BLASTX nr result

ID: Papaver30_contig00030345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00030345
         (1683 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624064.1| F-box protein interaction domain protein [Me...    60   8e-06

>ref|XP_003624064.1| F-box protein interaction domain protein [Medicago truncatula]
            gi|355499079|gb|AES80282.1| F-box protein interaction
            domain protein [Medicago truncatula]
          Length = 433

 Score = 59.7 bits (143), Expect = 8e-06
 Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 11/229 (4%)
 Frame = -3

Query: 1564 LTSGILPNEIFITEVLARLPILNLFRL-CRSKALKNLIFNDTKFISLH-SAMDVPSRGFI 1391
            L+    PN++ ITE+ + LP+ ++ R  C S +   LI +D  F+ LH    +  +  F+
Sbjct: 5    LSPVFFPNDL-ITEIFSVLPVKSVLRFRCVSNSCNTLI-SDPTFVKLHLKRSETRNPHFL 62

Query: 1390 CLAESYTEVEIKSGERKEDLINDFLKSSGLSFYDVDDSV-NRSFTFGTE----LIGRRLH 1226
             + +   E+  +S    ED   D+   SG+  Y +   + N SFT        +I     
Sbjct: 63   LITDHTIEINGESPYGSED---DYKIDSGVIPYSIRSLIHNLSFTLSVNPYYLVIKGWTR 119

Query: 1225 ICGSHNGLVLLS--SFEGHGRCFSYYIYNPMSRVAVQLPYINDLFEGPFDNLQNYYWGDI 1052
            + GS NGL+ L+  SF G  R + + ++NP +R     P + + F     + +   W D 
Sbjct: 120  VIGSCNGLICLTDDSFNGEYRDYWFRLWNPATRTT--SPILGNFFIFHNYSPEKPDWFDG 177

Query: 1051 LPDVYLVFDQQIQKYKVIRVCCLQNSYGQR--RYTFHIVTVGENAWREL 911
                    D     YKV+        Y QR  R    I+++G+N WR++
Sbjct: 178  YYKFSFGCDNSTSTYKVVAA-----RYNQRELRSNVRILSLGDNVWRDI 221


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