gaps = 8/291 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPCL-----KGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLCK 1937
RIGA+ +R QT+LL +AF + + YGPC FP LGFVV+ I+ ++
Sbjct: 186 RIGASFTRFQTMLLKDAFNFNFATDDRSLVLSYGPCQFPTLGFVVERYWEIQAHEPEEFW 245
Query: 1936 VEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDRT-AKVDFVRYSSNRIKS 1760
+ + F W + FDYT A ++Y C + A V VR ++K
Sbjct: 246 TINCSHNSEEGTANFSWM-----RGHIFDYTCAVSIYEMCVEEPIATVTMVR-QQEKLKY 299
Query: 1759 PPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIV 1580
PP L+TIEL+K AS+Y M +TM+ + L+QSGFI+YPRT +D+ + RT LH IV
Sbjct: 300 PPYPLSTIELEKRASRYFRMSSEQTMKVAEELYQSGFISYPRTETDSFS--ARTDLHTIV 357
Query: 1579 QQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
Q+Q+ H WG+ L E L N +GGH D AH PI+PT + E+ W+ D
Sbjct: 358 QEQQAHPVWGSYAQRLLDPEAALWKNPGSGGHDDKAHPPIHPT---KFSAGESRWSQDHH 414
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRHFLA VS+PA + I + ++F+ + +++ N+L R
Sbjct: 415 KVYELVVRHFLACVSQPAVSAETTVEIDIAGELFSASGRVILSKNYLDIYR 465
Score = 87.4 bits (215), Expect(4) = 9e-85
Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P L L ++PPPL SE DLL M+K IGT+AT H+ ++D N F+P
Sbjct: 485 PTTLTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAVKDANTRFSP 544
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+K + G + K E IL +C Q
Sbjct: 545 TNLGEALVMGYDDMGYE---LWKPYLRSKMEDDMKAVSLGIKRKIE-------ILASCLQ 594
Query: 780 VTFGCF 763
CF
Sbjct: 595 EMKACF 600
Score = 69.7 bits (169), Expect(4) = 9e-85
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = -2
Query: 761 ERYYGTSKCVYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDT 582
E + + V RC LCR+ VL++ G F+V CL C WLP EA V+
Sbjct: 627 EEQHAIGEVVRRCGLCRQADMVLKRKP-DGKFMVGCLGFPQCRNVVWLPGSISEAVVTSN 685
Query: 581 TCTDCFQSREGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEG 411
TC C + ++ KF +IP Y +HLGCV C T + LT +CG G
Sbjct: 686 TCNSCSPG-------PIFMIQFKFRRLEIPPNYSVDHLGCVGGCDDTLKQLTEICGTG 736
Score = 58.2 bits (139), Expect(4) = 9e-85
Identities = 35/98 (35%), Positives = 54/98 (55%)
Frame = -1
Query: 2376 TLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTPGSD 2197
TL++E + L+LWLD D +GENI F+ I+VC + NP + ++ R S
Sbjct: 105 TLQQEIRSCQWLILWLDCDREGENIAFEVIEVCAEVNPNL---NMWRARFSA-------- 153
Query: 2196 LTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P +S + AVD R+E+D + F
Sbjct: 154 LIDREIHEAVQNLDRPNQSFADAVDARQEIDLRIGASF 191
>ref|XP_006394227.1| hypothetical protein EUTSA_v10003618mg [Eutrema salsugineum]
gi|557090866|gb|ESQ31513.1| hypothetical protein
EUTSA_v10003618mg [Eutrema salsugineum]
Length = 930
Score = 159 bits (403), Expect(4) = 1e-84
Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 9/292 (3%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC------LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLC 1940
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLKDRFSIDSTGGEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEF 247
Query: 1939 KVEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCY-DRTAKVDFVRYSSNRIK 1763
+ TF W + FDY A +Y C + TA V V + + K
Sbjct: 248 WTINCSHESEEGLATFNWM-----RGHLFDYVSAVILYEMCVLEPTATVMNVPHPREKFK 302
Query: 1762 SPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEI 1583
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +
Sbjct: 303 YPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAM 360
Query: 1582 VQQQRNHRKWGADVLTHLSLETG--LNMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQ 1409
V++Q H WG L E G N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 VEEQTRHPAWGPYAQRLLEPEGGHWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDH 417
Query: 1408 RLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 LNVYELVVRHYLACVSQPAIAAETTVEIDIAGERFSASGRAILAKNYLEVYR 469
Score = 91.3 bits (225), Expect(4) = 1e-84
Identities = 52/126 (41%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL SE DLL M+K IGT+AT H+ +D N F+P
Sbjct: 489 PTRLTLDSAVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 548
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G++ K EVLQ TC Q
Sbjct: 549 TNLGEALVMGYDDMGYE---LWKPNLRAIMEHDMNEVSVGSKTKAEVLQ-------TCLQ 598
Query: 780 VTFGCF 763
CF
Sbjct: 599 QMKACF 604
Score = 77.8 bits (190), Expect(4) = 1e-84
Identities = 51/153 (33%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ +R GNF+V C++ C WLP T+EA+V+ C C +
Sbjct: 640 VRRCNLCHESDMALRK-NRDGNFMVGCMSYPQCRNAVWLPGPTLEASVTADVCQSCGPA- 697
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRSSPN 378
V + KF + IP + NHLGCV C + L +CG G+ SQ R++P
Sbjct: 698 ------PVYKIRFKFRQIGIPPGFDTNHLGCVGGCDDILKQLIDICGTGSRSQ-ARTAPG 750
Query: 377 GRCVN-----------CGHLETSSHRSVTCSAR 312
N C H + H S C +R
Sbjct: 751 ASSNNFQGGNIRQNNTCIHCQQRGHTSANCPSR 783
Score = 58.5 bits (140), Expect(4) = 1e-84
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARKSDWLVLWLDCDREGENIAFEVVDVCRAVKQNLF---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDREIHEAAQNLREPNQLFAQAVDARQEIDLRIGASF 193
>ref|XP_009130424.1| PREDICTED: DNA topoisomerase 3-alpha [Brassica rapa]
Length = 921
Score = 162 bits (410), Expect(4) = 1e-84
Identities = 105/292 (35%), Positives = 151/292 (51%), Gaps = 9/292 (3%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC------LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLC 1940
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLKDRFVIDSTGDEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEF 247
Query: 1939 KVEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCY-DRTAKVDFVRYSSNRIK 1763
+ TF W + FDY A +Y C + TA V V + + K
Sbjct: 248 WTINCSHESEEGLATFNWM-----RGHLFDYASAAILYEMCVLEPTATVMNVPHPREKFK 302
Query: 1762 SPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEI 1583
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +
Sbjct: 303 YPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAM 360
Query: 1582 VQQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQ 1409
V++Q H WG L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 VEEQTRHPAWGPYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDH 417
Query: 1408 RLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 LNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYR 469
Score = 87.8 bits (216), Expect(4) = 1e-84
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 489 PTRLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 548
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 549 TNLGEALVMGYDDMGYE---LWKPNLRAIMEHDMNEVSVGNKTKAEVLE-------TCLQ 598
Query: 780 VTFGCF 763
CF
Sbjct: 599 QMKACF 604
Score = 78.6 bits (192), Expect(4) = 1e-84
Identities = 51/153 (33%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ ++ GNF+V C++ C WLP T+EA+V+ TC C
Sbjct: 640 VRRCNLCHESDMALRK-NQDGNFMVGCMSYPQCRNAVWLPGPTLEASVTTDTCQSCGPG- 697
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRSSPN 378
V + KF + +IP + NHLGCV C + L +CG G+ SQ R++P
Sbjct: 698 ------PVYKIRFKFRQIRIPPGFDVNHLGCVGGCDDVLKQLIDICGTGSRSQ-ARAAPG 750
Query: 377 GRCVN-----------CGHLETSSHRSVTCSAR 312
N C H + H S C R
Sbjct: 751 ATPNNVRGSNIRQNNVCIHCQQGGHTSANCPTR 783
Score = 58.5 bits (140), Expect(4) = 1e-84
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARRSDWLVLWLDCDREGENIAFEVVDVCRAVKQNLY---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDREIHEAVQNLREPNQLFAQAVDARQEIDLRIGASF 193
>emb|CDY39837.1| BnaC02g42810D [Brassica napus]
Length = 924
Score = 162 bits (411), Expect(4) = 2e-84
Identities = 105/292 (35%), Positives = 151/292 (51%), Gaps = 9/292 (3%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC------LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLC 1940
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLKDRFSIDSTGDEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEF 247
Query: 1939 KVEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCY-DRTAKVDFVRYSSNRIK 1763
+ TF W + FDY A +Y C + TA V V + + K
Sbjct: 248 WTINCSHESEEGLATFNWM-----RGHLFDYASAAILYEMCVMEPTATVMNVPHPREKFK 302
Query: 1762 SPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEI 1583
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +
Sbjct: 303 YPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAM 360
Query: 1582 VQQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQ 1409
V++Q H WG L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 VEEQTRHPAWGPYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDH 417
Query: 1408 RLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 LNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYR 469
Score = 87.8 bits (216), Expect(4) = 2e-84
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 489 PTRLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 548
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 549 TNLGEALVMGYDDMGYE---LWKPNLRAIMEHDMNEVSVGNKTKAEVLE-------TCLQ 598
Query: 780 VTFGCF 763
CF
Sbjct: 599 QMKACF 604
Score = 77.4 bits (189), Expect(4) = 2e-84
Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Frame = -2
Query: 746 TSKCVYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDC 567
T + V RC+LC E+ LR+ ++ GNF+V C+ C WLP T+EA+V+ C C
Sbjct: 639 TGEVVRRCNLCNESDMALRK-NQDGNFMVGCMGYPQCRNAVWLPGPTLEASVTTDICQSC 697
Query: 566 FQSREGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTR 390
V + KF + +IP + NHLGC+ C + L +CG G+ SQ R
Sbjct: 698 GPG-------PVYKIRFKFRQIRIPPGFDVNHLGCIGGCDDVLKQLIDICGTGSRSQ-AR 749
Query: 389 SSPNGRCVN-----------CGHLETSSHRSVTCSAR 312
++P N C H + H S C R
Sbjct: 750 AAPGATPNNVRGSNIRQNNVCIHCQQGGHTSANCPTR 786
Score = 58.5 bits (140), Expect(4) = 2e-84
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARRSDWLVLWLDCDREGENIAFEVVDVCRAVKQNLY---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDREIHEAVQNLREPNQLFAQAVDARQEIDLRIGASF 193
>ref|XP_013616695.1| PREDICTED: DNA topoisomerase 3-alpha [Brassica oleracea var.
oleracea]
Length = 921
Score = 162 bits (411), Expect(4) = 2e-84
Identities = 105/292 (35%), Positives = 151/292 (51%), Gaps = 9/292 (3%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC------LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLC 1940
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLKDRFSIDSTGDEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEF 247
Query: 1939 KVEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCY-DRTAKVDFVRYSSNRIK 1763
+ TF W + FDY A +Y C + TA V V + + K
Sbjct: 248 WTINCSHESEEGLATFNWM-----RGHLFDYASAAILYEMCVMEPTATVMNVPHPREKFK 302
Query: 1762 SPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEI 1583
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +
Sbjct: 303 YPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAM 360
Query: 1582 VQQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQ 1409
V++Q H WG L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 VEEQTRHPAWGPYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDH 417
Query: 1408 RLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 LNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYR 469
Score = 87.8 bits (216), Expect(4) = 2e-84
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 489 PTRLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 548
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 549 TNLGEALVMGYDDMGYE---LWKPNLRAIMEHDMNEVSVGNKTKAEVLE-------TCLQ 598
Query: 780 VTFGCF 763
CF
Sbjct: 599 QMKACF 604
Score = 77.4 bits (189), Expect(4) = 2e-84
Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Frame = -2
Query: 746 TSKCVYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDC 567
T + V RC+LC E+ LR+ ++ GNF+V C+ C WLP T+EA+V+ C C
Sbjct: 636 TGEVVRRCNLCNESDMALRK-NQDGNFMVGCMGYPQCRNAVWLPGPTLEASVTTDICQSC 694
Query: 566 FQSREGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTR 390
V + KF + +IP + NHLGC+ C + L +CG G+ SQ R
Sbjct: 695 GPG-------PVYKIRFKFRQIRIPPGFDVNHLGCIGGCDDVLKQLIDICGTGSRSQ-AR 746
Query: 389 SSPNGRCVN-----------CGHLETSSHRSVTCSAR 312
++P N C H + H S C R
Sbjct: 747 AAPGATPNNVRGSNIRQNNVCIHCQQGGHTSANCPTR 783
Score = 58.5 bits (140), Expect(4) = 2e-84
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARRSDWLVLWLDCDREGENIAFEVVDVCRAVKQNLY---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDREIHEAVQNLREPNQLFAQAVDARQEIDLRIGASF 193
>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
Length = 923
Score = 167 bits (423), Expect(4) = 3e-84
Identities = 107/291 (36%), Positives = 154/291 (52%), Gaps = 8/291 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC-----LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLCK 1937
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEFW 247
Query: 1936 VEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDR-TAKVDFVRYSSNRIKS 1760
+ TF W + FDY A +Y C + TA V V + R K
Sbjct: 248 TINCSHQSEEGLATFNWM-----RGHLFDYASAVILYEMCVEEPTATVMNVPHPRERFKY 302
Query: 1759 PPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIV 1580
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +V
Sbjct: 303 PPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLCAMV 360
Query: 1579 QQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
++QR H WG+ L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 EEQRRHPAWGSYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDHL 417
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA+ + I + + F+ + ++ N+L R
Sbjct: 418 NVYELVVRHYLACVSQPAKAAETTVEIDIAGERFSASGRAILAKNYLEVYR 468
Score = 85.9 bits (211), Expect(4) = 3e-84
Identities = 50/126 (39%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 488 PTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 547
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E D+ + G + K EVL+ TC Q
Sbjct: 548 TNLGEALVMGYDDMGYE---LWKPNLRALMERDMNEVSVGRKTKAEVLE-------TCLQ 597
Query: 780 VTFGCF 763
CF
Sbjct: 598 QMKACF 603
Score = 76.3 bits (186), Expect(4) = 3e-84
Identities = 51/153 (33%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
+ RC+LC E+ LR+ +R GNF+V C+N C WLP T+EA+V+ C C
Sbjct: 639 IRRCNLCNESDMALRK-NRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTDVCQTCGPG- 696
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRS--- 387
V + KF + IP + NHLGC+ C + L +CG G+ SQ R+
Sbjct: 697 ------PVYKILFKFRQIGIPPGFDVNHLGCIGGCDDILKQLIDICGTGSRSQARRAPGT 750
Query: 386 -------SPNGRCVN-CGHLETSSHRSVTCSAR 312
N R N C H + H S C +R
Sbjct: 751 VPSNNIQGSNTRQGNFCIHCQQRGHASANCPSR 783
Score = 56.6 bits (135), Expect(4) = 3e-84
Identities = 36/101 (35%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARKSDWLVLWLDCDREGENIAFEVVDVCRAVKHNLF---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L ++I A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDRDIHEAVQNLRDPNQLFAEAVDARQEIDLRIGASF 193
>ref|XP_013701142.1| PREDICTED: DNA topoisomerase 3-alpha-like [Brassica napus]
Length = 921
Score = 162 bits (410), Expect(4) = 3e-84
Identities = 105/292 (35%), Positives = 151/292 (51%), Gaps = 9/292 (3%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC------LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLC 1940
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLKDRFVIDSTGDEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEF 247
Query: 1939 KVEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCY-DRTAKVDFVRYSSNRIK 1763
+ TF W + FDY A +Y C + TA V V + + K
Sbjct: 248 WTINCSHESEEGLATFSWM-----RGHLFDYASAAILYEMCVLEPTATVMNVPHPREKFK 302
Query: 1762 SPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEI 1583
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +
Sbjct: 303 YPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAM 360
Query: 1582 VQQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQ 1409
V++Q H WG L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 VEEQTRHPAWGPYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDH 417
Query: 1408 RLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 LNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYR 469
Score = 87.8 bits (216), Expect(4) = 3e-84
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 489 PTRLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 548
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 549 TNLGEALVMGYDDMGYE---LWKPNLRAIMEHDMNEVSVGNKTKAEVLE-------TCLQ 598
Query: 780 VTFGCF 763
CF
Sbjct: 599 QMKACF 604
Score = 77.8 bits (190), Expect(4) = 3e-84
Identities = 51/153 (33%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ ++ GNF+V C++ C WLP T+EA+V+ TC C
Sbjct: 640 VRRCNLCLESDMALRK-NQDGNFMVGCMSYPQCRNAVWLPGPTLEASVTTDTCQSCGPG- 697
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRSSPN 378
V + KF + +IP + NHLGCV C + L +CG G+ SQ R++P
Sbjct: 698 ------PVYKIRFKFRQIRIPPGFDVNHLGCVGGCDDVLKQLIDICGTGSRSQ-ARAAPG 750
Query: 377 GRCVN-----------CGHLETSSHRSVTCSAR 312
N C H + H S C R
Sbjct: 751 ATPNNVRGSNIRQNNVCIHCQQGGHTSANCPTR 783
Score = 58.2 bits (139), Expect(4) = 3e-84
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARRSDWLVLWLDCDREGENIAFEVVDVCRAVKQDLY---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDREIHEAVQNLREPNQLFAQAVDARQEIDLRIGASF 193
>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
gi|75180667|sp|Q9LVP1.1|TOP3A_ARATH RecName: Full=DNA
topoisomerase 3-alpha gi|8777305|dbj|BAA96895.1| DNA
topoisomerase III [Arabidopsis thaliana]
gi|169218912|gb|ACA50279.1| topoisomerase 3 alpha
[Arabidopsis thaliana] gi|332010433|gb|AED97816.1|
topoisomerase 3alpha [Arabidopsis thaliana]
Length = 926
Score = 164 bits (415), Expect(4) = 3e-84
Identities = 106/291 (36%), Positives = 152/291 (52%), Gaps = 8/291 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC-----LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLCK 1937
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLRDRFAIDSTGEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEFW 247
Query: 1936 VEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDR-TAKVDFVRYSSNRIKS 1760
+ TF W + FDY A +Y C + TA V V + R K
Sbjct: 248 TINCSHQSEEGLATFNWM-----RGHLFDYASAVILYEMCVEEPTATVMNVPHPRERFKY 302
Query: 1759 PPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIV 1580
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +V
Sbjct: 303 PPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAMV 360
Query: 1579 QQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
++Q H WG+ L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 EEQTRHPAWGSYAQRLLEPEGGLWRNPANGGHDDKAHPPIHPT---KFSSGESNWSRDHL 417
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 NVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYR 468
Score = 86.7 bits (213), Expect(4) = 3e-84
Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 488 PTTLTLDAAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 547
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 548 TNLGEALVMGYDDMGYE---LWKPNLRALMEHDMNEVSVGRKTKAEVLE-------TCLQ 597
Query: 780 VTFGCF 763
CF
Sbjct: 598 QMKACF 603
Score = 78.2 bits (191), Expect(4) = 3e-84
Identities = 53/153 (34%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ +R GNF+V C+N C WLP T+EA+V+ C C
Sbjct: 639 VRRCNLCNESDMALRK-NRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPG- 696
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRS--- 387
V + KF + IP + NHLGCV C + L +CG G+ SQ R+
Sbjct: 697 ------PVYKILFKFRQIGIPPGFDVNHLGCVGGCDDILKQLIDICGTGSRSQARRTPGT 750
Query: 386 -------SPNGRCVN-CGHLETSSHRSVTCSAR 312
N R N C H + H S C +R
Sbjct: 751 APSNNIQGSNTRQSNVCIHCQQRGHASTNCPSR 783
Score = 56.6 bits (135), Expect(4) = 3e-84
Identities = 36/101 (35%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARKSDWLVLWLDCDREGENIAFEVVDVCRAVKHNLF---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L ++I A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDRDIHEAVQNLRDPNQLFAEAVDARQEIDLRIGASF 193
>ref|XP_013678454.1| PREDICTED: DNA topoisomerase 3-alpha-like [Brassica napus]
Length = 921
Score = 162 bits (411), Expect(4) = 6e-84
Identities = 105/292 (35%), Positives = 151/292 (51%), Gaps = 9/292 (3%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC------LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLC 1940
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLKDRFSIDSTGDEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEF 247
Query: 1939 KVEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCY-DRTAKVDFVRYSSNRIK 1763
+ TF W + FDY A +Y C + TA V V + + K
Sbjct: 248 WTINCSHESEEGLATFNWM-----RGHLFDYASAAILYEMCVLEPTATVMNVPHPREKFK 302
Query: 1762 SPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEI 1583
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +
Sbjct: 303 YPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAM 360
Query: 1582 VQQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQ 1409
V++Q H WG L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 VEEQTGHPAWGPYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDH 417
Query: 1408 RLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 LNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYR 469
Score = 87.8 bits (216), Expect(4) = 6e-84
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 489 PTRLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 548
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 549 TNLGEALVMGYDDMGYE---LWKPNLRAIMEHDMNEVSVGNKTKAEVLE-------TCLQ 598
Query: 780 VTFGCF 763
CF
Sbjct: 599 QMKACF 604
Score = 76.3 bits (186), Expect(4) = 6e-84
Identities = 50/153 (32%), Positives = 71/153 (46%), Gaps = 12/153 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ ++ GNF+V C++ C WLP T+EA+V+ C C
Sbjct: 640 VRRCNLCHESDMALRK-NQDGNFMVGCMSYPQCRNAVWLPGPTLEASVTTDICQSCGPG- 697
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRSSPN 378
V + KF + +IP + NHLGCV C + L +CG G+ SQ R++P
Sbjct: 698 ------PVYKIRFKFRQIRIPPGFDVNHLGCVGGCDDVLKQLIDICGTGSRSQ-ARAAPG 750
Query: 377 GRCVN-----------CGHLETSSHRSVTCSAR 312
N C H + H S C R
Sbjct: 751 ATPNNVRGSNIRQNNVCIHCQQGGHTSANCPTR 783
Score = 58.2 bits (139), Expect(4) = 6e-84
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARRSDWLVLWLDCDREGENIAFEVVDVCRAVKQDLY---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDREIHEAVQNLREPNQLFAQAVDARQEIDLRIGASF 193
>emb|CDY31345.1| BnaA02g33960D [Brassica napus]
Length = 921
Score = 162 bits (410), Expect(4) = 1e-82
Identities = 105/292 (35%), Positives = 151/292 (51%), Gaps = 9/292 (3%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPC------LKGQQIIYGPCLFPALGFVVQHDNSIRLNDSGLC 1940
RIGA+ +R QT+LL + F + + I YGPC FP LGF+V+ I+ ++
Sbjct: 188 RIGASFTRFQTMLLKDRFVIDSTGDEERSRVISYGPCQFPTLGFIVERYWEIQAHEPEEF 247
Query: 1939 KVEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCY-DRTAKVDFVRYSSNRIK 1763
+ TF W + FDY A +Y C + TA V V + + K
Sbjct: 248 WTINCSHESEEGLATFNWM-----RGHLFDYASAAILYEMCVLEPTATVMNVPHPREKFK 302
Query: 1762 SPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEI 1583
PP LNTIEL+K AS+Y + TM+ + L+Q+GFI+YPRT +D+ + RT L +
Sbjct: 303 YPPYPLNTIELEKRASRYFRLSSEHTMKVAEELYQAGFISYPRTETDSFS--SRTDLRAM 360
Query: 1582 VQQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQ 1409
V++Q H WG L E GL N NGGH D AH PI+PT + E+ W+ D
Sbjct: 361 VEEQTRHPAWGPYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPT---KFSSGESNWSRDH 417
Query: 1408 RLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRH+LA VS+PA + I + + F+ + ++ N+L R
Sbjct: 418 LNVYELVVRHYLACVSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYR 469
Score = 87.8 bits (216), Expect(4) = 1e-82
Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL E DLL M+K IGT+AT H+ +D N F+P
Sbjct: 489 PTRLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSP 548
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY +MG E LWKP R +E+D+ + G + K EVL+ TC Q
Sbjct: 549 TNLGEALVMGYDDMGYE---LWKPNLRAIMEHDMNEVSVGNKTKAEVLE-------TCLQ 598
Query: 780 VTFGCF 763
CF
Sbjct: 599 QMKACF 604
Score = 71.6 bits (174), Expect(4) = 1e-82
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC+LC E+ LR+ ++ GNF+V C++ C WLP T+EA+V+ C C
Sbjct: 640 VRRCNLCHESDMALRK-NQDGNFMVGCMSYPQCRNAVWLPGPTLEASVTTDICQSCGPG- 697
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQ------- 399
V + KF + +IP + HLGCV C + L +CG G+ SQ
Sbjct: 698 ------PVYKIRFKFRQIRIPPGFDVIHLGCVGGCDDVLKQLIDICGTGSRSQARAAPGA 751
Query: 398 ---FTRSSPNGRCVNCGHLETSSHRSVTCSAR 312
+ R S + C H + H S C R
Sbjct: 752 TPNYVRGSNIRQNNVCIHCQQGGHTSANCPTR 783
Score = 58.5 bits (140), Expect(4) = 1e-82
Identities = 37/101 (36%), Positives = 53/101 (52%)
Frame = -1
Query: 2385 VVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTP 2206
+ TLEEEA +D LVLWLD D +GENI F+ + VC+ + I+R S
Sbjct: 104 IKKTLEEEARRSDWLVLWLDCDREGENIAFEVVDVCRAVKQNLY---IRRAHFSA----- 155
Query: 2205 GSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI A Q++ P + + AVD R+E+D + F
Sbjct: 156 ---LIDREIHEAVQNLREPNQLFAQAVDARQEIDLRIGASF 193
>gb|ERM96738.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
Length = 988
Score = 165 bits (417), Expect(4) = 5e-82
Identities = 111/292 (38%), Positives = 161/292 (55%), Gaps = 9/292 (3%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPCL-----KGQQIIYGPCLFPALGFVVQHDNSIRLND-SGLC 1940
RIGA+ +R QT+LL AF K + YGPC FP LGFVV+ I+ ++
Sbjct: 260 RIGASFTRFQTMLLKNAFVLNISDDDKNVIVSYGPCQFPTLGFVVERYWEIQAHEPEEFW 319
Query: 1939 KVEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDR-TAKVDFVRYSSNRIK 1763
+ ++ T G + TF W + FDY+ A +Y C + TA V V + R K
Sbjct: 320 TINCSHKTDEGIA-TFNWT-----RGHLFDYSCALIIYEMCVEEPTATVKKVSHQERR-K 372
Query: 1762 SPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEI 1583
PP L+T+ELQK AS+Y M TM+ + L+Q+GFI+YPRT +D+ +P T L +
Sbjct: 373 YPPHPLSTLELQKRASQYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSP--NTDLQAL 430
Query: 1582 VQQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQ 1409
V++Q+ H +WG+ LS E GL N ++GGH D AH PI+PT + E+ W+ D
Sbjct: 431 VREQQGHPEWGSYAQRLLSPE-GLWRNPSSGGHDDKAHPPIHPT---KFSAGESSWSPDH 486
Query: 1408 RLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
+YEL+VRHFLA VS+PA I + ++F + + +I N+L R
Sbjct: 487 HRLYELVVRHFLACVSQPAIGAGTTVEIDIAGEVFVASGLMIIEKNYLEVYR 538
Score = 89.0 bits (219), Expect(4) = 5e-82
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL SE DLL M+K IGT+AT H+ ++D N F+P
Sbjct: 558 PTRLTLDSSVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRFSP 617
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY MG + LWKP R +E+D+K + EG + K EV L +C Q
Sbjct: 618 TTLGEALVMGYDCMGWD---LWKPNLRSAMESDMKAVSEGRKTKSEV-------LASCLQ 667
Query: 780 VTFGCF 763
CF
Sbjct: 668 QMKDCF 673
Score = 63.5 bits (153), Expect(4) = 5e-82
Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 3/150 (2%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V C C+E+ VLR+ G+F+V CL C WLP EA V++ C C
Sbjct: 709 VRSCQQCQESEMVLRR-RPDGSFMVGCLRFPLCRNVVWLPGAISEALVTEHVCNVCNPE- 766
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAYSQFTRSSPN 378
V + KF +IP + HLGC+ C T R L +CG G + + S
Sbjct: 767 ------PVFKIQFKFRRMEIPPNFDTEHLGCIGGCDETLRELIQICGTGPRNLSSGSGTR 820
Query: 377 GRCVN--CGHLETSSHRSVTCSARRYDVHS 294
GR G + + V C+ R HS
Sbjct: 821 GRQPTQFSGSAQRRNTSQVVCARCRQSGHS 850
Score = 60.8 bits (146), Expect(4) = 5e-82
Identities = 39/98 (39%), Positives = 52/98 (53%)
Frame = -1
Query: 2376 TLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTPGSD 2197
TLEEEA LVLWLD D +GENI F+ ++VC +N DI R S
Sbjct: 179 TLEEEARTCQWLVLWLDCDREGENIAFEVVEVCTTAN---RNLDIWRAHFSA-------- 227
Query: 2196 LTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI +A Q++ P + S AVD R+E+D + F
Sbjct: 228 LIDREIRHAVQNLGRPNQLFSDAVDARQEIDLRIGASF 265
>ref|XP_011629125.1| PREDICTED: DNA topoisomerase 3-alpha [Amborella trichopoda]
Length = 907
Score = 165 bits (417), Expect(4) = 2e-81
Identities = 111/292 (38%), Positives = 161/292 (55%), Gaps = 9/292 (3%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAFPCL-----KGQQIIYGPCLFPALGFVVQHDNSIRLND-SGLC 1940
RIGA+ +R QT+LL AF K + YGPC FP LGFVV+ I+ ++
Sbjct: 184 RIGASFTRFQTMLLKNAFVLNISDDDKNVIVSYGPCQFPTLGFVVERYWEIQAHEPEEFW 243
Query: 1939 KVEGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDR-TAKVDFVRYSSNRIK 1763
+ ++ T G + TF W + FDY+ A +Y C + TA V V + R K
Sbjct: 244 TINCSHKTDEGIA-TFNWT-----RGHLFDYSCALIIYEMCVEEPTATVKKVSHQERR-K 296
Query: 1762 SPPPFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEI 1583
PP L+T+ELQK AS+Y M TM+ + L+Q+GFI+YPRT +D+ +P T L +
Sbjct: 297 YPPHPLSTLELQKRASQYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSP--NTDLQAL 354
Query: 1582 VQQQRNHRKWGADVLTHLSLETGL--NMNNGGHTDPAHSPIYPTMKVPTAREEAYWTADQ 1409
V++Q+ H +WG+ LS E GL N ++GGH D AH PI+PT + E+ W+ D
Sbjct: 355 VREQQGHPEWGSYAQRLLSPE-GLWRNPSSGGHDDKAHPPIHPT---KFSAGESSWSPDH 410
Query: 1408 RLVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
+YEL+VRHFLA VS+PA I + ++F + + +I N+L R
Sbjct: 411 HRLYELVVRHFLACVSQPAIGAGTTVEIDIAGEVFVASGLMIIEKNYLEVYR 462
Score = 89.0 bits (219), Expect(4) = 2e-81
Identities = 51/126 (40%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Frame = -1
Query: 1137 PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNATRHEXXXXXXXXXXXLRDRNMNFTP 961
P +L L ++PPPL SE DLL M+K IGT+AT H+ ++D N F+P
Sbjct: 482 PTRLTLDSSVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRFSP 541
Query: 960 TYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLKLIEEGTENKDEVLQRHKGILTTCFQ 781
T LG+AL+ GY MG + LWKP R +E+D+K + EG + K EV L +C Q
Sbjct: 542 TTLGEALVMGYDCMGWD---LWKPNLRSAMESDMKAVSEGRKTKSEV-------LASCLQ 591
Query: 780 VTFGCF 763
CF
Sbjct: 592 QMKDCF 597
Score = 61.6 bits (148), Expect(4) = 2e-81
Identities = 47/149 (31%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V C C+E+ VLR+ G+F+V CL C WLP EA V++ C C
Sbjct: 633 VRSCQQCQESEMVLRR-RPDGSFMVGCLRFPLCRNVVWLPGAISEALVTEHVCNVCNPE- 690
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV-RCSTTFRSLTVVCGEGAY--------S 402
V + KF +IP + HLGC+ C T R L +CG G +
Sbjct: 691 ------PVFKIQFKFRRMEIPPNFDTEHLGCIGGCDETLRELIQICGTGPRNLSSGRQPT 744
Query: 401 QFTRSSP--NGRCVNCGHLETSSHRSVTC 321
QF+ S+ N V C S H S C
Sbjct: 745 QFSGSAQRRNTSQVVCARCRQSGHSSNDC 773
Score = 60.8 bits (146), Expect(4) = 2e-81
Identities = 39/98 (39%), Positives = 52/98 (53%)
Frame = -1
Query: 2376 TLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDLTPGSD 2197
TLEEEA LVLWLD D +GENI F+ ++VC +N DI R S
Sbjct: 103 TLEEEARTCQWLVLWLDCDREGENIAFEVVEVCTTAN---RNLDIWRAHFSA-------- 151
Query: 2196 LTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
L +EI +A Q++ P + S AVD R+E+D + F
Sbjct: 152 LIDREIRHAVQNLGRPNQLFSDAVDARQEIDLRIGASF 189
>ref|XP_002985109.1| hypothetical protein SELMODRAFT_121488 [Selaginella moellendorffii]
gi|300147319|gb|EFJ13984.1| hypothetical protein
SELMODRAFT_121488 [Selaginella moellendorffii]
Length = 791
Score = 154 bits (389), Expect(4) = 2e-77
Identities = 102/291 (35%), Positives = 146/291 (50%), Gaps = 8/291 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAF--PCLKGQQII--YGPCLFPALGFVVQHDNSIRLNDSGLCKV 1934
RIGA+ +R QT+LL + F P + ++ I YGPC FP LGFVV+ ++ +
Sbjct: 182 RIGASFTRFQTMLLKDRFVLPFDEHEKAILSYGPCQFPTLGFVVERYWQVQAHQPEDFWT 241
Query: 1933 EGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDRTAKVDFVRYSSNRIKSPP 1754
+ S +F W + FDY A +Y C + F K+PP
Sbjct: 242 INCVYRSENDSASFKW-----ARGHLFDYVAAVAIYEMCVEEPLATVFSVTGRETRKNPP 296
Query: 1753 PFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIVQQ 1574
LNT+EL K AS++L + TM+A + L+Q GFI+YPRT +D + T L +V++
Sbjct: 297 HPLNTVELVKRASRFLRLGSQETMKAAEELYQQGFISYPRTETDYFSE--NTDLRRMVEE 354
Query: 1573 QRNHRKWGADVLTHLSLETGLNM----NNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
Q H WG H L++ N+ +NGGH D AH PI+PT + E W D +
Sbjct: 355 QTRHPVWGN--YAHRLLDSRENLWRHPSNGGHDDKAHPPIHPTR---FSDGEPQWRNDHK 409
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRHFLA VS+PA I + + F+ + V N+L R
Sbjct: 410 AVYELVVRHFLACVSQPAVGYATKAMIDIAGEQFSANGLMVTARNYLEVYR 460
Score = 90.5 bits (223), Expect(4) = 2e-77
Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Frame = -1
Query: 1185 FLRIYEKDH------PGFFMQQ---PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNA 1036
+L +Y ++ P F + Q P +L L ++PPPL SE DL+ +M+KE IGT+A
Sbjct: 455 YLEVYRYENWAASTLPNFDLGQQFIPTRLTLDAGRTQPPPLLSEADLIALMDKEGIGTDA 514
Query: 1035 TRHEXXXXXXXXXXXLRDRNMNFTPTYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLK 856
T H+ +D F PT LG+AL+ GY MG E LWKP R +E D+K
Sbjct: 515 TMHDHIKKLLDRRYATKDAQTRFCPTNLGEALVMGYDTMGYE---LWKPHLRSIMERDMK 571
Query: 855 LIEEGTENKDEVLQRHKGILTTCF-QVTFGCF*KILWYI 742
+ +G + K+ VL+ + TCF V F F +L+++
Sbjct: 572 AVGDGIKVKENVLETCLQQMKTCFLDVGFKAFQLLLYFL 610
Score = 62.0 bits (149), Expect(4) = 2e-77
Identities = 36/103 (34%), Positives = 56/103 (54%)
Frame = -1
Query: 2391 VAVVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDL 2212
+ + TLEE+A N LVLWLD D +GENI ++ ++VC + N G ++ R S
Sbjct: 96 LGIKRTLEEQARNCQWLVLWLDCDREGENIAYEVVEVCLNVN---RGLNVLRARFSA--- 149
Query: 2211 TPGSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
+EI +A Q++ P ++S AVD R+E+D + F
Sbjct: 150 -----FIEREIQHAAQNLHRPNRNLSDAVDARQEIDLRIGASF 187
Score = 55.8 bits (133), Expect(4) = 2e-77
Identities = 33/92 (35%), Positives = 43/92 (46%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC +CRE VL++ F+V C N C WLP+ +EATV+ TC C +
Sbjct: 634 VRRCPMCREADMVLKR-RPDSKFMVGCRNFPQCKNVVWLPSVVMEATVTTHTCNSCIPA- 691
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV 459
V + KF +IP Y H GCV
Sbjct: 692 ------PVYKIDFKFKRAEIPPQYSIYHTGCV 717
>ref|XP_002970788.1| hypothetical protein SELMODRAFT_94303 [Selaginella moellendorffii]
gi|300161499|gb|EFJ28114.1| hypothetical protein
SELMODRAFT_94303 [Selaginella moellendorffii]
Length = 794
Score = 152 bits (384), Expect(4) = 1e-76
Identities = 101/291 (34%), Positives = 145/291 (49%), Gaps = 8/291 (2%)
Frame = -3
Query: 2101 RIGAALSRAQTLLLPEAF--PCLKGQQII--YGPCLFPALGFVVQHDNSIRLNDSGLCKV 1934
RIGA+ +R QT+LL + F P + ++ I YGPC FP LGFVV+ ++ +
Sbjct: 182 RIGASFTRFQTMLLKDRFVLPFDEHEKAILSYGPCQFPTLGFVVERYWQVQAHQPEDFWT 241
Query: 1933 EGTYITTHGSSCTFYWECLSPGADNGFDYTIAENVYRRCYDRTAKVDFVRYSSNRIKSPP 1754
+ S +F W + FDY A ++Y C + F K+PP
Sbjct: 242 INCVYRSENDSASFKWT-----RGHLFDYVAAVSIYEMCVEEPLATVFSVTGRETRKNPP 296
Query: 1753 PFLNTIELQKLASKYLLMDCNRTMEAVQFLHQSGFITYPRTSSDTIAPCMRTYLHEIVQQ 1574
LNT+EL K AS++L TM+A + L+Q GFI+YPRT +D + T L +V++
Sbjct: 297 HPLNTVELVKRASRFLRFGSQETMKAAEELYQQGFISYPRTETDYFSE--NTDLRRMVEE 354
Query: 1573 QRNHRKWGADVLTHLSLETGLNM----NNGGHTDPAHSPIYPTMKVPTAREEAYWTADQR 1406
Q H WG H ++ N+ +NGGH D AH PI+PT + E W D +
Sbjct: 355 QTRHPVWGN--YAHRLVDPRENLWRHPSNGGHDDKAHPPIHPTR---FSDGEPQWRNDHK 409
Query: 1405 LVYELIVRHFLASVSKPAEVQQAYTRIRLGNDIFNGTTMKVITPNFLVFLR 1253
VYEL+VRHFLA VS+PA I + + F+ + V N+L R
Sbjct: 410 AVYELVVRHFLACVSQPAVGYATKAMIDIAGEQFSANGLMVTARNYLEVYR 460
Score = 90.5 bits (223), Expect(4) = 1e-76
Identities = 57/161 (35%), Positives = 81/161 (50%), Gaps = 10/161 (6%)
Frame = -1
Query: 1185 FLRIYEKDH------PGFFMQQ---PVKLDLRIVASKPPPL-SEGDLLDVMEKENIGTNA 1036
+L +Y ++ P F + Q P +L L ++PPPL SE DL+ +M+KE IGT+A
Sbjct: 455 YLEVYRYENWAASTLPNFDLGQQFIPTRLTLDAGRTQPPPLLSEADLIALMDKEGIGTDA 514
Query: 1035 TRHEXXXXXXXXXXXLRDRNMNFTPTYLGKALITGYIEMGAEVEPLWKPQYRQNLENDLK 856
T H+ +D F PT LG+AL+ GY MG E LWKP R +E D+K
Sbjct: 515 TMHDHIKKLLDRRYATKDAQTRFCPTNLGEALVMGYDTMGYE---LWKPHLRSIMERDMK 571
Query: 855 LIEEGTENKDEVLQRHKGILTTCFQVTFGCF*KILWYIEMR 733
+ +G + K+ VL+ TC Q CF W +R
Sbjct: 572 AVSDGIKVKENVLE-------TCLQQMKTCFLDRQWVFSLR 605
Score = 62.0 bits (149), Expect(4) = 1e-76
Identities = 36/103 (34%), Positives = 56/103 (54%)
Frame = -1
Query: 2391 VAVVSTLEEEASNTDELVLWLDRDPQGENITFDAIKVCKDSNPLITGKDIKRIMISGSDL 2212
+ + TLEE+A N LVLWLD D +GENI ++ ++VC + N G ++ R S
Sbjct: 96 LGIKRTLEEQARNCQWLVLWLDCDREGENIAYEVVEVCLNVN---RGLNVLRARFSA--- 149
Query: 2211 TPGSDLTRKEIMNAWQHMVVPEESVSFAVDVRKELDFELELRF 2083
+EI +A Q++ P ++S AVD R+E+D + F
Sbjct: 150 -----FIEREIQHAAQNLHRPNRNLSDAVDARQEIDLRIGASF 187
Score = 55.5 bits (132), Expect(4) = 1e-76
Identities = 33/92 (35%), Positives = 43/92 (46%)
Frame = -2
Query: 734 VYRCHLCRETFRVLRQTHRHGNFIVKCLNDKYCDGHEWLPNCTIEATVSDTTCTDCFQSR 555
V RC +CRE VL++ F+V C N C WLP+ +EATV+ TC C +
Sbjct: 637 VRRCPMCREADMVLKR-RPDSKFMVGCRNFPQCKNVVWLPSVVMEATVTAHTCNSCIPA- 694
Query: 554 EGREGLVVNLVSAKFDEEKIPRIYRDNHLGCV 459
V + KF +IP Y H GCV
Sbjct: 695 ------PVYKIDFKFKRAEIPPQYSIYHTGCV 720