BLASTX nr result
ID: Papaver30_contig00027485
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00027485
(960 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF,... 184 7e-44
ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF,... 183 2e-43
ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF,... 169 3e-39
emb|CBI32760.3| unnamed protein product [Vitis vinifera] 169 4e-39
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr... 165 6e-38
ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF,... 164 7e-38
ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,... 164 1e-37
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr... 163 2e-37
ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF,... 162 5e-37
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,... 162 5e-37
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr... 162 5e-37
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,... 161 8e-37
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [... 159 4e-36
gb|KDO48074.1| hypothetical protein CISIN_1g008352mg [Citrus sin... 157 9e-36
ref|XP_012485938.1| PREDICTED: RNA polymerase sigma factor sigF,... 156 2e-35
gb|KJB36543.1| hypothetical protein B456_006G165200 [Gossypium r... 156 3e-35
ref|XP_012485937.1| PREDICTED: RNA polymerase sigma factor sigF,... 156 3e-35
gb|KDO48081.1| hypothetical protein CISIN_1g008352mg [Citrus sin... 155 3e-35
gb|KDO48080.1| hypothetical protein CISIN_1g008352mg [Citrus sin... 155 3e-35
gb|KDO48079.1| hypothetical protein CISIN_1g008352mg [Citrus sin... 155 3e-35
>ref|XP_010241844.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X2 [Nelumbo nucifera]
Length = 565
Score = 184 bits (468), Expect = 7e-44
Identities = 126/280 (45%), Positives = 165/280 (58%), Gaps = 9/280 (3%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNAHPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQ 639
ME GRNL+SS P + QL+N+ SV +LHE TRHFPASVL QEQ
Sbjct: 1 MEVGRNLVSSASLFPPRTQLKNSSS-SVTLLHEQANPIVVSMPTTSITRHFPASVLLQEQ 59
Query: 638 RDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPG 462
RDD+R L + RE+K + LDR ++++ L +EK+ S D+Y + FERQLLY PG
Sbjct: 60 RDDIRPFLQIIREDKTSQAMLDRRKLEDKVHLYEEKK---SCQPDRYWEGFERQLLYWPG 116
Query: 461 LWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSL----- 300
LWYL P + E S+ QS ++ + + V+ CD L LAK+AVL SKQA+SL
Sbjct: 117 LWYLLPSLYKGEKPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAKDYE 176
Query: 299 IVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEISSL 120
+ ++SH +L P N I P +E VRS RLLERQSK+R P+ ++ E S+
Sbjct: 177 LFGADSHESFLPDLEPRNLANKI-PLREEVAVRSKRLLERQSKRRWIPRPKVVVSEASTS 235
Query: 119 RTTDKHHKT-SLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
R +D H K D +DPLRLFL G E +QLLT KEE EL
Sbjct: 236 RKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESEL 275
>ref|XP_010241843.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X1 [Nelumbo nucifera]
Length = 568
Score = 183 bits (464), Expect = 2e-43
Identities = 125/282 (44%), Positives = 165/282 (58%), Gaps = 11/282 (3%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNAHP--LSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-Q 645
ME GRNL+SS P + QL+N+ + V +LHE TRHFPASVL Q
Sbjct: 1 MEVGRNLVSSASLFPPRTQLKNSSSSGMPVTLLHEQANPIVVSMPTTSITRHFPASVLLQ 60
Query: 644 EQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYS 468
EQRDD+R L + RE+K + LDR ++++ L +EK+ S D+Y + FERQLLY
Sbjct: 61 EQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVHLYEEKK---SCQPDRYWEGFERQLLYW 117
Query: 467 PGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSL--- 300
PGLWYL P + E S+ QS ++ + + V+ CD L LAK+AVL SKQA+SL
Sbjct: 118 PGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLASKQAASLAKD 177
Query: 299 --IVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEIS 126
+ ++SH +L P N I P +E VRS RLLERQSK+R P+ ++ E S
Sbjct: 178 YELFGADSHESFLPDLEPRNLANKI-PLREEVAVRSKRLLERQSKRRWIPRPKVVVSEAS 236
Query: 125 SLRTTDKHHKT-SLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ R +D H K D +DPLRLFL G E +QLLT KEE EL
Sbjct: 237 TSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESEL 278
>ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Vitis
vinifera]
Length = 567
Score = 169 bits (428), Expect = 3e-39
Identities = 122/280 (43%), Positives = 164/280 (58%), Gaps = 8/280 (2%)
Frame = -2
Query: 818 TMEAGRNLLSSPPFIPSKHQLRNAHPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QE 642
+MEAG N+LSS P P + RN+ SV +LH+ R FP SVL QE
Sbjct: 6 SMEAGTNILSSTPSFPPRTHFRNSSS-SVLMLHDQVAPAVASIPTTIA-RKFPTSVLLQE 63
Query: 641 QRDDLRSLLH-LREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSP 465
QRD+ R L++E+ ++ L++ Q++ S ++E S+ ++Y+ +FERQLL P
Sbjct: 64 QRDEYRPFPQALKDERTFQATLEKRQMEIVVSADEEN----SDDHNQYMVNFERQLLLQP 119
Query: 464 GLWYLSPPSQRENKA--SSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVA 291
GLWY P SQ K+ SS M+S+++D + + VK CD+LALAK+A+ SKQA SL
Sbjct: 120 GLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSLY-- 177
Query: 290 SNSHLHNAN-ELIPSFGMNDISPPE---KEKIVRSTRLLERQSKKRRAPKSALLGDEISS 123
N+ L A+ E PS + IS P +EK VRSTRLLER+SKKRR PK A + + S
Sbjct: 178 ENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNPKVA-VHENHGS 236
Query: 122 LRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
R + D DPLRLFL G E R+LLTAKEE EL
Sbjct: 237 RRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESEL 276
>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 169 bits (427), Expect = 4e-39
Identities = 122/279 (43%), Positives = 163/279 (58%), Gaps = 8/279 (2%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNAHPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQ 639
MEAG N+LSS P P + RN+ SV +LH+ R FP SVL QEQ
Sbjct: 1 MEAGTNILSSTPSFPPRTHFRNSSS-SVLMLHDQVAPAVASIPTTIA-RKFPTSVLLQEQ 58
Query: 638 RDDLRSLLH-LREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPG 462
RD+ R L++E+ ++ L++ Q++ S ++E S+ ++Y+ +FERQLL PG
Sbjct: 59 RDEYRPFPQALKDERTFQATLEKRQMEIVVSADEEN----SDDHNQYMVNFERQLLLQPG 114
Query: 461 LWYLSPPSQRENKA--SSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVAS 288
LWY P SQ K+ SS M+S+++D + + VK CD+LALAK+A+ SKQA SL
Sbjct: 115 LWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSLY--E 172
Query: 287 NSHLHNAN-ELIPSFGMNDISPPE---KEKIVRSTRLLERQSKKRRAPKSALLGDEISSL 120
N+ L A+ E PS + IS P +EK VRSTRLLER+SKKRR PK A + + S
Sbjct: 173 NAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKRRNPKVA-VHENHGSR 231
Query: 119 RTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
R + D DPLRLFL G E R+LLTAKEE EL
Sbjct: 232 RAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESEL 270
>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530789|gb|ESR41972.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 561
Score = 165 bits (417), Expect = 6e-38
Identities = 113/275 (41%), Positives = 156/275 (56%), Gaps = 4/275 (1%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNAHPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQ 639
MEAGRNLLSSPP PS+ +++++ S + RHFP SVL QEQ
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60
Query: 638 RDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPG 462
RD+ R LLH+ +E+K + D ++ + +EK S D+ ++D E Q L+ P
Sbjct: 61 RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLVQDLEHQFLHWPD 117
Query: 461 LWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASN 285
LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+A+SL A N
Sbjct: 118 LWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL--AEN 175
Query: 284 SHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDK 105
L+ A S + P E+ K VRSTR LER+SKKR+ K + E + R
Sbjct: 176 PKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYNSRKASV 235
Query: 104 HHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 236 KKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFEL 270
>ref|XP_010241845.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X3 [Nelumbo nucifera]
Length = 540
Score = 164 bits (416), Expect = 7e-38
Identities = 113/253 (44%), Positives = 148/253 (58%), Gaps = 9/253 (3%)
Frame = -2
Query: 734 VAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQID 561
V +LHE TRHFPASVL QEQRDD+R L + RE+K + LDR +++
Sbjct: 2 VTLLHEQANPIVVSMPTTSITRHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLE 61
Query: 560 NDTSLNQEKRERGSEASDKYLKDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDA 384
+ L +EK+ S D+Y + FERQLLY PGLWYL P + E S+ QS ++
Sbjct: 62 DKVHLYEEKK---SCQPDRYWEGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGT 118
Query: 383 DEELHVKACDLLALAKQAVLVSKQASSL-----IVASNSHLHNANELIPSFGMNDISPPE 219
+ + V+ CD L LAK+AVL SKQA+SL + ++SH +L P N I P
Sbjct: 119 VKNVDVRPCDALELAKKAVLASKQAASLAKDYELFGADSHESFLPDLEPRNLANKI-PLR 177
Query: 218 KEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDKHHKT-SLIDLSDPLRLFLSGAE 42
+E VRS RLLERQSK+R P+ ++ E S+ R +D H K D +DPLRLFL G E
Sbjct: 178 EEVAVRSKRLLERQSKRRWIPRPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPE 237
Query: 41 ARQLLTAKEEKEL 3
+QLLT KEE EL
Sbjct: 238 TKQLLTPKEESEL 250
>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 561
Score = 164 bits (414), Expect = 1e-37
Identities = 112/275 (40%), Positives = 156/275 (56%), Gaps = 4/275 (1%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNAHPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQ 639
MEAGRNLLSSPP PS+ +++++ S + RHFP SVL QEQ
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60
Query: 638 RDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPG 462
RD+ R LLH+ +E+K + D ++ + +EK S D+ ++D E Q L+ P
Sbjct: 61 RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLVQDLEHQFLHWPD 117
Query: 461 LWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASN 285
LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+A+SL A N
Sbjct: 118 LWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL--AEN 175
Query: 284 SHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDK 105
L+ A S + P E+ K VRST+ LER+SKKR+ K + E + R
Sbjct: 176 PKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYNSRKASV 235
Query: 104 HHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 236 KKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 270
>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530788|gb|ESR41971.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 569
Score = 163 bits (412), Expect = 2e-37
Identities = 118/283 (41%), Positives = 158/283 (55%), Gaps = 12/283 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPS----KHQLRNA----HPLSVAVLHEXXXXXXXXXXXXXXTRHFP 660
MEAGRNLLSSPP PS KH L ++ SV + +E RHFP
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60
Query: 659 ASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFE 486
SVL QEQRD+ R LLH+ +E+K + D ++ + +EK S D+ ++D E
Sbjct: 61 TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLVQDLE 117
Query: 485 RQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQA 309
Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+A
Sbjct: 118 HQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEA 177
Query: 308 SSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEI 129
+SL A N L+ A S + P E+ K VRSTR LER+SKKR+ K + E
Sbjct: 178 ASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHET 235
Query: 128 SSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 236 YNSRKASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFEL 278
>ref|XP_010241846.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
X4 [Nelumbo nucifera]
Length = 525
Score = 162 bits (409), Expect = 5e-37
Identities = 108/232 (46%), Positives = 142/232 (61%), Gaps = 9/232 (3%)
Frame = -2
Query: 671 RHFPASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYL 498
RHFPASVL QEQRDD+R L + RE+K + LDR ++++ L +EK+ S D+Y
Sbjct: 8 RHFPASVLLQEQRDDIRPFLQIIREDKTSQAMLDRRKLEDKVHLYEEKK---SCQPDRYW 64
Query: 497 KDFERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLV 321
+ FERQLLY PGLWYL P + E S+ QS ++ + + V+ CD L LAK+AVL
Sbjct: 65 EGFERQLLYWPGLWYLLPSLYKGEKPLLSMVTQSTAAGTVKNVDVRPCDALELAKKAVLA 124
Query: 320 SKQASSL-----IVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAP 156
SKQA+SL + ++SH +L P N I P +E VRS RLLERQSK+R P
Sbjct: 125 SKQAASLAKDYELFGADSHESFLPDLEPRNLANKI-PLREEVAVRSKRLLERQSKRRWIP 183
Query: 155 KSALLGDEISSLRTTDKHHKT-SLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ ++ E S+ R +D H K D +DPLRLFL G E +QLLT KEE EL
Sbjct: 184 RPKVVVSEASTSRKSDIHKKIHEGFDTNDPLRLFLWGPETKQLLTPKEESEL 235
>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 569
Score = 162 bits (409), Expect = 5e-37
Identities = 117/283 (41%), Positives = 158/283 (55%), Gaps = 12/283 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPS----KHQLRNA----HPLSVAVLHEXXXXXXXXXXXXXXTRHFP 660
MEAGRNLLSSPP PS KH L ++ SV + +E RHFP
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60
Query: 659 ASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFE 486
SVL QEQRD+ R LLH+ +E+K + D ++ + +EK S D+ ++D E
Sbjct: 61 TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLVQDLE 117
Query: 485 RQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQA 309
Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+A
Sbjct: 118 HQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEA 177
Query: 308 SSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEI 129
+SL A N L+ A S + P E+ K VRST+ LER+SKKR+ K + E
Sbjct: 178 ASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHET 235
Query: 128 SSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 236 YNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 278
>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
gi|557530787|gb|ESR41970.1| hypothetical protein
CICLE_v10011376mg [Citrus clementina]
Length = 558
Score = 162 bits (409), Expect = 5e-37
Identities = 115/275 (41%), Positives = 156/275 (56%), Gaps = 4/275 (1%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNAHPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQ 639
MEAGRNLLSSPP PS+ +++ H LS + RHFP SVL QEQ
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVK--HSLSSSA-SSSSSSSVASVPTSSVARHFPTSVLLQEQ 57
Query: 638 RDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPG 462
RD+ R LLH+ +E+K + D ++ + +EK S D+ ++D E Q L+ P
Sbjct: 58 RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLVQDLEHQFLHWPD 114
Query: 461 LWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASN 285
LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+A+SL A N
Sbjct: 115 LWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL--AEN 172
Query: 284 SHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDK 105
L+ A S + P E+ K VRSTR LER+SKKR+ K + E + R
Sbjct: 173 PKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYNSRKASV 232
Query: 104 HHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 233 KKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFEL 267
>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 570
Score = 161 bits (407), Expect = 8e-37
Identities = 117/284 (41%), Positives = 158/284 (55%), Gaps = 13/284 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPS----KHQLRNAHPLS-----VAVLHEXXXXXXXXXXXXXXTRHF 663
MEAGRNLLSSPP PS KH L ++ S V + +E RHF
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAVLMHNEQSAPAVASVPTSSVARHF 60
Query: 662 PASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDF 489
P SVL QEQRD+ R LLH+ +E+K + D ++ + +EK S D+ ++D
Sbjct: 61 PTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKN---SGDLDQLVQDL 117
Query: 488 ERQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQ 312
E Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+
Sbjct: 118 EHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKE 177
Query: 311 ASSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDE 132
A+SL A N L+ A S + P E+ K VRST+ LER+SKKR+ K + E
Sbjct: 178 AASL--AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHE 235
Query: 131 ISSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 236 TYNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 279
>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
rpoD, putative [Theobroma cacao]
Length = 568
Score = 159 bits (401), Expect = 4e-36
Identities = 120/285 (42%), Positives = 163/285 (57%), Gaps = 14/285 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNA----HPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL 648
MEA RNLLS PP ++ QL+++ SV + HE RHFP SVL
Sbjct: 1 MEAARNLLSPPPTFSTRTQLKSSVFSTSSSSVLMFHEQAAPAATSIPITSVARHFPTSVL 60
Query: 647 -QEQRDDLRSL--LHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLK-DFER 483
QEQRDD R L LH +E+K Y A D+ QI+N SLN+E AS+ + + FE+
Sbjct: 61 LQEQRDDYRPLPVLHFFKEDKAYPGATDKQQIENGASLNEEN------ASNNFGQLGFEK 114
Query: 482 QLLYSPGLWYL-SPPSQRENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQAS 306
+LL P L L S EN +S+ +MQS+++D E + V+ +++ALAK+A+ SKQA+
Sbjct: 115 KLLQWPDLTQLLSLLESEENPSSTSNMQSVAADTKEIVDVEPSNIVALAKKALSASKQAA 174
Query: 305 SLIVASNSHLHNANELIPSFGMNDIS--PPEKEKIV--RSTRLLERQSKKRRAPKSALLG 138
SL + + L + L S G + P EKE++V RSTR LERQSK+RR +
Sbjct: 175 SL--SEDLKLDLDDSLSNSLGSANSCTLPVEKEEVVTVRSTRRLERQSKRRRVQPKVTIR 232
Query: 137 DEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ SS RT + + D +DPLRLFL G E +QLLTAKEE EL
Sbjct: 233 ETYSSRRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESEL 277
>gb|KDO48074.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
Length = 561
Score = 157 bits (398), Expect = 9e-36
Identities = 110/275 (40%), Positives = 152/275 (55%), Gaps = 4/275 (1%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNAHPLSVAVLHEXXXXXXXXXXXXXXTRHFPASVL-QEQ 639
MEAGRNLLSSPP PS+ +++++ S + RHFP SVL QEQ
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60
Query: 638 RDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFERQLLYSPG 462
RD+ R LLH+ +E+K + D I+ + +EK S D+ ++D E Q L+ P
Sbjct: 61 RDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKN---SGDLDQLVQDLEHQFLHWPD 117
Query: 461 LWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASSLIVASN 285
LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+A+SL A N
Sbjct: 118 LWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL--AEN 175
Query: 284 SHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEISSLRTTDK 105
L+ A S + P E+ K R LER+SKKR+ K + E + R
Sbjct: 176 PKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHETYNSRKASV 235
Query: 104 HHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 236 KKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 270
>ref|XP_012485938.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X2 [Gossypium raimondii]
Length = 562
Score = 156 bits (395), Expect = 2e-35
Identities = 116/284 (40%), Positives = 158/284 (55%), Gaps = 13/284 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNA----HPLSVAVLHEXXXXXXXXXXXXXXT-RHFPASV 651
MEA RN LS PP ++ QL+N+ SV++ HE RHFP SV
Sbjct: 1 MEAARNFLSLPPSFSTRTQLKNSVSSLPSSSVSMFHEQAAAAAATSIPIHSVARHFPTSV 60
Query: 650 L-QEQRDDLRSL---LHLREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFER 483
L QEQRDD R L + +E+K Y D+ Q++N T+L++ K +FE+
Sbjct: 61 LSQEQRDDCRPLPILQYFKEDKAYPGPTDKQQVENGTTLHEGKASN----------NFEQ 110
Query: 482 QLLYSPGLWYLSPPSQRENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQASS 303
Q+L P L LS EN +SSL+MQS+++D +E ++V+ +LALAK A+ SKQA
Sbjct: 111 QMLQWPDL-RLSVLELGENPSSSLNMQSVAADTEETMNVEPSTILALAKNALSASKQA-- 167
Query: 302 LIVASNSHLHNANELIPSFGMNDIS--PPEKEKI--VRSTRLLERQSKKRRAPKSALLGD 135
L +A + L + L S G + S P E+E+ VRSTR LERQSK+RR P ++ D
Sbjct: 168 LALAEDLKLDLDDSLSNSLGSANSSTLPVEEEEAPTVRSTRRLERQSKRRRMPSKFMISD 227
Query: 134 EISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
S +T + + D +DPLRLFL G E QLLTAKEE EL
Sbjct: 228 TYSLRKTNVRKKVSGSYDPNDPLRLFLRGPETTQLLTAKEESEL 271
>gb|KJB36543.1| hypothetical protein B456_006G165200 [Gossypium raimondii]
Length = 411
Score = 156 bits (394), Expect = 3e-35
Identities = 116/285 (40%), Positives = 158/285 (55%), Gaps = 14/285 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNA----HPLSVAVLHEXXXXXXXXXXXXXXT-RHFPASV 651
MEA RN LS PP ++ QL+N+ SV++ HE RHFP SV
Sbjct: 1 MEAARNFLSLPPSFSTRTQLKNSVSSLPSSSVSMFHEQAAAAAATSIPIHSVARHFPTSV 60
Query: 650 L-QEQRDDLRSL---LHLREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFER 483
L QEQRDD R L + +E+K Y D+ Q++N T+L++ K +FE+
Sbjct: 61 LSQEQRDDCRPLPILQYFKEDKAYPGPTDKQQVENGTTLHEGKASN----------NFEQ 110
Query: 482 QLLYSPGL-WYLSPPSQRENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQAS 306
Q+L P L LS EN +SSL+MQS+++D +E ++V+ +LALAK A+ SKQA
Sbjct: 111 QMLQWPDLRQLLSVLELGENPSSSLNMQSVAADTEETMNVEPSTILALAKNALSASKQA- 169
Query: 305 SLIVASNSHLHNANELIPSFGMNDIS--PPEKEKI--VRSTRLLERQSKKRRAPKSALLG 138
L +A + L + L S G + S P E+E+ VRSTR LERQSK+RR P ++
Sbjct: 170 -LALAEDLKLDLDDSLSNSLGSANSSTLPVEEEEAPTVRSTRRLERQSKRRRMPSKFMIS 228
Query: 137 DEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
D S +T + + D +DPLRLFL G E QLLTAKEE EL
Sbjct: 229 DTYSLRKTNVRKKVSGSYDPNDPLRLFLRGPETTQLLTAKEESEL 273
>ref|XP_012485937.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
isoform X1 [Gossypium raimondii]
gi|763769326|gb|KJB36541.1| hypothetical protein
B456_006G165200 [Gossypium raimondii]
Length = 564
Score = 156 bits (394), Expect = 3e-35
Identities = 116/285 (40%), Positives = 158/285 (55%), Gaps = 14/285 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPSKHQLRNA----HPLSVAVLHEXXXXXXXXXXXXXXT-RHFPASV 651
MEA RN LS PP ++ QL+N+ SV++ HE RHFP SV
Sbjct: 1 MEAARNFLSLPPSFSTRTQLKNSVSSLPSSSVSMFHEQAAAAAATSIPIHSVARHFPTSV 60
Query: 650 L-QEQRDDLRSL---LHLREEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFER 483
L QEQRDD R L + +E+K Y D+ Q++N T+L++ K +FE+
Sbjct: 61 LSQEQRDDCRPLPILQYFKEDKAYPGPTDKQQVENGTTLHEGKASN----------NFEQ 110
Query: 482 QLLYSPGL-WYLSPPSQRENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQAS 306
Q+L P L LS EN +SSL+MQS+++D +E ++V+ +LALAK A+ SKQA
Sbjct: 111 QMLQWPDLRQLLSVLELGENPSSSLNMQSVAADTEETMNVEPSTILALAKNALSASKQA- 169
Query: 305 SLIVASNSHLHNANELIPSFGMNDIS--PPEKEKI--VRSTRLLERQSKKRRAPKSALLG 138
L +A + L + L S G + S P E+E+ VRSTR LERQSK+RR P ++
Sbjct: 170 -LALAEDLKLDLDDSLSNSLGSANSSTLPVEEEEAPTVRSTRRLERQSKRRRMPSKFMIS 228
Query: 137 DEISSLRTTDKHHKTSLIDLSDPLRLFLSGAEARQLLTAKEEKEL 3
D S +T + + D +DPLRLFL G E QLLTAKEE EL
Sbjct: 229 DTYSLRKTNVRKKVSGSYDPNDPLRLFLRGPETTQLLTAKEESEL 273
>gb|KDO48081.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
Length = 378
Score = 155 bits (393), Expect = 3e-35
Identities = 115/283 (40%), Positives = 154/283 (54%), Gaps = 12/283 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPS----KHQLRNA----HPLSVAVLHEXXXXXXXXXXXXXXTRHFP 660
MEAGRNLLSSPP PS KH L ++ SV + +E RHFP
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60
Query: 659 ASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFE 486
SVL QEQRD+ R LLH+ +E+K + D I+ + +EK S D+ ++D E
Sbjct: 61 TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKN---SGDLDQLVQDLE 117
Query: 485 RQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQA 309
Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+A
Sbjct: 118 HQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEA 177
Query: 308 SSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEI 129
+SL A N L+ A S + P E+ K R LER+SKKR+ K + E
Sbjct: 178 ASL--AENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHET 235
Query: 128 SSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 236 YNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 278
>gb|KDO48080.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
Length = 361
Score = 155 bits (393), Expect = 3e-35
Identities = 115/283 (40%), Positives = 154/283 (54%), Gaps = 12/283 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPS----KHQLRNA----HPLSVAVLHEXXXXXXXXXXXXXXTRHFP 660
MEAGRNLLSSPP PS KH L ++ SV + +E RHFP
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60
Query: 659 ASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFE 486
SVL QEQRD+ R LLH+ +E+K + D I+ + +EK S D+ ++D E
Sbjct: 61 TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKN---SGDLDQLVQDLE 117
Query: 485 RQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQA 309
Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+A
Sbjct: 118 HQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEA 177
Query: 308 SSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEI 129
+SL A N L+ A S + P E+ K R LER+SKKR+ K + E
Sbjct: 178 ASL--AENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHET 235
Query: 128 SSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 236 YNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 278
>gb|KDO48079.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
Length = 428
Score = 155 bits (393), Expect = 3e-35
Identities = 115/283 (40%), Positives = 154/283 (54%), Gaps = 12/283 (4%)
Frame = -2
Query: 815 MEAGRNLLSSPPFIPS----KHQLRNA----HPLSVAVLHEXXXXXXXXXXXXXXTRHFP 660
MEAGRNLLSSPP PS KH L ++ SV + +E RHFP
Sbjct: 1 MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60
Query: 659 ASVL-QEQRDDLRSLLHL-REEKPYKTALDRTQIDNDTSLNQEKRERGSEASDKYLKDFE 486
SVL QEQRD+ R LLH+ +E+K + D I+ + +EK S D+ ++D E
Sbjct: 61 TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKN---SGDLDQLVQDLE 117
Query: 485 RQLLYSPGLWYLSPPSQR-ENKASSLDMQSMSSDADEELHVKACDLLALAKQAVLVSKQA 309
Q L+ P LW LSPP +R E+ + SL MQS+S+D +E + + D +ALA++A+ SK+A
Sbjct: 118 HQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEA 177
Query: 308 SSLIVASNSHLHNANELIPSFGMNDISPPEKEKIVRSTRLLERQSKKRRAPKSALLGDEI 129
+SL A N L+ A S + P E+ K R LER+SKKR+ K + E
Sbjct: 178 ASL--AENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHET 235
Query: 128 SSLRTTDKHHKTSL-IDLSDPLRLFLSGAEARQLLTAKEEKEL 3
+ R K S D +DPLRLFL G E R+LLTA EE EL
Sbjct: 236 YNSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFEL 278