BLASTX nr result
ID: Papaver30_contig00027663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00027663
(1258 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010250460.1| PREDICTED: pentatricopeptide repeat-containi... 333 2e-88
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi... 330 2e-87
ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citr... 330 2e-87
ref|XP_008231210.1| PREDICTED: pentatricopeptide repeat-containi... 329 3e-87
ref|XP_010090943.1| hypothetical protein L484_007578 [Morus nota... 326 3e-86
ref|XP_011003604.1| PREDICTED: pentatricopeptide repeat-containi... 320 2e-84
ref|XP_010528110.1| PREDICTED: pentatricopeptide repeat-containi... 320 2e-84
ref|XP_010514322.1| PREDICTED: pentatricopeptide repeat-containi... 320 2e-84
ref|XP_012067416.1| PREDICTED: pentatricopeptide repeat-containi... 320 2e-84
ref|XP_010066387.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 314 9e-83
ref|NP_189297.1| pentatricopeptide repeat-containing protein [Ar... 314 1e-82
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ... 313 2e-82
ref|XP_010425378.1| PREDICTED: pentatricopeptide repeat-containi... 312 3e-82
ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Caps... 312 3e-82
ref|XP_010502600.1| PREDICTED: pentatricopeptide repeat-containi... 310 2e-81
ref|XP_013644722.1| PREDICTED: pentatricopeptide repeat-containi... 308 5e-81
ref|XP_002512787.1| pentatricopeptide repeat-containing protein,... 308 6e-81
ref|XP_009152041.1| PREDICTED: pentatricopeptide repeat-containi... 306 3e-80
ref|XP_011651588.1| PREDICTED: pentatricopeptide repeat-containi... 304 1e-79
ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutr... 302 3e-79
>ref|XP_010250460.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic [Nelumbo nucifera]
Length = 434
Score = 333 bits (853), Expect = 2e-88
Identities = 191/391 (48%), Positives = 247/391 (63%)
Frame = -1
Query: 1174 LSYPPDAVTNYYSNNSPFLHLXXXXXXRFDSREALFLIRECNSFKQLKQIHAQVLRNGLL 995
LS+ PDA+ SP ++ FDSREAL ++ C FKQLKQIH+Q+LR GL
Sbjct: 6 LSFSPDALPR---TPSPSSNIRRPRTRTFDSREALSFLQRCTDFKQLKQIHSQILRTGLS 62
Query: 994 HHSNNQXXXXXXXXXLCPSTTSSPSNHFNNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTV 815
H LC S + YA F WNL+IR HT+
Sbjct: 63 HDQ----VLVANMLRLCSS--------YGQMGYASLLFYQLQSPTT--FAWNLMIRGHTL 108
Query: 814 DYSGPVSAHRALLLYSLMIQRSIPHDHFTFPFVIRACTLLSSSLPLGKALHGRSVVTGFY 635
+ + ALL Y+LM+ R + D FTFPFVIRAC ++SS++ GK +HG + GF+
Sbjct: 109 NDN----PREALLTYNLMMCRGVRPDKFTFPFVIRAC-IVSSAIDKGKEVHGVAFKLGFW 163
Query: 634 TDIFVQNTLMDMYFKYGDSVSGSMVFDKMSDAKRTVVSWTTMLVGLVSAEAIKNARAVFD 455
D FVQNT+MD+YFK GD G MVFDKM + VVSWTTM+ GLV+ + AR +F+
Sbjct: 164 GDAFVQNTVMDLYFKCGDLGFGCMVFDKMP--VKNVVSWTTMVSGLVAHGELDAARGIFE 221
Query: 454 LMPDRNVVSWTAMIGGYARNGQPQEAFRLFQCMVDDSIRPNEYTLVNLLVACTEMGSLKL 275
+M +NVVSWT MI G+ARN P+EAF LF+ M +++RPNE+TLV+LL+ACTE+GSL+L
Sbjct: 222 VMQAKNVVSWTVMINGFARNRHPEEAFELFRRMQLENVRPNEFTLVSLLIACTELGSLRL 281
Query: 274 GSSIHDXXXXXXXXXXXXXGTALIDMYSKCGSLEDARKVFDEMPWRSLGTWNSMITSLGV 95
GS IHD GTALIDMYSKCGS++DA+KVFD+M +SL TWNSMITSLGV
Sbjct: 282 GSWIHDFALKNGFELGVFLGTALIDMYSKCGSIDDAKKVFDKMQKKSLATWNSMITSLGV 341
Query: 94 HGKGYEALSLFSTMEKAASLDNNIQPDAVTF 2
HG+G EAL +F ME+A +++PDA+TF
Sbjct: 342 HGRGEEALDVFVEMERA-----DVRPDAITF 367
>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568829286|ref|XP_006468954.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568829288|ref|XP_006468955.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 435
Score = 330 bits (846), Expect = 2e-87
Identities = 198/395 (50%), Positives = 251/395 (63%)
Frame = -1
Query: 1186 MVEYLSYPPDAVTNYYSNNSPFLHLXXXXXXRFDSREALFLIRECNSFKQLKQIHAQVLR 1007
MV LSY PD +T+ +P L+ +F +EAL L+R+C +F QLK IHA+++R
Sbjct: 1 MVVCLSYTPDLLTH----KTPLLN-SSITRLKFGYQEALVLLRKCRNFGQLKLIHAKIIR 55
Query: 1006 NGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHFNNTDYAXXXXXXXXXXXXXTFNWNLVIR 827
+GL +N LC + + TD+A F WNL+IR
Sbjct: 56 HGL----SNDQLLVRKLLDLC--------SFYGKTDHALLVFSQIQCPHV--FTWNLMIR 101
Query: 826 SHTVDYSGPVSAHRALLLYSLMIQRSIPHDHFTFPFVIRACTLLSSSLPLGKALHGRSVV 647
+ T++ S + +ALLLY+LMI D FTFPFVI+AC + S ++ GK +HG +V
Sbjct: 102 ALTINGS----SQQALLLYNLMICNGFRPDKFTFPFVIKAC-VASLAIEKGKEVHGLAVK 156
Query: 646 TGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDKMSDAKRTVVSWTTMLVGLVSAEAIKNAR 467
GF D+FVQNTLMD+YFK GD G MVFDKM R+VVSWTTM+ GL ++ + AR
Sbjct: 157 AGFSRDMFVQNTLMDLYFKCGDVDGGRMVFDKMR--VRSVVSWTTMISGLAASGDLDAAR 214
Query: 466 AVFDLMPDRNVVSWTAMIGGYARNGQPQEAFRLFQCMVDDSIRPNEYTLVNLLVACTEMG 287
VF+ M RNVVSWTAMI Y RN + QEAF LFQ M+ D++RPNE+TLV+LL ACTE+
Sbjct: 215 RVFEQMQTRNVVSWTAMINAYVRNERAQEAFELFQRMLLDNVRPNEFTLVSLLQACTELR 274
Query: 286 SLKLGSSIHDXXXXXXXXXXXXXGTALIDMYSKCGSLEDARKVFDEMPWRSLGTWNSMIT 107
SLKLG+ IHD GTALIDMYSKCGSLEDARKVFD+M ++L TWNSMIT
Sbjct: 275 SLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDARKVFDKMEIKNLATWNSMIT 334
Query: 106 SLGVHGKGYEALSLFSTMEKAASLDNNIQPDAVTF 2
SLGVHG G EAL+LF+ ME A N+ PDA+TF
Sbjct: 335 SLGVHGHGEEALALFAQMENA-----NVHPDAITF 364
>ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citrus clementina]
gi|557549465|gb|ESR60094.1| hypothetical protein
CICLE_v10018065mg [Citrus clementina]
Length = 438
Score = 330 bits (845), Expect = 2e-87
Identities = 197/395 (49%), Positives = 250/395 (63%)
Frame = -1
Query: 1186 MVEYLSYPPDAVTNYYSNNSPFLHLXXXXXXRFDSREALFLIRECNSFKQLKQIHAQVLR 1007
MV LSY PD +T+ +P L+ +F +EAL L+R+C +F QLK IHA+++R
Sbjct: 1 MVVCLSYTPDPLTH----KTPLLN-SSITRLKFGYQEALVLLRKCRNFGQLKLIHAKIIR 55
Query: 1006 NGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHFNNTDYAXXXXXXXXXXXXXTFNWNLVIR 827
+GL +N LC + + TD+A F WNL+IR
Sbjct: 56 HGL----SNDQLLVRKLLDLC--------SFYGKTDHALLVFSQIQCPHV--FTWNLMIR 101
Query: 826 SHTVDYSGPVSAHRALLLYSLMIQRSIPHDHFTFPFVIRACTLLSSSLPLGKALHGRSVV 647
+ T++ S + +ALLLY+LMI D FTFPFV +AC + S ++ GK +HG +V
Sbjct: 102 ALTINGS----SRQALLLYNLMICNGFRPDKFTFPFVFKAC-ITSLAIEKGKEVHGLAVK 156
Query: 646 TGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDKMSDAKRTVVSWTTMLVGLVSAEAIKNAR 467
GF D+FVQNTLMD+YFK GD G VFDKM R+VVSWTTM+ GL ++ + AR
Sbjct: 157 AGFSRDMFVQNTLMDLYFKCGDVNGGRKVFDKMR--VRSVVSWTTMISGLAASGDLDAAR 214
Query: 466 AVFDLMPDRNVVSWTAMIGGYARNGQPQEAFRLFQCMVDDSIRPNEYTLVNLLVACTEMG 287
VF+ M RNVVSWTAMI Y RN + EAF LFQ M+ D++RPNE+TLV+LL ACTE+G
Sbjct: 215 RVFEQMQTRNVVSWTAMINAYVRNERAHEAFELFQRMLLDNVRPNEFTLVSLLQACTELG 274
Query: 286 SLKLGSSIHDXXXXXXXXXXXXXGTALIDMYSKCGSLEDARKVFDEMPWRSLGTWNSMIT 107
SLKLG+ IHD GTALIDMYSKCGSLEDARKVFD+M ++L TWNSMIT
Sbjct: 275 SLKLGNWIHDFALKNGFVLGVYLGTALIDMYSKCGSLEDARKVFDKMEIKNLATWNSMIT 334
Query: 106 SLGVHGKGYEALSLFSTMEKAASLDNNIQPDAVTF 2
SLGVHG G EAL+LF+ ME A N+QPDA+TF
Sbjct: 335 SLGVHGHGEEALALFAQMENA-----NVQPDAITF 364
>ref|XP_008231210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic [Prunus mume]
gi|645250432|ref|XP_008231211.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic [Prunus mume]
Length = 439
Score = 329 bits (843), Expect = 3e-87
Identities = 189/363 (52%), Positives = 232/363 (63%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F S+EAL L++ C +FK LKQIHA+++RNGL H LC S +
Sbjct: 27 FGSQEALTLLQNCATFKHLKQIHAKIIRNGLSHDQ----LLIRKLIHLCSS--------Y 74
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHF 731
DYA F WNL+I S+T++ + ALLLYSLMI++ P D F
Sbjct: 75 GKMDYATLIFHQIQGPLT--FTWNLMIMSYTINGC----SQEALLLYSLMIRQGFPPDKF 128
Query: 730 TFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDK 551
TFPFVI+AC + SS+ GK +HG S+ F D+FVQNTLMD YFK G+ G VF+K
Sbjct: 129 TFPFVIKAC-IASSAFEQGKVVHGLSIKNSFSRDMFVQNTLMDFYFKCGEIDCGCRVFEK 187
Query: 550 MSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFR 371
M R VVSWTTM+ GLV+ + ARAVF+ MP +NVVSWTAM+ GY RN QP+EAF
Sbjct: 188 MR--VRNVVSWTTMISGLVACGELHAARAVFERMPAKNVVSWTAMMNGYVRNQQPEEAFE 245
Query: 370 LFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMYS 191
LF M +RPNE+TLV+LL ACT++GSLKLG IHD GTALID YS
Sbjct: 246 LFWRMQVGGVRPNEFTLVSLLKACTQLGSLKLGRWIHDFALKNGFKLDVFLGTALIDTYS 305
Query: 190 KCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPDA 11
KCGSLEDAR+VFDEM +SL TWN+MITSLGVHG G EAL+LF+ MEK N++PDA
Sbjct: 306 KCGSLEDARRVFDEMRIKSLATWNAMITSLGVHGFGEEALALFAEMEKL-----NVRPDA 360
Query: 10 VTF 2
+TF
Sbjct: 361 ITF 363
>ref|XP_010090943.1| hypothetical protein L484_007578 [Morus notabilis]
gi|587851274|gb|EXB41428.1| hypothetical protein
L484_007578 [Morus notabilis]
Length = 428
Score = 326 bits (835), Expect = 3e-86
Identities = 182/363 (50%), Positives = 233/363 (64%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F S EA ++ C SF+QLKQIHA+++R+GL H C ++
Sbjct: 20 FGSEEAFTFLQNCTSFRQLKQIHAKIIRSGLSHDQ----LLLRKMLQFCSTS-------- 67
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHF 731
N DYA F WNL+IR++T++ S +ALLL++LM R P D F
Sbjct: 68 GNMDYAALVFRHQIPYPLT-FTWNLMIRAYTLN----ASPRQALLLFTLMTSRGFPPDKF 122
Query: 730 TFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDK 551
TFPFVI+ACT S+ P G A+HG ++ F DIFVQNTLMD YFK GD+ SG VFDK
Sbjct: 123 TFPFVIKACTASSAFRP-GDAVHGLAIKARFSGDIFVQNTLMDFYFKCGDAHSGRKVFDK 181
Query: 550 MSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFR 371
M R +VSWTTM+ GLV + ++ ARA+F+ MP +NVVSWT MI GY + QP+EAF+
Sbjct: 182 MR--VRNLVSWTTMVTGLVGSGDLRAARAIFEQMPAKNVVSWTIMIDGYVEDRQPEEAFK 239
Query: 370 LFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMYS 191
LF+ M D++ PNE+TLV+LL ACTE+GSLKLG +HD GTALID YS
Sbjct: 240 LFRRMQLDNVSPNEFTLVSLLKACTELGSLKLGRWVHDFALKNGFELDVFFGTALIDTYS 299
Query: 190 KCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPDA 11
KCGSLEDAR+VFD+M +S+ TWNSMITSLGVHG G EAL+LF+ ME+ N++PD
Sbjct: 300 KCGSLEDARRVFDKMQAKSIATWNSMITSLGVHGFGEEALALFAEMER-----QNVRPDE 354
Query: 10 VTF 2
+TF
Sbjct: 355 ITF 357
Score = 77.4 bits (189), Expect = 2e-11
Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 2/239 (0%)
Frame = -1
Query: 847 NWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHFTFPFVIRACTLLSSSLPLGKA 668
+W ++I + D A L+ M ++ + FT +++ACT L S L LG+
Sbjct: 220 SWTIMIDGYVEDRQ----PEEAFKLFRRMQLDNVSPNEFTLVSLLKACTELGS-LKLGRW 274
Query: 667 LHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDKMSDAKRTVVSWTTMLVGLVSA 488
+H ++ GF D+F L+D Y K G
Sbjct: 275 VHDFALKNGFELDVFFGTALIDTYSKCG-------------------------------- 302
Query: 487 EAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFRLFQCMVDDSIRPNEYTLVNLL 308
++++AR VFD M +++ +W +MI +G +EA LF M ++RP+E T V +L
Sbjct: 303 -SLEDARRVFDKMQAKSIATWNSMITSLGVHGFGEEALALFAEMERQNVRPDEITFVGIL 361
Query: 307 VACTEMGSLK-LGSSIHDXXXXXXXXXXXXXGTALIDMYSKCGSLEDARKVFDEMP-WR 137
AC + S+ +I++YS+ G L++ ++ + MP WR
Sbjct: 362 SACLQKNSVSDCRKYFEYMNKRYRILPIKEHYICMIELYSRAGMLDEVVRLVNAMPVWR 420
>ref|XP_011003604.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic [Populus euphratica]
gi|743919173|ref|XP_011003605.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic [Populus euphratica]
Length = 491
Score = 320 bits (820), Expect = 2e-84
Identities = 191/392 (48%), Positives = 237/392 (60%), Gaps = 5/392 (1%)
Frame = -1
Query: 1162 PDAVTNYYSNNSPFL----HLXXXXXXRFDSREALFLIRECNSFKQLKQIHAQVLRNGLL 995
PDA+ SPFL H +F S EAL L++ C SF LK +H +++RN L
Sbjct: 10 PDALIISSRRRSPFLNSHYHTSSTYWPKFGSAEALLLLQNCTSFNHLKLVHGKIIRNAL- 68
Query: 994 HHSNNQXXXXXXXXXLCPSTTSSPSNHFNNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTV 815
S NQ C S + DYA F WN +IR++T+
Sbjct: 69 --SANQLLVRKLIHL-CSS--------YGRLDYAALLFHQVQEPHT--FTWNFLIRTYTI 115
Query: 814 D-YSGPVSAHRALLLYSLMIQRSIPHDHFTFPFVIRACTLLSSSLPLGKALHGRSVVTGF 638
YS +ALLLY+LMI+R P D FTFPFV++AC L S S+ GK +HG ++ TGF
Sbjct: 116 HGYS-----MKALLLYNLMIRRGFPPDKFTFPFVVKAC-LASGSIRKGKEVHGLAIKTGF 169
Query: 637 YTDIFVQNTLMDMYFKYGDSVSGSMVFDKMSDAKRTVVSWTTMLVGLVSAEAIKNARAVF 458
D+F+ NTLMD+YF GD G VFDKM R VVSWTT + GLV + AR F
Sbjct: 170 SKDMFLYNTLMDLYFSCGDEGYGRKVFDKMR--VRNVVSWTTFIAGLVVCGDLDAARRAF 227
Query: 457 DLMPDRNVVSWTAMIGGYARNGQPQEAFRLFQCMVDDSIRPNEYTLVNLLVACTEMGSLK 278
D MP RNVVSWTA+I Y RN +P EAF LF M+ +++PNE+TLVNLL AC+++GSLK
Sbjct: 228 DQMPTRNVVSWTAIINAYVRNQRPHEAFELFWRMLLANVKPNEFTLVNLLKACSQLGSLK 287
Query: 277 LGSSIHDXXXXXXXXXXXXXGTALIDMYSKCGSLEDARKVFDEMPWRSLGTWNSMITSLG 98
LG IHD GTALIDMYSKCGSL+DAR+VF EM +SL TWN+MITSLG
Sbjct: 288 LGRWIHDYALKNGFDLGAFLGTALIDMYSKCGSLDDARQVFREMQIKSLATWNAMITSLG 347
Query: 97 VHGKGYEALSLFSTMEKAASLDNNIQPDAVTF 2
VHG G EALSLF+ ME+A N++PDA+TF
Sbjct: 348 VHGYGEEALSLFTKMEEA-----NVRPDAITF 374
>ref|XP_010528110.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic [Tarenaya hassleriana]
Length = 453
Score = 320 bits (819), Expect = 2e-84
Identities = 188/363 (51%), Positives = 232/363 (63%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F REALF +R C+SF QLKQIHA+++R+ L S +Q S+ F
Sbjct: 19 FRCREALFFLRNCSSFIQLKQIHAKIIRHSL---SQDQLIVRQLLHL---------SSSF 66
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHF 731
T YA F WNL+IRS ++ AL+L+ LMI D F
Sbjct: 67 GETQYASLVFRQLRSPST--FTWNLMIRSLCINDK----PREALVLFVLMISHPSTPDKF 120
Query: 730 TFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDK 551
TFPFVI+AC L SSSL LGK +HG +V GF +D+F+QNTLMDMYFK G S G VF+K
Sbjct: 121 TFPFVIKAC-LASSSLRLGKQVHGLAVKAGFSSDVFLQNTLMDMYFKCGLSDCGRKVFEK 179
Query: 550 MSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFR 371
M RT+VSWTTML GLVS + +AR +F+ MP RNVVSWTAMI Y +N +P EAFR
Sbjct: 180 MR--VRTIVSWTTMLNGLVSYGQLDSARTMFNQMPTRNVVSWTAMITAYVKNQRPDEAFR 237
Query: 370 LFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMYS 191
LF M D++RPNE+TLVNLL A T++GSL +G +HD GTALIDMYS
Sbjct: 238 LFCEMQVDNVRPNEFTLVNLLQASTQLGSLSMGRWVHDFAHKNGFPLDCFLGTALIDMYS 297
Query: 190 KCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPDA 11
KCGSL+DARKVF +M +SL TWN+MITSLGVHG G EALS+F ME L+++I+PDA
Sbjct: 298 KCGSLQDARKVFHKMQTKSLATWNAMITSLGVHGCGEEALSIFEQME----LESSIEPDA 353
Query: 10 VTF 2
+TF
Sbjct: 354 ITF 356
>ref|XP_010514322.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like [Camelina sativa]
Length = 451
Score = 320 bits (819), Expect = 2e-84
Identities = 185/365 (50%), Positives = 231/365 (63%), Gaps = 2/365 (0%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F S EA + +R C+SF QLKQIH +V+++ L +N+Q S S+ F
Sbjct: 12 FRSLEASYSLRTCSSFSQLKQIHTRVIKHNL---TNDQLLVRQLI---------SVSSSF 59
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPH-DH 734
T YA F WNL+IRS ++++ ALLL+ LM+ H D
Sbjct: 60 GETQYASLVFNQLQSPST--FTWNLMIRSLSLNHK----PREALLLFILMLTHHHSHFDK 113
Query: 733 FTFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFD 554
FTFPFVI+AC SSSL LG LHG ++ GF+ D+F QNTLMD+YFK+G G VFD
Sbjct: 114 FTFPFVIKACLASSSSLRLGTQLHGLAIKAGFFNDVFFQNTLMDLYFKFGKPDCGRKVFD 173
Query: 553 KMSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAF 374
KM R++VSWTTML GLVS + +A VF+ MP RNVVSWTAMI Y +N +P EAF
Sbjct: 174 KMPG--RSIVSWTTMLYGLVSNSQLDSAEIVFNQMPRRNVVSWTAMITAYVKNRRPDEAF 231
Query: 373 RLFQCMVDDS-IRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDM 197
+LF+ M DD ++PNEYT+VNLL A T++GSL +G +HD GTALIDM
Sbjct: 232 KLFRRMQDDDHVKPNEYTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVVDCFLGTALIDM 291
Query: 196 YSKCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQP 17
YSKCGSL+DARKVFD M +SL TWNSMITSLGVHG G EALSLF ME+ AS ++P
Sbjct: 292 YSKCGSLQDARKVFDVMQSKSLATWNSMITSLGVHGCGEEALSLFQDMEEEAS----VEP 347
Query: 16 DAVTF 2
DA+TF
Sbjct: 348 DAITF 352
>ref|XP_012067416.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like [Jatropha curcas]
gi|643735259|gb|KDP41900.1| hypothetical protein
JCGZ_26918 [Jatropha curcas]
Length = 484
Score = 320 bits (819), Expect = 2e-84
Identities = 189/386 (48%), Positives = 241/386 (62%), Gaps = 4/386 (1%)
Frame = -1
Query: 1147 NYYSNNSPFLHLXXXXXXR---FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQ 977
N S +PFL F S+EAL + + C++F LK +HA+++RNGL SN+Q
Sbjct: 10 NTLSTTTPFLSSQIQSHSNNPKFGSQEALIVFQNCSNFTHLKLVHAKIIRNGL---SNDQ 66
Query: 976 -XXXXXXXXXLCPSTTSSPSNHFNNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGP 800
C + DYA TF WN +IR++T +
Sbjct: 67 LLVRKLLHLCFC----------YGEIDYA--TLLFHQIQNPHTFTWNFMIRAYTKN---- 110
Query: 799 VSAHRALLLYSLMIQRSIPHDHFTFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFV 620
++ AL LY+LMI R P D FTFPFV++AC L SS+L GK +HG ++ TGF+ D F+
Sbjct: 111 GNSQEALFLYNLMICRGFPPDKFTFPFVVKAC-LSSSALDKGKEIHGFAIKTGFWKDTFL 169
Query: 619 QNTLMDMYFKYGDSVSGSMVFDKMSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDR 440
NTLMD+YFK GD G +FDKM R+VVSWTT + GLV++ + AR FD MP +
Sbjct: 170 HNTLMDLYFKCGDFDYGRKLFDKM--RVRSVVSWTTFVAGLVASGELDAARKAFDEMPMK 227
Query: 439 NVVSWTAMIGGYARNGQPQEAFRLFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIH 260
NVVSWTAMI GY +N + QEAF LF M D++RPNE+TLV LL ACTE+GSL+LGS IH
Sbjct: 228 NVVSWTAMINGYVKNQRAQEAFELFWRMQLDNVRPNEFTLVGLLKACTELGSLQLGSWIH 287
Query: 259 DXXXXXXXXXXXXXGTALIDMYSKCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGY 80
+ GTALIDMYSKCGSLEDA++VFD+M +SL TWNSMITSLGVHG G
Sbjct: 288 EYALKNGFKLGVFLGTALIDMYSKCGSLEDAKQVFDKMEIKSLATWNSMITSLGVHGFGK 347
Query: 79 EALSLFSTMEKAASLDNNIQPDAVTF 2
EAL+LF+ ME+A N+QPDA+TF
Sbjct: 348 EALALFARMEEA-----NVQPDAITF 368
>ref|XP_010066387.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26630, chloroplastic [Eucalyptus grandis]
Length = 480
Score = 314 bits (805), Expect = 9e-83
Identities = 179/363 (49%), Positives = 229/363 (63%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F + +AL +R C F QL+Q HA+++R+GL ++ +C S
Sbjct: 41 FGTEDALAALRRCADFGQLRQAHARIIRSGL----SSDQLLARKMIQVCSSR-------- 88
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHF 731
DYA TF WN++IR +T++ + RA+LLY+LMI + D F
Sbjct: 89 GQMDYA--ALVFRQIERPQTFTWNVMIREYTMN----GGSRRAILLYNLMICKGYAPDKF 142
Query: 730 TFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDK 551
TFPFV++AC + S + G+ +HG ++ GF D+F+QNTLMD+YFK GD G VF+K
Sbjct: 143 TFPFVVKAC-IDSLVIEKGREVHGMAIKAGFSRDVFLQNTLMDLYFKCGDRECGCRVFEK 201
Query: 550 MSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFR 371
M R+VVSWTTM+ GL++ + AR F+ MP +NVVSWTAMI GY +NGQPQEAF
Sbjct: 202 M--PVRSVVSWTTMISGLIACGDLDGARRTFEQMPAKNVVSWTAMINGYVKNGQPQEAFD 259
Query: 370 LFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMYS 191
LF+ M D + PNE+TLVNLL ACTE+GSLKLG IHD GTALIDMYS
Sbjct: 260 LFRRMQIDKVEPNEFTLVNLLKACTELGSLKLGRWIHDYALKNGFNLGVFLGTALIDMYS 319
Query: 190 KCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPDA 11
KC SLEDAR+VFDEM +SL TWN+MITSLGVHG G EAL+LF MEKA N+ PDA
Sbjct: 320 KCDSLEDARRVFDEMQIKSLVTWNAMITSLGVHGCGEEALALFGQMEKA-----NVVPDA 374
Query: 10 VTF 2
+TF
Sbjct: 375 ITF 377
>ref|NP_189297.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75275188|sp|Q38959.1|PP257_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g26630, chloroplastic; Flags: Precursor
gi|1402883|emb|CAA66814.1| hypothetical protein
[Arabidopsis thaliana] gi|1495263|emb|CAA66119.1| orf09
[Arabidopsis thaliana] gi|11994298|dbj|BAB01728.1|
unnamed protein product [Arabidopsis thaliana]
gi|20466384|gb|AAM20509.1| unknown protein [Arabidopsis
thaliana] gi|23198064|gb|AAN15559.1| unknown protein
[Arabidopsis thaliana] gi|332643668|gb|AEE77189.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 455
Score = 314 bits (804), Expect = 1e-82
Identities = 182/364 (50%), Positives = 230/364 (63%), Gaps = 1/364 (0%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F S EA + +R C++F QLKQIH +++++ L +N+Q S S+ F
Sbjct: 18 FRSPEASYFLRTCSNFSQLKQIHTKIIKHNL---TNDQLLVRQLI---------SVSSSF 65
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLM-IQRSIPHDH 734
T YA F WNL+IRS +V++ ALLL+ LM I D
Sbjct: 66 GETQYASLVFNQLQSPST--FTWNLMIRSLSVNHK----PREALLLFILMMISHQSQFDK 119
Query: 733 FTFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFD 554
FTFPFVI+AC L SSS+ LG +HG ++ GF+ D+F QNTLMD+YFK G SG VFD
Sbjct: 120 FTFPFVIKAC-LASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFD 178
Query: 553 KMSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAF 374
KM R++VSWTTML GLVS + +A VF+ MP RNVVSWTAMI Y +N +P EAF
Sbjct: 179 KMPG--RSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAF 236
Query: 373 RLFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMY 194
+LF+ M D ++PNE+T+VNLL A T++GSL +G +HD GTALIDMY
Sbjct: 237 QLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Query: 193 SKCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPD 14
SKCGSL+DARKVFD M +SL TWNSMITSLGVHG G EALSLF ME+ AS ++PD
Sbjct: 297 SKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEAS----VEPD 352
Query: 13 AVTF 2
A+TF
Sbjct: 353 AITF 356
>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322823|gb|EFH53244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 451
Score = 313 bits (802), Expect = 2e-82
Identities = 179/363 (49%), Positives = 228/363 (62%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F S EA + +R C++F QLKQIH +++++ L +N+Q S S+ F
Sbjct: 18 FRSPEASYFLRTCSNFSQLKQIHTKIIKHNL---TNDQLLVRQLI---------SVSSSF 65
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHF 731
T YA F WNL+IRS ++++ ALLL+ LM+ D F
Sbjct: 66 GETQYASLVFNQLQSPST--FTWNLMIRSLSLNHK----PREALLLFILMLSHQPQFDKF 119
Query: 730 TFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDK 551
TFPFVI+AC L SSSL LG +HG ++ GF+ D+F QNTLMD+YFK G G VFDK
Sbjct: 120 TFPFVIKAC-LASSSLRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDCGRKVFDK 178
Query: 550 MSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFR 371
M R++VSWTTML GLVS + +A VF+ MP RNVVSWTAMI Y +N +P EAF+
Sbjct: 179 MPG--RSIVSWTTMLYGLVSNSQLDSAEIVFNQMPTRNVVSWTAMITAYVKNRRPDEAFQ 236
Query: 370 LFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMYS 191
LF+ M D ++PNE+T+VNLL A T++GSL +G +HD GTALIDMYS
Sbjct: 237 LFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCYLGTALIDMYS 296
Query: 190 KCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPDA 11
KCGSL+DARKVFD M +SL TWNSMITSLGVHG G EAL LF ME+ AS ++PDA
Sbjct: 297 KCGSLQDARKVFDVMQSKSLATWNSMITSLGVHGCGEEALYLFEEMEEEAS----VEPDA 352
Query: 10 VTF 2
+TF
Sbjct: 353 ITF 355
>ref|XP_010425378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic [Camelina sativa]
Length = 460
Score = 312 bits (800), Expect = 3e-82
Identities = 185/366 (50%), Positives = 230/366 (62%), Gaps = 3/366 (0%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F S EA + +R C+SF QLKQIH +V+++ L +N+Q S S+ F
Sbjct: 19 FRSLEASYFLRTCSSFSQLKQIHTRVIKHNL---ANDQLLVRQLI---------SVSSSF 66
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMI-QRSIPHDH 734
T YA F WNL+IRS +V++ ALLL+ LM+ D
Sbjct: 67 GETQYASLVFNQLQSPST--FTWNLMIRSLSVNHK----PREALLLFILMLTHHRSQFDK 120
Query: 733 FTFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFD 554
FTFPFVI+AC SSSL LG +HG ++ GF+ D+F QNTLMD+YFK G G VFD
Sbjct: 121 FTFPFVIKACLASSSSLRLGTQVHGLAIKAGFFYDVFFQNTLMDLYFKCGKPNCGRKVFD 180
Query: 553 KMSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAF 374
KM R++VSWTTML GLVS + +A VF+ MP RNVVSWTAMI Y +N +P EAF
Sbjct: 181 KMPG--RSIVSWTTMLYGLVSNSQLDSAEIVFNQMPTRNVVSWTAMITAYVKNRRPDEAF 238
Query: 373 RLFQCM-VDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDM 197
+LF+ M VDD ++PNEYT+VNLL A T++GSL +G +HD GTALIDM
Sbjct: 239 QLFRRMQVDDHVKPNEYTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVVDCFLGTALIDM 298
Query: 196 YSKCGSLEDARKVFDEM-PWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQ 20
YSKCGSL+DARKVFD M +SL TWNSMITSLGVHG G EALSLF ME+ AS ++
Sbjct: 299 YSKCGSLQDARKVFDVMQSKKSLATWNSMITSLGVHGCGEEALSLFQDMEEEAS----VE 354
Query: 19 PDAVTF 2
PDA+TF
Sbjct: 355 PDAITF 360
>ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Capsella rubella]
gi|482559823|gb|EOA24014.1| hypothetical protein
CARUB_v10017228mg [Capsella rubella]
Length = 454
Score = 312 bits (800), Expect = 3e-82
Identities = 181/363 (49%), Positives = 229/363 (63%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F S EA +L+R C SF QLKQIH +++++ L +N+Q S S+ F
Sbjct: 18 FRSPEASYLLRTCLSFSQLKQIHTRIIKHNL---TNDQLLVRQLI---------SVSSSF 65
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHF 731
T YA F WNL+IRS +V++ ALLL+ LM+ D F
Sbjct: 66 GETKYASLVFNQLQSPST--FTWNLMIRSLSVNHK----PREALLLFILMLNHQSQFDKF 119
Query: 730 TFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDK 551
TFPFVI+AC L SSSL LG +HG ++ GF+ D+F QNTLMD+YFK G G VFDK
Sbjct: 120 TFPFVIKAC-LASSSLRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKLDLGRKVFDK 178
Query: 550 MSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFR 371
M R++VSWTT+L GLVS + +A+ VF+ MP RNVVSWTAMI Y +N +P EAF+
Sbjct: 179 MPG--RSIVSWTTLLHGLVSNCQLDSAKIVFNQMPTRNVVSWTAMITAYVKNRRPDEAFQ 236
Query: 370 LFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMYS 191
LF+ M D ++PNE+T+VNLL A T++GSL +G +HD GTALIDMYS
Sbjct: 237 LFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYS 296
Query: 190 KCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPDA 11
KCGSL+DARKVFD M +SL TWNSMITSLGVHG G EAL LF ME+ AS ++PDA
Sbjct: 297 KCGSLQDARKVFDVMQSKSLATWNSMITSLGVHGCGEEALCLFDDMEEEAS----VEPDA 352
Query: 10 VTF 2
+TF
Sbjct: 353 ITF 355
>ref|XP_010502600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like [Camelina sativa]
Length = 447
Score = 310 bits (793), Expect = 2e-81
Identities = 182/365 (49%), Positives = 231/365 (63%), Gaps = 2/365 (0%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F S EA + +R C+SF QLKQIH +V+++ L +N+Q S S+ F
Sbjct: 12 FRSLEASYSLRTCSSFSQLKQIHTRVIKHNL---TNDQLLVRQLI---------SVSSSF 59
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPH-DH 734
T YA F WNL+IRS ++++ ALLL+ LM+ H D
Sbjct: 60 GETQYASLVFNQLQSPST--FTWNLMIRSLSLNHK----PREALLLFILMLTHHHSHFDK 113
Query: 733 FTFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFD 554
FT PFVI+AC L SS + LG +HG ++ GF++D+F QNTLMD+YFK G G VFD
Sbjct: 114 FTLPFVIKAC-LASSYIHLGTQVHGLAIKAGFFSDVFFQNTLMDLYFKCGKPDCGRKVFD 172
Query: 553 KMSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAF 374
KM R++VSWTT+L GLVS + +A VF+ MP RNVVSWTAMI Y +N +P EAF
Sbjct: 173 KMPG--RSIVSWTTVLYGLVSNSQLDSAEIVFNQMPRRNVVSWTAMITAYVKNRRPDEAF 230
Query: 373 RLFQCM-VDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDM 197
+LF+ M VDD ++PNEYT+VNLL A T++GSL +G +HD GTALIDM
Sbjct: 231 QLFRRMQVDDRVKPNEYTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVVDSFLGTALIDM 290
Query: 196 YSKCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQP 17
YSKCGSL+DARKVFD M +SL TWNSMITSLGVHG G EALSLF ME+ AS ++P
Sbjct: 291 YSKCGSLQDARKVFDVMQSKSLATWNSMITSLGVHGCGEEALSLFQDMEEEAS----VEP 346
Query: 16 DAVTF 2
DA+TF
Sbjct: 347 DAITF 351
>ref|XP_013644722.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like [Brassica napus]
Length = 451
Score = 308 bits (790), Expect = 5e-81
Identities = 181/363 (49%), Positives = 227/363 (62%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F +A F +R C++F QLKQIHA+++R+ L +N+Q S+ F
Sbjct: 18 FRPEKAYFFLRTCSNFPQLKQIHAKIIRHNL---ANDQLLARHLITL---------SSSF 65
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHF 731
T YA F WNL+IRS +V+ ALLL+ LM+ S D F
Sbjct: 66 GETRYASLVFRQLHSPST--FTWNLMIRSLSVNNK----PREALLLFVLMLSHS-NLDKF 118
Query: 730 TFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDK 551
TFPFVI+AC L SSSL LG +HG ++ TGF+TD+F+QNTLMD+YFK G G VFD+
Sbjct: 119 TFPFVIKAC-LASSSLRLGTQVHGLAIKTGFFTDVFLQNTLMDLYFKCGKVDCGRKVFDE 177
Query: 550 MSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFR 371
M R +VSWTTML GLVS E + +A VF MP RNVVSWTAMI Y +N +P EAF+
Sbjct: 178 MPG--RNIVSWTTMLYGLVSNERLDDAEIVFRQMPTRNVVSWTAMIAAYVKNRRPDEAFQ 235
Query: 370 LFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMYS 191
LF+ M D + PNE+TLV++L A T++GSL +G +HD GTALIDMYS
Sbjct: 236 LFRRMQVDDVEPNEFTLVSMLQASTQLGSLSMGRWVHDYAHKNGFSLDCFLGTALIDMYS 295
Query: 190 KCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPDA 11
KCGSLEDAR+VFD M RSL TWNSMITSLGVHG G EALSLF ME + ++PDA
Sbjct: 296 KCGSLEDARRVFDVMESRSLATWNSMITSLGVHGLGDEALSLFGEMEG----EEGVEPDA 351
Query: 10 VTF 2
++F
Sbjct: 352 ISF 354
>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 480
Score = 308 bits (789), Expect = 6e-81
Identities = 184/383 (48%), Positives = 241/383 (62%)
Frame = -1
Query: 1150 TNYYSNNSPFLHLXXXXXXRFDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXX 971
T+ +SNN P +F S+EAL L+++ ++F +K + A+++RN L ++
Sbjct: 20 THNHSNNKP----------KFGSQEALNLLQKGSNFTHVKLVQAKIIRNNL----SDDQL 65
Query: 970 XXXXXXXLCPSTTSSPSNHFNNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSA 791
LC S + DYA F WN +IR++ +Y+G ++
Sbjct: 66 LVRKLLRLCFS--------YQKVDYATLIFDQIQNPHT--FTWNFMIRAY--NYNG--NS 111
Query: 790 HRALLLYSLMIQRSIPHDHFTFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNT 611
+ALLLY+LMI D FTFPFVI+AC L S+L GK +HG ++ TGF+ D F+ NT
Sbjct: 112 QQALLLYNLMICEGFSPDKFTFPFVIKAC-LDHSALDKGKEVHGFAIKTGFWKDTFLSNT 170
Query: 610 LMDMYFKYGDSVSGSMVFDKMSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVV 431
LMD+YFK GD +FDKM A R+VVSWTT + GLV+ + ARA FD MP RNVV
Sbjct: 171 LMDLYFKCGDLDYARKLFDKM--AVRSVVSWTTFVAGLVACGELDTARAAFDEMPMRNVV 228
Query: 430 SWTAMIGGYARNGQPQEAFRLFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXX 251
SWTAMI GY +N +PQEAF LFQ M ++RPN +TLV LL ACTE+GSL+LG IH+
Sbjct: 229 SWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACTELGSLELGRRIHEYA 288
Query: 250 XXXXXXXXXXXGTALIDMYSKCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEAL 71
GTALIDMYSKCGS+EDA+KVF+EM +SL TWNSMITSLGVHG G EAL
Sbjct: 289 LENGFKVGVFLGTALIDMYSKCGSIEDAKKVFEEMQKKSLATWNSMITSLGVHGFGKEAL 348
Query: 70 SLFSTMEKAASLDNNIQPDAVTF 2
+LF+ ME+A N++PDA+TF
Sbjct: 349 ALFAQMEEA-----NVRPDAITF 366
>ref|XP_009152041.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic [Brassica rapa]
Length = 451
Score = 306 bits (783), Expect = 3e-80
Identities = 180/363 (49%), Positives = 227/363 (62%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F +A F +R C++F QLKQIHA+++R+ L +N+Q S+ F
Sbjct: 18 FRPEKAYFFLRTCSNFPQLKQIHAKIIRHNL---ANDQLLARHLITL---------SSSF 65
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHF 731
T YA F WNL+IRS +V+ ALLL+ LM+ S D F
Sbjct: 66 GETRYASLVFRQLHSPST--FTWNLMIRSLSVNNK----PREALLLFVLMLSHS-NLDKF 118
Query: 730 TFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDK 551
TFPFVI+AC L SSSL LG +HG ++ TGF+TD+F+QNTLMD+YFK G G VFD+
Sbjct: 119 TFPFVIKAC-LASSSLRLGTQVHGLALKTGFFTDVFLQNTLMDLYFKCGKVDCGRKVFDE 177
Query: 550 MSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFR 371
M R +VSWTTML GLVS E + +A VF MP RNVVSWTAMI Y +N +P EAF+
Sbjct: 178 MPG--RNIVSWTTMLNGLVSNERLDDAEVVFRQMPARNVVSWTAMIAAYVKNRRPDEAFQ 235
Query: 370 LFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMYS 191
LF+ M D + PNE+TLV++L A T++GSL +G +HD GTALIDMYS
Sbjct: 236 LFRRMQVDDVEPNEFTLVSMLQASTQLGSLSMGRWVHDYAHKNGFSLDCFLGTALIDMYS 295
Query: 190 KCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPDA 11
KCGSLEDAR+VFD M +SL TWNSMITSLGVHG G EALSLF ME + ++PDA
Sbjct: 296 KCGSLEDARRVFDVMESKSLATWNSMITSLGVHGLGDEALSLFGEMEG----EEGVEPDA 351
Query: 10 VTF 2
++F
Sbjct: 352 ISF 354
>ref|XP_011651588.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic [Cucumis sativus]
Length = 425
Score = 304 bits (778), Expect = 1e-79
Identities = 181/395 (45%), Positives = 239/395 (60%)
Frame = -1
Query: 1186 MVEYLSYPPDAVTNYYSNNSPFLHLXXXXXXRFDSREALFLIRECNSFKQLKQIHAQVLR 1007
MV LSY D + S N P +++ALFL++ C +FK L+QIHA+++R
Sbjct: 1 MVPCLSYTHDV---FPSKNIPLT-----PRGNIRAKKALFLLQNCKNFKHLRQIHAKIIR 52
Query: 1006 NGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHFNNTDYAXXXXXXXXXXXXXTFNWNLVIR 827
+GL SN+Q T + + A TF WNL+IR
Sbjct: 53 SGL---SNDQLL-----------TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 826 SHTVDYSGPVSAHRALLLYSLMIQRSIPHDHFTFPFVIRACTLLSSSLPLGKALHGRSVV 647
++T++ + +AL+LY M+ + I D FTFPFVI+ACT S + LGK +HG +
Sbjct: 99 ANTINGL----SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLS-IDLGKVVHGSLIK 153
Query: 646 TGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDKMSDAKRTVVSWTTMLVGLVSAEAIKNAR 467
GF D+FVQN L+D YFK G + VF+KM R VVSWTT++ GL+S ++ AR
Sbjct: 154 YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMR--VRNVVSWTTVISGLISCGDLQEAR 211
Query: 466 AVFDLMPDRNVVSWTAMIGGYARNGQPQEAFRLFQCMVDDSIRPNEYTLVNLLVACTEMG 287
+FD +P +NVVSWTAMI GY RN QP+EA LF+ M ++I PNEYT+V+L+ ACTEMG
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 286 SLKLGSSIHDXXXXXXXXXXXXXGTALIDMYSKCGSLEDARKVFDEMPWRSLGTWNSMIT 107
L LG IHD GTALIDMYSKCGS++DA +VF+ MP +SL TWNSMIT
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 106 SLGVHGKGYEALSLFSTMEKAASLDNNIQPDAVTF 2
SLGVHG G EAL+LFS ME+ N++PDA+TF
Sbjct: 332 SLGVHGLGQEALNLFSEMERV-----NVKPDAITF 361
>ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutrema salsugineum]
gi|557092177|gb|ESQ32824.1| hypothetical protein
EUTSA_v10004197mg [Eutrema salsugineum]
Length = 453
Score = 302 bits (774), Expect = 3e-79
Identities = 175/363 (48%), Positives = 225/363 (61%)
Frame = -1
Query: 1090 FDSREALFLIRECNSFKQLKQIHAQVLRNGLLHHSNNQXXXXXXXXXLCPSTTSSPSNHF 911
F S +A F +R C++F QLKQIHA+++R L +N+Q S S+
Sbjct: 18 FRSDKASFFLRNCSNFSQLKQIHAKIIRYNL---TNDQLLVRQLI---------SVSSSL 65
Query: 910 NNTDYAXXXXXXXXXXXXXTFNWNLVIRSHTVDYSGPVSAHRALLLYSLMIQRSIPHDHF 731
T YA F WNL+IRS +V+ ALLL+ LM+ D F
Sbjct: 66 GETRYASLVFSQLQSPST--FTWNLMIRSLSVNDK----PREALLLFILMLSHQSQLDKF 119
Query: 730 TFPFVIRACTLLSSSLPLGKALHGRSVVTGFYTDIFVQNTLMDMYFKYGDSVSGSMVFDK 551
TFPFVI+AC L SSSL LG +HG ++ +GF++D+F QNTLMD+Y K G G VFDK
Sbjct: 120 TFPFVIKAC-LASSSLRLGTQVHGLAIKSGFFSDVFFQNTLMDLYLKCGKPDCGRKVFDK 178
Query: 550 MSDAKRTVVSWTTMLVGLVSAEAIKNARAVFDLMPDRNVVSWTAMIGGYARNGQPQEAFR 371
M RT+VSWTTML GLVS + +A +F+ MP RNVVSWTAMI Y +N +P EAF+
Sbjct: 179 MPG--RTIVSWTTMLYGLVSNSQLDSAEIIFNQMPTRNVVSWTAMITAYVKNCRPDEAFQ 236
Query: 370 LFQCMVDDSIRPNEYTLVNLLVACTEMGSLKLGSSIHDXXXXXXXXXXXXXGTALIDMYS 191
LF+ M D ++PNE+T+V++L A T++GSL +G +HD GTALIDMYS
Sbjct: 237 LFRRMQVDEVKPNEFTIVSMLQASTQLGSLSMGRWVHDYAHKNGFPLDCFLGTALIDMYS 296
Query: 190 KCGSLEDARKVFDEMPWRSLGTWNSMITSLGVHGKGYEALSLFSTMEKAASLDNNIQPDA 11
KCGSL+DA KVFD M +SL TWNSMITSLGVHG G EAL L+ ME+A ++PDA
Sbjct: 297 KCGSLQDAWKVFDAMQSKSLATWNSMITSLGVHGCGEEALDLYDQMEEA-----GVEPDA 351
Query: 10 VTF 2
+TF
Sbjct: 352 ITF 354