BLASTX nr result

ID: Papaver30_contig00027479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00027479
         (406 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010259215.1| PREDICTED: uncharacterized protein LOC104598...    57   5e-06
ref|XP_002515675.1| Protein MSP1, putative [Ricinus communis] gi...    56   9e-06

>ref|XP_010259215.1| PREDICTED: uncharacterized protein LOC104598732 [Nelumbo nucifera]
           gi|720010328|ref|XP_010259216.1| PREDICTED:
           uncharacterized protein LOC104598732 [Nelumbo nucifera]
           gi|720010331|ref|XP_010259218.1| PREDICTED:
           uncharacterized protein LOC104598732 [Nelumbo nucifera]
           gi|720010334|ref|XP_010259219.1| PREDICTED:
           uncharacterized protein LOC104598732 [Nelumbo nucifera]
          Length = 246

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/72 (51%), Positives = 45/72 (62%)
 Frame = -1

Query: 322 YAGLSSRGSSHLGFQGSPQPAVAI*GGK*ISVQYFKNKSAPDTDGPGSASLSLV*QVSGP 143
           + G+ SR SS + F GSP+ +V +     ISVQY+KN SA   +G  SAS  LV QVSG 
Sbjct: 181 FQGICSRSSSSVSFNGSPESSVGL-----ISVQYYKNISASGANGSVSASPILVEQVSGL 235

Query: 142 GPDEEGRSRVAG 107
              EEG SRVAG
Sbjct: 236 S-SEEGVSRVAG 246


>ref|XP_002515675.1| Protein MSP1, putative [Ricinus communis]
           gi|223545218|gb|EEF46727.1| Protein MSP1, putative
           [Ricinus communis]
          Length = 387

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 23/28 (82%), Positives = 28/28 (100%)
 Frame = -2

Query: 405 RATDHEALTNMKTKFMALWDGFTTNHDS 322
           R+TDHEALTNMKT+FMALWDGFTT+H++
Sbjct: 191 RSTDHEALTNMKTEFMALWDGFTTDHNA 218


Top