BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00027570
         (596 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO66461.1| hypothetical protein CISIN_1g030833mg [Citrus sin...   189   7e-46
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   189   7e-46
ref|XP_008232385.1| PREDICTED: DNA-directed RNA polymerases II a...   189   1e-45
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun...   189   1e-45
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun...   189   1e-45
gb|KJB27153.1| hypothetical protein B456_004G280900 [Gossypium r...   188   2e-45
ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II a...   188   2e-45
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil...   188   2e-45
ref|XP_008232387.1| PREDICTED: DNA-directed RNA polymerases II a...   187   4e-45
ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III ...   187   5e-45
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a...   187   5e-45
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II a...   187   5e-45
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II a...   186   6e-45
ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II a...   186   8e-45
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a...   185   1e-44
ref|XP_012469213.1| PREDICTED: DNA-directed RNA polymerases II a...   185   2e-44
gb|KHG28798.1| dna-directed rna polymerases i, ii, and iii subun...   185   2e-44
ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II a...   184   3e-44
ref|XP_008338854.1| PREDICTED: DNA-directed RNA polymerases II a...   184   4e-44
ref|XP_008338853.1| PREDICTED: DNA-directed RNA polymerases II a...   184   4e-44

>gb|KDO66461.1| hypothetical protein CISIN_1g030833mg [Citrus sinensis]
           gi|641847583|gb|KDO66462.1| hypothetical protein
           CISIN_1g030833mg [Citrus sinensis]
          Length = 170

 Score =  189 bits (481), Expect = 7e-46
 Identities = 91/141 (64%), Positives = 113/141 (80%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +SDEEI RLFRIRRT+MQML DRGY VGDFEIN ++ +F+AKFG+ ++REDL I K+ RN
Sbjct: 3   LSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D+ D IYVFFP+  KV + TMK    RM+++ V++AI+V QQNLTP A+  I E S+KFH
Sbjct: 63  DSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAELLVNI  HVLVPE
Sbjct: 123 LEVFQEAELLVNIKEHVLVPE 143


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  189 bits (481), Expect = 7e-46
 Identities = 91/141 (64%), Positives = 113/141 (80%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +SDEEI RLFRIRRT+MQML DRGY VGDFEIN ++ +F+AKFG+ ++REDL I K+ RN
Sbjct: 3   LSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D+ D IYVFFP+  KV + TMK    RM+++ V++AI+V QQNLTP A+  I E S+KFH
Sbjct: 63  DSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAELLVNI  HVLVPE
Sbjct: 123 LEVFQEAELLVNIKEHVLVPE 143


>ref|XP_008232385.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Prunus mume]
          Length = 206

 Score =  189 bits (479), Expect = 1e-45
 Identities = 89/139 (64%), Positives = 112/139 (80%)
 Frame = +3

Query: 180 DEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRNDN 359
           +EEITRL+R+R+T+MQML DR YLVGDFEIN TR +F +K+G+ ++REDL I K+KR+D+
Sbjct: 5   EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDS 64

Query: 360 DDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFHME 539
            D IYVFFP  PKV + TMK    RM+++ V +A++V QQNLTP AK  I+E SSKFH+E
Sbjct: 65  SDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLE 124

Query: 540 VFQEAELLVNISRHVLVPE 596
           VFQEAELLVNI  HVLVPE
Sbjct: 125 VFQEAELLVNIKEHVLVPE 143


>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
           gi|462416214|gb|EMJ20951.1| hypothetical protein
           PRUPE_ppa024345mg [Prunus persica]
          Length = 206

 Score =  189 bits (479), Expect = 1e-45
 Identities = 88/141 (62%), Positives = 114/141 (80%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           + +EEITRL+R+RRT+MQML DR YLVGDFEIN TR +F AK+G+ ++REDL I K+KRN
Sbjct: 3   LPEEEITRLYRVRRTVMQMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKTKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D+ D +YVFFP  PKV + T+K    RM++D V +AI+V QQN+TP+A+  I+E SSKFH
Sbjct: 63  DSTDQLYVFFPEEPKVGVKTIKTYTNRMKSDNVARAILVTQQNMTPMARTCISEISSKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           MEVFQE EL+VN++ HVLVPE
Sbjct: 123 MEVFQEPELMVNVTEHVLVPE 143


>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
           gi|462414880|gb|EMJ19617.1| hypothetical protein
           PRUPE_ppa011542mg [Prunus persica]
          Length = 206

 Score =  189 bits (479), Expect = 1e-45
 Identities = 89/139 (64%), Positives = 112/139 (80%)
 Frame = +3

Query: 180 DEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRNDN 359
           +EEITRL+R+R+T+MQML DR YLVGDFEIN TR +F +K+G+ ++REDL I K+KR+D+
Sbjct: 5   EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDS 64

Query: 360 DDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFHME 539
            D IYVFFP  PKV + TMK    RM+++ V +A++V QQNLTP AK  I+E SSKFH+E
Sbjct: 65  SDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLE 124

Query: 540 VFQEAELLVNISRHVLVPE 596
           VFQEAELLVNI  HVLVPE
Sbjct: 125 VFQEAELLVNIKEHVLVPE 143


>gb|KJB27153.1| hypothetical protein B456_004G280900 [Gossypium raimondii]
          Length = 201

 Score =  188 bits (478), Expect = 2e-45
 Identities = 88/141 (62%), Positives = 112/141 (79%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +SD+EI RLFRIR+T+MQML DRGY VGDFEIN ++ +F++K+G+ ++REDL I K+KRN
Sbjct: 3   LSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEINLSKQQFISKYGENMKREDLVINKTKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           DN D IYVFFP   KV + TMK    RM+++ V++AI+V QQNLTP A+  I E SSKFH
Sbjct: 63  DNSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAELLVN+  H LVPE
Sbjct: 123 LEVFQEAELLVNVKEHALVPE 143


>ref|XP_012477196.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Gossypium raimondii] gi|823154631|ref|XP_012477197.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Gossypium raimondii]
           gi|728836967|gb|KHG16410.1| dna-directed rna polymerases
           i, ii, and iii subunit rpabc1 [Gossypium arboreum]
           gi|763759819|gb|KJB27150.1| hypothetical protein
           B456_004G280900 [Gossypium raimondii]
           gi|763759820|gb|KJB27151.1| hypothetical protein
           B456_004G280900 [Gossypium raimondii]
           gi|763759821|gb|KJB27152.1| hypothetical protein
           B456_004G280900 [Gossypium raimondii]
          Length = 206

 Score =  188 bits (478), Expect = 2e-45
 Identities = 88/141 (62%), Positives = 112/141 (79%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +SD+EI RLFRIR+T+MQML DRGY VGDFEIN ++ +F++K+G+ ++REDL I K+KRN
Sbjct: 3   LSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEINLSKQQFISKYGENMKREDLVINKTKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           DN D IYVFFP   KV + TMK    RM+++ V++AI+V QQNLTP A+  I E SSKFH
Sbjct: 63  DNSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAELLVN+  H LVPE
Sbjct: 123 LEVFQEAELLVNVKEHALVPE 143


>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score =  188 bits (477), Expect = 2e-45
 Identities = 87/141 (61%), Positives = 113/141 (80%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +SD+EI RLFRIR+T+MQML DRGY VGDFEI  T+A+F++K+G+ ++REDL I K+KRN
Sbjct: 3   LSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           DN D IYVFFP+  KV + TMK    RM+++ V++A++V QQNLTP A+  I E SSKFH
Sbjct: 63  DNSDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQE+ELLVN+  H LVPE
Sbjct: 123 LEVFQESELLVNVKEHSLVPE 143


>ref|XP_008232387.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Prunus mume]
          Length = 206

 Score =  187 bits (475), Expect = 4e-45
 Identities = 87/141 (61%), Positives = 114/141 (80%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           + +EEITRL+R+RRT+MQML DR YLVGDFEIN TR +F AK+G+ ++REDL I K+KRN
Sbjct: 3   LPEEEITRLYRVRRTVMQMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKTKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D+ D +YVFFP  PKV + T+K    RM+++ V +AI+V QQN+TP+A+  I+E SSKFH
Sbjct: 63  DSTDQLYVFFPEEPKVGVKTIKTYTNRMKSENVSRAILVTQQNMTPMARTCISEISSKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           MEVFQE EL+VN++ HVLVPE
Sbjct: 123 MEVFQEPELMVNVTEHVLVPE 143


>ref|XP_010107375.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis] gi|587928674|gb|EXC15864.1| DNA-directed RNA
           polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  187 bits (474), Expect = 5e-45
 Identities = 89/141 (63%), Positives = 113/141 (80%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +S++EITRLFRIRRT+MQML DR YLVGDFE+N T+ +F  K+G+ ++REDL I KS+RN
Sbjct: 3   LSEDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D+ D IYVFFP   KV + TMK  I RM+++ V +A++V QQNLTP A+  I+E S+KFH
Sbjct: 63  DSPDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAELLVNI  HVLVPE
Sbjct: 123 LEVFQEAELLVNIKEHVLVPE 143


>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  187 bits (474), Expect = 5e-45
 Identities = 83/141 (58%), Positives = 119/141 (84%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +S+EE++RLFR+R+T+M+ML+DRGYLVGDFEIN ++ +FL K+G+ ++REDL ++K+KRN
Sbjct: 3   LSEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           ++ D IYVFFP  PKV + TMK   +RM+ ++V++AI++ QQNLTP A+  I+E S+KFH
Sbjct: 63  NSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAE+LVNI  HVL+PE
Sbjct: 123 LEVFQEAEMLVNIKNHVLIPE 143


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Vitis
           vinifera] gi|225445172|ref|XP_002284110.1| PREDICTED:
           DNA-directed RNA polymerases II and IV subunit 5A [Vitis
           vinifera]
          Length = 206

 Score =  187 bits (474), Expect = 5e-45
 Identities = 89/140 (63%), Positives = 112/140 (80%)
 Frame = +3

Query: 177 SDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRND 356
           S+EEI+RLFRIR+T+MQML DRGY VGDFEIN T+ +F++KFG+ ++REDL I K+KR D
Sbjct: 4   SEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTD 63

Query: 357 NDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFHM 536
           + D IYVFFP   KV + TMK    RM+++ V++AI+V QQNLTP A+  I E S+KFH+
Sbjct: 64  SSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHL 123

Query: 537 EVFQEAELLVNISRHVLVPE 596
           EVFQEAELLVNI  HVLVPE
Sbjct: 124 EVFQEAELLVNIKEHVLVPE 143


>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Solanum lycopersicum]
          Length = 206

 Score =  186 bits (473), Expect = 6e-45
 Identities = 83/141 (58%), Positives = 119/141 (84%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +S+EE+++LFR+R+T+M+ML+DRGYLVGDFEIN ++ +FL K+G+ ++REDL I+K+KRN
Sbjct: 3   LSEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           ++ D IYVFFP  PKV + TMK   +RM+ ++V++AI++ QQNLTP A+  I+E S+KFH
Sbjct: 63  NSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAE+LVNI  HVL+PE
Sbjct: 123 LEVFQEAEMLVNIKNHVLIPE 143


>ref|XP_010274103.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Nelumbo nucifera] gi|720057870|ref|XP_010274104.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A [Nelumbo nucifera]
          Length = 206

 Score =  186 bits (472), Expect = 8e-45
 Identities = 88/140 (62%), Positives = 114/140 (81%)
 Frame = +3

Query: 177 SDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRND 356
           S++EITRLFRIRRT++QML DRGYLVGDFE+N TR++F++K+G+ ++REDL I K+KRND
Sbjct: 4   SEDEITRLFRIRRTVIQMLKDRGYLVGDFELNMTRSQFVSKYGENVKREDLVINKAKRND 63

Query: 357 NDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFHM 536
           + D I+VFFP   KV + TMK    RM+++ V++AI+V QQNLT  AK  I E ++KFH+
Sbjct: 64  SSDQIFVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTAFAKTCINEIAAKFHL 123

Query: 537 EVFQEAELLVNISRHVLVPE 596
           EVFQEAELLVNI  HVLVPE
Sbjct: 124 EVFQEAELLVNIKEHVLVPE 143


>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  185 bits (470), Expect = 1e-44
 Identities = 83/141 (58%), Positives = 118/141 (83%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +S+EE++RLFR+R+T+M+ML+DRGYLVGDFEIN ++ EFL K+G+ ++REDL ++K+KRN
Sbjct: 3   LSEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           ++ D IYVFFP  PKV + TMK   +RM+ ++V++AI++ QQNLTP A+  I+E S KFH
Sbjct: 63  NSSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAE+LVNI  HVL+P+
Sbjct: 123 LEVFQEAEMLVNIKNHVLIPK 143


>ref|XP_012469213.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Gossypium raimondii] gi|763739700|gb|KJB07199.1|
           hypothetical protein B456_001G007200 [Gossypium
           raimondii]
          Length = 206

 Score =  185 bits (469), Expect = 2e-44
 Identities = 86/141 (60%), Positives = 111/141 (78%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +SD+EI RLFRIR+T++Q+L DR Y VGDFEIN +R +F++KFG+ ++REDL I K+KRN
Sbjct: 3   LSDDEIRRLFRIRKTVLQLLKDRDYFVGDFEINMSREQFISKFGENMKREDLVINKAKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D+ D IYVFFP  PKV + TMK    RM+++ V++AI+V QQNLTP A+  I E SSKFH
Sbjct: 63  DSSDQIYVFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQE ELLVN+  H LVPE
Sbjct: 123 LEVFQETELLVNVKEHSLVPE 143


>gb|KHG28798.1| dna-directed rna polymerases i, ii, and iii subunit rpabc1
           [Gossypium arboreum]
          Length = 206

 Score =  185 bits (469), Expect = 2e-44
 Identities = 86/141 (60%), Positives = 111/141 (78%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +SD+EI RLFRIR+T++Q+L DR Y VGDFEIN +R +F++KFG+ ++REDL I K+KRN
Sbjct: 3   LSDDEIRRLFRIRKTVLQLLKDRDYFVGDFEINMSREQFISKFGENMKREDLIINKAKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D+ D IYVFFP  PKV + TMK    RM+++ V++AI+V QQNLTP A+  I E SSKFH
Sbjct: 63  DSSDQIYVFFPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISSKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQE ELLVN+  H LVPE
Sbjct: 123 LEVFQETELLVNVKEHSLVPE 143


>ref|XP_011014255.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           [Populus euphratica]
          Length = 206

 Score =  184 bits (467), Expect = 3e-44
 Identities = 88/141 (62%), Positives = 111/141 (78%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +++EEI RLFRIR+T+MQML DRGY VGDFEI  TR +F +K+G+ ++REDL I K+KRN
Sbjct: 3   LTEEEIKRLFRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRN 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D+ D IYVFFP   KV + TMK    RM+++ V++AI+V QQNLTP A+  I E S+KFH
Sbjct: 63  DSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAELLVNI  HVLVPE
Sbjct: 123 LEVFQEAELLVNIKEHVLVPE 143


>ref|XP_008338854.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           isoform X2 [Malus domestica]
          Length = 201

 Score =  184 bits (466), Expect = 4e-44
 Identities = 86/141 (60%), Positives = 113/141 (80%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +++EEITRL+R+R+T+MQML DR YLVGDFEIN ++ +F  K+G+ ++REDL I K+KR 
Sbjct: 3   LTEEEITRLYRVRKTVMQMLKDRNYLVGDFEINMSKEQFKDKYGENMKREDLIINKTKRT 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D +D IYVFFP+ PKV + TMK    RM+++ V++AI+V QQ+LTP AK  I+E S KFH
Sbjct: 63  DTNDQIYVFFPDEPKVGVKTMKTYTNRMKSENVFRAILVTQQSLTPFAKTCISEISGKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAELLVNI  HVLVPE
Sbjct: 123 LEVFQEAELLVNIKEHVLVPE 143


>ref|XP_008338853.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           isoform X1 [Malus domestica]
          Length = 206

 Score =  184 bits (466), Expect = 4e-44
 Identities = 86/141 (60%), Positives = 113/141 (80%)
 Frame = +3

Query: 174 MSDEEITRLFRIRRTIMQMLNDRGYLVGDFEINETRAEFLAKFGDKLRREDLDIKKSKRN 353
           +++EEITRL+R+R+T+MQML DR YLVGDFEIN ++ +F  K+G+ ++REDL I K+KR 
Sbjct: 3   LTEEEITRLYRVRKTVMQMLKDRNYLVGDFEINMSKEQFKDKYGENMKREDLIINKTKRT 62

Query: 354 DNDDHIYVFFPNNPKVNIDTMKICIKRMQNDEVYKAIVVAQQNLTPVAKKFITEFSSKFH 533
           D +D IYVFFP+ PKV + TMK    RM+++ V++AI+V QQ+LTP AK  I+E S KFH
Sbjct: 63  DTNDQIYVFFPDEPKVGVKTMKTYTNRMKSENVFRAILVTQQSLTPFAKTCISEISGKFH 122

Query: 534 MEVFQEAELLVNISRHVLVPE 596
           +EVFQEAELLVNI  HVLVPE
Sbjct: 123 LEVFQEAELLVNIKEHVLVPE 143