BLASTX nr result

ID: Papaver30_contig00030075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00030075
         (1204 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009113788.1| PREDICTED: F-box/kelch-repeat protein At3g04...    60   5e-06

>ref|XP_009113788.1| PREDICTED: F-box/kelch-repeat protein At3g04660-like [Brassica rapa]
          Length = 387

 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 4/214 (1%)
 Frame = -1

Query: 1123 YTLQCQVFCMKKFEDGNDSGVFEHADDLEEVGADEEQVCEVFTIG-ENKWRRIDAVPPYS 947
            Y + C    +K+     +     +A   E++ ++E QV    T+G + KWR I+   P+ 
Sbjct: 165  YKVLCMTVVLKRSHMSRNG----NAVPWEDIVSEEHQV---ITLGAKEKWRMIECKYPH- 216

Query: 946  LASKVCYVGELGHYNEESKAVYVRGKIYWRFRYTRKGEVMMVFDVRTEKFKVISIPEHVT 767
                         +N   K +Y  G +Y+   Y +KG +M  FD+ +E+F V  +PE   
Sbjct: 217  ------------RHNSGCKGIYKDGFMYYLATYQKKGSLMS-FDLSSEEFNVTKLPE--- 260

Query: 766  RSPKKYPQTVELLEVDGHIAVLKFTPDCPISLWILNQDDGTDKWSYEKVRTP--CDWSG- 596
               +  PQ+ EL+   G I +     +  + LW+L +D   + WS   V  P   D+ G 
Sbjct: 261  --DQMLPQSGELVNHAGKITIAHQAYNRNVDLWVL-EDANKEVWSNFFVVPPLSIDFFGR 317

Query: 595  IRDLSIEAISGTNVIIMKREMSETIYVYFRDRKT 494
             RDL    I GT  +I     S   +    D K+
Sbjct: 318  FRDLVFMGILGTGEMIFASRSSPPFFFVCFDPKS 351


Top