BLASTX nr result
ID: Papaver30_contig00023582
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00023582
(1851 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair ... 549 e-153
emb|CBI36057.3| unnamed protein product [Vitis vinifera] 519 e-144
ref|XP_007024314.1| MMS19 nucleotide excision repair protein, pu... 470 e-129
ref|XP_007024313.1| MMS19 nucleotide excision repair protein, pu... 470 e-129
ref|XP_007024312.1| MMS19 nucleotide excision repair protein, pu... 470 e-129
ref|XP_007024310.1| MMS19 nucleotide excision repair protein, pu... 470 e-129
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ... 466 e-128
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ... 466 e-128
gb|KDO51790.1| hypothetical protein CISIN_1g001284mg [Citrus sin... 464 e-128
gb|KDO51789.1| hypothetical protein CISIN_1g001284mg [Citrus sin... 464 e-128
ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citr... 462 e-127
ref|XP_008228424.1| PREDICTED: MMS19 nucleotide excision repair ... 459 e-126
ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prun... 458 e-126
ref|XP_012451237.1| PREDICTED: MMS19 nucleotide excision repair ... 457 e-125
gb|KJB68183.1| hypothetical protein B456_010G230600 [Gossypium r... 457 e-125
ref|XP_012451235.1| PREDICTED: MMS19 nucleotide excision repair ... 457 e-125
ref|XP_012451236.1| PREDICTED: MMS19 nucleotide excision repair ... 457 e-125
gb|KHG04543.1| MMS19 nucleotide excision repair [Gossypium arbor... 453 e-124
ref|XP_010915313.1| PREDICTED: MMS19 nucleotide excision repair ... 453 e-124
ref|XP_010915290.1| PREDICTED: MMS19 nucleotide excision repair ... 453 e-124
>ref|XP_010249497.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Nelumbo
nucifera] gi|719979495|ref|XP_010249498.1| PREDICTED:
MMS19 nucleotide excision repair protein homolog [Nelumbo
nucifera]
Length = 1160
Score = 549 bits (1415), Expect = e-153
Identities = 307/621 (49%), Positives = 403/621 (64%), Gaps = 5/621 (0%)
Frame = -2
Query: 1850 IFASCQEEPIFSGLSEV-DGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMI 1674
IF + IFS S++ D +EN+I KEALICL+K I Q+D L LI D++++MI
Sbjct: 313 IFTFSLQGNIFSLASDLPDTMGFEENDITKEALICLEKVILQNDGIFLSLIVDDEDVEMI 372
Query: 1673 LSSIISSKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTEN 1494
L S+ S SYN++S ESKQKL A G I+ S K+S+S C+++F FPRL+DILGLS+ +
Sbjct: 373 LRSVTISNSYNSLSVESKQKLLAFGRIIVVSAKISSSSCDRIFHFLFPRLMDILGLSSSS 432
Query: 1493 SSRGFTSDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEY 1314
S + +LNFGA+YLC ELL ACR LI+GS + APQ V + WCCLL+ +
Sbjct: 433 LSLECIPYGSPVSFGQLNFGAIYLCTELLAACRDLIVGSEDIAPQSVLMQVSWCCLLQRF 492
Query: 1313 SGSLTNVLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSV 1134
SG LT L S LVTS+K +A I+ GVKG++TLATFPG LPISK IFE IL + +S+
Sbjct: 493 SGPLTTFLSSSLVTSMKQENCDANIYSGVKGLRTLATFPGWFLPISKSIFENILTVFMSI 552
Query: 1133 ISDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPL 954
++ E+T LW+++L AL ++G F E+ HDSE+A YM I SMP L
Sbjct: 553 LTAGCEETLLWKLSLKALVQIGTFTEKFHDSERATSYMNIVVGKIVSSISLDDSSMPYSL 612
Query: 953 RLEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSW 774
+L+AI+ +G +G FML+V Q LEEAIS N F A +GNL+S E++ PLLEC+S KVL W
Sbjct: 613 KLDAIAEIGGSGMHFMLKVIQGLEEAISANFFEASSKGNLKSVEVLIPLLECFSKKVLPW 672
Query: 773 FHKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLI 594
FHK+ E + F F IWNQ+E+N +FNIG + ELL + M+ AVADCSE+ QGLI
Sbjct: 673 FHKTSLFEDIVFHFVINIWNQMEANTTFNIGIKANELLDVTMMVMRQAVADCSEKNQGLI 732
Query: 593 VQKACSVLESSTSFPLKE--IISEPNKV--LQSSATVYSLPCRDELVISLFASVIIALRP 426
VQKA ++L SS SF LKE +S P K LQ + + CRDE +ISLFASVI+ALRP
Sbjct: 733 VQKAYNILSSSASFSLKEPMPLSIPLKTEGLQLTQNLQDFSCRDEWLISLFASVIMALRP 792
Query: 425 KTSVTSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFN 246
+T + VR VL+ F ++L+GHVP+AQALGS+INKL I ++ VS ACTLEEA+ II
Sbjct: 793 QTCLPDVRVVLELFMSVVLKGHVPAAQALGSIINKLPATIDSVEVSRACTLEEAMVIISK 852
Query: 245 NGLQSALSSYLLKDTPMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQK 66
L S + + + +Q N +VGLAWIGKGLLMRGH+K
Sbjct: 853 MNLWSVNGNSSFRKCNVICKSVENLTDLDISANNNAMVQTNVLVGLAWIGKGLLMRGHEK 912
Query: 65 LREIVMILLRCLLSTGNQSSL 3
+++I M LLRCLLST N L
Sbjct: 913 VKDITMTLLRCLLSTINTELL 933
>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
Length = 1146
Score = 519 bits (1337), Expect = e-144
Identities = 297/621 (47%), Positives = 390/621 (62%), Gaps = 8/621 (1%)
Frame = -2
Query: 1850 IFASCQEEPIFSGLSEV-DGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMI 1674
IF S ++EP+ S SE+ D ENEI EA+I LQK I ++ L LI GDK+I+ I
Sbjct: 313 IFCS-EQEPMLSLASELLDHVGFQENEIVTEAIILLQKVILENSGLSLSLIVGDKDINTI 371
Query: 1673 LSSIISSKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTEN 1494
++++ S +SYN++ +SK KL A+G IL S K S +CCN+VF+ FF RL+D LGLS N
Sbjct: 372 VNTVTSFRSYNDIPLQSKHKLCAIGRILYVSAKASITCCNRVFESFFFRLMDTLGLSVRN 431
Query: 1493 SSRGFTSDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEY 1314
SS + FSE LNFGALYLC+ELL ACR L++GS E + VSA++ WCC+L +
Sbjct: 432 SSGDCLPNFDYVFSERLNFGALYLCIELLAACRDLVVGSEELTSKSVSAQESWCCMLHSF 491
Query: 1313 SGSLTNVLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSV 1134
S L S+L S + EA I+ GVKG+Q LATFPG LPISK IFE +L +S+
Sbjct: 492 SSLLMKAFSSVLDASTDKDAYEADIYSGVKGLQILATFPGEFLPISKSIFENVLLTFISI 551
Query: 1133 ISDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPL 954
I + T LW++AL AL ++G FI++ H+SEKA Y I +P L
Sbjct: 552 IVEDFNKTLLWKLALKALVQIGSFIDRFHESEKALSYNYIVVEKIVSLMFLDDFGLPFQL 611
Query: 953 RLEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSW 774
RLEAIS +G G + ML++ Q LE+AI NL +V GNL+SA+I LLECYSNK+L
Sbjct: 612 RLEAISDIGTTGLNVMLKIVQGLEDAIFANLSEVYVHGNLKSAKIAVQLLECYSNKLLPG 671
Query: 773 FHKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLI 594
H +GD E V RFA IWNQ+E++ +F++G Q ELL +TAMKLAV CSE +QG I
Sbjct: 672 IHGAGDFEDVLSRFAVNIWNQIENSMAFSVGAQENELLNATMTAMKLAVGSCSEGSQGKI 731
Query: 593 VQKACSVLESSTSFPLKEIISEPNKV----LQSSATVYSLPCRDELVISLFASVIIALRP 426
++KA SVL S SF L E + V LQ + + CRD+ VISLFAS IIA+RP
Sbjct: 732 IKKAYSVLSSCPSFTLMESMPITGTVQLEGLQHTQDLECFSCRDKWVISLFASAIIAVRP 791
Query: 425 KTSVTSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFN 246
+T + ++R VL F LL+GHVP+AQALGSM+NKL + + +S+ CTLE+ALDIIFN
Sbjct: 792 QTHIPNIRVVLHLFMTNLLKGHVPAAQALGSMVNKLCPKSNGVEISSTCTLEDALDIIFN 851
Query: 245 NGLQSALSSYLLK---DTPMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRG 75
L + + LK +DN +Q AI GLAWIGKGLL+RG
Sbjct: 852 TSLWDSHNHGPLKRCSGIGVDNEMGLANLCLSASNCQL--LQVCAIEGLAWIGKGLLLRG 909
Query: 74 HQKLREIVMILLRCLLSTGNQ 12
H+K+++I MI LRCLLS NQ
Sbjct: 910 HEKVKDITMIFLRCLLSKNNQ 930
>ref|XP_007024314.1| MMS19 nucleotide excision repair protein, putative isoform 5
[Theobroma cacao] gi|508779680|gb|EOY26936.1| MMS19
nucleotide excision repair protein, putative isoform 5
[Theobroma cacao]
Length = 1157
Score = 470 bits (1210), Expect = e-129
Identities = 273/603 (45%), Positives = 376/603 (62%), Gaps = 3/603 (0%)
Frame = -2
Query: 1802 VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIISSKSYNNMSKES 1623
++G + ENEIA EAL LQK I Q+ L LI D++I+MI + I S KSY+ + +S
Sbjct: 328 LEGLCLPENEIAAEALSLLQKLIVQNTNFFLDLIVVDEDINMIFNMISSYKSYHGIPAQS 387
Query: 1622 KQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFTSDDTTGFSEEL 1443
KQ+LHA+GCILS SVK ST+ CN+VF+ FF RL+DILGL NSS +SDD+ +
Sbjct: 388 KQRLHAVGCILSASVKASTASCNRVFECFFSRLMDILGLCVRNSSGNLSSDDSIMIPKRY 447
Query: 1442 NFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTNVLHSILVTSLK 1263
N GALYL +ELL ACR +I S E+ W LL+ +S SLT S + + +
Sbjct: 448 NHGALYLSIELLSACRDVIASSETIIAASAHTEETWSYLLRSFSSSLTKAFCSASICTSE 507
Query: 1262 GNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLEDTFLWRIALNA 1083
++ +A +++GVKG+ LATFP L ISK +FE+IL VS+++ +T LW++AL A
Sbjct: 508 -DSHDADVYFGVKGLLILATFPEGYLLISKPVFEKILMTFVSIVTVDYSNTLLWKLALKA 566
Query: 1082 LREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAISVVGAAGKSFML 903
L ++G FIE+ H+SEK Y+ + S+P PLRLEA+S +G +GKS+ML
Sbjct: 567 LVQIGSFIEKCHESEKEPSYLGLVVEKIVSFSSLGDFSIPFPLRLEALSEIGTSGKSYML 626
Query: 902 RVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGDVEKVAFRFAFG 723
+V + LEEAI NL +V G+ SAEIV LL+CYS+KV+ W + ++V +FA
Sbjct: 627 KVVEGLEEAIYANLSEVYVHGSSNSAEIVTQLLKCYSDKVIPWIQCAKGFDEVPLQFAIH 686
Query: 722 IWNQVESNKSFNIGDQGK-ELLGEMVTAMKLAVADCSEETQGLIVQKACSVLESSTSFPL 546
IWNQ+E + FN K E+L M+ AMKLAVA CSEE Q +IVQK+ +L SSTSFPL
Sbjct: 687 IWNQIELSMVFNATQTNKIEVLDVMMKAMKLAVASCSEENQNIIVQKSYHILSSSTSFPL 746
Query: 545 KEII-SEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKTSVTSVREVLKFFTIMLL 369
KE+ E +++Q V + RDE ++SLFA+V+IA+ P+T V +++ +L F LL
Sbjct: 747 KELFRQESFQIVQ----VDNSSSRDEWILSLFAAVVIAVHPETYVPNIKPLLYLFMTTLL 802
Query: 368 RGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGLQSALSSYLLK-DTPMD 192
+G+V +AQALGS++NKLG + + GV CTLEE +DII N L S+ M
Sbjct: 803 KGNVVTAQALGSVVNKLG--LESAGVQTDCTLEEVMDIILNLSLWIFHSNSSADIQAKMT 860
Query: 191 NGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLREIVMILLRCLLSTGNQ 12
+ C +Q +AIVGLAWIGKGLLMRGH+K+++I MI LRCL G
Sbjct: 861 SAHDISLINLCSSIGSCTSLQIHAIVGLAWIGKGLLMRGHEKVKDITMIFLRCLQPNGRA 920
Query: 11 SSL 3
L
Sbjct: 921 EIL 923
>ref|XP_007024313.1| MMS19 nucleotide excision repair protein, putative isoform 4
[Theobroma cacao] gi|508779679|gb|EOY26935.1| MMS19
nucleotide excision repair protein, putative isoform 4
[Theobroma cacao]
Length = 1136
Score = 470 bits (1210), Expect = e-129
Identities = 273/603 (45%), Positives = 376/603 (62%), Gaps = 3/603 (0%)
Frame = -2
Query: 1802 VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIISSKSYNNMSKES 1623
++G + ENEIA EAL LQK I Q+ L LI D++I+MI + I S KSY+ + +S
Sbjct: 328 LEGLCLPENEIAAEALSLLQKLIVQNTNFFLDLIVVDEDINMIFNMISSYKSYHGIPAQS 387
Query: 1622 KQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFTSDDTTGFSEEL 1443
KQ+LHA+GCILS SVK ST+ CN+VF+ FF RL+DILGL NSS +SDD+ +
Sbjct: 388 KQRLHAVGCILSASVKASTASCNRVFECFFSRLMDILGLCVRNSSGNLSSDDSIMIPKRY 447
Query: 1442 NFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTNVLHSILVTSLK 1263
N GALYL +ELL ACR +I S E+ W LL+ +S SLT S + + +
Sbjct: 448 NHGALYLSIELLSACRDVIASSETIIAASAHTEETWSYLLRSFSSSLTKAFCSASICTSE 507
Query: 1262 GNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLEDTFLWRIALNA 1083
++ +A +++GVKG+ LATFP L ISK +FE+IL VS+++ +T LW++AL A
Sbjct: 508 -DSHDADVYFGVKGLLILATFPEGYLLISKPVFEKILMTFVSIVTVDYSNTLLWKLALKA 566
Query: 1082 LREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAISVVGAAGKSFML 903
L ++G FIE+ H+SEK Y+ + S+P PLRLEA+S +G +GKS+ML
Sbjct: 567 LVQIGSFIEKCHESEKEPSYLGLVVEKIVSFSSLGDFSIPFPLRLEALSEIGTSGKSYML 626
Query: 902 RVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGDVEKVAFRFAFG 723
+V + LEEAI NL +V G+ SAEIV LL+CYS+KV+ W + ++V +FA
Sbjct: 627 KVVEGLEEAIYANLSEVYVHGSSNSAEIVTQLLKCYSDKVIPWIQCAKGFDEVPLQFAIH 686
Query: 722 IWNQVESNKSFNIGDQGK-ELLGEMVTAMKLAVADCSEETQGLIVQKACSVLESSTSFPL 546
IWNQ+E + FN K E+L M+ AMKLAVA CSEE Q +IVQK+ +L SSTSFPL
Sbjct: 687 IWNQIELSMVFNATQTNKIEVLDVMMKAMKLAVASCSEENQNIIVQKSYHILSSSTSFPL 746
Query: 545 KEII-SEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKTSVTSVREVLKFFTIMLL 369
KE+ E +++Q V + RDE ++SLFA+V+IA+ P+T V +++ +L F LL
Sbjct: 747 KELFRQESFQIVQ----VDNSSSRDEWILSLFAAVVIAVHPETYVPNIKPLLYLFMTTLL 802
Query: 368 RGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGLQSALSSYLLK-DTPMD 192
+G+V +AQALGS++NKLG + + GV CTLEE +DII N L S+ M
Sbjct: 803 KGNVVTAQALGSVVNKLG--LESAGVQTDCTLEEVMDIILNLSLWIFHSNSSADIQAKMT 860
Query: 191 NGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLREIVMILLRCLLSTGNQ 12
+ C +Q +AIVGLAWIGKGLLMRGH+K+++I MI LRCL G
Sbjct: 861 SAHDISLINLCSSIGSCTSLQIHAIVGLAWIGKGLLMRGHEKVKDITMIFLRCLQPNGRA 920
Query: 11 SSL 3
L
Sbjct: 921 EIL 923
>ref|XP_007024312.1| MMS19 nucleotide excision repair protein, putative isoform 3
[Theobroma cacao] gi|508779678|gb|EOY26934.1| MMS19
nucleotide excision repair protein, putative isoform 3
[Theobroma cacao]
Length = 1062
Score = 470 bits (1210), Expect = e-129
Identities = 273/603 (45%), Positives = 376/603 (62%), Gaps = 3/603 (0%)
Frame = -2
Query: 1802 VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIISSKSYNNMSKES 1623
++G + ENEIA EAL LQK I Q+ L LI D++I+MI + I S KSY+ + +S
Sbjct: 328 LEGLCLPENEIAAEALSLLQKLIVQNTNFFLDLIVVDEDINMIFNMISSYKSYHGIPAQS 387
Query: 1622 KQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFTSDDTTGFSEEL 1443
KQ+LHA+GCILS SVK ST+ CN+VF+ FF RL+DILGL NSS +SDD+ +
Sbjct: 388 KQRLHAVGCILSASVKASTASCNRVFECFFSRLMDILGLCVRNSSGNLSSDDSIMIPKRY 447
Query: 1442 NFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTNVLHSILVTSLK 1263
N GALYL +ELL ACR +I S E+ W LL+ +S SLT S + + +
Sbjct: 448 NHGALYLSIELLSACRDVIASSETIIAASAHTEETWSYLLRSFSSSLTKAFCSASICTSE 507
Query: 1262 GNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLEDTFLWRIALNA 1083
++ +A +++GVKG+ LATFP L ISK +FE+IL VS+++ +T LW++AL A
Sbjct: 508 -DSHDADVYFGVKGLLILATFPEGYLLISKPVFEKILMTFVSIVTVDYSNTLLWKLALKA 566
Query: 1082 LREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAISVVGAAGKSFML 903
L ++G FIE+ H+SEK Y+ + S+P PLRLEA+S +G +GKS+ML
Sbjct: 567 LVQIGSFIEKCHESEKEPSYLGLVVEKIVSFSSLGDFSIPFPLRLEALSEIGTSGKSYML 626
Query: 902 RVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGDVEKVAFRFAFG 723
+V + LEEAI NL +V G+ SAEIV LL+CYS+KV+ W + ++V +FA
Sbjct: 627 KVVEGLEEAIYANLSEVYVHGSSNSAEIVTQLLKCYSDKVIPWIQCAKGFDEVPLQFAIH 686
Query: 722 IWNQVESNKSFNIGDQGK-ELLGEMVTAMKLAVADCSEETQGLIVQKACSVLESSTSFPL 546
IWNQ+E + FN K E+L M+ AMKLAVA CSEE Q +IVQK+ +L SSTSFPL
Sbjct: 687 IWNQIELSMVFNATQTNKIEVLDVMMKAMKLAVASCSEENQNIIVQKSYHILSSSTSFPL 746
Query: 545 KEII-SEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKTSVTSVREVLKFFTIMLL 369
KE+ E +++Q V + RDE ++SLFA+V+IA+ P+T V +++ +L F LL
Sbjct: 747 KELFRQESFQIVQ----VDNSSSRDEWILSLFAAVVIAVHPETYVPNIKPLLYLFMTTLL 802
Query: 368 RGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGLQSALSSYLLK-DTPMD 192
+G+V +AQALGS++NKLG + + GV CTLEE +DII N L S+ M
Sbjct: 803 KGNVVTAQALGSVVNKLG--LESAGVQTDCTLEEVMDIILNLSLWIFHSNSSADIQAKMT 860
Query: 191 NGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLREIVMILLRCLLSTGNQ 12
+ C +Q +AIVGLAWIGKGLLMRGH+K+++I MI LRCL G
Sbjct: 861 SAHDISLINLCSSIGSCTSLQIHAIVGLAWIGKGLLMRGHEKVKDITMIFLRCLQPNGRA 920
Query: 11 SSL 3
L
Sbjct: 921 EIL 923
>ref|XP_007024310.1| MMS19 nucleotide excision repair protein, putative isoform 1
[Theobroma cacao] gi|590619491|ref|XP_007024311.1| MMS19
nucleotide excision repair protein, putative isoform 1
[Theobroma cacao] gi|508779676|gb|EOY26932.1| MMS19
nucleotide excision repair protein, putative isoform 1
[Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
nucleotide excision repair protein, putative isoform 1
[Theobroma cacao]
Length = 1149
Score = 470 bits (1210), Expect = e-129
Identities = 273/603 (45%), Positives = 376/603 (62%), Gaps = 3/603 (0%)
Frame = -2
Query: 1802 VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIISSKSYNNMSKES 1623
++G + ENEIA EAL LQK I Q+ L LI D++I+MI + I S KSY+ + +S
Sbjct: 328 LEGLCLPENEIAAEALSLLQKLIVQNTNFFLDLIVVDEDINMIFNMISSYKSYHGIPAQS 387
Query: 1622 KQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFTSDDTTGFSEEL 1443
KQ+LHA+GCILS SVK ST+ CN+VF+ FF RL+DILGL NSS +SDD+ +
Sbjct: 388 KQRLHAVGCILSASVKASTASCNRVFECFFSRLMDILGLCVRNSSGNLSSDDSIMIPKRY 447
Query: 1442 NFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTNVLHSILVTSLK 1263
N GALYL +ELL ACR +I S E+ W LL+ +S SLT S + + +
Sbjct: 448 NHGALYLSIELLSACRDVIASSETIIAASAHTEETWSYLLRSFSSSLTKAFCSASICTSE 507
Query: 1262 GNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLEDTFLWRIALNA 1083
++ +A +++GVKG+ LATFP L ISK +FE+IL VS+++ +T LW++AL A
Sbjct: 508 -DSHDADVYFGVKGLLILATFPEGYLLISKPVFEKILMTFVSIVTVDYSNTLLWKLALKA 566
Query: 1082 LREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAISVVGAAGKSFML 903
L ++G FIE+ H+SEK Y+ + S+P PLRLEA+S +G +GKS+ML
Sbjct: 567 LVQIGSFIEKCHESEKEPSYLGLVVEKIVSFSSLGDFSIPFPLRLEALSEIGTSGKSYML 626
Query: 902 RVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGDVEKVAFRFAFG 723
+V + LEEAI NL +V G+ SAEIV LL+CYS+KV+ W + ++V +FA
Sbjct: 627 KVVEGLEEAIYANLSEVYVHGSSNSAEIVTQLLKCYSDKVIPWIQCAKGFDEVPLQFAIH 686
Query: 722 IWNQVESNKSFNIGDQGK-ELLGEMVTAMKLAVADCSEETQGLIVQKACSVLESSTSFPL 546
IWNQ+E + FN K E+L M+ AMKLAVA CSEE Q +IVQK+ +L SSTSFPL
Sbjct: 687 IWNQIELSMVFNATQTNKIEVLDVMMKAMKLAVASCSEENQNIIVQKSYHILSSSTSFPL 746
Query: 545 KEII-SEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKTSVTSVREVLKFFTIMLL 369
KE+ E +++Q V + RDE ++SLFA+V+IA+ P+T V +++ +L F LL
Sbjct: 747 KELFRQESFQIVQ----VDNSSSRDEWILSLFAAVVIAVHPETYVPNIKPLLYLFMTTLL 802
Query: 368 RGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGLQSALSSYLLK-DTPMD 192
+G+V +AQALGS++NKLG + + GV CTLEE +DII N L S+ M
Sbjct: 803 KGNVVTAQALGSVVNKLG--LESAGVQTDCTLEEVMDIILNLSLWIFHSNSSADIQAKMT 860
Query: 191 NGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLREIVMILLRCLLSTGNQ 12
+ C +Q +AIVGLAWIGKGLLMRGH+K+++I MI LRCL G
Sbjct: 861 SAHDISLINLCSSIGSCTSLQIHAIVGLAWIGKGLLMRGHEKVKDITMIFLRCLQPNGRA 920
Query: 11 SSL 3
L
Sbjct: 921 EIL 923
>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Citrus sinensis]
Length = 1151
Score = 466 bits (1199), Expect = e-128
Identities = 271/613 (44%), Positives = 363/613 (59%), Gaps = 5/613 (0%)
Frame = -2
Query: 1829 EPIFSGLSE-VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIISS 1653
EP S SE +DG EN I E+L L Q+ L I GD++I++I SI S
Sbjct: 316 EPTLSFASESLDGVGFRENVILTESLNLLDTVFKQNSGLFLSWIIGDEDINLIFKSISSY 375
Query: 1652 KSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFTS 1473
K+Y +S +SKQKLHA+G ILS S K S + CN V + FFP L+ LGLS NS++
Sbjct: 376 KTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFFPCLMHALGLSVGNSTQDCFP 435
Query: 1472 DDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTNV 1293
+D +LN GALYLC+EL+ ACR L+ S E A + W CLL+ YS SL
Sbjct: 436 NDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAAPANERWYCLLQSYSASLAKA 495
Query: 1292 LHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLED 1113
L S L TS ++ E +++GVKG+ L TF G SL IS IFE IL S+I E+
Sbjct: 496 LRSTLETSANEDSYETNVYFGVKGLLILGTFRGGSLIISNSIFENILLTFTSIIISEFEN 555
Query: 1112 TFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAISV 933
T LW++AL AL +G FI++ ++SEKA YM + SMP PL+LEAIS
Sbjct: 556 TLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVSLASSHDFSMPFPLKLEAISE 615
Query: 932 VGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGDV 753
+GA G++++L++ Q LEEA+ NL+ V GN +SAE+V LLECYSNKVL H+ G
Sbjct: 616 IGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVVQLLECYSNKVLPRIHEIGGF 675
Query: 752 EKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLIVQKACSV 573
E+V RFA IWN +E + +F+ K LL + AMKLAV CS E+Q ++ QKA +V
Sbjct: 676 EEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKLAVGSCSVESQNIVFQKAFTV 735
Query: 572 LESSTSFPLKEIISEPNKVL---QSSATVYSLPCRDELVISLFASVIIALRPKTSVTSVR 402
L T FPL++ S +L Q + R+ + SLFASVIIA RP+T + +VR
Sbjct: 736 LSLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWICSLFASVIIAARPQTHIPNVR 795
Query: 401 EVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGLQSALS 222
V++ F LL+G+VP+AQALGSM+NKLG+ + V CTLEEA+DIIF++ L S
Sbjct: 796 LVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGNCTLEEAMDIIFDSKLWSFND 855
Query: 221 SYLLKDT-PMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLREIVMI 45
S L+ ++NG +Q +AI GLAWIGKGLLMRGH+K+++I M
Sbjct: 856 SVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLAWIGKGLLMRGHEKVKDITMT 915
Query: 44 LLRCLLSTGNQSS 6
+ CLLS S
Sbjct: 916 FIECLLSNSKLGS 928
>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Citrus sinensis]
Length = 1155
Score = 466 bits (1199), Expect = e-128
Identities = 271/613 (44%), Positives = 363/613 (59%), Gaps = 5/613 (0%)
Frame = -2
Query: 1829 EPIFSGLSE-VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIISS 1653
EP S SE +DG EN I E+L L Q+ L I GD++I++I SI S
Sbjct: 316 EPTLSFASESLDGVGFRENVILTESLNLLDTVFKQNSGLFLSWIIGDEDINLIFKSISSY 375
Query: 1652 KSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFTS 1473
K+Y +S +SKQKLHA+G ILS S K S + CN V + FFP L+ LGLS NS++
Sbjct: 376 KTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFFPCLMHALGLSVGNSTQDCFP 435
Query: 1472 DDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTNV 1293
+D +LN GALYLC+EL+ ACR L+ S E A + W CLL+ YS SL
Sbjct: 436 NDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAAPANERWYCLLQSYSASLAKA 495
Query: 1292 LHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLED 1113
L S L TS ++ E +++GVKG+ L TF G SL IS IFE IL S+I E+
Sbjct: 496 LRSTLETSANEDSYETNVYFGVKGLLILGTFRGGSLIISNSIFENILLTFTSIIISEFEN 555
Query: 1112 TFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAISV 933
T LW++AL AL +G FI++ ++SEKA YM + SMP PL+LEAIS
Sbjct: 556 TLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVSLASSHDFSMPFPLKLEAISE 615
Query: 932 VGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGDV 753
+GA G++++L++ Q LEEA+ NL+ V GN +SAE+V LLECYSNKVL H+ G
Sbjct: 616 IGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVVQLLECYSNKVLPRIHEIGGF 675
Query: 752 EKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLIVQKACSV 573
E+V RFA IWN +E + +F+ K LL + AMKLAV CS E+Q ++ QKA +V
Sbjct: 676 EEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKLAVGSCSVESQNIVFQKAFTV 735
Query: 572 LESSTSFPLKEIISEPNKVL---QSSATVYSLPCRDELVISLFASVIIALRPKTSVTSVR 402
L T FPL++ S +L Q + R+ + SLFASVIIA RP+T + +VR
Sbjct: 736 LSLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWICSLFASVIIAARPQTHIPNVR 795
Query: 401 EVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGLQSALS 222
V++ F LL+G+VP+AQALGSM+NKLG+ + V CTLEEA+DIIF++ L S
Sbjct: 796 LVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGNCTLEEAMDIIFDSKLWSFND 855
Query: 221 SYLLKDT-PMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLREIVMI 45
S L+ ++NG +Q +AI GLAWIGKGLLMRGH+K+++I M
Sbjct: 856 SVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLAWIGKGLLMRGHEKVKDITMT 915
Query: 44 LLRCLLSTGNQSS 6
+ CLLS S
Sbjct: 916 FIECLLSNSKLGS 928
>gb|KDO51790.1| hypothetical protein CISIN_1g001284mg [Citrus sinensis]
Length = 1107
Score = 464 bits (1195), Expect = e-128
Identities = 270/613 (44%), Positives = 363/613 (59%), Gaps = 5/613 (0%)
Frame = -2
Query: 1829 EPIFSGLSE-VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIISS 1653
EP S SE +DG +N I E+L L Q+ L I GD++I++I SI S
Sbjct: 268 EPTLSFASESLDGVGFRDNVILTESLNLLDTVFKQNSGLFLSWIIGDEDINLIFKSISSF 327
Query: 1652 KSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFTS 1473
K+Y +S +SKQKLHA+G ILS S K S + CN V + FFP L+ LGLS NS++
Sbjct: 328 KTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFFPCLMHPLGLSVGNSTQDCFP 387
Query: 1472 DDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTNV 1293
+D +LN GALYLC+EL+ ACR L+ S E A + W CLL+ YS SL
Sbjct: 388 NDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAAPANERWYCLLQSYSASLAKA 447
Query: 1292 LHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLED 1113
L S L TS ++ E +++GVKG+ L TF G SL IS IFE IL S+I E+
Sbjct: 448 LRSTLETSANEDSYETNVYFGVKGLLILGTFSGGSLIISNSIFENILLTFTSIIISEFEN 507
Query: 1112 TFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAISV 933
T LW++AL AL +G FI++ ++SEKA YM + SMP PL+LEAIS
Sbjct: 508 TLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVSLASSHDFSMPFPLKLEAISE 567
Query: 932 VGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGDV 753
+GA G++++L++ Q LEEA+ NL+ V GN +SAE+V LLECYSNKVL H+ G
Sbjct: 568 IGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVVQLLECYSNKVLPRIHEIGGF 627
Query: 752 EKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLIVQKACSV 573
E+V RFA IWN +E + +F+ K LL + AMKLAV CS E+Q ++ QKA +V
Sbjct: 628 EEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKLAVGSCSVESQNIVFQKAFTV 687
Query: 572 LESSTSFPLKEIISEPNKVL---QSSATVYSLPCRDELVISLFASVIIALRPKTSVTSVR 402
L T FPL++ S +L Q + R+ + SLFASVIIA RP+T + +VR
Sbjct: 688 LSLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWICSLFASVIIAARPQTHIPNVR 747
Query: 401 EVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGLQSALS 222
V++ F LL+G+VP+AQALGSM+NKLG+ + V CTLEEA+DIIF++ L S
Sbjct: 748 LVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGNCTLEEAMDIIFDSKLWSFND 807
Query: 221 SYLLKDT-PMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLREIVMI 45
S L+ ++NG +Q +AI GLAWIGKGLLMRGH+K+++I M
Sbjct: 808 SVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLAWIGKGLLMRGHEKVKDITMT 867
Query: 44 LLRCLLSTGNQSS 6
+ CLLS S
Sbjct: 868 FIECLLSNSKLGS 880
>gb|KDO51789.1| hypothetical protein CISIN_1g001284mg [Citrus sinensis]
Length = 1103
Score = 464 bits (1195), Expect = e-128
Identities = 270/613 (44%), Positives = 363/613 (59%), Gaps = 5/613 (0%)
Frame = -2
Query: 1829 EPIFSGLSE-VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIISS 1653
EP S SE +DG +N I E+L L Q+ L I GD++I++I SI S
Sbjct: 268 EPTLSFASESLDGVGFRDNVILTESLNLLDTVFKQNSGLFLSWIIGDEDINLIFKSISSF 327
Query: 1652 KSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFTS 1473
K+Y +S +SKQKLHA+G ILS S K S + CN V + FFP L+ LGLS NS++
Sbjct: 328 KTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFFPCLMHPLGLSVGNSTQDCFP 387
Query: 1472 DDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTNV 1293
+D +LN GALYLC+EL+ ACR L+ S E A + W CLL+ YS SL
Sbjct: 388 NDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAAPANERWYCLLQSYSASLAKA 447
Query: 1292 LHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLED 1113
L S L TS ++ E +++GVKG+ L TF G SL IS IFE IL S+I E+
Sbjct: 448 LRSTLETSANEDSYETNVYFGVKGLLILGTFSGGSLIISNSIFENILLTFTSIIISEFEN 507
Query: 1112 TFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAISV 933
T LW++AL AL +G FI++ ++SEKA YM + SMP PL+LEAIS
Sbjct: 508 TLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVSLASSHDFSMPFPLKLEAISE 567
Query: 932 VGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGDV 753
+GA G++++L++ Q LEEA+ NL+ V GN +SAE+V LLECYSNKVL H+ G
Sbjct: 568 IGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVVQLLECYSNKVLPRIHEIGGF 627
Query: 752 EKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLIVQKACSV 573
E+V RFA IWN +E + +F+ K LL + AMKLAV CS E+Q ++ QKA +V
Sbjct: 628 EEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKLAVGSCSVESQNIVFQKAFTV 687
Query: 572 LESSTSFPLKEIISEPNKVL---QSSATVYSLPCRDELVISLFASVIIALRPKTSVTSVR 402
L T FPL++ S +L Q + R+ + SLFASVIIA RP+T + +VR
Sbjct: 688 LSLGTYFPLEDAASNIPILLNEFQLTQETSISSSREAWICSLFASVIIAARPQTHIPNVR 747
Query: 401 EVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGLQSALS 222
V++ F LL+G+VP+AQALGSM+NKLG+ + V CTLEEA+DIIF++ L S
Sbjct: 748 LVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGNCTLEEAMDIIFDSKLWSFND 807
Query: 221 SYLLKDT-PMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLREIVMI 45
S L+ ++NG +Q +AI GLAWIGKGLLMRGH+K+++I M
Sbjct: 808 SVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLAWIGKGLLMRGHEKVKDITMT 867
Query: 44 LLRCLLSTGNQSS 6
+ CLLS S
Sbjct: 868 FIECLLSNSKLGS 880
>ref|XP_006426876.1| hypothetical protein CICLE_v10024743mg [Citrus clementina]
gi|557528866|gb|ESR40116.1| hypothetical protein
CICLE_v10024743mg [Citrus clementina]
Length = 1155
Score = 462 bits (1188), Expect = e-127
Identities = 270/614 (43%), Positives = 364/614 (59%), Gaps = 6/614 (0%)
Frame = -2
Query: 1829 EPIFSGLSE-VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIISS 1653
EP S SE +DG +N I E+L L Q+ L I GD++I++I SI S
Sbjct: 316 EPTLSFASESLDGVGFRDNVILTESLNLLDTVFKQNSGLFLSWIIGDEDINLIFKSISSF 375
Query: 1652 KSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFTS 1473
K+Y +S +SKQKLHA+G ILS S K S + CN V + FFP L+ LGLS NS++
Sbjct: 376 KTYKEISLQSKQKLHAVGSILSVSAKASPAACNSVMESFFPCLMHPLGLSVGNSTQDCFP 435
Query: 1472 DDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTNV 1293
+D +LN GALYLC+EL+ ACR L+ S E A + W CLL+ YS SL
Sbjct: 436 NDGNVLRGKLNHGALYLCIELMTACRELMASSEEFKSVAAPANERWYCLLQSYSASLAKA 495
Query: 1292 LHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLED 1113
L S L TS ++ E +++GVKG+ L TF G SL IS IFE IL S+I E+
Sbjct: 496 LRSTLETSANEDSYETNVYFGVKGLLILGTFSGGSLIISNSIFENILLTFTSIIISEFEN 555
Query: 1112 TFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAISV 933
T LW++AL AL +G FI++ ++SEKA YM + SMP PL+LEAIS
Sbjct: 556 TLLWKLALKALVHIGSFIDRFNESEKALSYMDVVIEKIVSLASSHDFSMPFPLKLEAISE 615
Query: 932 VGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGDV 753
+GA G++++L++ Q LEEA+ NL+ V GN +SAE+V LLECYSNKVL H+ G
Sbjct: 616 IGATGRNYLLKIVQGLEEAVCANLYEVLVHGNPKSAEVVVQLLECYSNKVLPRIHEIGGF 675
Query: 752 EKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLIVQKACSV 573
E+V RFA IWN +E + +F+ K LL + AMKLAV CS E+Q ++ QKA +V
Sbjct: 676 EEVLLRFAVNIWNLIEKSVTFSSQVHEKGLLDATMKAMKLAVGSCSVESQNIVFQKAFTV 735
Query: 572 LESSTSFPLKEIIS----EPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKTSVTSV 405
L T FPL++ S + N+ + T S R+ + SLFASVIIA P+T + +V
Sbjct: 736 LSLGTYFPLEDAASNIPIQLNEFQLTQETSIS-SSREAWICSLFASVIIAACPQTHIPNV 794
Query: 404 REVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGLQSAL 225
R V++ F LL+G+VP+AQALGSM+NKLG+ + V CTLEEA+DIIF++ L S
Sbjct: 795 RLVIRLFMTTLLKGNVPAAQALGSMVNKLGLKSNGTEVHGNCTLEEAMDIIFDSKLWSFN 854
Query: 224 SSYLLKDT-PMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLREIVM 48
S L+ ++NG +Q +AI GLAWIGKGLLMRGH+K+++I M
Sbjct: 855 DSVTLRSNGGLENGSSIGLTDICRGATNIRSLQVHAIAGLAWIGKGLLMRGHEKVKDITM 914
Query: 47 ILLRCLLSTGNQSS 6
+ CLLS S
Sbjct: 915 TFIECLLSNSKLGS 928
>ref|XP_008228424.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Prunus
mume]
Length = 1159
Score = 459 bits (1180), Expect = e-126
Identities = 265/620 (42%), Positives = 372/620 (60%), Gaps = 15/620 (2%)
Frame = -2
Query: 1832 EEPIFSGLSE-VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIIS 1656
E+P S SE + G ENEIA EAL+ LQK Q++A L LI D+ I+++ +SI S
Sbjct: 318 EKPAMSFTSEPLYGLGFQENEIATEALMLLQKVTLQNEALFLSLIIQDEGINIVFNSIAS 377
Query: 1655 SKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFT 1476
+ YNN+ + KQ LHA+G IL K S + CN VF+ FFPRL++ L +S NSS T
Sbjct: 378 HEHYNNIPLQGKQWLHAVGRILYIISKTSMASCNSVFESFFPRLMNTLEISVTNSSGDCT 437
Query: 1475 SDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTN 1296
++ + S++ NFGALYLCVEL+ ACR LI+ + AP+P + ++ +L+ ++ SL N
Sbjct: 438 LNENSFPSKKYNFGALYLCVELIAACRDLIMRLKDLAPKPDTPQETCRYMLQSFADSLVN 497
Query: 1295 VLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLE 1116
S L T+ A I++ VKG+Q LATFPG LPISK +F IL IL+S+I
Sbjct: 498 AFSSSLATNANEVAHGADIYFKVKGLQILATFPGDFLPISKFLFANILTILMSIILVDFN 557
Query: 1115 DTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAIS 936
LW++ L AL +G F++ H+SEKA YM +MP L+LEA+S
Sbjct: 558 KILLWKLVLKALVHIGSFVDMYHESEKALCYMGAVVDKTVSLVSRDDFNMPFSLKLEAVS 617
Query: 935 VVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGD 756
+GA+G++ ML++ +EEAI L S +V GNL+SAE LLECY NK+LSW +++G
Sbjct: 618 EIGASGRNHMLKIVHGMEEAIVAKL-SDYVHGNLKSAEKTIQLLECYCNKILSWINETGG 676
Query: 755 VEKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLIVQKACS 576
+E+V RF IW+ VES K F+I Q +ELL + AMKLA+ CSEE+Q +I+ KA S
Sbjct: 677 LEEVLLRFVINIWSCVESCKDFSIQVQEEELLDATMMAMKLAIGSCSEESQNIIIHKAYS 736
Query: 575 VLESSTSFPLKE--------------IISEPNKVLQSSATVYSLPCRDELVISLFASVII 438
V+ SS S P K+ + + +K + RDE ++SLFASVII
Sbjct: 737 VISSSISIPFKDSLDATSSIQLEELRVSEQIDKSSHRDDQIDKFSRRDEWILSLFASVII 796
Query: 437 ALRPKTSVTSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALD 258
A+RPK + +V+ +L F +L+G VP+AQA GS+INKLG + SN CTLEEA+D
Sbjct: 797 AVRPKAQIVNVKGILHLFMTTVLKGCVPAAQASGSVINKLGTKSNETANSNDCTLEEAVD 856
Query: 257 IIFNNGLQSALSSYLLKDTPMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMR 78
+IF+ L + + +L+ NG +Q +AIVGLAWIGKGLL+
Sbjct: 857 MIFSTKLWNLNENGVLQTCGSGNGSKVGLTDLCLGFSSNKLLQVHAIVGLAWIGKGLLLL 916
Query: 77 GHQKLREIVMILLRCLLSTG 18
GH+K++++ ILL CLLS G
Sbjct: 917 GHEKVKDVTKILLECLLSEG 936
>ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
gi|462413691|gb|EMJ18740.1| hypothetical protein
PRUPE_ppa023072mg [Prunus persica]
Length = 1158
Score = 458 bits (1179), Expect = e-126
Identities = 266/620 (42%), Positives = 370/620 (59%), Gaps = 15/620 (2%)
Frame = -2
Query: 1832 EEPIFSGLSE-VDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMILSSIIS 1656
E+P S SE + G ENEIA EAL+ LQK Q++A L LI D+ I+++ +SI S
Sbjct: 318 EKPDMSFTSEPLYGLGFQENEIATEALMLLQKVTLQNEALFLSLIIQDEGINIVFNSIAS 377
Query: 1655 SKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFT 1476
+ YNN+ + KQ LHA+G IL K S + CN VF+ FFPRL++ L +S NS+ T
Sbjct: 378 HEHYNNIPLQGKQWLHAVGRILYIISKTSMASCNSVFESFFPRLMNTLEISVTNSAGDCT 437
Query: 1475 SDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTN 1296
++ T S++ NFGALYLCVEL+ ACR LI+ S + AP+P + ++ +L+ ++ SL N
Sbjct: 438 LNENTFPSKKFNFGALYLCVELIAACRDLIMRSKDLAPKPDTPQETCRYMLQSFADSLVN 497
Query: 1295 VLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVISDSLE 1116
S L T+ A I++ VKG+Q LATFPG LPISK +F IL IL+S+I
Sbjct: 498 AFSSSLATNANEVAHGADIYFKVKGLQILATFPGDFLPISKFLFANILTILMSIILVDFN 557
Query: 1115 DTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLRLEAIS 936
LW++ L AL +G F++ H+SEKA YM MP L+LEA S
Sbjct: 558 KILLWKLVLKALVHIGSFVDVYHESEKALGYMGAVVDKTVSLVSRDDVKMPFSLKLEAAS 617
Query: 935 VVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWFHKSGD 756
+GA+G++ ML++ Q +EEAI L S +V GNL+SAE LLECY NK+LSW +++G
Sbjct: 618 EIGASGRNHMLKIVQGMEEAIVAKL-SDYVHGNLKSAEKTIQLLECYCNKILSWINETGG 676
Query: 755 VEKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLIVQKACS 576
+E+V RF IWN VES K F+I Q +ELL + AMKLA+ CSEE+Q +I+ KA S
Sbjct: 677 LEEVLLRFVINIWNCVESCKDFSIQVQEEELLDATMMAMKLAIGSCSEESQNIIIHKAYS 736
Query: 575 VLESSTSFPLKEIISEPNKVLQSSATVY--------------SLPCRDELVISLFASVII 438
V+ SS S P KE + + + +V RDE ++S FASVII
Sbjct: 737 VISSSISIPFKESLDATSSIQLEELSVSEQIDNSSHRDDQIDKFSLRDEWILSHFASVII 796
Query: 437 ALRPKTSVTSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALD 258
A+RPK + +V+ +L F +L+G VP+AQALGS+INKLG + S CTLEEA+D
Sbjct: 797 AVRPKAQIVNVKGILHLFMTTVLKGCVPAAQALGSVINKLGTKSNETANSIDCTLEEAVD 856
Query: 257 IIFNNGLQSALSSYLLKDTPMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMR 78
+IF L + + +L+ NG ++ +A+VGLAWIGKGLL+
Sbjct: 857 MIFRTKLWNLNENGVLRTCGSGNGSKVGLTDLCLGFSSNKLLRVHAVVGLAWIGKGLLLL 916
Query: 77 GHQKLREIVMILLRCLLSTG 18
GH+K++++ ILL CLLS G
Sbjct: 917 GHEKVKDVTKILLECLLSEG 936
>ref|XP_012451237.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X3 [Gossypium raimondii]
Length = 1040
Score = 457 bits (1175), Expect = e-125
Identities = 269/617 (43%), Positives = 378/617 (61%), Gaps = 6/617 (0%)
Frame = -2
Query: 1850 IFASCQEEPIFSGLSEVDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMIL 1671
IF S +F+ S ++G + +NEIA EAL LQK I Q+ L LI GD++I MI
Sbjct: 201 IFISLDSVLLFTPES-LEGPDLPKNEIAAEALSLLQKLIVQNTKLFLDLIVGDEDISMIF 259
Query: 1670 SSIISSKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENS 1491
++I + K+Y+ + E KQ+L+A+G IL T+ K S CN+VF+ FF RL+DILGLS NS
Sbjct: 260 NTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQVSCNRVFECFFSRLMDILGLSARNS 319
Query: 1490 SRGFTSDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYS 1311
S D++ S+ N GALYL +E+L ACR +I S E+ W LL+ +S
Sbjct: 320 SGQPYFDESILISKRCNHGALYLSIEILSACRDMIASSETILAATSHTEETWKYLLQSFS 379
Query: 1310 GSLTNVLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVI 1131
+LT S + S +G T +A + GVKG+ LATFPG ISK +FE+IL + VS+I
Sbjct: 380 PALTMGFCSAFICSSEG-THDAATYIGVKGLLILATFPGGYSLISKTVFEKILVMFVSII 438
Query: 1130 SDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLR 951
++ W++AL AL E+G FIE+ H+SEK YM I +P PLR
Sbjct: 439 NEEYSKRLSWKLALKALGEIGSFIERYHESEKEPSYMDIVVEKILSLAFVGDFGIPFPLR 498
Query: 950 LEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWF 771
LEA+S +G +G+S+ML+V Q LEEAI NL+ +V G+ SAEIV +L+CYS+KV+ W
Sbjct: 499 LEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYVHGSTSSAEIVTHILKCYSDKVIPWV 558
Query: 770 HKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKE-LLGEMVTAMKLAVADCSEETQGLI 594
H E+V +FA IWNQ+E++ FN K+ +L M+ AMKLAVA+CSEE Q +I
Sbjct: 559 HCEKGFEEVLLQFAINIWNQIENSTHFNASQTNKKGVLDVMMKAMKLAVANCSEEKQNII 618
Query: 593 VQKACSVLESSTSFPLKEIISEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKTSV 414
VQK+ ++L SS SFPL+E++ + Q + V + RDE ++SLFA+V IA+ P+T +
Sbjct: 619 VQKSYNILSSSISFPLEELLLQER--FQIAQEVDNSSSRDEWILSLFAAVTIAVHPQTHI 676
Query: 413 TSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGL- 237
+ R ++ F LL+G+V +AQALGSM+NKL + + S+ CTLEEA+DII N L
Sbjct: 677 PNTRSIVSLFMTTLLKGNVVAAQALGSMVNKLDLKSTRGQTSSDCTLEEAMDIILNLSLW 736
Query: 236 ---QSALSSYLLKDTPM-DNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQ 69
++ SS K + D G +Q +AI+GLAWIGKGLLMRGH+
Sbjct: 737 IFDTNSSSSIQSKTISVHDTGLNDLSNGVGSCN----SLQIHAILGLAWIGKGLLMRGHE 792
Query: 68 KLREIVMILLRCLLSTG 18
K+ +I M+ LRCL S+G
Sbjct: 793 KVNDITMVFLRCLQSSG 809
>gb|KJB68183.1| hypothetical protein B456_010G230600 [Gossypium raimondii]
Length = 1063
Score = 457 bits (1175), Expect = e-125
Identities = 269/617 (43%), Positives = 378/617 (61%), Gaps = 6/617 (0%)
Frame = -2
Query: 1850 IFASCQEEPIFSGLSEVDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMIL 1671
IF S +F+ S ++G + +NEIA EAL LQK I Q+ L LI GD++I MI
Sbjct: 224 IFISLDSVLLFTPES-LEGPDLPKNEIAAEALSLLQKLIVQNTKLFLDLIVGDEDISMIF 282
Query: 1670 SSIISSKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENS 1491
++I + K+Y+ + E KQ+L+A+G IL T+ K S CN+VF+ FF RL+DILGLS NS
Sbjct: 283 NTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQVSCNRVFECFFSRLMDILGLSARNS 342
Query: 1490 SRGFTSDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYS 1311
S D++ S+ N GALYL +E+L ACR +I S E+ W LL+ +S
Sbjct: 343 SGQPYFDESILISKRCNHGALYLSIEILSACRDMIASSETILAATSHTEETWKYLLQSFS 402
Query: 1310 GSLTNVLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVI 1131
+LT S + S +G T +A + GVKG+ LATFPG ISK +FE+IL + VS+I
Sbjct: 403 PALTMGFCSAFICSSEG-THDAATYIGVKGLLILATFPGGYSLISKTVFEKILVMFVSII 461
Query: 1130 SDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLR 951
++ W++AL AL E+G FIE+ H+SEK YM I +P PLR
Sbjct: 462 NEEYSKRLSWKLALKALGEIGSFIERYHESEKEPSYMDIVVEKILSLAFVGDFGIPFPLR 521
Query: 950 LEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWF 771
LEA+S +G +G+S+ML+V Q LEEAI NL+ +V G+ SAEIV +L+CYS+KV+ W
Sbjct: 522 LEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYVHGSTSSAEIVTHILKCYSDKVIPWV 581
Query: 770 HKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKE-LLGEMVTAMKLAVADCSEETQGLI 594
H E+V +FA IWNQ+E++ FN K+ +L M+ AMKLAVA+CSEE Q +I
Sbjct: 582 HCEKGFEEVLLQFAINIWNQIENSTHFNASQTNKKGVLDVMMKAMKLAVANCSEEKQNII 641
Query: 593 VQKACSVLESSTSFPLKEIISEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKTSV 414
VQK+ ++L SS SFPL+E++ + Q + V + RDE ++SLFA+V IA+ P+T +
Sbjct: 642 VQKSYNILSSSISFPLEELLLQER--FQIAQEVDNSSSRDEWILSLFAAVTIAVHPQTHI 699
Query: 413 TSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGL- 237
+ R ++ F LL+G+V +AQALGSM+NKL + + S+ CTLEEA+DII N L
Sbjct: 700 PNTRSIVSLFMTTLLKGNVVAAQALGSMVNKLDLKSTRGQTSSDCTLEEAMDIILNLSLW 759
Query: 236 ---QSALSSYLLKDTPM-DNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQ 69
++ SS K + D G +Q +AI+GLAWIGKGLLMRGH+
Sbjct: 760 IFDTNSSSSIQSKTISVHDTGLNDLSNGVGSCN----SLQIHAILGLAWIGKGLLMRGHE 815
Query: 68 KLREIVMILLRCLLSTG 18
K+ +I M+ LRCL S+G
Sbjct: 816 KVNDITMVFLRCLQSSG 832
>ref|XP_012451235.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Gossypium raimondii] gi|763801227|gb|KJB68182.1|
hypothetical protein B456_010G230600 [Gossypium
raimondii]
Length = 1152
Score = 457 bits (1175), Expect = e-125
Identities = 269/617 (43%), Positives = 378/617 (61%), Gaps = 6/617 (0%)
Frame = -2
Query: 1850 IFASCQEEPIFSGLSEVDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMIL 1671
IF S +F+ S ++G + +NEIA EAL LQK I Q+ L LI GD++I MI
Sbjct: 313 IFISLDSVLLFTPES-LEGPDLPKNEIAAEALSLLQKLIVQNTKLFLDLIVGDEDISMIF 371
Query: 1670 SSIISSKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENS 1491
++I + K+Y+ + E KQ+L+A+G IL T+ K S CN+VF+ FF RL+DILGLS NS
Sbjct: 372 NTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQVSCNRVFECFFSRLMDILGLSARNS 431
Query: 1490 SRGFTSDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYS 1311
S D++ S+ N GALYL +E+L ACR +I S E+ W LL+ +S
Sbjct: 432 SGQPYFDESILISKRCNHGALYLSIEILSACRDMIASSETILAATSHTEETWKYLLQSFS 491
Query: 1310 GSLTNVLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVI 1131
+LT S + S +G T +A + GVKG+ LATFPG ISK +FE+IL + VS+I
Sbjct: 492 PALTMGFCSAFICSSEG-THDAATYIGVKGLLILATFPGGYSLISKTVFEKILVMFVSII 550
Query: 1130 SDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLR 951
++ W++AL AL E+G FIE+ H+SEK YM I +P PLR
Sbjct: 551 NEEYSKRLSWKLALKALGEIGSFIERYHESEKEPSYMDIVVEKILSLAFVGDFGIPFPLR 610
Query: 950 LEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWF 771
LEA+S +G +G+S+ML+V Q LEEAI NL+ +V G+ SAEIV +L+CYS+KV+ W
Sbjct: 611 LEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYVHGSTSSAEIVTHILKCYSDKVIPWV 670
Query: 770 HKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKE-LLGEMVTAMKLAVADCSEETQGLI 594
H E+V +FA IWNQ+E++ FN K+ +L M+ AMKLAVA+CSEE Q +I
Sbjct: 671 HCEKGFEEVLLQFAINIWNQIENSTHFNASQTNKKGVLDVMMKAMKLAVANCSEEKQNII 730
Query: 593 VQKACSVLESSTSFPLKEIISEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKTSV 414
VQK+ ++L SS SFPL+E++ + Q + V + RDE ++SLFA+V IA+ P+T +
Sbjct: 731 VQKSYNILSSSISFPLEELLLQER--FQIAQEVDNSSSRDEWILSLFAAVTIAVHPQTHI 788
Query: 413 TSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGL- 237
+ R ++ F LL+G+V +AQALGSM+NKL + + S+ CTLEEA+DII N L
Sbjct: 789 PNTRSIVSLFMTTLLKGNVVAAQALGSMVNKLDLKSTRGQTSSDCTLEEAMDIILNLSLW 848
Query: 236 ---QSALSSYLLKDTPM-DNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQ 69
++ SS K + D G +Q +AI+GLAWIGKGLLMRGH+
Sbjct: 849 IFDTNSSSSIQSKTISVHDTGLNDLSNGVGSCN----SLQIHAILGLAWIGKGLLMRGHE 904
Query: 68 KLREIVMILLRCLLSTG 18
K+ +I M+ LRCL S+G
Sbjct: 905 KVNDITMVFLRCLQSSG 921
>ref|XP_012451236.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Gossypium raimondii] gi|763801226|gb|KJB68181.1|
hypothetical protein B456_010G230600 [Gossypium
raimondii]
Length = 1104
Score = 457 bits (1175), Expect = e-125
Identities = 269/617 (43%), Positives = 378/617 (61%), Gaps = 6/617 (0%)
Frame = -2
Query: 1850 IFASCQEEPIFSGLSEVDGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKEIDMIL 1671
IF S +F+ S ++G + +NEIA EAL LQK I Q+ L LI GD++I MI
Sbjct: 265 IFISLDSVLLFTPES-LEGPDLPKNEIAAEALSLLQKLIVQNTKLFLDLIVGDEDISMIF 323
Query: 1670 SSIISSKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENS 1491
++I + K+Y+ + E KQ+L+A+G IL T+ K S CN+VF+ FF RL+DILGLS NS
Sbjct: 324 NTISNYKNYHEIPLERKQRLNAVGRILFTTAKASQVSCNRVFECFFSRLMDILGLSARNS 383
Query: 1490 SRGFTSDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYS 1311
S D++ S+ N GALYL +E+L ACR +I S E+ W LL+ +S
Sbjct: 384 SGQPYFDESILISKRCNHGALYLSIEILSACRDMIASSETILAATSHTEETWKYLLQSFS 443
Query: 1310 GSLTNVLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVI 1131
+LT S + S +G T +A + GVKG+ LATFPG ISK +FE+IL + VS+I
Sbjct: 444 PALTMGFCSAFICSSEG-THDAATYIGVKGLLILATFPGGYSLISKTVFEKILVMFVSII 502
Query: 1130 SDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLR 951
++ W++AL AL E+G FIE+ H+SEK YM I +P PLR
Sbjct: 503 NEEYSKRLSWKLALKALGEIGSFIERYHESEKEPSYMDIVVEKILSLAFVGDFGIPFPLR 562
Query: 950 LEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWF 771
LEA+S +G +G+S+ML+V Q LEEAI NL+ +V G+ SAEIV +L+CYS+KV+ W
Sbjct: 563 LEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYVHGSTSSAEIVTHILKCYSDKVIPWV 622
Query: 770 HKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKE-LLGEMVTAMKLAVADCSEETQGLI 594
H E+V +FA IWNQ+E++ FN K+ +L M+ AMKLAVA+CSEE Q +I
Sbjct: 623 HCEKGFEEVLLQFAINIWNQIENSTHFNASQTNKKGVLDVMMKAMKLAVANCSEEKQNII 682
Query: 593 VQKACSVLESSTSFPLKEIISEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKTSV 414
VQK+ ++L SS SFPL+E++ + Q + V + RDE ++SLFA+V IA+ P+T +
Sbjct: 683 VQKSYNILSSSISFPLEELLLQER--FQIAQEVDNSSSRDEWILSLFAAVTIAVHPQTHI 740
Query: 413 TSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNGL- 237
+ R ++ F LL+G+V +AQALGSM+NKL + + S+ CTLEEA+DII N L
Sbjct: 741 PNTRSIVSLFMTTLLKGNVVAAQALGSMVNKLDLKSTRGQTSSDCTLEEAMDIILNLSLW 800
Query: 236 ---QSALSSYLLKDTPM-DNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQ 69
++ SS K + D G +Q +AI+GLAWIGKGLLMRGH+
Sbjct: 801 IFDTNSSSSIQSKTISVHDTGLNDLSNGVGSCN----SLQIHAILGLAWIGKGLLMRGHE 856
Query: 68 KLREIVMILLRCLLSTG 18
K+ +I M+ LRCL S+G
Sbjct: 857 KVNDITMVFLRCLQSSG 873
>gb|KHG04543.1| MMS19 nucleotide excision repair [Gossypium arboreum]
Length = 1134
Score = 453 bits (1166), Expect = e-124
Identities = 269/626 (42%), Positives = 380/626 (60%), Gaps = 18/626 (2%)
Frame = -2
Query: 1841 SCQEEPIFSGLSEV--------DGKKIDENEIAKEALICLQKFIFQDDASVLGLIFGDKE 1686
S +E IF+ L V +G + +NEIA EAL LQK I Q+ L LI GD++
Sbjct: 307 SSLKEAIFTSLDSVLLFTPESLEGSDLPKNEIAAEALSLLQKHIVQNTKLFLDLIVGDED 366
Query: 1685 IDMILSSIISSKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGL 1506
I MI ++I K+Y+ + E KQ+L+A+G + T+ K S CN+VF+ FF +L+DILGL
Sbjct: 367 ISMIFNTISYYKNYHEIPLERKQRLNAVGRVFFTTAKASQVSCNRVFECFFSQLMDILGL 426
Query: 1505 STENSSRGFTSDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCL 1326
S NSS D++ S+ N GALYL +E+L ACR +I S E+ W L
Sbjct: 427 SARNSSGQPYFDESILISKRCNHGALYLSIEILSACRDMIASSETILAATSHTEETWKHL 486
Query: 1325 LKEYSGSLTNVLHSILVTSLKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAI 1146
L+ +S +LT S + S +G T +A + GVKG+ LATFPG ISK +FE+IL
Sbjct: 487 LQSFSPALTMGFCSAFICSSEG-THDAATYIGVKGLLILATFPGGYSLISKTVFEKILVT 545
Query: 1145 LVSVISDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSM 966
VS+I++ W++AL AL E+G FIE+ H+SEK + YM I +
Sbjct: 546 FVSIINEEYSKRLSWKLALKALVEIGSFIERYHESEKESSYMDIVVEKILSLAFVGDFGI 605
Query: 965 PLPLRLEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNK 786
P PLRLEA+S +G +G+S+ML+V Q LEEAI NL+ +V G+ SAEIV LL+CYS+K
Sbjct: 606 PFPLRLEALSDIGTSGRSYMLKVVQGLEEAIYANLYEVYVHGSTNSAEIVTHLLKCYSDK 665
Query: 785 VLSWFHKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKE-LLGEMVTAMKLAVADCSEE 609
V+ W E+V +FA IWNQ+ES+ FN K+ +L M+ AMKLAVA+CSEE
Sbjct: 666 VIPWIRCEKGFEEVLLQFAINIWNQIESSMHFNASQTNKKGVLDVMMKAMKLAVANCSEE 725
Query: 608 TQGLIVQKACSVLESSTSFPLKEIISEPNKVLQSSATVYSLPCRDELVISLFASVIIALR 429
Q +IVQK+ ++L SS SFPL+E++ + Q + V + RDE V+SLFA+V IA+
Sbjct: 726 KQNIIVQKSYNILSSSISFPLEELLLQER--FQIAQEVDNSSSRDEWVLSLFAAVTIAVH 783
Query: 428 PKTSVTSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIF 249
P+T + + R ++ F LL+G+V +AQALGSM+NKL + ++ S+ CTLEEA+DII
Sbjct: 784 PQTHIPNTRSIVSLFMTTLLKGNVVAAQALGSMVNKLDLKSTSGQTSSDCTLEEAMDIIL 843
Query: 248 NNGL-------QSALSSYLLK--DTPMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIG 96
N L S++ S ++ DT +++ C +Q +AI+GLAWIG
Sbjct: 844 NLSLWIFDKNSSSSIQSKMISVHDTALND--------LSNGVGSCTSLQIHAILGLAWIG 895
Query: 95 KGLLMRGHQKLREIVMILLRCLLSTG 18
KGLLMRGH+K+ +I MI L+CL S+G
Sbjct: 896 KGLLMRGHEKVNDITMIFLQCLQSSG 921
>ref|XP_010915313.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Elaeis guineensis]
Length = 1033
Score = 453 bits (1165), Expect = e-124
Identities = 267/612 (43%), Positives = 378/612 (61%), Gaps = 12/612 (1%)
Frame = -2
Query: 1823 IFSGLSEVDGKKIDENEIAKEALICLQKFIFQDDA----SVLGLIFGDKEIDMILSSIIS 1656
+FS + +EN+IAKEALICLQ I D+ +L I D++I+M + +
Sbjct: 202 LFSTSELAGNMESEENQIAKEALICLQTAILHLDSLEKNPILSFIVEDEDIEMKFGLVSN 261
Query: 1655 SKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFT 1476
+ +S ES++ L A+G ILS S K S S C +VFQKFFPRL++IL +S +SS G
Sbjct: 262 EGTGTGISIESRRHLSAVGNILSVSSKASMSGCTRVFQKFFPRLMNILEISASSSSNGCN 321
Query: 1475 SDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTN 1296
+++ T LNFGALYLC++LL + R LI+ S + +PQ ++ +D W C+L+ +SG L +
Sbjct: 322 TNNGTS---SLNFGALYLCIQLLASFRELILTSQDFSPQVITVQDGWWCMLQHFSGPLAH 378
Query: 1295 VLHSILVTS-----LKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVI 1131
L S L+ + + NT Y VKG+Q LATFPGC LP S+ ++E IL I +S+
Sbjct: 379 ALGSALMGARSSELVNNNTGHEHAIYEVKGLQVLATFPGCYLPTSEDVYEYILVIFMSIA 438
Query: 1130 SDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLR 951
++ ED FLW++++ AL E+G FIE+ HDS + + I +MPL L+
Sbjct: 439 TERFEDAFLWKLSVKALIEIGSFIEKYHDSYRGISFNRIVVERIVSLFQQDDSTMPLALK 498
Query: 950 LEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWF 771
L+AIS +G G +M RV ++LEEAI + VEG L++AEI+ PLLECYSN+VL W
Sbjct: 499 LDAISEIGTIGVDYMSRVIKLLEEAILSKFLAVCVEGRLEAAEILVPLLECYSNRVLLWC 558
Query: 770 HKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLIV 591
+ SG+ ++VA +FA IWNQ+ES F+ + ++L M+T MKL V C+EE Q LIV
Sbjct: 559 YTSGNFDEVAMQFALCIWNQMESITIFDKDAKIQDLFDRMMTTMKLLVGGCAEENQSLIV 618
Query: 590 QKACSVLESSTSFPLKEII---SEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKT 420
+KA SVL STSF +E + S + LQ + + +L RDE ++SLFASV+IAL P+T
Sbjct: 619 RKAYSVL-LSTSFLSEESLPFSSSKLEGLQVTPDLVNLSWRDEWIVSLFASVVIALLPQT 677
Query: 419 SVTSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNG 240
+ V+ +L T LL+GH+P+AQAL SM+NK VNI V NA TL+EA+++I
Sbjct: 678 PLPDVKLLLNVLTTFLLKGHLPAAQALASMVNKWHVNIDKSEVPNAYTLDEAIEMILERS 737
Query: 239 LQSALSSYLLKDTPMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLR 60
L S SS L + + N Q+NA+VGLAWIGKGLLMRGH+K++
Sbjct: 738 LLSVQSSSNLGKSDLLN-KDERMLSCLCLLNNNSSFQSNAVVGLAWIGKGLLMRGHEKVK 796
Query: 59 EIVMILLRCLLS 24
EI M+LL+ LLS
Sbjct: 797 EIAMLLLQYLLS 808
>ref|XP_010915290.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Elaeis guineensis] gi|743756137|ref|XP_010915298.1|
PREDICTED: MMS19 nucleotide excision repair protein
homolog isoform X1 [Elaeis guineensis]
gi|743756139|ref|XP_010915305.1| PREDICTED: MMS19
nucleotide excision repair protein homolog isoform X1
[Elaeis guineensis]
Length = 1078
Score = 453 bits (1165), Expect = e-124
Identities = 267/612 (43%), Positives = 378/612 (61%), Gaps = 12/612 (1%)
Frame = -2
Query: 1823 IFSGLSEVDGKKIDENEIAKEALICLQKFIFQDDA----SVLGLIFGDKEIDMILSSIIS 1656
+FS + +EN+IAKEALICLQ I D+ +L I D++I+M + +
Sbjct: 247 LFSTSELAGNMESEENQIAKEALICLQTAILHLDSLEKNPILSFIVEDEDIEMKFGLVSN 306
Query: 1655 SKSYNNMSKESKQKLHALGCILSTSVKVSTSCCNKVFQKFFPRLVDILGLSTENSSRGFT 1476
+ +S ES++ L A+G ILS S K S S C +VFQKFFPRL++IL +S +SS G
Sbjct: 307 EGTGTGISIESRRHLSAVGNILSVSSKASMSGCTRVFQKFFPRLMNILEISASSSSNGCN 366
Query: 1475 SDDTTGFSEELNFGALYLCVELLIACRCLIIGSGECAPQPVSAEDPWCCLLKEYSGSLTN 1296
+++ T LNFGALYLC++LL + R LI+ S + +PQ ++ +D W C+L+ +SG L +
Sbjct: 367 TNNGTS---SLNFGALYLCIQLLASFRELILTSQDFSPQVITVQDGWWCMLQHFSGPLAH 423
Query: 1295 VLHSILVTS-----LKGNTSEACIHYGVKGMQTLATFPGCSLPISKLIFERILAILVSVI 1131
L S L+ + + NT Y VKG+Q LATFPGC LP S+ ++E IL I +S+
Sbjct: 424 ALGSALMGARSSELVNNNTGHEHAIYEVKGLQVLATFPGCYLPTSEDVYEYILVIFMSIA 483
Query: 1130 SDSLEDTFLWRIALNALREVGIFIEQSHDSEKANIYMAIXXXXXXXXXXXXXXSMPLPLR 951
++ ED FLW++++ AL E+G FIE+ HDS + + I +MPL L+
Sbjct: 484 TERFEDAFLWKLSVKALIEIGSFIEKYHDSYRGISFNRIVVERIVSLFQQDDSTMPLALK 543
Query: 950 LEAISVVGAAGKSFMLRVSQVLEEAISKNLFSAFVEGNLQSAEIVGPLLECYSNKVLSWF 771
L+AIS +G G +M RV ++LEEAI + VEG L++AEI+ PLLECYSN+VL W
Sbjct: 544 LDAISEIGTIGVDYMSRVIKLLEEAILSKFLAVCVEGRLEAAEILVPLLECYSNRVLLWC 603
Query: 770 HKSGDVEKVAFRFAFGIWNQVESNKSFNIGDQGKELLGEMVTAMKLAVADCSEETQGLIV 591
+ SG+ ++VA +FA IWNQ+ES F+ + ++L M+T MKL V C+EE Q LIV
Sbjct: 604 YTSGNFDEVAMQFALCIWNQMESITIFDKDAKIQDLFDRMMTTMKLLVGGCAEENQSLIV 663
Query: 590 QKACSVLESSTSFPLKEII---SEPNKVLQSSATVYSLPCRDELVISLFASVIIALRPKT 420
+KA SVL STSF +E + S + LQ + + +L RDE ++SLFASV+IAL P+T
Sbjct: 664 RKAYSVL-LSTSFLSEESLPFSSSKLEGLQVTPDLVNLSWRDEWIVSLFASVVIALLPQT 722
Query: 419 SVTSVREVLKFFTIMLLRGHVPSAQALGSMINKLGVNISNMGVSNACTLEEALDIIFNNG 240
+ V+ +L T LL+GH+P+AQAL SM+NK VNI V NA TL+EA+++I
Sbjct: 723 PLPDVKLLLNVLTTFLLKGHLPAAQALASMVNKWHVNIDKSEVPNAYTLDEAIEMILERS 782
Query: 239 LQSALSSYLLKDTPMDNGXXXXXXXXXXXXXXCIGIQANAIVGLAWIGKGLLMRGHQKLR 60
L S SS L + + N Q+NA+VGLAWIGKGLLMRGH+K++
Sbjct: 783 LLSVQSSSNLGKSDLLN-KDERMLSCLCLLNNNSSFQSNAVVGLAWIGKGLLMRGHEKVK 841
Query: 59 EIVMILLRCLLS 24
EI M+LL+ LLS
Sbjct: 842 EIAMLLLQYLLS 853