BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00028857
         (3965 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010277399.1| PREDICTED: cleavage and polyadenylation spec...  2015   0.0  
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...  1979   0.0  
emb|CBI24510.3| unnamed protein product [Vitis vinifera]             1973   0.0  
ref|XP_008234350.1| PREDICTED: cleavage and polyadenylation spec...  1953   0.0  
ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prun...  1951   0.0  
ref|XP_007038473.1| Cleavage and polyadenylation specificity fac...  1931   0.0  
ref|XP_008343710.1| PREDICTED: cleavage and polyadenylation spec...  1917   0.0  
ref|XP_009374536.1| PREDICTED: cleavage and polyadenylation spec...  1912   0.0  
ref|XP_012484368.1| PREDICTED: cleavage and polyadenylation spec...  1902   0.0  
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec...  1902   0.0  
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr...  1898   0.0  
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec...  1897   0.0  
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr...  1893   0.0  
ref|XP_014512842.1| PREDICTED: cleavage and polyadenylation spec...  1892   0.0  
ref|XP_008791964.1| PREDICTED: cleavage and polyadenylation spec...  1890   0.0  
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...  1890   0.0  
ref|XP_012090388.1| PREDICTED: cleavage and polyadenylation spec...  1887   0.0  
ref|XP_014512849.1| PREDICTED: cleavage and polyadenylation spec...  1885   0.0  
ref|XP_008791963.1| PREDICTED: cleavage and polyadenylation spec...  1885   0.0  
ref|XP_010918168.1| PREDICTED: cleavage and polyadenylation spec...  1883   0.0  

>ref|XP_010277399.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Nelumbo nucifera]
          Length = 1457

 Score = 2015 bits (5221), Expect = 0.0
 Identities = 1008/1349 (74%), Positives = 1131/1349 (83%), Gaps = 28/1349 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRGG- 3789
            VY+VRV EED+     S S  E KRGG MAGLSGASLELVC YKL GNVETMAVLS GG 
Sbjct: 68   VYVVRVQEEDNRS---SRSSTEAKRGGVMAGLSGASLELVCSYKLHGNVETMAVLSMGGG 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S++RDSIILAF DAKISVLEFDDSI GL  SSMHCFEGPEW YL+RGRESFARGP+VK
Sbjct: 125  DGSRKRDSIILAFQDAKISVLEFDDSIHGLCISSMHCFEGPEWHYLKRGRESFARGPIVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL + L+MIILK+AQA               T  AR+ESSYVISLR+LDMK
Sbjct: 185  VDPQGRCGGVLVYDLQMIILKSAQAGYGFAGDDEASGSGSTISARVESSYVISLRDLDMK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF+F+HGYIEP MVILHERELTWAGRVSWKHHTCM+ ALSI+TT KQHPLIWSA+NL
Sbjct: 245  HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMVSALSISTTLKQHPLIWSAVNL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLVI +N IHYHSQ  SC LALN+FAVP D SQ++PRSSF+VEL
Sbjct: 305  PHDAYKLLAVPSPIGGVLVIGSNTIHYHSQSVSCVLALNNFAVPLDSSQDIPRSSFNVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWLL DVA+LSTKTGELLLLTLV DGRVVQRLELSK +ASVLTSGI TIG+SFFF
Sbjct: 365  DAANATWLLHDVAILSTKTGELLLLTLVYDGRVVQRLELSKSKASVLTSGITTIGNSFFF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQYT G+GT+ +TSGHVKEEVGDIE DAPS KRLR + S+ LQDI  GEE
Sbjct: 425  LGSRLGDSLLVQYTCGMGTSTTTSGHVKEEVGDIETDAPSVKRLRRSPSDPLQDIVGGEE 484

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SAPN SE  QK FSF VRDSLINVGPLKDF+YGLR+NADPNA GI+KQSNYELVC
Sbjct: 485  LSLYGSAPNNSESVQKIFSFTVRDSLINVGPLKDFSYGLRLNADPNATGIAKQSNYELVC 544

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LCVLQQ++RPE+ITEVELPGCKGIWTVYHK+TRGH           DEYHA
Sbjct: 545  CSGHGKNGALCVLQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNSDSSKMVSEDDEYHA 604

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+S+TMVLETAD LGEVTE+V YY+ GST+ AGNLFGRRRV+Q++ARGAR+LDGS
Sbjct: 605  YLIISLESRTMVLETADLLGEVTETVEYYVLGSTVTAGNLFGRRRVVQIFARGARVLDGS 664

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            YMTQ++SLG              V S +IADPYVLLRM+DGSIQLL+GDPS+        
Sbjct: 665  YMTQDISLGSPNPGSSSGSDNLTVSSASIADPYVLLRMSDGSIQLLIGDPSTCTVSVTVP 724

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTG+GEAIDG DGA  DQGDIYC+VC
Sbjct: 725  AVFESLKESISACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGADGAPSDQGDIYCLVC 784

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI--KVMKE 1698
            YESGTLEIF+VP+F CVFSVDKF+SGK+HLVDT  G  S DP  ++NKNS+++  KV KE
Sbjct: 785  YESGTLEIFEVPSFKCVFSVDKFVSGKTHLVDTVIGEPSKDPHVSRNKNSDEMAGKVKKE 844

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            +  NMKVVELAMQ+W GQHTRPFLFG+LTDGT+ CYHA+LYEG +N+ K EEA       
Sbjct: 845  NVLNMKVVELAMQRWLGQHTRPFLFGILTDGTVFCYHAFLYEGSENSLKTEEATSLQNSV 904

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF RVPLE+YTR+E+S     QR+T+FKNVGGYQGLF+SGSRPAWFM
Sbjct: 905  SLSSISTSRLRNLRFVRVPLESYTREETSGLSTCQRITIFKNVGGYQGLFVSGSRPAWFM 964

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            +CRERLR+HPQLCDGS+VAFTVLHNVNCNHGLIYVTSQGFLKICQLPS+ SYDNYWPVQK
Sbjct: 965  ICRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSVSSYDNYWPVQK 1024

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPL+ TPHQVTYF+EKNLYPLIVSIPV KPLNQVLSSLVD +  +Q +HD + PDEL ++
Sbjct: 1025 IPLKATPHQVTYFAEKNLYPLIVSIPVVKPLNQVLSSLVDQEGGHQIDHDGLSPDELHRT 1084

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            YT++EFEVRI+EPEKSGGPWQT+ TIPMQ+ E+ALTVRMVTLFNTTTKENETL+A+GTAY
Sbjct: 1085 YTVDEFEVRIMEPEKSGGPWQTKVTIPMQSCESALTVRMVTLFNTTTKENETLLAIGTAY 1144

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVAARGR+LL+SIG N +N Q LV+EVYSKELKGAISALASLQGHLL+ASGPK+IL
Sbjct: 1145 VQGEDVAARGRVLLFSIGRNTDNPQNLVSEVYSKELKGAISALASLQGHLLIASGPKIIL 1204

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            HKWTGTELNGVAF D  PL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQLNLLAKDFG
Sbjct: 1205 HKWTGTELNGVAFFDA-PLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLNLLAKDFG 1263

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
             LDCF+TEFLIDG+TLSLVV+D+QKN+QIFYYAPKMSESWKG KLLSRAEFH+GAHVTKF
Sbjct: 1264 NLDCFATEFLIDGTTLSLVVSDDQKNVQIFYYAPKMSESWKGHKLLSRAEFHVGAHVTKF 1323

Query: 257  LRLQMLP-ASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDA 90
            LRLQMLP +SDRT A   S    RFALLFGTLDGSIGC+APLDEL FRRLQTLQR+L+DA
Sbjct: 1324 LRLQMLPTSSDRTTAAPSSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQTLQRKLIDA 1383

Query: 89   VPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            VPH+ GLNP+AFRQFHS G+AH+PGP+N+
Sbjct: 1384 VPHVAGLNPRAFRQFHSNGKAHRPGPENI 1412


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Vitis vinifera]
            gi|731423119|ref|XP_010662374.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 1 isoform X1
            [Vitis vinifera]
          Length = 1442

 Score = 1979 bits (5128), Expect = 0.0
 Identities = 1002/1349 (74%), Positives = 1133/1349 (83%), Gaps = 28/1349 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVL-SRGG 3789
            VY+VRV +EDDS+ +++S+  E KRGG MAG+SGA+LELVC Y+L GNVETM VL S GG
Sbjct: 68   VYMVRV-QEDDSRESRASA--ETKRGGVMAGISGAALELVCQYRLHGNVETMTVLPSGGG 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIILAF DAKISVLEFDDSI GLRTSSMHCFEGPEW +L+RG ESFARGPLVK
Sbjct: 125  DNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFARGPLVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRCSGVL +GL+MIILKA+QA                  AR+ESSYVISLR+LDMK
Sbjct: 185  VDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLRDLDMK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 245  HVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLL VPS +GGV+VISAN+IHYHSQ  SCALALN++AV AD SQE+PRSSFSVEL
Sbjct: 305  PHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPRSSFSVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWL  DVAMLSTKTGELLLLTL  DGRVV RL+LSK RASVLTSGIA IG+S FF
Sbjct: 365  DAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVLTSGIAAIGNSLFF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+TS +      S  VKEEVGDIEGD PSAKRLR +SS+ LQD+ +GEE
Sbjct: 425  LGSRLGDSLLVQFTSIL------SSSVKEEVGDIEGDVPSAKRLRKSSSDALQDMVNGEE 478

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SAPN +E  QK+FSF+VRDS INVGPLKDFAYGLRINADP A GI+KQSNYELVC
Sbjct: 479  LSLYGSAPNSTETSQKTFSFSVRDSFINVGPLKDFAYGLRINADPKATGIAKQSNYELVC 538

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LC+LQQ++RPE+ITEVELPGCKGIWTVYHK+TRGH           DEYHA
Sbjct: 539  CSGHGKNGALCILQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNADSTKMATKDDEYHA 598

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+S+TMVLETAD LGEVTESV YY++G TI+AGNLFGRRRV+QVYARGARILDG+
Sbjct: 599  YLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRVVQVYARGARILDGA 658

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            +MTQ+L +               VLSV+IADPYVLLRM+DG+IQLLVGDPS+        
Sbjct: 659  FMTQDLPISESST----------VLSVSIADPYVLLRMSDGNIQLLVGDPSTCTVSINIP 708

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTG+GEAIDG DGA  DQGDIYCVV 
Sbjct: 709  AVFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGADGAAQDQGDIYCVVS 768

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI--KVMKE 1698
            YESG LEIFDVP FNCVFSVDKF+SG +HLVDT     S D QK  +KNSE+   +  KE
Sbjct: 769  YESGDLEIFDVPNFNCVFSVDKFMSGNAHLVDTLILEPSEDTQKVMSKNSEEEADQGRKE 828

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            +A N+KVVELAMQ+WSGQH+RPFLFG+LTDGT+LCYHAYLYEG ++TPK EEAV      
Sbjct: 829  NAHNIKVVELAMQRWSGQHSRPFLFGILTDGTILCYHAYLYEGPESTPKTEEAVSAQNSL 888

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF RVPL+TYTR+E+ S   S RMT+FKN+GG QGLFLSGSRP WFM
Sbjct: 889  SISNVSASRLRNLRFVRVPLDTYTREEALSGTTSPRMTVFKNIGGCQGLFLSGSRPLWFM 948

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RER+R+HPQLCDGS+VAFTVLHN+NCNHGLIYVTSQGFLKICQLP++ SYDNYWPVQK
Sbjct: 949  VFRERIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQLPAVSSYDNYWPVQK 1008

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPL+GTPHQVTYF+EKNLYPLIVS+PV KPLN VLSSLVD +A +Q E+DN+  DEL +S
Sbjct: 1009 IPLKGTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSSDELHRS 1068

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            Y+++EFEVR+LEPEKSG PWQTRATIPMQ++ENALTVR+VTLFNTTTKENETL+A+GTAY
Sbjct: 1069 YSVDEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAY 1128

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVAARGR+LL+S+G N +NSQ LV+E+YSKELKGAISA+ASLQGHLL+ASGPK+IL
Sbjct: 1129 VQGEDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLIASGPKIIL 1188

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            HKWTGTELNGVAF D PPL+VVSLNIVKNFIL+GDIH+SIYFLSWKEQGAQLNLLAKDFG
Sbjct: 1189 HKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQLNLLAKDFG 1248

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
            +LDCF+TEFLIDGSTLSL+V+D+QKNIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTKF
Sbjct: 1249 SLDCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKF 1308

Query: 257  LRLQMLPA-SDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDA 90
            LRLQMLPA SDRT AT GS    RFALLFGTLDGSIGC+APLDEL FRRLQ+LQ++LVDA
Sbjct: 1309 LRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDA 1368

Query: 89   VPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            VPH+ GLNP++FRQF S G+AH+PGPDN+
Sbjct: 1369 VPHVAGLNPRSFRQFRSNGKAHRPGPDNI 1397


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score = 1973 bits (5111), Expect = 0.0
 Identities = 1002/1355 (73%), Positives = 1133/1355 (83%), Gaps = 34/1355 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVL-SRGG 3789
            VY+VRV +EDDS+ +++S+  E KRGG MAG+SGA+LELVC Y+L GNVETM VL S GG
Sbjct: 68   VYMVRV-QEDDSRESRASA--ETKRGGVMAGISGAALELVCQYRLHGNVETMTVLPSGGG 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIILAF DAKISVLEFDDSI GLRTSSMHCFEGPEW +L+RG ESFARGPLVK
Sbjct: 125  DNSRRRDSIILAFQDAKISVLEFDDSIHGLRTSSMHCFEGPEWFHLKRGHESFARGPLVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRCSGVL +GL+MIILKA+QA                  AR+ESSYVISLR+LDMK
Sbjct: 185  VDPQGRCSGVLVYGLQMIILKASQAGYGLVGDEEALSSGSAVSARVESSYVISLRDLDMK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 245  HVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLL VPS +GGV+VISAN+IHYHSQ  SCALALN++AV AD SQE+PRSSFSVEL
Sbjct: 305  PHDAYKLLPVPSPIGGVVVISANSIHYHSQSASCALALNNYAVSADNSQEMPRSSFSVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWL  DVAMLSTKTGELLLLTL  DGRVV RL+LSK RASVLTSGIA IG+S FF
Sbjct: 365  DAANATWLSNDVAMLSTKTGELLLLTLAYDGRVVHRLDLSKSRASVLTSGIAAIGNSLFF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+TS +      S  VKEEVGDIEGD PSAKRLR +SS+ LQD+ +GEE
Sbjct: 425  LGSRLGDSLLVQFTSIL------SSSVKEEVGDIEGDVPSAKRLRKSSSDALQDMVNGEE 478

Query: 2708 LSLFSSAPNMSELPQ------KSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQS 2547
            LSL+ SAPN +E  Q      K+FSF+VRDS INVGPLKDFAYGLRINADP A GI+KQS
Sbjct: 479  LSLYGSAPNSTETSQVEAQVGKTFSFSVRDSFINVGPLKDFAYGLRINADPKATGIAKQS 538

Query: 2546 NYELVCCSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXX 2367
            NYELVCCSGHGKNG+LC+LQQ++RPE+ITEVELPGCKGIWTVYHK+TRGH          
Sbjct: 539  NYELVCCSGHGKNGALCILQQSIRPEMITEVELPGCKGIWTVYHKNTRGHNADSTKMATK 598

Query: 2366 XDEYHAYLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGA 2187
             DEYHAYLIISL+S+TMVLETAD LGEVTESV YY++G TI+AGNLFGRRRV+QVYARGA
Sbjct: 599  DDEYHAYLIISLESRTMVLETADLLGEVTESVDYYVQGCTISAGNLFGRRRVVQVYARGA 658

Query: 2186 RILDGSYMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXX 2007
            RILDG++MTQ+L +               VLSV+IADPYVLLRM+DG+IQLLVGDPS+  
Sbjct: 659  RILDGAFMTQDLPISESST----------VLSVSIADPYVLLRMSDGNIQLLVGDPSTCT 708

Query: 2006 XXXXXXXXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGD 1890
                                             TSTDAWLSTG+GEAIDG DGA  DQGD
Sbjct: 709  VSINIPAVFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGADGAAQDQGD 768

Query: 1889 IYCVVCYESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI- 1713
            IYCVV YESG LEIFDVP FNCVFSVDKF+SG +HLVDT     S D QK  +KNSE+  
Sbjct: 769  IYCVVSYESGDLEIFDVPNFNCVFSVDKFMSGNAHLVDTLILEPSEDTQKVMSKNSEEEA 828

Query: 1712 -KVMKEDAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAV 1536
             +  KE+A N+KVVELAMQ+WSGQH+RPFLFG+LTDGT+LCYHAYLYEG ++TPK EEAV
Sbjct: 829  DQGRKENAHNIKVVELAMQRWSGQHSRPFLFGILTDGTILCYHAYLYEGPESTPKTEEAV 888

Query: 1535 XXXXXXXXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGS 1356
                               RF RVPL+TYTR+E+ S   S RMT+FKN+GG QGLFLSGS
Sbjct: 889  SAQNSLSISNVSASRLRNLRFVRVPLDTYTREEALSGTTSPRMTVFKNIGGCQGLFLSGS 948

Query: 1355 RPAWFMVCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDN 1176
            RP WFMV RER+R+HPQLCDGS+VAFTVLHN+NCNHGLIYVTSQGFLKICQLP++ SYDN
Sbjct: 949  RPLWFMVFRERIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQLPAVSSYDN 1008

Query: 1175 YWPVQKIPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGP 996
            YWPVQKIPL+GTPHQVTYF+EKNLYPLIVS+PV KPLN VLSSLVD +A +Q E+DN+  
Sbjct: 1009 YWPVQKIPLKGTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSS 1068

Query: 995  DELQKSYTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLM 816
            DEL +SY+++EFEVR+LEPEKSG PWQTRATIPMQ++ENALTVR+VTLFNTTTKENETL+
Sbjct: 1069 DELHRSYSVDEFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLL 1128

Query: 815  AVGTAYVQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLAS 636
            A+GTAYVQGEDVAARGR+LL+S+G N +NSQ LV+E+YSKELKGAISA+ASLQGHLL+AS
Sbjct: 1129 AIGTAYVQGEDVAARGRVLLFSVGKNTDNSQNLVSEIYSKELKGAISAVASLQGHLLIAS 1188

Query: 635  GPKVILHKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNL 456
            GPK+ILHKWTGTELNGVAF D PPL+VVSLNIVKNFIL+GDIH+SIYFLSWKEQGAQLNL
Sbjct: 1189 GPKIILHKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHRSIYFLSWKEQGAQLNL 1248

Query: 455  LAKDFGTLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIG 276
            LAKDFG+LDCF+TEFLIDGSTLSL+V+D+QKNIQIFYYAPKMSESWKGQKLLSRAEFH+G
Sbjct: 1249 LAKDFGSLDCFATEFLIDGSTLSLIVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVG 1308

Query: 275  AHVTKFLRLQMLPA-SDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQ 108
            AHVTKFLRLQMLPA SDRT AT GS    RFALLFGTLDGSIGC+APLDEL FRRLQ+LQ
Sbjct: 1309 AHVTKFLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQ 1368

Query: 107  RRLVDAVPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            ++LVDAVPH+ GLNP++FRQF S G+AH+PGPDN+
Sbjct: 1369 KKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDNI 1403


>ref|XP_008234350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Prunus mume]
          Length = 1459

 Score = 1953 bits (5059), Expect = 0.0
 Identities = 981/1349 (72%), Positives = 1114/1349 (82%), Gaps = 28/1349 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRGG- 3789
            VY+VRV EED ++G ++S   EPKRGG M G+SGASLELVCHY+L GNV TMAVLS GG 
Sbjct: 69   VYVVRVQEEDGTRGPRASG--EPKRGGLMDGVSGASLELVCHYRLHGNVVTMAVLSSGGG 126

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIIL F DAKISVLEFDDSI GLRTSSMHCFEGPEW +LRRGRESFARGPLVK
Sbjct: 127  DGSRRRDSIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRESFARGPLVK 186

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC  +L +GL+MIILKA+Q               G   ARIESSY+++LR++DMK
Sbjct: 187  VDPQGRCGSILVYGLQMIILKASQGGSGLVGDDDSFGSGGAISARIESSYIVNLRDMDMK 246

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF FLHGYIEP MVILHE+ELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 247  HVKDFTFLHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNL 306

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLVISAN+IHYHSQ  SCALALN +AV AD SQE+PRSSF VEL
Sbjct: 307  PHDAYKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAVSADNSQEVPRSSFPVEL 366

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWLL DVA+LSTKTGELLLLTLV DGRVVQRL+LSK +ASVLTSGI  +G+S FF
Sbjct: 367  DAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGITKVGNSLFF 426

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+T GVG +  +S  +K+EVGDIEGDAPSAKRLR++SS+ LQD+ SGEE
Sbjct: 427  LGSRLGDSLLVQFTCGVGGSVLSSD-MKDEVGDIEGDAPSAKRLRMSSSDALQDMVSGEE 485

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SAPN +E  QKSFSFAVRDSLINVGPLKDF+YGLRINAD NA GI+KQSNYELVC
Sbjct: 486  LSLYGSAPNNAESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVC 545

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LCVL+Q++RPE+ITEVELPGCKGIWTVYHK+ RGH           DEYHA
Sbjct: 546  CSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKNARGHNADSSKIAASDDEYHA 605

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV Y+++G TIAAGNLFGRRRV+QVY RGARILDGS
Sbjct: 606  YLIISLEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVVQVYERGARILDGS 665

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPS--------- 2016
            +MTQ+LS G              VLSV+I DPYVLLRM+DG I+LLVGDPS         
Sbjct: 666  FMTQDLSFGTSNSEMGTGSESSTVLSVSIVDPYVLLRMSDGGIRLLVGDPSLCTVSISIP 725

Query: 2015 ------------SXXXXXXXXXXXXXXTSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTG+ EAIDG DG  HDQGD+YCVVC
Sbjct: 726  AAFESSTKSISACTLYHDKGPEPWLRKTSTDAWLSTGIDEAIDGADGVSHDQGDVYCVVC 785

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI--KVMKE 1698
            YESG+LEIFDVP FNCVFSVDKF+SG +HLVD        DPQK  NK+SE++  +  KE
Sbjct: 786  YESGSLEIFDVPNFNCVFSVDKFVSGNAHLVDALMRDPPKDPQKLINKSSEEVSGQGRKE 845

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            + QNMKVVELAMQ+W GQH+RPFLFG+L DG +LCYHAYL+E  +   K E++       
Sbjct: 846  NIQNMKVVELAMQRWLGQHSRPFLFGILNDGMILCYHAYLFEDPETASKTEDSASAQNTA 905

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF RVPL+TY ++++S+    QRMT+FKN+ GYQGLFLSGSRPAWFM
Sbjct: 906  GVSNLNASRLRNLRFVRVPLDTYAKKDTSNETSCQRMTIFKNIAGYQGLFLSGSRPAWFM 965

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RERLRIHPQLCDGSVVA TVLHNVNCNHGLIYVTSQG LKICQLP + SYDNYWPVQK
Sbjct: 966  VFRERLRIHPQLCDGSVVAVTVLHNVNCNHGLIYVTSQGILKICQLPPITSYDNYWPVQK 1025

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPL+GTPHQVTYF+EKNLYPLIVS+PV KPLNQVLSSLVD +  +Q E+ N+  DEL ++
Sbjct: 1026 IPLKGTPHQVTYFAEKNLYPLIVSVPVHKPLNQVLSSLVDQEVGHQVENHNLSSDELHRT 1085

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            Y+++EFE+RI+EP+KSGGPWQT+ATIPMQ +ENALTVR+VTLFNTTTKENETL+A+GTAY
Sbjct: 1086 YSVDEFEIRIMEPDKSGGPWQTKATIPMQTSENALTVRVVTLFNTTTKENETLLAIGTAY 1145

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVA RGR+LL+S G +A+N+Q LV+EVYSKELKGAISALASLQGHLL+ASGPK+IL
Sbjct: 1146 VQGEDVAGRGRVLLFSAGKSADNTQTLVSEVYSKELKGAISALASLQGHLLIASGPKIIL 1205

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            HKW GTELNGVAF D PPL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQL+LLAKDFG
Sbjct: 1206 HKWNGTELNGVAFFDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFG 1265

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
             LDCF+TEFLIDGSTLSLVV DEQKNIQIFYYAPKMSESWKGQKLLSRAEFH+G HVTKF
Sbjct: 1266 NLDCFATEFLIDGSTLSLVVADEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGTHVTKF 1325

Query: 257  LRLQML-PASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDA 90
            LRLQML  +SDRTG   GS    R+ALLFGTLDGSIGC+APLDEL FRRLQ+LQ++LVDA
Sbjct: 1326 LRLQMLSTSSDRTGTNPGSDKTNRYALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDA 1385

Query: 89   VPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            VPH+ GLNP+AFRQF S G+AH+PGPD +
Sbjct: 1386 VPHVAGLNPRAFRQFRSNGKAHRPGPDTI 1414


>ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
            gi|462416772|gb|EMJ21509.1| hypothetical protein
            PRUPE_ppa000211mg [Prunus persica]
          Length = 1459

 Score = 1951 bits (5055), Expect = 0.0
 Identities = 978/1349 (72%), Positives = 1113/1349 (82%), Gaps = 28/1349 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRGG- 3789
            VY+VRV EED ++G ++S   EPKRGG M G+SGASLELVCHY+L GNV TMAVLS GG 
Sbjct: 69   VYVVRVQEEDGTRGPRASG--EPKRGGLMDGVSGASLELVCHYRLHGNVVTMAVLSSGGG 126

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIIL F DAKISVLEFDDSI GLRTSSMHCFEGPEW +LRRGRESFARGPLVK
Sbjct: 127  DGSRRRDSIILTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRESFARGPLVK 186

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC  +L +GL+MIILKA+Q               G   +RIESSY+++LR++DMK
Sbjct: 187  VDPQGRCGSILVYGLQMIILKASQGGSGLVGDDDSFGSGGAISSRIESSYIVNLRDMDMK 246

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF FLHGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 247  HVKDFTFLHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNL 306

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLVISAN+IHYHSQ  SCALALN +AV AD SQE+PRSSF+VEL
Sbjct: 307  PHDAYKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAVSADNSQEMPRSSFTVEL 366

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            D ANATWLL DVA+LSTKTGELLLLTLV DGRVVQRL+LSK +ASVLTSGI  +G+S FF
Sbjct: 367  DTANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGITKVGNSLFF 426

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+T GVG +  +S  +K+EVGDIEGDAP AKRLR++SS+ LQD+ SGEE
Sbjct: 427  LGSRLGDSLLVQFTCGVGGSVLSSD-MKDEVGDIEGDAPLAKRLRMSSSDALQDMVSGEE 485

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SAPN +E  QKSFSFAVRDSLINVGPLKDF+YGLRINAD NA GI+KQSNYELVC
Sbjct: 486  LSLYGSAPNNAESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVC 545

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LCVL+Q++RPE+ITEVELPGCKGIWTVYHK+ RGH           DE+HA
Sbjct: 546  CSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKNARGHNADSSKIAASDDEFHA 605

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV Y+++G TIAAGNLFGRRRV+QVY RGARILDGS
Sbjct: 606  YLIISLEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVVQVYERGARILDGS 665

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPS--------- 2016
            +MTQ+LS G              VLSV+I DPYVLLRM+DG I+LLVGDPS         
Sbjct: 666  FMTQDLSFGTSNSEMGSGSESSTVLSVSIVDPYVLLRMSDGGIRLLVGDPSLCTVSTSIP 725

Query: 2015 ------------SXXXXXXXXXXXXXXTSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTG+ EAIDG DG  HDQGD+YCVVC
Sbjct: 726  AAFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSTGIDEAIDGADGVSHDQGDVYCVVC 785

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVM--KE 1698
            YESG+LEIFDVP FNCVFSVDKF+SG +HL+DT       DPQK  NK+SE++     KE
Sbjct: 786  YESGSLEIFDVPNFNCVFSVDKFVSGNAHLIDTLMRDPPKDPQKLINKSSEEVSGQGRKE 845

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            + QNMKVVELAMQ+WSGQH+RPFLFG+L DG +LCYHAYL+EG +   K E++       
Sbjct: 846  NIQNMKVVELAMQRWSGQHSRPFLFGILNDGMILCYHAYLFEGPETASKTEDSASAQNTT 905

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF RVPL+TY ++++S+    QRMT+FKN+ GYQGLFLSGSRPAWFM
Sbjct: 906  GVSNLSASRLRNLRFVRVPLDTYAKKDTSNETSCQRMTIFKNIAGYQGLFLSGSRPAWFM 965

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RERLRIHPQLCDGSVVA TVLHNVNCNHGLIYVTSQG LKICQLP + SYDNYWPVQK
Sbjct: 966  VFRERLRIHPQLCDGSVVAVTVLHNVNCNHGLIYVTSQGILKICQLPPITSYDNYWPVQK 1025

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPL+GTPHQVTYF+EKNLYPLIVS+PV KPLNQVLSSLVD +  +Q E+ N+  DEL ++
Sbjct: 1026 IPLKGTPHQVTYFAEKNLYPLIVSVPVHKPLNQVLSSLVDQEVGHQVENHNLSSDELHRT 1085

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            Y+++EFE+RI+EP+KSGGPWQT+ATIPMQ +ENALTVR+VTLFNTTTKENETL+A+GTAY
Sbjct: 1086 YSVDEFEIRIMEPDKSGGPWQTKATIPMQTSENALTVRVVTLFNTTTKENETLLAIGTAY 1145

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVA RGR+LL+S G +A+N+Q LV+EVYSKELKGAISALASLQGHLL+ASGPK+IL
Sbjct: 1146 VQGEDVAGRGRVLLFSAGKSADNTQTLVSEVYSKELKGAISALASLQGHLLIASGPKIIL 1205

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            HKW GTELNGVAF D PPL+VVSLNIVKNFIL+GD+HKSIYFLSWKEQGAQL LLAKDFG
Sbjct: 1206 HKWNGTELNGVAFFDVPPLYVVSLNIVKNFILLGDVHKSIYFLSWKEQGAQLTLLAKDFG 1265

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
             LDCF+TEFLIDGSTLSLVV DEQKNIQIFYYAPKMSESWKGQKLLSRAEFH+G HVTKF
Sbjct: 1266 NLDCFATEFLIDGSTLSLVVADEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGTHVTKF 1325

Query: 257  LRLQML-PASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDA 90
            LRLQML  +SDRTG   GS    R+ALLFGTLDGSIGC+APLDEL FRRLQ+LQ++LVDA
Sbjct: 1326 LRLQMLSTSSDRTGTNPGSDKTNRYALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDA 1385

Query: 89   VPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            V H+ GLNP+AFRQF S G+AH+PGPD +
Sbjct: 1386 VHHVAGLNPRAFRQFQSNGKAHRPGPDTI 1414


>ref|XP_007038473.1| Cleavage and polyadenylation specificity factor 160 isoform 1
            [Theobroma cacao] gi|508775718|gb|EOY22974.1| Cleavage
            and polyadenylation specificity factor 160 isoform 1
            [Theobroma cacao]
          Length = 1457

 Score = 1931 bits (5003), Expect = 0.0
 Identities = 966/1349 (71%), Positives = 1119/1349 (82%), Gaps = 28/1349 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLS-RGG 3789
            +Y+VRV EE   +   S+   E KRGG + G+SG SLELVC+Y+L GNVE+MAVLS  GG
Sbjct: 68   IYVVRVQEEGRREARNST---EVKRGGVLDGVSGVSLELVCNYRLHGNVESMAVLSIGGG 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIILAF DAKISVLEFDDSI GLRT+SMHCFEGPEW +L+RGRESFARGPLVK
Sbjct: 125  DGSRRRDSIILAFKDAKISVLEFDDSIHGLRTTSMHCFEGPEWLHLKRGRESFARGPLVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL + L+MIILKA+QA              G   AR+ESSY+I+LR+LD+K
Sbjct: 185  VDPQGRCGGVLVYDLQMIILKASQAGSGFVGEDDAFGSGGAVSARVESSYIINLRDLDVK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            H+KDF+F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 245  HIKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLVISAN IHYHSQ  SCALALN++A+  D SQ+LPRS+FSVEL
Sbjct: 305  PHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNNYAISVDNSQDLPRSNFSVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWLL DVA+LSTKTGELLLLTL+ DGRVVQRL+LSK +ASVLTS I TIG+S FF
Sbjct: 365  DAANATWLLNDVALLSTKTGELLLLTLIYDGRVVQRLDLSKSKASVLTSDITTIGNSLFF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ++ G G +A  SG +KEEVGDIEGD P AKRLR +SS+ LQD+  GEE
Sbjct: 425  LGSRLGDSLLVQFSGGSGVSALPSG-LKEEVGDIEGDVPLAKRLRRSSSDALQDMVGGEE 483

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SAPN +E  QK+F FAVRDSL NVGPLKDF+YGLRINAD NA GI+KQSNYELVC
Sbjct: 484  LSLYGSAPNNTESAQKTFLFAVRDSLTNVGPLKDFSYGLRINADVNATGIAKQSNYELVC 543

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LCVL+Q++RPE+ITEVEL GCKGIWTVYHKSTR H           DEYHA
Sbjct: 544  CSGHGKNGALCVLRQSIRPEMITEVELTGCKGIWTVYHKSTRSHSADLSKVTDDDDEYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV YY++G TIAAGNLFGRRRV+QVY RGARILDGS
Sbjct: 604  YLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVVQVYERGARILDGS 663

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            +MTQELS+               V+SV+IADPYVLLRMTDGSI LLVGDP++        
Sbjct: 664  FMTQELSIPSPNSESSPGSENSTVISVSIADPYVLLRMTDGSILLLVGDPATCTVSINTP 723

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                        STDAWLSTGVGE+IDG DG  HDQGDIYCVVC
Sbjct: 724  TAFEGSKKMVSACTLYHDKGPEPWLRKASTDAWLSTGVGESIDGADGGPHDQGDIYCVVC 783

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI--KVMKE 1698
            YESG LEIFDVP FNCVFS++KF SG++ LVD +T   S D +K  NK+SE++  +  KE
Sbjct: 784  YESGALEIFDVPNFNCVFSMEKFASGRTRLVDAYTLESSKDSEKVINKSSEELTGQGRKE 843

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            + QN+KVVELAMQ+WS  H+RPFLFG+LTDGT+LCYHAYL+EG +N  K+E++V      
Sbjct: 844  NVQNLKVVELAMQRWSANHSRPFLFGILTDGTILCYHAYLFEGSENASKVEDSVVAQNSV 903

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF R+PL+ YTR+E S+   SQR+T+FKN+ GYQG FLSGSRPAWFM
Sbjct: 904  GLSNINASRLRNLRFIRIPLDAYTREEMSNGTLSQRITIFKNISGYQGFFLSGSRPAWFM 963

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RERLR+HPQLCDGS+VAFTVLHNVNCNHG IYVTSQG LKICQ+PS  +YDNYWPVQK
Sbjct: 964  VFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQIPSASNYDNYWPVQK 1023

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPLRGTPHQVTYF+E+NLYP+IVS+PV KP+NQVLSSLVD +  +Q ++ N+  DELQ++
Sbjct: 1024 IPLRGTPHQVTYFAERNLYPIIVSVPVHKPVNQVLSSLVDQEVGHQMDNHNLSSDELQRT 1083

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            YT++EFEVRILEPEKSGGPW+T+ATIPMQ++ENALTVR+VTLFNTTTKENE+L+A+GTAY
Sbjct: 1084 YTVDEFEVRILEPEKSGGPWETKATIPMQSSENALTVRVVTLFNTTTKENESLLAIGTAY 1143

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            +QGEDVAARGR++L SIG N +N Q LV+EVYSKELKGAISALASLQGHLL+ASGPK+IL
Sbjct: 1144 IQGEDVAARGRVILCSIGRNTDNLQNLVSEVYSKELKGAISALASLQGHLLIASGPKIIL 1203

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            H WTG+ELNG+AF+D PPL+VVSLNIVKNFIL+GD+HKSIYFLSWKEQGAQL+LLAKDFG
Sbjct: 1204 HNWTGSELNGIAFYDAPPLYVVSLNIVKNFILLGDVHKSIYFLSWKEQGAQLSLLAKDFG 1263

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
            +LDCF+TEFLIDGSTLSL+V+DEQKNIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTKF
Sbjct: 1264 SLDCFATEFLIDGSTLSLMVSDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKF 1323

Query: 257  LRLQML-PASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDA 90
            LRLQML  +SDRT AT GS    RFALLFGTLDGSIGC+APLDEL FRRLQ+LQ++LVDA
Sbjct: 1324 LRLQMLSTSSDRTSATAGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDA 1383

Query: 89   VPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            VPH+ GLNP++FRQFHS G+AH+PGPD++
Sbjct: 1384 VPHVAGLNPRSFRQFHSNGKAHRPGPDSI 1412


>ref|XP_008343710.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like isoform X1 [Malus domestica]
            gi|658016721|ref|XP_008343711.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 1-like isoform
            X2 [Malus domestica]
          Length = 1450

 Score = 1917 bits (4966), Expect = 0.0
 Identities = 964/1345 (71%), Positives = 1105/1345 (82%), Gaps = 24/1345 (1%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRGG- 3789
            VY+VRV EED ++G+++S   EPKRGG M G+SGASLELVCHY++ GNV TMAVLS GG 
Sbjct: 69   VYVVRVQEEDGARGSRASG--EPKRGGLMDGVSGASLELVCHYRMHGNVVTMAVLSGGGG 126

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSI+L F DAKISVLEFDDSI GLRTSSMHCFEGPEW +LRRGRESFARGPLVK
Sbjct: 127  DGSRRRDSIVLTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRESFARGPLVK 186

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL +G +MIILKAAQ               G   AR++SSY+++L ++DMK
Sbjct: 187  VDPQGRCGGVLVYGFQMIILKAAQGGSGLVGEDDGFGSGGAISARVDSSYIVNLGDMDMK 246

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF F+HGYIEP MVILHE+ELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+N 
Sbjct: 247  HVKDFTFVHGYIEPVMVILHEQELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNX 306

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHD+ KLLAVPS +GGVLVISAN+IHYHSQ  SCALALN +AV  D SQE+PRSSF+VEL
Sbjct: 307  PHDSCKLLAVPSPIGGVLVISANSIHYHSQSASCALALNSYAVSVDSSQEMPRSSFTVEL 366

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWLL DVA+LSTKTGELLLLTLV DGRVVQRL+LSK +ASVLTSGI T+G+S FF
Sbjct: 367  DAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGITTLGNSLFF 426

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+T G G +  +SG +K+EVGDIEGD PSAKRLRL+SS+ LQD+ SGEE
Sbjct: 427  LGSRLGDSLLVQFTCGGGGSMLSSG-LKDEVGDIEGDIPSAKRLRLSSSDALQDMVSGEE 485

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSLF SAPN ++  QKSFSFAVRDSLINVGPLKDF+YGLRINAD NA GI+KQSNYELVC
Sbjct: 486  LSLFGSAPNSADSAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVC 545

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+L VL+Q++ PE+ITEVELPGCKGIWTVYHK+ RGH            EYHA
Sbjct: 546  CSGHGKNGALSVLRQSINPEMITEVELPGCKGIWTVYHKNARGHNADSKIAASDD-EYHA 604

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV Y+++G TIAAGNLFGRRRV+QVY RGARILDGS
Sbjct: 605  YLIISLEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVVQVYERGARILDGS 664

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            +MT+++S G              VLSV+I DPYVLLRM+DG I+LL+GDPSS        
Sbjct: 665  FMTKDISFGTLNAESATGSEST-VLSVSIVDPYVLLRMSDGGIRLLIGDPSSCTVSVSIP 723

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                        STDAWLSTGV EAIDG+DG +HDQGDIYCVVC
Sbjct: 724  AAFENLKKQISACTLYHDKGPEPWLRKASTDAWLSTGVDEAIDGSDGLLHDQGDIYCVVC 783

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVM--KE 1698
            YESG+LEIFDVP FNCVFSVDKF+SGK+HLVDT     S D QK  NK+SE++     KE
Sbjct: 784  YESGSLEIFDVPNFNCVFSVDKFVSGKTHLVDTLMQDPSKDSQKLINKSSEEVSGQGRKE 843

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            + ++MKVVELAMQ+WSGQH+RPFLFG+L DG +LCYHAYL+EG + T K E++       
Sbjct: 844  NIEDMKVVELAMQRWSGQHSRPFLFGILNDGMILCYHAYLFEGPETTSKTEDSASAQSTS 903

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RFARVPL+TY R++ S+    QRMT+FKN+ GYQGLFLSGSRPAW M
Sbjct: 904  GLTNVSASRLRNLRFARVPLDTYARKDMSTETSCQRMTIFKNIAGYQGLFLSGSRPAWLM 963

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RERLR+HPQLCDGSVVAFTVLHNVNCNHGLIYVTSQG LKICQLP + SYDNYWPVQK
Sbjct: 964  VFRERLRVHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGILKICQLPPISSYDNYWPVQK 1023

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPL+GTPHQVTYF+EKNLYPLIVS+PV KPLNQ+LSSLVD +A +Q E+ N+  DEL ++
Sbjct: 1024 IPLKGTPHQVTYFAEKNLYPLIVSVPVHKPLNQILSSLVDQEAGHQVENHNLSSDELHRT 1083

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            YT++EFEVRI+EPEKSGGPWQT+ATIPMQ +ENALTVR+VTLFNTTT ENETL+A+GTAY
Sbjct: 1084 YTVDEFEVRIMEPEKSGGPWQTKATIPMQTSENALTVRVVTLFNTTTNENETLIAIGTAY 1143

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVAARGR+LL+S G+N +N   LV+EVY+KE KGAISALASLQGHLL+A GPK+ L
Sbjct: 1144 VQGEDVAARGRVLLFSAGNNTQN---LVSEVYAKEFKGAISALASLQGHLLIAQGPKITL 1200

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            +KW GTELNGVAF D PPL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQG+QLNLLAKDFG
Sbjct: 1201 NKWNGTELNGVAFFDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGSQLNLLAKDFG 1260

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
             LDCF+TEFLIDGSTLSLVV DEQKNIQIF+YAPKMSESWKGQKLLSRAEFH+G HVTKF
Sbjct: 1261 NLDCFATEFLIDGSTLSLVVADEQKNIQIFFYAPKMSESWKGQKLLSRAEFHVGTHVTKF 1320

Query: 257  LRLQMLPASDRTGATTGSGRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDAVPHM 78
            LRLQML  S     +  + R+ALLFGTLDGSIGCVAPLDEL FRRLQ+LQ++LVDAV H+
Sbjct: 1321 LRLQMLSTSGTNPGSDKTNRYALLFGTLDGSIGCVAPLDELTFRRLQSLQKKLVDAVAHV 1380

Query: 77   GGLNPKAFRQFHSKGRAHKPGPDNM 3
             GLNP+AFRQF S G+AH+PGPD +
Sbjct: 1381 AGLNPRAFRQFRSNGKAHRPGPDTI 1405


>ref|XP_009374536.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Pyrus x bretschneideri]
            gi|694398760|ref|XP_009374537.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 1 isoform X2
            [Pyrus x bretschneideri]
          Length = 1447

 Score = 1912 bits (4952), Expect = 0.0
 Identities = 962/1345 (71%), Positives = 1104/1345 (82%), Gaps = 24/1345 (1%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRGG- 3789
            VY+VRV EE+ ++G+++S   EPKRGG M G+SGASLELVCHY++ GNV TMAVLS GG 
Sbjct: 69   VYVVRVQEEEGARGSRASG--EPKRGGLMDGVSGASLELVCHYRMHGNVVTMAVLSGGGG 126

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSI+L F DAKISVLEFDDSI GLRTSSMHCFEGPEW +LRRGRESFARGPLVK
Sbjct: 127  DGSRRRDSIVLTFEDAKISVLEFDDSIHGLRTSSMHCFEGPEWLHLRRGRESFARGPLVK 186

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL +G +MIILKAAQ               G   AR++SSY+++L ++DMK
Sbjct: 187  VDPQGRCGGVLVYGFQMIILKAAQGGSGLVGEDDGFGSGGAISARVDSSYIVNLGDMDMK 246

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 247  HVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNL 306

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHD+YKLLAVPS +GGVLVISAN+IHYHSQ  SCALALN +AV  D SQE+PRSSF+VEL
Sbjct: 307  PHDSYKLLAVPSPIGGVLVISANSIHYHSQSASCALALNGYAVSVDSSQEMPRSSFTVEL 366

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWLL DVA+LSTKTGELLLLTLV DGRVVQRL+LSK +ASVLTSGI T+G+S FF
Sbjct: 367  DAANATWLLNDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSGITTLGNSLFF 426

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+T G G+  S+   +K+EVGDIEGD PSAKRLRL+SS+ LQD+ SGEE
Sbjct: 427  LGSRLGDSLLVQFTCGGGSMLSSG--LKDEVGDIEGDIPSAKRLRLSSSDALQDMVSGEE 484

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSLF SAPN ++  QKSFSFAVRDSLINVGPLKDF+YGLRINAD NA GI+KQSNYELVC
Sbjct: 485  LSLFGSAPNSADSSQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVC 544

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+L VL+Q++ PE+ITEVELPGCKGIWTVYHK+ RGH            EYHA
Sbjct: 545  CSGHGKNGALSVLRQSINPEMITEVELPGCKGIWTVYHKNARGHNADSKITASDD-EYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV Y+++G TIAAGNLFGRRRV+QVY RGARILDGS
Sbjct: 604  YLIISLEARTMVLETADLLSEVTESVDYFVQGRTIAAGNLFGRRRVVQVYERGARILDGS 663

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            +MT+++S G              VLSV+I DPYVLLRM+DG I+LL+GDPSS        
Sbjct: 664  FMTKDISFGTLNAESATGSEST-VLSVSIVDPYVLLRMSDGGIRLLIGDPSSCTVSVSIP 722

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                        STDAWLSTGV EAIDG+DG +HDQGDIYCVVC
Sbjct: 723  AAFENSKKQISACTLYHDKGPEPWLRKASTDAWLSTGVDEAIDGSDGLLHDQGDIYCVVC 782

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVM--KE 1698
            YESG+LEIFDVP FNCVFSVDKF+SGK+HLVDT     S D QK  NK+SE++     KE
Sbjct: 783  YESGSLEIFDVPNFNCVFSVDKFVSGKTHLVDTLMQDSSKDSQKLINKSSEEVSAQGRKE 842

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            + ++MKVVELAMQ+WSGQH+RPFLFG+L DG +LCYHAYL+EG + T K E++       
Sbjct: 843  NIEDMKVVELAMQRWSGQHSRPFLFGILNDGMILCYHAYLFEGPEITSKTEDSASAQGTS 902

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RFARVPL+TY R++ S+    QRMT+FKN+ GYQGLFLSGSRPAW M
Sbjct: 903  GLTNVSASRLRNLRFARVPLDTYARKDMSTETSCQRMTIFKNIAGYQGLFLSGSRPAWLM 962

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RERLR+HPQLCDGSVVAFTVLHNVNCNHGLIYVTSQG LKICQLP + SYDNYWPVQK
Sbjct: 963  VFRERLRVHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGILKICQLPPISSYDNYWPVQK 1022

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPL+GTPHQVTYF+EKNLYPLIVS+PV KPLNQ+LSSLVD +A +Q E+ N+  DEL ++
Sbjct: 1023 IPLKGTPHQVTYFAEKNLYPLIVSVPVHKPLNQILSSLVDQEAGHQVENHNLSSDELHRT 1082

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            YT++EFEVRI+EP  SGGPWQT+ATIPMQ +ENALTVR+VTLFNTTT ENETL+A+GTAY
Sbjct: 1083 YTVDEFEVRIMEP--SGGPWQTKATIPMQTSENALTVRVVTLFNTTTNENETLIAIGTAY 1140

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVAARGR+LL+S G+N +N   LV+EVY+KE KGAISALASLQGHLL+A GPK+ L
Sbjct: 1141 VQGEDVAARGRVLLFSAGNNTQN---LVSEVYAKEFKGAISALASLQGHLLIAQGPKITL 1197

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            +KW GTELNGVAF D PPL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQG+QLNLLAKDFG
Sbjct: 1198 NKWNGTELNGVAFFDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGSQLNLLAKDFG 1257

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
             LDCF+TEFLIDGSTLSLVV DEQKN+QIF+YAPKMSESWKGQKLLSRAEFH+G HVTKF
Sbjct: 1258 NLDCFATEFLIDGSTLSLVVADEQKNVQIFFYAPKMSESWKGQKLLSRAEFHVGTHVTKF 1317

Query: 257  LRLQMLPASDRTGATTGSGRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDAVPHM 78
            LRLQML  S     +  + R+ALLFGTLDGSIGCVAPLDEL FRRLQ+LQ++LVDAV H+
Sbjct: 1318 LRLQMLSTSGTNPGSDKTNRYALLFGTLDGSIGCVAPLDELTFRRLQSLQKKLVDAVAHV 1377

Query: 77   GGLNPKAFRQFHSKGRAHKPGPDNM 3
             GLNP+AFRQF S G+AH+PGPD +
Sbjct: 1378 AGLNPRAFRQFRSNGKAHRPGPDTI 1402


>ref|XP_012484368.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Gossypium raimondii]
            gi|763767219|gb|KJB34434.1| hypothetical protein
            B456_006G065300 [Gossypium raimondii]
          Length = 1456

 Score = 1902 bits (4928), Expect = 0.0
 Identities = 953/1348 (70%), Positives = 1103/1348 (81%), Gaps = 27/1348 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLS-RGG 3789
            +Y+VRV EE   +   S+   E KRGG M G+S  SLELVC Y+L GNVE+MAVLS  GG
Sbjct: 68   LYVVRVQEEGTREARNST---EVKRGGIMDGVSAVSLELVCSYRLHGNVESMAVLSIGGG 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIIL F DAKI+VLEFDDS   L+TSSMHCFEGPEW +L+RGRESFARGPLVK
Sbjct: 125  DVSRRRDSIILTFQDAKIAVLEFDDSTHSLQTSSMHCFEGPEWLHLKRGRESFARGPLVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
             DPQGRCSGVL +GL+MIILKAAQA               T  AR+ESSY+I+LR+LDMK
Sbjct: 185  ADPQGRCSGVLVYGLQMIILKAAQAGSGFVGEDDAFGSGATVSARVESSYIINLRDLDMK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            H+KDF+F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA NL
Sbjct: 245  HIKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAANL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLVISAN IHYHSQ  +CALALN++A   D SQELPRSSF+VEL
Sbjct: 305  PHDAYKLLAVPSPIGGVLVISANMIHYHSQSATCALALNNYAASVDNSQELPRSSFNVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWLL DVA+LS KTGELLLLTLV DGRVVQRL+LSK +ASVLTS I TIG+S  F
Sbjct: 365  DAANATWLLNDVALLSAKTGELLLLTLVYDGRVVQRLDLSKSKASVLTSDITTIGNSLVF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ++SG G +   SG +KEEVGDIEGD P AKRLR +SS+ LQD    EE
Sbjct: 425  LGSRLGDSLLVQFSSGSGASTLPSG-LKEEVGDIEGDVPLAKRLRRSSSDALQDAVGSEE 483

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ S PN SE  QK+F FAVRDSLINVGPLKDF+YGLRINAD NA GI+KQSNYELVC
Sbjct: 484  LSLYGSTPNNSESAQKAFLFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVC 543

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LCVL+Q++RPE+ITEVEL GCKGIWTVYHKSTRGH           DEYHA
Sbjct: 544  CSGHGKNGALCVLRQSIRPEMITEVELTGCKGIWTVYHKSTRGHNADSSKLADDDDEYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV YY++G TIAAGNLFGRRRVIQV+ RGARILDGS
Sbjct: 604  YLIISLEARTMVLETADLLTEVTESVDYYVQGRTIAAGNLFGRRRVIQVFERGARILDGS 663

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            +MTQELS+               V+SV+IADPYVLLRMTDGSI LLVGDP++        
Sbjct: 664  FMTQELSIPLPNSETSSGSDNSTVMSVSIADPYVLLRMTDGSILLLVGDPATCTVSINSP 723

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                        S+DAWLSTG+GE+ID  DG  HDQGDIYCV+C
Sbjct: 724  AAFEGSKKRVSACSLYHDKGPEPWLRKASSDAWLSTGIGESIDSADGGPHDQGDIYCVIC 783

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI--KVMKE 1698
            YE+G LEIFDVP FNCVFSV+KF SG++HLVD ++   S   +K  NK+SE++  +  KE
Sbjct: 784  YENGALEIFDVPNFNCVFSVEKFASGRAHLVDAYSQESSEGSEKPINKSSEELAGQSRKE 843

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            +  N+KVVELAMQ+WSG H+RPF+FG+LTDGT+LCYHAYL+EG DN  K+E +       
Sbjct: 844  NVHNLKVVELAMQRWSGNHSRPFIFGILTDGTILCYHAYLFEGPDNASKVEGSASAQNSV 903

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF RV L+ YTR+E+S+   SQR+T+FKN+ GYQG FLSG RPAWFM
Sbjct: 904  GLSNVNASRLRNLRFIRVSLDAYTREETSNGTLSQRITIFKNISGYQGFFLSGLRPAWFM 963

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V R+RLRIHPQ+CDGS+VAFTVLHNVNCNHG IYVTSQG LKICQ+PS  +YDNYWPVQK
Sbjct: 964  VFRQRLRIHPQICDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQMPSTSNYDNYWPVQK 1023

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPLRGTPHQVTYF+E+NLYPLIVS+PV KP+NQVLSSLVD +A +Q ++ N+  DEL ++
Sbjct: 1024 IPLRGTPHQVTYFAERNLYPLIVSVPVHKPVNQVLSSLVDQEAGHQMDNLNLSSDELHRT 1083

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            YT+EEFEVRILEPEKSGGPW+T+ATIPMQ++ENALTVR+VTLFNTTTKENETL+A+GTAY
Sbjct: 1084 YTVEEFEVRILEPEKSGGPWETKATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAY 1143

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVAARGR+LL+SIG + +N+Q LV+EVYSKELKGAISALASLQGHLL+ASGPK+IL
Sbjct: 1144 VQGEDVAARGRVLLFSIGRSTDNNQNLVSEVYSKELKGAISALASLQGHLLIASGPKIIL 1203

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            H WTG+ELNG+AF+D PPL+VVSLNIVKNFIL+GD+HKSIYFLSWKEQGAQL+LLAKDFG
Sbjct: 1204 HIWTGSELNGIAFYDAPPLYVVSLNIVKNFILLGDVHKSIYFLSWKEQGAQLSLLAKDFG 1263

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
            +LDCF+TEFLIDGSTLSL+V+D+QKNIQ+FYYAPKMSESW+GQKLLSRAEFH+GA VTKF
Sbjct: 1264 SLDCFATEFLIDGSTLSLMVSDDQKNIQVFYYAPKMSESWRGQKLLSRAEFHVGARVTKF 1323

Query: 257  LRLQMLPASDRTGATTG---SGRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDAV 87
            LRLQML  S RT AT G   + RFALLFGTLDGSIGC+APLDEL FRRLQ+LQ++LVDAV
Sbjct: 1324 LRLQMLSTSGRTSATAGPDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAV 1383

Query: 86   PHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            PH+ GLNP++FR F S G+AH+PGPD++
Sbjct: 1384 PHVAGLNPRSFRHFRSNGKAHRPGPDSI 1411


>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like isoform X2 [Citrus sinensis]
          Length = 1457

 Score = 1902 bits (4927), Expect = 0.0
 Identities = 960/1349 (71%), Positives = 1109/1349 (82%), Gaps = 28/1349 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRGG- 3789
            +Y+VRV EE  SK +K+S   E KR   M G+S ASLELVCHY+L GNVE++A+LS+GG 
Sbjct: 68   IYVVRVQEEG-SKESKNSG--ETKRRVLMDGISAASLELVCHYRLHGNVESLAILSQGGA 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIILAF DAKISVLEFDDSI GLR +SMHCFE PEW +L+RGRESFARGPLVK
Sbjct: 125  DNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL +GL+MIILKA+Q               G   ARIESS+VI+LR+LDMK
Sbjct: 185  VDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF+F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 245  HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLV+ AN IHYHSQ  SCALALN++AV  D SQELPRSSFSVEL
Sbjct: 305  PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAA+ATWL  DVA+LSTKTG+L+LLT+V DGRVVQRL+LSK   SVLTS I TIG+S FF
Sbjct: 365  DAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+T G GT+  +SG +KEE GDIE DAPS KRLR +SS+ LQD+ +GEE
Sbjct: 425  LGSRLGDSLLVQFTCGSGTSMLSSG-LKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEE 483

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SA N +E  QK+FSFAVRDSL+N+GPLKDF+YGLRINAD +A GISKQSNYELVC
Sbjct: 484  LSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVC 543

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LCVL+Q++RPE+ITEVELPGCKGIWTVYHKS+RGH           DEYHA
Sbjct: 544  CSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV Y+++G TIAAGNLFGRRRVIQV+ RGARILDGS
Sbjct: 604  YLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGS 663

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            YMTQ+LS G              VLSV+IADPYVLL M+DGSI+LLVGDPS+        
Sbjct: 664  YMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTP 723

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTGVGEAIDG DG   DQGDIY VVC
Sbjct: 724  AAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPLDQGDIYSVVC 783

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI--KVMKE 1698
            YESG LEIFDVP FNCVF+VDKF+SG++H+VDT+      D +   N +SE+   +  KE
Sbjct: 784  YESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTGQGRKE 843

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            +  +MKVVELAMQ+WSG H+RPFLF +LTDGT+LCY AYL+EG +NT K ++ V      
Sbjct: 844  NIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVSTSRSL 903

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RFAR+PL+ YTR+E+    P QR+T+FKN+ G+QG FLSGSRP W M
Sbjct: 904  SVSNVSASRLRNLRFARIPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCM 963

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RERLR+HPQLCDGS+VAFTVLHNVNCNHG IYVTSQG LKICQLPS  +YDNYWPVQK
Sbjct: 964  VFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQK 1023

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPL+ TPHQ+TYF+EKNLYPLIVS+PV KPLNQVLS L+D +  +Q ++ N+   +L ++
Sbjct: 1024 IPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHRT 1083

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            YT+EE+EVRILEP+++GGPWQTRATIPMQ++ENALTVR+VTLFNTTTKENETL+A+GTAY
Sbjct: 1084 YTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAY 1143

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVAARGR+LL+S G NA+N Q LVTEVYSKELKGAISALASLQGHLL+ASGPK+IL
Sbjct: 1144 VQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGHLLIASGPKIIL 1203

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            HKWTGTELNG+AF+D PPL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQLNLLAKDFG
Sbjct: 1204 HKWTGTELNGIAFYDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLNLLAKDFG 1263

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
            +LDCF+TEFLIDGSTLSLVV+DEQKNIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTKF
Sbjct: 1264 SLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKF 1323

Query: 257  LRLQML-PASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDA 90
            LRLQML  +SDRTGA  GS    RFALLFGTLDGSIGC+APLDEL FRRLQ+LQ++LVD+
Sbjct: 1324 LRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDS 1383

Query: 89   VPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            VPH+ GLNP++FRQFHS G+AH+PGPD++
Sbjct: 1384 VPHVAGLNPRSFRQFHSNGKAHRPGPDSI 1412


>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
            gi|557523633|gb|ESR35000.1| hypothetical protein
            CICLE_v10004147mg [Citrus clementina]
          Length = 1457

 Score = 1898 bits (4916), Expect = 0.0
 Identities = 958/1349 (71%), Positives = 1107/1349 (82%), Gaps = 28/1349 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRGG- 3789
            +Y+VRV EE  SK +K+S   E KR   M G+S ASLELVCHY+L GNVE++A+LS+GG 
Sbjct: 68   IYVVRVQEEG-SKESKNSG--ETKRRVLMDGISAASLELVCHYRLHGNVESLAILSQGGA 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIILAF DAKISVLEFDDSI GLR +SMHCFE PEW +L+RGRESFARGPLVK
Sbjct: 125  DNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL +GL+MIILKA+Q               G   ARIESS+VI+LR+LDMK
Sbjct: 185  VDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF+F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 245  HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLV+ AN IHYHSQ  SCALALN++AV  D SQELPRSSFSVEL
Sbjct: 305  PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAA+ATWL  DVA+LSTKTG+L+LLT+V DGRVVQRL+LSK   SVLTS I TIG+S FF
Sbjct: 365  DAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+T G GT+  +SG  KEE GDIE DAPS KRLR +SS+ LQD+ +GEE
Sbjct: 425  LGSRLGDSLLVQFTCGSGTSMLSSGP-KEEFGDIEADAPSTKRLRRSSSDALQDMVNGEE 483

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SA N +E  QK+FSFAVRDSL+N+GPLKDF+YGLRINAD +A GISKQSNYELVC
Sbjct: 484  LSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVC 543

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LCVL+Q++RPE+ITEVELPGCKGIWTVYHKS+RGH           DEYHA
Sbjct: 544  CSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNTDSSRMAAYDDEYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV Y+++G TIAAGNLFGRRRVIQV+ RGARILDGS
Sbjct: 604  YLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGS 663

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            YMTQ+LS G              VLSV+IADPYVLL M+DGSI+LLVGDPS+        
Sbjct: 664  YMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTP 723

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTGVGEAIDG DG   DQGDIY VVC
Sbjct: 724  AAIESSKKPVSACTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPLDQGDIYSVVC 783

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI--KVMKE 1698
            YESG LEIFDVP FNCVF+VDKF+SG++H+VDT+      D +   N +SE+   +  KE
Sbjct: 784  YESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTGQGRKE 843

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            +  +MKVVELAMQ+WSG H+RPFLF +LTDGT+LCY AYL+EG +NT K ++ V      
Sbjct: 844  NIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQAYLFEGSENTSKSDDPVSTSRSL 903

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF+R PL+ YTR+E+    P QR+T+FKN+ G+QG FLSGSRP W M
Sbjct: 904  SVSNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCM 963

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RERLR+HPQLCDGS+VAFTVLHNVNCNHG IYVTSQG LKICQLPS  +YDNYWPVQK
Sbjct: 964  VFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQK 1023

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            IPL+ TPHQ+TYF+EKNLYPLIVS+PV KPLNQVLS L+D +  +Q ++ N+   +L ++
Sbjct: 1024 IPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHRT 1083

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            YT+EE+EVRILEP+++GGPWQTRATIPMQ++ENALTVR+VTLFNTTTKEN+TL+A+GTAY
Sbjct: 1084 YTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENDTLLAIGTAY 1143

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVAARGR+LL+S G NA+N Q LVTEVYSKELKGAISALASLQGHLL+ASGPK+IL
Sbjct: 1144 VQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGHLLIASGPKIIL 1203

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            HKWTGTELNG+AF+D PPL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQLNLLAKDFG
Sbjct: 1204 HKWTGTELNGIAFYDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLNLLAKDFG 1263

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
            +LDCF+TEFLIDGSTLSLVV+DEQKNIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTKF
Sbjct: 1264 SLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKF 1323

Query: 257  LRLQML-PASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDA 90
            LRLQML  +SDRTGA  GS    RFALLFGTLDGSIGC+APLDEL FRRLQ+LQ++LVD+
Sbjct: 1324 LRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDS 1383

Query: 89   VPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            VPH+ GLNP++FRQFHS G+AH+PGPD++
Sbjct: 1384 VPHVAGLNPRSFRQFHSNGKAHRPGPDSI 1412


>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like isoform X1 [Citrus sinensis]
          Length = 1458

 Score = 1897 bits (4915), Expect = 0.0
 Identities = 960/1350 (71%), Positives = 1109/1350 (82%), Gaps = 29/1350 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRGG- 3789
            +Y+VRV EE  SK +K+S   E KR   M G+S ASLELVCHY+L GNVE++A+LS+GG 
Sbjct: 68   IYVVRVQEEG-SKESKNSG--ETKRRVLMDGISAASLELVCHYRLHGNVESLAILSQGGA 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIILAF DAKISVLEFDDSI GLR +SMHCFE PEW +L+RGRESFARGPLVK
Sbjct: 125  DNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL +GL+MIILKA+Q               G   ARIESS+VI+LR+LDMK
Sbjct: 185  VDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF+F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 245  HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLV+ AN IHYHSQ  SCALALN++AV  D SQELPRSSFSVEL
Sbjct: 305  PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAA+ATWL  DVA+LSTKTG+L+LLT+V DGRVVQRL+LSK   SVLTS I TIG+S FF
Sbjct: 365  DAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+T G GT+  +SG +KEE GDIE DAPS KRLR +SS+ LQD+ +GEE
Sbjct: 425  LGSRLGDSLLVQFTCGSGTSMLSSG-LKEEFGDIEADAPSTKRLRRSSSDALQDMVNGEE 483

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SA N +E  QK+FSFAVRDSL+N+GPLKDF+YGLRINAD +A GISKQSNYELVC
Sbjct: 484  LSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVC 543

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LCVL+Q++RPE+ITEVELPGCKGIWTVYHKS+RGH           DEYHA
Sbjct: 544  CSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNADSSRMAAYDDEYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV Y+++G TIAAGNLFGRRRVIQV+ RGARILDGS
Sbjct: 604  YLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGS 663

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            YMTQ+LS G              VLSV+IADPYVLL M+DGSI+LLVGDPS+        
Sbjct: 664  YMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTP 723

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTGVGEAIDG DG   DQGDIY VVC
Sbjct: 724  AAIESSKKPVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPLDQGDIYSVVC 783

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI--KVMKE 1698
            YESG LEIFDVP FNCVF+VDKF+SG++H+VDT+      D +   N +SE+   +  KE
Sbjct: 784  YESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTGQGRKE 843

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            +  +MKVVELAMQ+WSG H+RPFLF +LTDGT+LCY AYL+EG +NT K ++ V      
Sbjct: 844  NIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQAYLFEGPENTSKSDDPVSTSRSL 903

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RFAR+PL+ YTR+E+    P QR+T+FKN+ G+QG FLSGSRP W M
Sbjct: 904  SVSNVSASRLRNLRFARIPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCM 963

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RERLR+HPQLCDGS+VAFTVLHNVNCNHG IYVTSQG LKICQLPS  +YDNYWPVQK
Sbjct: 964  VFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQK 1023

Query: 1157 -IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQK 981
             IPL+ TPHQ+TYF+EKNLYPLIVS+PV KPLNQVLS L+D +  +Q ++ N+   +L +
Sbjct: 1024 VIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHR 1083

Query: 980  SYTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTA 801
            +YT+EE+EVRILEP+++GGPWQTRATIPMQ++ENALTVR+VTLFNTTTKENETL+A+GTA
Sbjct: 1084 TYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTA 1143

Query: 800  YVQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVI 621
            YVQGEDVAARGR+LL+S G NA+N Q LVTEVYSKELKGAISALASLQGHLL+ASGPK+I
Sbjct: 1144 YVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGHLLIASGPKII 1203

Query: 620  LHKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDF 441
            LHKWTGTELNG+AF+D PPL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQLNLLAKDF
Sbjct: 1204 LHKWTGTELNGIAFYDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLNLLAKDF 1263

Query: 440  GTLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTK 261
            G+LDCF+TEFLIDGSTLSLVV+DEQKNIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTK
Sbjct: 1264 GSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTK 1323

Query: 260  FLRLQML-PASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVD 93
            FLRLQML  +SDRTGA  GS    RFALLFGTLDGSIGC+APLDEL FRRLQ+LQ++LVD
Sbjct: 1324 FLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVD 1383

Query: 92   AVPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            +VPH+ GLNP++FRQFHS G+AH+PGPD++
Sbjct: 1384 SVPHVAGLNPRSFRQFHSNGKAHRPGPDSI 1413


>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
            gi|557523632|gb|ESR34999.1| hypothetical protein
            CICLE_v10004147mg [Citrus clementina]
          Length = 1458

 Score = 1893 bits (4904), Expect = 0.0
 Identities = 958/1350 (70%), Positives = 1107/1350 (82%), Gaps = 29/1350 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRGG- 3789
            +Y+VRV EE  SK +K+S   E KR   M G+S ASLELVCHY+L GNVE++A+LS+GG 
Sbjct: 68   IYVVRVQEEG-SKESKNSG--ETKRRVLMDGISAASLELVCHYRLHGNVESLAILSQGGA 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIILAF DAKISVLEFDDSI GLR +SMHCFE PEW +L+RGRESFARGPLVK
Sbjct: 125  DNSRRRDSIILAFEDAKISVLEFDDSIHGLRITSMHCFESPEWLHLKRGRESFARGPLVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL +GL+MIILKA+Q               G   ARIESS+VI+LR+LDMK
Sbjct: 185  VDPQGRCGGVLVYGLQMIILKASQGGSGLVGDEDTFGSGGGFSARIESSHVINLRDLDMK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF+F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 245  HVKDFIFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAMNL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLV+ AN IHYHSQ  SCALALN++AV  D SQELPRSSFSVEL
Sbjct: 305  PHDAYKLLAVPSPIGGVLVVGANTIHYHSQSASCALALNNYAVSLDSSQELPRSSFSVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAA+ATWL  DVA+LSTKTG+L+LLT+V DGRVVQRL+LSK   SVLTS I TIG+S FF
Sbjct: 365  DAAHATWLQNDVALLSTKTGDLVLLTVVYDGRVVQRLDLSKTNPSVLTSDITTIGNSLFF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+T G GT+  +SG  KEE GDIE DAPS KRLR +SS+ LQD+ +GEE
Sbjct: 425  LGSRLGDSLLVQFTCGSGTSMLSSGP-KEEFGDIEADAPSTKRLRRSSSDALQDMVNGEE 483

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SA N +E  QK+FSFAVRDSL+N+GPLKDF+YGLRINAD +A GISKQSNYELVC
Sbjct: 484  LSLYGSASNNTESAQKTFSFAVRDSLVNIGPLKDFSYGLRINADASATGISKQSNYELVC 543

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LCVL+Q++RPE+ITEVELPGCKGIWTVYHKS+RGH           DEYHA
Sbjct: 544  CSGHGKNGALCVLRQSIRPEMITEVELPGCKGIWTVYHKSSRGHNTDSSRMAAYDDEYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV Y+++G TIAAGNLFGRRRVIQV+ RGARILDGS
Sbjct: 604  YLIISLEARTMVLETADLLTEVTESVDYFVQGRTIAAGNLFGRRRVIQVFERGARILDGS 663

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            YMTQ+LS G              VLSV+IADPYVLL M+DGSI+LLVGDPS+        
Sbjct: 664  YMTQDLSFGPSNSESGSGSENSTVLSVSIADPYVLLGMSDGSIRLLVGDPSTCTVSVQTP 723

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTGVGEAIDG DG   DQGDIY VVC
Sbjct: 724  AAIESSKKPVSACTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGADGGPLDQGDIYSVVC 783

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDI--KVMKE 1698
            YESG LEIFDVP FNCVF+VDKF+SG++H+VDT+      D +   N +SE+   +  KE
Sbjct: 784  YESGALEIFDVPNFNCVFTVDKFVSGRTHIVDTYMREALKDSETEINSSSEEGTGQGRKE 843

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
            +  +MKVVELAMQ+WSG H+RPFLF +LTDGT+LCY AYL+EG +NT K ++ V      
Sbjct: 844  NIHSMKVVELAMQRWSGHHSRPFLFAILTDGTILCYQAYLFEGSENTSKSDDPVSTSRSL 903

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF+R PL+ YTR+E+    P QR+T+FKN+ G+QG FLSGSRP W M
Sbjct: 904  SVSNVSASRLRNLRFSRTPLDAYTREETPHGAPCQRITIFKNISGHQGFFLSGSRPCWCM 963

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RERLR+HPQLCDGS+VAFTVLHNVNCNHG IYVTSQG LKICQLPS  +YDNYWPVQK
Sbjct: 964  VFRERLRVHPQLCDGSIVAFTVLHNVNCNHGFIYVTSQGILKICQLPSGSTYDNYWPVQK 1023

Query: 1157 -IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQK 981
             IPL+ TPHQ+TYF+EKNLYPLIVS+PV KPLNQVLS L+D +  +Q ++ N+   +L +
Sbjct: 1024 VIPLKATPHQITYFAEKNLYPLIVSVPVLKPLNQVLSLLIDQEVGHQIDNHNLSSVDLHR 1083

Query: 980  SYTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTA 801
            +YT+EE+EVRILEP+++GGPWQTRATIPMQ++ENALTVR+VTLFNTTTKEN+TL+A+GTA
Sbjct: 1084 TYTVEEYEVRILEPDRAGGPWQTRATIPMQSSENALTVRVVTLFNTTTKENDTLLAIGTA 1143

Query: 800  YVQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVI 621
            YVQGEDVAARGR+LL+S G NA+N Q LVTEVYSKELKGAISALASLQGHLL+ASGPK+I
Sbjct: 1144 YVQGEDVAARGRVLLFSTGRNADNPQNLVTEVYSKELKGAISALASLQGHLLIASGPKII 1203

Query: 620  LHKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDF 441
            LHKWTGTELNG+AF+D PPL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQLNLLAKDF
Sbjct: 1204 LHKWTGTELNGIAFYDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLNLLAKDF 1263

Query: 440  GTLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTK 261
            G+LDCF+TEFLIDGSTLSLVV+DEQKNIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTK
Sbjct: 1264 GSLDCFATEFLIDGSTLSLVVSDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTK 1323

Query: 260  FLRLQML-PASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVD 93
            FLRLQML  +SDRTGA  GS    RFALLFGTLDGSIGC+APLDEL FRRLQ+LQ++LVD
Sbjct: 1324 FLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVD 1383

Query: 92   AVPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            +VPH+ GLNP++FRQFHS G+AH+PGPD++
Sbjct: 1384 SVPHVAGLNPRSFRQFHSNGKAHRPGPDSI 1413


>ref|XP_014512842.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Vigna radiata var. radiata]
          Length = 1445

 Score = 1892 bits (4901), Expect = 0.0
 Identities = 955/1346 (70%), Positives = 1096/1346 (81%), Gaps = 25/1346 (1%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLS-RGG 3789
            VY VR+ E+  +K T      +P+RG  + G+ GASLELVCHY+L GNVETMAVLS  GG
Sbjct: 65   VYAVRIQEDQPTKAT------DPRRGTLLDGIEGASLELVCHYRLHGNVETMAVLSIGGG 118

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S++RDSIIL FADAKISVLE+DDSI GLRTSS+HCFEGPEW +L+RGRE FARGP+VK
Sbjct: 119  DASRKRDSIILTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVVK 178

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC G L + L+MIILKA QA              G   ARIESSY+I+LR+LDM+
Sbjct: 179  VDPQGRCGGALVYDLQMIILKATQAGSGLVGDDDALGFSGAVAARIESSYMINLRDLDMR 238

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 239  HVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNL 298

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLVI AN +HYHSQ  SC+LALN +AV  D SQE+PRSSF+VEL
Sbjct: 299  PHDAYKLLAVPSPIGGVLVIGANTVHYHSQSASCSLALNSYAVSPDNSQEIPRSSFNVEL 358

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            D+ANATWLL DVA+LSTKTGELLLLTLV DGRVVQRL+LSK +ASVL+SGI TIG+  FF
Sbjct: 359  DSANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNCLFF 418

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            L SRLGDSMLVQ++ G G  +  S ++KEEVGDIE DAPS KRLR + S+TLQD+ SGEE
Sbjct: 419  LASRLGDSMLVQFSCGSG-GSLLSSNLKEEVGDIEVDAPS-KRLRRSPSDTLQDMVSGEE 476

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSLF SAPN +E  QKSFSFAVRDSLINVGPLKDF+YGLRINAD NA GI+KQSNYELVC
Sbjct: 477  LSLFGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVC 536

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNGSLCVL+Q++RPE+ITEVELPGCKGIWTVYHKSTR H           DEYHA
Sbjct: 537  CSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNTDSSKLADDDDEYHA 596

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV YY++G T+AAGNLFGRRRVIQVY RGARILDGS
Sbjct: 597  YLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGS 656

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDP---------- 2019
            +MTQ+++ G               LSV+IADP+VLLRM+DGS++LL+GDP          
Sbjct: 657  FMTQDVTFGASNSESGSASESAIALSVSIADPFVLLRMSDGSVRLLIGDPITCTISVTSP 716

Query: 2018 -----------SSXXXXXXXXXXXXXXTSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                       S               TSTDAWLSTGVGEAIDGTDGA  D GDIYCVVC
Sbjct: 717  ASFESTKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAAQDHGDIYCVVC 776

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVMKEDA 1692
            +++G LEIFDVP FNCVFSV+ F+SGKSHLVD     +  D  K  +++    +  KE+ 
Sbjct: 777  FDNGNLEIFDVPNFNCVFSVETFMSGKSHLVDALMKEVLKD-SKMGDRDGVVSQGRKENV 835

Query: 1691 QNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXXXX 1512
             +MKVVELAMQ+WSGQH+RPFLFG+L+DGT+LCYHAYLYE  D T K+E++         
Sbjct: 836  PDMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLYESPDGTSKVEDSASAGGSVGL 895

Query: 1511 XXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFMVC 1332
                       RF RVPL+ Y+R+E+S+  P Q++T+FKN+G YQG FLSGSRPAW MV 
Sbjct: 896  GTTNVSRLRNLRFVRVPLDAYSREETSNGSPRQQITIFKNIGNYQGFFLSGSRPAWVMVL 955

Query: 1331 RERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQKIP 1152
            RERLR+HPQLCDGS+VAFTVLHNVNCNHGLIYVTSQG LKICQLPS  +YD++WPVQKIP
Sbjct: 956  RERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSNYDSHWPVQKIP 1015

Query: 1151 LRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKSYT 972
            L+ TPHQVTYF+EKNLYPLIVS PV KPLNQV+S LVD D ++Q E  N+  DE  + Y 
Sbjct: 1016 LKATPHQVTYFAEKNLYPLIVSFPVLKPLNQVIS-LVDQDVNHQNEGQNMNSDEQNRFYP 1074

Query: 971  IEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAYVQ 792
            I+EFEVRI+EPEKSGGPWQT+ATIPMQ++ENALTVRMVTL NTT+KENETL+A+GTAYVQ
Sbjct: 1075 IDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYVQ 1134

Query: 791  GEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVILHK 612
            GEDVAARGRILL+S+G N +NSQ LV+EVYSKELKGAISALASLQGHLL+ASGPK+ILHK
Sbjct: 1135 GEDVAARGRILLFSLGKNTDNSQSLVSEVYSKELKGAISALASLQGHLLIASGPKIILHK 1194

Query: 611  WTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFGTL 432
            W GTELNG+AF D PPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQL+LLAKDF +L
Sbjct: 1195 WNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFASL 1254

Query: 431  DCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKFLR 252
            DCF+TEFLIDGSTLSL+V+D++KNIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTKFLR
Sbjct: 1255 DCFATEFLIDGSTLSLMVSDDKKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLR 1314

Query: 251  LQMLPASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDAVPH 81
            LQML  SDR G+  GS    RFALLFGTLDGSIGC+APLDE+ FRRLQ+LQR+LVDAV H
Sbjct: 1315 LQMLSTSDRAGSAPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVAH 1374

Query: 80   MGGLNPKAFRQFHSKGRAHKPGPDNM 3
            + GLNP+AFRQF S G+AHKPGPD++
Sbjct: 1375 VAGLNPRAFRQFRSNGKAHKPGPDSI 1400


>ref|XP_008791964.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Phoenix dactylifera]
          Length = 1455

 Score = 1890 bits (4895), Expect = 0.0
 Identities = 944/1349 (69%), Positives = 1097/1349 (81%), Gaps = 28/1349 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRG-G 3789
            +Y+VR+ E+D     +     E + GG M GLSGA LELVCHY+L GNVE+MA+LS G  
Sbjct: 68   IYLVRIQEDDGRPDARPGG--EQRGGGMMDGLSGARLELVCHYRLHGNVESMAILSLGVD 125

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D+SKRRDSI+LAF DAK++VLE+DDS  GLRTSSMHCFEGP+W +L+RGRE FARGPL+K
Sbjct: 126  DRSKRRDSIVLAFQDAKLTVLEYDDSTHGLRTSSMHCFEGPDWHFLKRGRERFARGPLIK 185

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
             DP GRC G L +GL+MIILK+AQA              GT  ARIESSYVI+L +LDMK
Sbjct: 186  ADPLGRCGGALVYGLQMIILKSAQAGQGLVGDDEPASLGGTFPARIESSYVINLHDLDMK 245

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF F+HGYIEP MVILHERE TWAGR+SWKHHTCMICALSI+TT KQHP+IWSA+NL
Sbjct: 246  HVKDFTFVHGYIEPVMVILHEREPTWAGRISWKHHTCMICALSISTTLKQHPMIWSAVNL 305

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDA KLLAVPS +GGVLVI AN IHYHSQ  SC+L LN+FA   + S E+P+S+ +VEL
Sbjct: 306  PHDASKLLAVPSPIGGVLVICANTIHYHSQSASCSLGLNNFANQPENSSEMPKSNINVEL 365

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWL  DVAM S+KTGELLLLTLV DGRVVQRL+L K +ASVLTSGI TIGSSFFF
Sbjct: 366  DAANATWLSHDVAMFSSKTGELLLLTLVYDGRVVQRLDLMKSKASVLTSGITTIGSSFFF 425

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQY+   GT+  T+ ++K+EV DIEGD PSAKRLR  SS+ LQ++ SGEE
Sbjct: 426  LGSRLGDSLLVQYS--CGTSTPTTANMKDEVADIEGDGPSAKRLRRMSSDALQEVVSGEE 483

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+S+APN SE  QK FSFAVRDSL+N+GPLKDF+Y LRINADPNA GI+KQSNYELVC
Sbjct: 484  LSLYSTAPNSSESAQKIFSFAVRDSLVNIGPLKDFSYSLRINADPNATGIAKQSNYELVC 543

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LC+LQQ++RPELITEVELPGCKGIWTVYHKS+RGH           DEYHA
Sbjct: 544  CSGHGKNGALCMLQQSIRPELITEVELPGCKGIWTVYHKSSRGHTADPSKTMSEDDEYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD LGEVTE+V YY KGSTI+AGNLFGRRRV+Q++A GARILDGS
Sbjct: 604  YLIISLEARTMVLETADDLGEVTETVDYY-KGSTISAGNLFGRRRVVQIFAHGARILDGS 662

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSS-------- 2013
            YMTQEL+ G             AV SV+IADP++LL+MTDGSIQLLVGDPS+        
Sbjct: 663  YMTQELNFGGHNSDSTTNSELSAVASVSIADPFILLKMTDGSIQLLVGDPSACTVSVSVP 722

Query: 2012 -------------XXXXXXXXXXXXXXTSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTG+ E IDG DG+ HDQGD+YC+VC
Sbjct: 723  AIFANSTKSISTCTLYHDKGPEPWLRKTSTDAWLSTGIAETIDGNDGSYHDQGDVYCLVC 782

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVM--KE 1698
            Y++G L+IFDVPTF CVFSV+ FISGKSHLVD +    +   Q NK K SE +KV   KE
Sbjct: 783  YDNGRLDIFDVPTFKCVFSVENFISGKSHLVDAYILEPTISTQVNKEKMSEGVKVQAKKE 842

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
              +NMK+VELAM +WS Q++RPFLF +L DGTMLCYHAY+YEG ++  K+E+ V      
Sbjct: 843  TPENMKIVELAMHQWSSQYSRPFLFAILNDGTMLCYHAYIYEGPEHAAKVEDVVSPHNAI 902

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF RV L+   R+ES  +    R+TMFKNVGGYQGLFL+GSRPAWFM
Sbjct: 903  DISNISTSRLRNLRFVRVSLDITAREESPDSVMRPRITMFKNVGGYQGLFLTGSRPAWFM 962

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            VCRERLR+HPQLCDGS+VAFTVLHNVNCNHGLIYVTSQG+LKICQLPS+ +YD+YWPVQK
Sbjct: 963  VCRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGYLKICQLPSVFNYDSYWPVQK 1022

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            +PLRGTPHQVTYF+EKNLYPLI+S+PV +PLNQVLSSL D D  +QT+ +++  D+LQK 
Sbjct: 1023 VPLRGTPHQVTYFAEKNLYPLIISVPVVRPLNQVLSSLADQDIGHQTDRESVSSDDLQKF 1082

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            Y+++EFEVRILEPEKSGG W+TRA +PMQ +ENALTVR++TLFNTTT+ENE+L+A+GTAY
Sbjct: 1083 YSVDEFEVRILEPEKSGGHWETRAILPMQTSENALTVRVITLFNTTTRENESLLAIGTAY 1142

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVAARGR+LLYS   N+ENSQ LV EVYSKELKGA+SALA+LQGHLL+ASGPK+ L
Sbjct: 1143 VQGEDVAARGRVLLYSFSKNSENSQNLVLEVYSKELKGAVSALAALQGHLLIASGPKITL 1202

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            HKWTG+ELNGVAF+D  PLHVVSLNIVKNFIL+GDIHKSIYFL+WKEQGAQL+LLAKDFG
Sbjct: 1203 HKWTGSELNGVAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQLSLLAKDFG 1261

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
            TLDC++TEFLIDGSTLSLVV+D+QKNIQIFYYAPKM ESWKGQKLL RAEFH GAHVTKF
Sbjct: 1262 TLDCYATEFLIDGSTLSLVVSDDQKNIQIFYYAPKMLESWKGQKLLCRAEFHAGAHVTKF 1321

Query: 257  LRLQMLPAS-DRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDA 90
            LRLQMLP S DRT A TGS    RFALLFGTLDGSIGC+APLDEL FRRLQTLQR+LVDA
Sbjct: 1322 LRLQMLPTSADRTTAATGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQTLQRKLVDA 1381

Query: 89   VPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            VPH+ GLNP++FRQF + G+AH+PGPDNM
Sbjct: 1382 VPHVCGLNPRSFRQFRANGKAHRPGPDNM 1410


>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Glycine max] gi|947059814|gb|KRH09220.1|
            hypothetical protein GLYMA_16G203900 [Glycine max]
          Length = 1447

 Score = 1890 bits (4895), Expect = 0.0
 Identities = 956/1346 (71%), Positives = 1095/1346 (81%), Gaps = 25/1346 (1%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLS-RGG 3789
            VY VR+ E+   K    S     +RG  + G++GASLELVCHY+L GNVETMAVLS  GG
Sbjct: 66   VYAVRLQEDQPPKAAADS-----RRGALLDGIAGASLELVCHYRLHGNVETMAVLSIGGG 120

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSI+L FADAKISVLE+DDSI GLRTSS+HCFEGPEW +L+RGRE FARGP+VK
Sbjct: 121  DVSRRRDSIMLTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVVK 180

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL + L+MIILKA QA              G   ARIESSY+I+LR+LDM+
Sbjct: 181  VDPQGRCGGVLIYDLQMIILKATQAGSGLVGEDDALGSSGAVAARIESSYMINLRDLDMR 240

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 241  HVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNL 300

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLVISAN IHYHSQ  SCALALN +AV  D SQE+PRSSF+VEL
Sbjct: 301  PHDAYKLLAVPSPIGGVLVISANTIHYHSQSASCALALNSYAVTLDSSQEIPRSSFNVEL 360

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWLL DVA+LSTKTGELLLLTLV DGRVVQRL+LSK +ASVL+SGI TIG+S FF
Sbjct: 361  DAANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFF 420

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            L SRLGDSMLVQ++ G G +  +S ++KEEVGDIE DAPS KRLR + S+ LQD+ SGEE
Sbjct: 421  LASRLGDSMLVQFSCGSGVSMLSS-NLKEEVGDIEADAPS-KRLRRSPSDALQDMVSGEE 478

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ SAPN +E  QKSFSFAVRDSLINVGPLKDF+YGLRINAD NA GI+KQSNYELVC
Sbjct: 479  LSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVC 538

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNGSLCVL+Q++RPE+ITEVELPGCKGIWTVYHKSTR H           DEYHA
Sbjct: 539  CSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNADSSKMADDDDEYHA 598

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV YY++G T+AAGNLFGR RVIQVY RGARILDGS
Sbjct: 599  YLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRCRVIQVYERGARILDGS 658

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            +MTQ++S G               LSV+IADP+VLLRM+DGSI+LL+GDPS+        
Sbjct: 659  FMTQDVSFGASNLESGSASDSAIALSVSIADPFVLLRMSDGSIRLLIGDPSTCTISVTSP 718

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTGVGE IDGTDGA  D GDIYCVVC
Sbjct: 719  ASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGETIDGTDGAAQDHGDIYCVVC 778

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVMKEDA 1692
            +++G LEIFDVP FNCVFSV+ F+SGKSHLVD     +  D  K  +++    +  KE+ 
Sbjct: 779  FDNGNLEIFDVPNFNCVFSVENFMSGKSHLVDALMKEVLKD-SKQGDRDGVINQGRKENI 837

Query: 1691 QNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXXXX 1512
             +MKVVELAMQ+WSGQH+RPFLFG+L+DGT+LCYHAYLYE  D+T K+E++         
Sbjct: 838  PDMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLYESPDSTSKVEDSASAGGSIGL 897

Query: 1511 XXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFMVC 1332
                       RF RVPL+ Y R+++S+  P Q++T+FKN+G Y+G FLSGSRPAW MV 
Sbjct: 898  SSTNVSRLRNLRFVRVPLDAYAREDTSNGPPCQQITIFKNIGSYEGFFLSGSRPAWVMVL 957

Query: 1331 RERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQKIP 1152
            RERLR+HPQLCDGS+VAFTVLHNVNCN GLIYVTSQG LKICQLPS  +YD+YWPVQKIP
Sbjct: 958  RERLRVHPQLCDGSIVAFTVLHNVNCNQGLIYVTSQGVLKICQLPSGSNYDSYWPVQKIP 1017

Query: 1151 LRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKSYT 972
            L+ TPHQVTYF+EKNLYPLIVS PV KPLNQV+S LVD D ++Q E  N+ PDE  + Y 
Sbjct: 1018 LKATPHQVTYFAEKNLYPLIVSFPVLKPLNQVIS-LVDQDINHQNESQNMNPDEQNRFYP 1076

Query: 971  IEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAYVQ 792
            I+EFEVRI+EPEKSGGPWQT+ATIPMQ++ENALTVRMVTL NTT+KENETL+A+GTAYVQ
Sbjct: 1077 IDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLVNTTSKENETLLAIGTAYVQ 1136

Query: 791  GEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVILHK 612
            GEDVAARGRILL+S+G N +N Q LV+EVYSKELKGAISALASLQGHLL+ASGPK+ILHK
Sbjct: 1137 GEDVAARGRILLFSLGKNTDNPQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHK 1196

Query: 611  WTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFGTL 432
            W GTELNG+AF D PPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQL+LLAKDFG+L
Sbjct: 1197 WNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSL 1256

Query: 431  DCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKFLR 252
            DCF+TEFLIDGSTLSL+V+D+ +NIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTKFLR
Sbjct: 1257 DCFATEFLIDGSTLSLMVSDDNRNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLR 1316

Query: 251  LQMLPASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDAVPH 81
            LQML  SDR GA  GS    RFALLFGTLDGSIGC+APLDE+ FRRLQ+LQR+LVDAVPH
Sbjct: 1317 LQMLSTSDRAGAVPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPH 1376

Query: 80   MGGLNPKAFRQFHSKGRAHKPGPDNM 3
            + GLNP+AFR F S G+AH+PGPD++
Sbjct: 1377 VAGLNPRAFRLFRSNGKAHRPGPDSI 1402


>ref|XP_012090388.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            [Jatropha curcas] gi|643706250|gb|KDP22382.1|
            hypothetical protein JCGZ_26213 [Jatropha curcas]
          Length = 1456

 Score = 1887 bits (4887), Expect = 0.0
 Identities = 947/1349 (70%), Positives = 1104/1349 (81%), Gaps = 28/1349 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLS-RGG 3789
            VY+VRV EE   +   S    E KRGG M G+SGASLELVCHY+L GN+E+MAVL   GG
Sbjct: 68   VYVVRVQEEGSRESRNSR---ESKRGGVMDGVSGASLELVCHYRLHGNIESMAVLPIEGG 124

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S+RRDSIIL+F D+K+SVLEFDDSI GLRTSSMHCFEGPEW +L+RGRESFARGPLVK
Sbjct: 125  DGSRRRDSIILSFKDSKMSVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGRESFARGPLVK 184

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC GVL + L+MIILKAAQA              G+  +RI+SSY+I+LR+LDMK
Sbjct: 185  VDPQGRCGGVLVYDLQMIILKAAQAVSGLVGDDDTLGSGGSVSSRIQSSYIINLRDLDMK 244

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF+F H YIEP +VILHERELTWAGRVSWKHHTCMI ALSI+TT KQ  LIWS +NL
Sbjct: 245  HVKDFIFAHDYIEPVVVILHERELTWAGRVSWKHHTCMISALSISTTLKQPTLIWSVVNL 304

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHD+YKLLAVPS +GGVLVI AN IHYHS+  +CALALN +AV AD SQ+LPR+SF+VEL
Sbjct: 305  PHDSYKLLAVPSPIGGVLVIGANTIHYHSESANCALALNSYAVSADSSQDLPRASFTVEL 364

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAA ATWL  DVA+LSTK GELLLLTLV DGRVVQRL+LSK +ASVLTS I TIGSS FF
Sbjct: 365  DAAKATWLSNDVALLSTKNGELLLLTLVYDGRVVQRLDLSKSKASVLTSDITTIGSSLFF 424

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQ+T G+G++ ++SG +KEEVGDIEGDAP AKRL+ + S+ LQD+ SGEE
Sbjct: 425  LGSRLGDSLLVQFTYGLGSSMASSG-LKEEVGDIEGDAPLAKRLKRSPSDGLQDMVSGEE 483

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+ S  N +E  QK+FSFAVRDSLIN+GP+KDF+YG+RINAD NA GI+KQSNYELVC
Sbjct: 484  LSLYGSTANNTESTQKTFSFAVRDSLINIGPVKDFSYGVRINADANATGIAKQSNYELVC 543

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+L VL+Q++RPE+ITEV+LPGCKGIWTVYHK++RGH           DEYHA
Sbjct: 544  CSGHGKNGTLSVLRQSIRPEMITEVDLPGCKGIWTVYHKNSRGHNIDSSKIAEVDDEYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIIS++++TMVLETAD L EVTESV Y+++G TIAAGNLFGRRRV+QV+  GARILDG+
Sbjct: 604  YLIISMEARTMVLETADLLTEVTESVDYFVQGQTIAAGNLFGRRRVVQVFEHGARILDGT 663

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSSXXXXXXXX 1989
            + TQ+LS G              V SV+IADPYVL+RM DGSI+LLVGDPS+        
Sbjct: 664  FRTQDLSFGASNSESGPVSESSIVSSVSIADPYVLIRMNDGSIRLLVGDPSTCMVSINTP 723

Query: 1988 XXXXXX---------------------TSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                        STDAWLSTG+ EAIDG DG  HDQGDIYC+VC
Sbjct: 724  SAFENSKKSVSACTLYHDKGPEPWLRKASTDAWLSTGISEAIDGADGGAHDQGDIYCIVC 783

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVM--KE 1698
            YESG LE+ DVP FN VFSV+KFISGK++LVDT+      D Q+  NK+SE++  +  KE
Sbjct: 784  YESGALEVLDVPNFNSVFSVEKFISGKTNLVDTYVREPPKDTQQMVNKSSEEVAGLGRKE 843

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
               NMKVVELAMQ+WSG H+RPFLFG+LTDGT+LCYHAYL+EG D T K E++V      
Sbjct: 844  SMHNMKVVELAMQRWSGHHSRPFLFGILTDGTILCYHAYLFEGPDGTSKTEDSVSAQNSI 903

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF RVPL++YTR+E+S    SQR+T+FKN+ GYQG FL GSRPAWFM
Sbjct: 904  DLGINSSSRLRNLRFVRVPLDSYTREETSIES-SQRITIFKNISGYQGFFLIGSRPAWFM 962

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            V RER+R+HPQLCDGS+VAFTVLHNVNCNHGLIYVTSQG LKICQLPS+ SYDNYWPVQK
Sbjct: 963  VFRERMRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGNLKICQLPSVSSYDNYWPVQK 1022

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            +PL+ TPHQVTYF+EKNLYPLIVS+PV KP+NQVLSSLVD +A +Q E+ N+  DEL ++
Sbjct: 1023 VPLKATPHQVTYFAEKNLYPLIVSVPVQKPVNQVLSSLVDQEAGHQIENHNLSSDELHRT 1082

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            Y++EEFEVRILEPE+ GGPWQT+A IPMQ++ENALTVR+VTLFNTTTKENETL+A+GTAY
Sbjct: 1083 YSVEEFEVRILEPERPGGPWQTKAVIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAY 1142

Query: 797  VQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVIL 618
            VQGEDVAARGR+LL+S+   A+N Q+LVTEVYSKELKGAISALASLQGHLL+ASGPK+IL
Sbjct: 1143 VQGEDVAARGRVLLFSVVKTADNPQVLVTEVYSKELKGAISALASLQGHLLIASGPKIIL 1202

Query: 617  HKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFG 438
            HKWTGTELNGVAF D PPL+VVSLNIVKNFIL+GDIHKSIYFLSWKEQGAQL+LLAKDFG
Sbjct: 1203 HKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFG 1262

Query: 437  TLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKF 258
            +LDCF+TEFLIDGSTLSLVV DEQKNIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTKF
Sbjct: 1263 SLDCFATEFLIDGSTLSLVVADEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKF 1322

Query: 257  LRLQML-PASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDA 90
            +RLQML  +SDR+G   GS    RFALLFGTLDGSIGC+APLDEL FRRLQ+LQ++L+DA
Sbjct: 1323 MRLQMLSTSSDRSGVAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLIDA 1382

Query: 89   VPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            VPH+ GLNP++FRQF S GR H+PGP+++
Sbjct: 1383 VPHVAGLNPRSFRQFQSDGRVHRPGPESI 1411


>ref|XP_014512849.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Vigna radiata var. radiata]
          Length = 1444

 Score = 1885 bits (4884), Expect = 0.0
 Identities = 954/1346 (70%), Positives = 1095/1346 (81%), Gaps = 25/1346 (1%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLS-RGG 3789
            VY VR+ E+  +K T      +P+RG  + G+ GASLELVCHY+L GNVETMAVLS  GG
Sbjct: 65   VYAVRIQEDQPTKAT------DPRRGTLLDGIEGASLELVCHYRLHGNVETMAVLSIGGG 118

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D S++RDSIIL FADAKISVLE+DDSI GLRTSS+HCFEGPEW +L+RGRE FARGP+VK
Sbjct: 119  DASRKRDSIILTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVVK 178

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
            VDPQGRC G L + L+MIILKA QA              G   ARIESSY+I+LR+LDM+
Sbjct: 179  VDPQGRCGGALVYDLQMIILKATQAGSGLVGDDDALGFSGAVAARIESSYMINLRDLDMR 238

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF F+HGYIEP MVILHERELTWAGRVSWKHHTCMI ALSI+TT KQHPLIWSA+NL
Sbjct: 239  HVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNL 298

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDAYKLLAVPS +GGVLVI AN +HYHSQ  SC+LALN +AV  D SQE+PRSSF+VEL
Sbjct: 299  PHDAYKLLAVPSPIGGVLVIGANTVHYHSQSASCSLALNSYAVSPDNSQEIPRSSFNVEL 358

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            D+ANATWLL DVA+LSTKTGELLLLTLV DGRVVQRL+LSK +ASVL+SGI TIG+  FF
Sbjct: 359  DSANATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNCLFF 418

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            L SRLGDSMLVQ++ G G  +  S ++KEEVGDIE DAPS KRLR + S+TLQD+ SGEE
Sbjct: 419  LASRLGDSMLVQFSCGSG-GSLLSSNLKEEVGDIEVDAPS-KRLRRSPSDTLQDMVSGEE 476

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSLF SAPN +E  Q SFSFAVRDSLINVGPLKDF+YGLRINAD NA GI+KQSNYELVC
Sbjct: 477  LSLFGSAPNRTESAQ-SFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVC 535

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNGSLCVL+Q++RPE+ITEVELPGCKGIWTVYHKSTR H           DEYHA
Sbjct: 536  CSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNTDSSKLADDDDEYHA 595

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD L EVTESV YY++G T+AAGNLFGRRRVIQVY RGARILDGS
Sbjct: 596  YLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGS 655

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDP---------- 2019
            +MTQ+++ G               LSV+IADP+VLLRM+DGS++LL+GDP          
Sbjct: 656  FMTQDVTFGASNSESGSASESAIALSVSIADPFVLLRMSDGSVRLLIGDPITCTISVTSP 715

Query: 2018 -----------SSXXXXXXXXXXXXXXTSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                       S               TSTDAWLSTGVGEAIDGTDGA  D GDIYCVVC
Sbjct: 716  ASFESTKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGAAQDHGDIYCVVC 775

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVMKEDA 1692
            +++G LEIFDVP FNCVFSV+ F+SGKSHLVD     +  D  K  +++    +  KE+ 
Sbjct: 776  FDNGNLEIFDVPNFNCVFSVETFMSGKSHLVDALMKEVLKD-SKMGDRDGVVSQGRKENV 834

Query: 1691 QNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXXXX 1512
             +MKVVELAMQ+WSGQH+RPFLFG+L+DGT+LCYHAYLYE  D T K+E++         
Sbjct: 835  PDMKVVELAMQRWSGQHSRPFLFGILSDGTILCYHAYLYESPDGTSKVEDSASAGGSVGL 894

Query: 1511 XXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFMVC 1332
                       RF RVPL+ Y+R+E+S+  P Q++T+FKN+G YQG FLSGSRPAW MV 
Sbjct: 895  GTTNVSRLRNLRFVRVPLDAYSREETSNGSPRQQITIFKNIGNYQGFFLSGSRPAWVMVL 954

Query: 1331 RERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQKIP 1152
            RERLR+HPQLCDGS+VAFTVLHNVNCNHGLIYVTSQG LKICQLPS  +YD++WPVQKIP
Sbjct: 955  RERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSNYDSHWPVQKIP 1014

Query: 1151 LRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKSYT 972
            L+ TPHQVTYF+EKNLYPLIVS PV KPLNQV+S LVD D ++Q E  N+  DE  + Y 
Sbjct: 1015 LKATPHQVTYFAEKNLYPLIVSFPVLKPLNQVIS-LVDQDVNHQNEGQNMNSDEQNRFYP 1073

Query: 971  IEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAYVQ 792
            I+EFEVRI+EPEKSGGPWQT+ATIPMQ++ENALTVRMVTL NTT+KENETL+A+GTAYVQ
Sbjct: 1074 IDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYVQ 1133

Query: 791  GEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVILHK 612
            GEDVAARGRILL+S+G N +NSQ LV+EVYSKELKGAISALASLQGHLL+ASGPK+ILHK
Sbjct: 1134 GEDVAARGRILLFSLGKNTDNSQSLVSEVYSKELKGAISALASLQGHLLIASGPKIILHK 1193

Query: 611  WTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDFGTL 432
            W GTELNG+AF D PPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQL+LLAKDF +L
Sbjct: 1194 WNGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFASL 1253

Query: 431  DCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTKFLR 252
            DCF+TEFLIDGSTLSL+V+D++KNIQIFYYAPKMSESWKGQKLLSRAEFH+GAHVTKFLR
Sbjct: 1254 DCFATEFLIDGSTLSLMVSDDKKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLR 1313

Query: 251  LQMLPASDRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVDAVPH 81
            LQML  SDR G+  GS    RFALLFGTLDGSIGC+APLDE+ FRRLQ+LQR+LVDAV H
Sbjct: 1314 LQMLSTSDRAGSAPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVAH 1373

Query: 80   MGGLNPKAFRQFHSKGRAHKPGPDNM 3
            + GLNP+AFRQF S G+AHKPGPD++
Sbjct: 1374 VAGLNPRAFRQFRSNGKAHKPGPDSI 1399


>ref|XP_008791963.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X1 [Phoenix dactylifera]
          Length = 1456

 Score = 1885 bits (4883), Expect = 0.0
 Identities = 944/1350 (69%), Positives = 1097/1350 (81%), Gaps = 29/1350 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRGGFMAGLSGASLELVCHYKLQGNVETMAVLSRG-G 3789
            +Y+VR+ E+D     +     E + GG M GLSGA LELVCHY+L GNVE+MA+LS G  
Sbjct: 68   IYLVRIQEDDGRPDARPGG--EQRGGGMMDGLSGARLELVCHYRLHGNVESMAILSLGVD 125

Query: 3788 DKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLVK 3609
            D+SKRRDSI+LAF DAK++VLE+DDS  GLRTSSMHCFEGP+W +L+RGRE FARGPL+K
Sbjct: 126  DRSKRRDSIVLAFQDAKLTVLEYDDSTHGLRTSSMHCFEGPDWHFLKRGRERFARGPLIK 185

Query: 3608 VDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDMK 3429
             DP GRC G L +GL+MIILK+AQA              GT  ARIESSYVI+L +LDMK
Sbjct: 186  ADPLGRCGGALVYGLQMIILKSAQAGQGLVGDDEPASLGGTFPARIESSYVINLHDLDMK 245

Query: 3428 HVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAINL 3249
            HVKDF F+HGYIEP MVILHERE TWAGR+SWKHHTCMICALSI+TT KQHP+IWSA+NL
Sbjct: 246  HVKDFTFVHGYIEPVMVILHEREPTWAGRISWKHHTCMICALSISTTLKQHPMIWSAVNL 305

Query: 3248 PHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVEL 3069
            PHDA KLLAVPS +GGVLVI AN IHYHSQ  SC+L LN+FA   + S E+P+S+ +VEL
Sbjct: 306  PHDASKLLAVPSPIGGVLVICANTIHYHSQSASCSLGLNNFANQPENSSEMPKSNINVEL 365

Query: 3068 DAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFFF 2889
            DAANATWL  DVAM S+KTGELLLLTLV DGRVVQRL+L K +ASVLTSGI TIGSSFFF
Sbjct: 366  DAANATWLSHDVAMFSSKTGELLLLTLVYDGRVVQRLDLMKSKASVLTSGITTIGSSFFF 425

Query: 2888 LGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGEE 2709
            LGSRLGDS+LVQY+   GT+  T+ ++K+EV DIEGD PSAKRLR  SS+ LQ++ SGEE
Sbjct: 426  LGSRLGDSLLVQYS--CGTSTPTTANMKDEVADIEGDGPSAKRLRRMSSDALQEVVSGEE 483

Query: 2708 LSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELVC 2529
            LSL+S+APN SE  QK FSFAVRDSL+N+GPLKDF+Y LRINADPNA GI+KQSNYELVC
Sbjct: 484  LSLYSTAPNSSESAQKIFSFAVRDSLVNIGPLKDFSYSLRINADPNATGIAKQSNYELVC 543

Query: 2528 CSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYHA 2349
            CSGHGKNG+LC+LQQ++RPELITEVELPGCKGIWTVYHKS+RGH           DEYHA
Sbjct: 544  CSGHGKNGALCMLQQSIRPELITEVELPGCKGIWTVYHKSSRGHTADPSKTMSEDDEYHA 603

Query: 2348 YLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDGS 2169
            YLIISL+++TMVLETAD LGEVTE+V YY KGSTI+AGNLFGRRRV+Q++A GARILDGS
Sbjct: 604  YLIISLEARTMVLETADDLGEVTETVDYY-KGSTISAGNLFGRRRVVQIFAHGARILDGS 662

Query: 2168 YMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSS-------- 2013
            YMTQEL+ G             AV SV+IADP++LL+MTDGSIQLLVGDPS+        
Sbjct: 663  YMTQELNFGGHNSDSTTNSELSAVASVSIADPFILLKMTDGSIQLLVGDPSACTVSVSVP 722

Query: 2012 -------------XXXXXXXXXXXXXXTSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVVC 1872
                                       TSTDAWLSTG+ E IDG DG+ HDQGD+YC+VC
Sbjct: 723  AIFANSTKSISTCTLYHDKGPEPWLRKTSTDAWLSTGIAETIDGNDGSYHDQGDVYCLVC 782

Query: 1871 YESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVM--KE 1698
            Y++G L+IFDVPTF CVFSV+ FISGKSHLVD +    +   Q NK K SE +KV   KE
Sbjct: 783  YDNGRLDIFDVPTFKCVFSVENFISGKSHLVDAYILEPTISTQVNKEKMSEGVKVQAKKE 842

Query: 1697 DAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXXX 1518
              +NMK+VELAM +WS Q++RPFLF +L DGTMLCYHAY+YEG ++  K+E+ V      
Sbjct: 843  TPENMKIVELAMHQWSSQYSRPFLFAILNDGTMLCYHAYIYEGPEHAAKVEDVVSPHNAI 902

Query: 1517 XXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWFM 1338
                         RF RV L+   R+ES  +    R+TMFKNVGGYQGLFL+GSRPAWFM
Sbjct: 903  DISNISTSRLRNLRFVRVSLDITAREESPDSVMRPRITMFKNVGGYQGLFLTGSRPAWFM 962

Query: 1337 VCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQK 1158
            VCRERLR+HPQLCDGS+VAFTVLHNVNCNHGLIYVTSQG+LKICQLPS+ +YD+YWPVQK
Sbjct: 963  VCRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGYLKICQLPSVFNYDSYWPVQK 1022

Query: 1157 IPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQKS 978
            +PLRGTPHQVTYF+EKNLYPLI+S+PV +PLNQVLSSL D D  +QT+ +++  D+LQK 
Sbjct: 1023 VPLRGTPHQVTYFAEKNLYPLIISVPVVRPLNQVLSSLADQDIGHQTDRESVSSDDLQKF 1082

Query: 977  YTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTAY 798
            Y+++EFEVRILEPEKSGG W+TRA +PMQ +ENALTVR++TLFNTTT+ENE+L+A+GTAY
Sbjct: 1083 YSVDEFEVRILEPEKSGGHWETRAILPMQTSENALTVRVITLFNTTTRENESLLAIGTAY 1142

Query: 797  VQGEDVAARGRILLYSIGHNAENSQIL-VTEVYSKELKGAISALASLQGHLLLASGPKVI 621
            VQGEDVAARGR+LLYS   N+ENSQ L V EVYSKELKGA+SALA+LQGHLL+ASGPK+ 
Sbjct: 1143 VQGEDVAARGRVLLYSFSKNSENSQNLQVLEVYSKELKGAVSALAALQGHLLIASGPKIT 1202

Query: 620  LHKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDF 441
            LHKWTG+ELNGVAF+D  PLHVVSLNIVKNFIL+GDIHKSIYFL+WKEQGAQL+LLAKDF
Sbjct: 1203 LHKWTGSELNGVAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQLSLLAKDF 1261

Query: 440  GTLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTK 261
            GTLDC++TEFLIDGSTLSLVV+D+QKNIQIFYYAPKM ESWKGQKLL RAEFH GAHVTK
Sbjct: 1262 GTLDCYATEFLIDGSTLSLVVSDDQKNIQIFYYAPKMLESWKGQKLLCRAEFHAGAHVTK 1321

Query: 260  FLRLQMLPAS-DRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVD 93
            FLRLQMLP S DRT A TGS    RFALLFGTLDGSIGC+APLDEL FRRLQTLQR+LVD
Sbjct: 1322 FLRLQMLPTSADRTTAATGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQTLQRKLVD 1381

Query: 92   AVPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            AVPH+ GLNP++FRQF + G+AH+PGPDNM
Sbjct: 1382 AVPHVCGLNPRSFRQFRANGKAHRPGPDNM 1411


>ref|XP_010918168.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1
            isoform X2 [Elaeis guineensis]
          Length = 1455

 Score = 1883 bits (4878), Expect = 0.0
 Identities = 949/1350 (70%), Positives = 1092/1350 (80%), Gaps = 29/1350 (2%)
 Frame = -1

Query: 3965 VYIVRVHEEDDSKGTKSSSQLEPKRG-GFMAGLSGASLELVCHYKLQGNVETMAVLSRG- 3792
            +Y+VR+ E+D     +   +   +RG G   GLSGA LELVCHY+L GNVE+MA+LS G 
Sbjct: 68   IYLVRIQEDDGRPAARPGGE---QRGVGITDGLSGARLELVCHYRLHGNVESMAILSLGV 124

Query: 3791 GDKSKRRDSIILAFADAKISVLEFDDSIDGLRTSSMHCFEGPEWQYLRRGRESFARGPLV 3612
             D+SKRRDSI+LAF DAK++VLE+DDS  GLR SSMHCFEGP+W +L+RGRE FARGPLV
Sbjct: 125  DDRSKRRDSIVLAFQDAKLTVLEYDDSTHGLRASSMHCFEGPDWHFLKRGRERFARGPLV 184

Query: 3611 KVDPQGRCSGVLAFGLEMIILKAAQAXXXXXXXXXXXXXXGTECARIESSYVISLRELDM 3432
            K DP GRC G L +GL+MIILK+AQA               T  ARIESSYVI+L +LDM
Sbjct: 185  KADPLGRCCGALIYGLQMIILKSAQAGQGLVGDDEPASSGSTFPARIESSYVINLHDLDM 244

Query: 3431 KHVKDFVFLHGYIEPTMVILHERELTWAGRVSWKHHTCMICALSINTTSKQHPLIWSAIN 3252
            KHVKDF F+HGYIEP MVILHERE TWAGR+SWKHHTC I ALSI+TT KQHP+IWSA+N
Sbjct: 245  KHVKDFTFVHGYIEPVMVILHEREPTWAGRISWKHHTCTISALSISTTLKQHPMIWSAVN 304

Query: 3251 LPHDAYKLLAVPSKMGGVLVISANAIHYHSQLTSCALALNHFAVPADMSQELPRSSFSVE 3072
            LPHDAYKLLAVPS +GGVLVI AN IHYHSQ  SC+L LN+FA   + S E+P+S+ +VE
Sbjct: 305  LPHDAYKLLAVPSPIGGVLVICANTIHYHSQSASCSLGLNNFANQPENSSEMPKSNINVE 364

Query: 3071 LDAANATWLLPDVAMLSTKTGELLLLTLVSDGRVVQRLELSKFRASVLTSGIATIGSSFF 2892
            LDAANATWL  DVAM S+KTGELLLLTLV DGRVVQRL+L K +ASVLTSGI  IGSSFF
Sbjct: 365  LDAANATWLSHDVAMFSSKTGELLLLTLVYDGRVVQRLDLMKSKASVLTSGITAIGSSFF 424

Query: 2891 FLGSRLGDSMLVQYTSGVGTAASTSGHVKEEVGDIEGDAPSAKRLRLASSETLQDIASGE 2712
            FLGSRLGDS+LVQY  G GT+  T+ ++K+EV DIE D  SAKRLR  SS+ LQ++ SGE
Sbjct: 425  FLGSRLGDSLLVQY--GCGTSTPTTANMKDEVADIEVDGLSAKRLRRMSSDALQEVVSGE 482

Query: 2711 ELSLFSSAPNMSELPQKSFSFAVRDSLINVGPLKDFAYGLRINADPNAVGISKQSNYELV 2532
            ELSL+S+APN SE  QKSFSFAVRDSL+N+GPLKDF+Y LRINADPNA GI+KQSNYELV
Sbjct: 483  ELSLYSTAPNSSESAQKSFSFAVRDSLVNIGPLKDFSYSLRINADPNATGIAKQSNYELV 542

Query: 2531 CCSGHGKNGSLCVLQQTVRPELITEVELPGCKGIWTVYHKSTRGHXXXXXXXXXXXDEYH 2352
            CCSGHGKNG+LCVLQQ+VRPELITEVELPGCKGIWTVYHKS+RGH           DEYH
Sbjct: 543  CCSGHGKNGALCVLQQSVRPELITEVELPGCKGIWTVYHKSSRGHTADSSKTMPEDDEYH 602

Query: 2351 AYLIISLQSKTMVLETADTLGEVTESVGYYIKGSTIAAGNLFGRRRVIQVYARGARILDG 2172
            AYLIISL+++TMVLETAD LGEVTE+V YY KGSTI+AGNLFGRRRV+Q++A GARILDG
Sbjct: 603  AYLIISLEARTMVLETADDLGEVTETVDYY-KGSTISAGNLFGRRRVVQIFAHGARILDG 661

Query: 2171 SYMTQELSLGXXXXXXXXXXXXXAVLSVTIADPYVLLRMTDGSIQLLVGDPSS------- 2013
            SYMTQEL+ G             AV SV+IADPYVLL+MTDGSIQLLVGDPS+       
Sbjct: 662  SYMTQELNFGGHNSDSTTNSEVSAVASVSIADPYVLLKMTDGSIQLLVGDPSACTVSVNV 721

Query: 2012 --------------XXXXXXXXXXXXXXTSTDAWLSTGVGEAIDGTDGAMHDQGDIYCVV 1875
                                        TSTDAWLSTG+ E IDG+DG+ HDQGD+YC+V
Sbjct: 722  PPIFANSTKLISACTLYHDKGPEPWLRKTSTDAWLSTGIAEPIDGSDGSYHDQGDVYCLV 781

Query: 1874 CYESGTLEIFDVPTFNCVFSVDKFISGKSHLVDTFTGVMSNDPQKNKNKNSEDIKVM--K 1701
            CYE+G L+IFDVPTF CVFSV+ FISGK+HLVD +    +   Q NK K  E  KV   K
Sbjct: 782  CYENGRLDIFDVPTFKCVFSVENFISGKTHLVDAYIPEPTTSTQVNKEKMFEGAKVQAKK 841

Query: 1700 EDAQNMKVVELAMQKWSGQHTRPFLFGMLTDGTMLCYHAYLYEGQDNTPKIEEAVXXXXX 1521
            E  +NMK+VELAMQ+W GQ++RPFLF +L DGTMLCYHAY+YEG +N PK+E+ V     
Sbjct: 842  ETPENMKIVELAMQRWFGQYSRPFLFAILNDGTMLCYHAYIYEGPENAPKVEDVVSPHNG 901

Query: 1520 XXXXXXXXXXXXXXRFARVPLETYTRQESSSTGPSQRMTMFKNVGGYQGLFLSGSRPAWF 1341
                          RF RV L+   R+ES  +    R+ +FKNVGGYQGLFL+GSRPAWF
Sbjct: 902  MDISNMSSSRLRNLRFIRVALDITAREESPDSVTQPRIMVFKNVGGYQGLFLTGSRPAWF 961

Query: 1340 MVCRERLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSLLSYDNYWPVQ 1161
            MVCRERLRIHPQLCDGS+VAFTVLHNVNCNHGLIYVTSQG+LKICQLPS+ +YD+YWPVQ
Sbjct: 962  MVCRERLRIHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGYLKICQLPSVFNYDSYWPVQ 1021

Query: 1160 KIPLRGTPHQVTYFSEKNLYPLIVSIPVAKPLNQVLSSLVDLDASNQTEHDNIGPDELQK 981
            K+PLRGTPHQVTYF+EKNLYPLI+S+PV KPLNQVLSSL D D  +QT+ ++I  D+LQK
Sbjct: 1022 KVPLRGTPHQVTYFAEKNLYPLIISVPVVKPLNQVLSSLADQDIGHQTDRESINSDDLQK 1081

Query: 980  SYTIEEFEVRILEPEKSGGPWQTRATIPMQNAENALTVRMVTLFNTTTKENETLMAVGTA 801
             Y+++EFEVRILEPEKSGG W+TRATIPMQ +ENALTVR++TLFNTTT+ENE+L+A+GTA
Sbjct: 1082 FYSVDEFEVRILEPEKSGGCWETRATIPMQTSENALTVRVITLFNTTTRENESLLAIGTA 1141

Query: 800  YVQGEDVAARGRILLYSIGHNAENSQILVTEVYSKELKGAISALASLQGHLLLASGPKVI 621
            YVQGEDVAARGR+LLYS   N+ENSQ LV EVYSKELKGA+SALASLQGHLL+ASGPK+ 
Sbjct: 1142 YVQGEDVAARGRVLLYSFSKNSENSQNLVLEVYSKELKGAVSALASLQGHLLIASGPKIT 1201

Query: 620  LHKWTGTELNGVAFHDTPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLNLLAKDF 441
            LHKWTG+ELNGVAF+D  PLHVVSLNIVKNFIL+GDIHKSIYFL+WKEQGAQL+LLAKDF
Sbjct: 1202 LHKWTGSELNGVAFYDA-PLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQLSLLAKDF 1260

Query: 440  GTLDCFSTEFLIDGSTLSLVVTDEQKNIQIFYYAPKMSESWKGQKLLSRAEFHIGAHVTK 261
            GTLDC++TEFLIDGSTLSLVV+D+QKNIQIFYYAPKM ESWKGQKLL RAEFH GAHVTK
Sbjct: 1261 GTLDCYATEFLIDGSTLSLVVSDDQKNIQIFYYAPKMLESWKGQKLLCRAEFHAGAHVTK 1320

Query: 260  FLRLQMLPAS-DRTGATTGS---GRFALLFGTLDGSIGCVAPLDELNFRRLQTLQRRLVD 93
            FLRLQMLP S DRT A TGS    RFALLF TLDGSIGC+APLDEL FRRLQTLQR+LVD
Sbjct: 1321 FLRLQMLPTSADRTTAATGSDKTNRFALLFSTLDGSIGCIAPLDELTFRRLQTLQRKLVD 1380

Query: 92   AVPHMGGLNPKAFRQFHSKGRAHKPGPDNM 3
            AVPH+ GLNP++FRQF + G+AH+PGPDNM
Sbjct: 1381 AVPHVCGLNPRSFRQFRANGKAHRPGPDNM 1410