BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00023515
         (1172 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010651384.1| PREDICTED: mediator of RNA polymerase II tra...   505   e-140
emb|CBI16537.3| unnamed protein product [Vitis vinifera]              505   e-140
gb|KDO54455.1| hypothetical protein CISIN_1g000163mg [Citrus sin...   504   e-140
ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II tra...   504   e-140
ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citr...   504   e-140
ref|XP_006445589.1| hypothetical protein CICLE_v10014014mg [Citr...   504   e-140
ref|XP_010257656.1| PREDICTED: mediator of RNA polymerase II tra...   504   e-140
ref|XP_007028436.1| RNA polymerase II transcription mediators is...   500   e-139
ref|XP_007028435.1| RNA polymerase II transcription mediators is...   500   e-139
ref|XP_007028434.1| RNA polymerase II transcription mediators is...   500   e-139
ref|XP_012476942.1| PREDICTED: mediator of RNA polymerase II tra...   488   e-135
ref|XP_012476941.1| PREDICTED: mediator of RNA polymerase II tra...   488   e-135
ref|XP_012476943.1| PREDICTED: mediator of RNA polymerase II tra...   488   e-135
gb|KJB26886.1| hypothetical protein B456_004G264800 [Gossypium r...   488   e-135
gb|KJB26885.1| hypothetical protein B456_004G264800 [Gossypium r...   488   e-135
gb|KJB26883.1| hypothetical protein B456_004G264800 [Gossypium r...   488   e-135
gb|KJB26888.1| hypothetical protein B456_004G264800 [Gossypium r...   486   e-134
ref|XP_008223229.1| PREDICTED: mediator of RNA polymerase II tra...   486   e-134
ref|XP_009772435.1| PREDICTED: mediator of RNA polymerase II tra...   482   e-133
ref|XP_009772434.1| PREDICTED: mediator of RNA polymerase II tra...   482   e-133

>ref|XP_010651384.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            [Vitis vinifera]
          Length = 1987

 Score =  505 bits (1301), Expect = e-140
 Identities = 259/392 (66%), Positives = 307/392 (78%), Gaps = 3/392 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLALQEQ RRGFSCGPSMVHAGCGG+LA+ HSLDIAG+EL+DP+SA V+ SSV +L+Q
Sbjct: 951  YGWLALQEQWRRGFSCGPSMVHAGCGGILASCHSLDIAGMELVDPLSADVNASSVFTLIQ 1010

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFG LDGPL+  DWCKGR+QS D    GDG+  +  V E RDS +++T+  
Sbjct: 1011 SDIKNALKSAFGILDGPLSATDWCKGRSQSGDVGTTGDGFSAEHGVNEGRDSSSTVTIGE 1070

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                   DG R+D+  +RR NQE S+ ESEQQ  SRLRPTLFVL
Sbjct: 1071 PISPSQSSAGGSSCIKVSSVT--DGARVDDTCRRRPNQEFSSSESEQQLGSRLRPTLFVL 1128

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            PLPAILVGYQDDWLKTS +SLQLWEKAPLEPYAL KPM Y VICPDI  LTSAAADFF Q
Sbjct: 1129 PLPAILVGYQDDWLKTSANSLQLWEKAPLEPYALQKPMAYYVICPDIDPLTSAAADFFQQ 1188

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LGTVYE+CKLG H+PQ++G QM+  SGKLSSSGFVL+DCPQSMKIES  +S +GSISD+ 
Sbjct: 1189 LGTVYETCKLGTHTPQSLGNQMEVDSGKLSSSGFVLLDCPQSMKIESSNSSLLGSISDFF 1248

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWDL  FLKSLS V+KTL++G     + KEG + P TVIYVVCPFPEP+A+L+T+
Sbjct: 1249 LSLSNGWDLTGFLKSLSKVLKTLKLGSCLATNPKEGISGPCTVIYVVCPFPEPIALLRTV 1308

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSC 4
            +E+S A+GS+ LS +KERRS+ +SQVGKALSC
Sbjct: 1309 IETSVAVGSVILSSDKERRSILQSQVGKALSC 1340


>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
          Length = 1812

 Score =  505 bits (1301), Expect = e-140
 Identities = 259/392 (66%), Positives = 307/392 (78%), Gaps = 3/392 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLALQEQ RRGFSCGPSMVHAGCGG+LA+ HSLDIAG+EL+DP+SA V+ SSV +L+Q
Sbjct: 951  YGWLALQEQWRRGFSCGPSMVHAGCGGILASCHSLDIAGMELVDPLSADVNASSVFTLIQ 1010

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFG LDGPL+  DWCKGR+QS D    GDG+  +  V E RDS +++T+  
Sbjct: 1011 SDIKNALKSAFGILDGPLSATDWCKGRSQSGDVGTTGDGFSAEHGVNEGRDSSSTVTIGE 1070

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                   DG R+D+  +RR NQE S+ ESEQQ  SRLRPTLFVL
Sbjct: 1071 PISPSQSSAGGSSCIKVSSVT--DGARVDDTCRRRPNQEFSSSESEQQLGSRLRPTLFVL 1128

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            PLPAILVGYQDDWLKTS +SLQLWEKAPLEPYAL KPM Y VICPDI  LTSAAADFF Q
Sbjct: 1129 PLPAILVGYQDDWLKTSANSLQLWEKAPLEPYALQKPMAYYVICPDIDPLTSAAADFFQQ 1188

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LGTVYE+CKLG H+PQ++G QM+  SGKLSSSGFVL+DCPQSMKIES  +S +GSISD+ 
Sbjct: 1189 LGTVYETCKLGTHTPQSLGNQMEVDSGKLSSSGFVLLDCPQSMKIESSNSSLLGSISDFF 1248

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWDL  FLKSLS V+KTL++G     + KEG + P TVIYVVCPFPEP+A+L+T+
Sbjct: 1249 LSLSNGWDLTGFLKSLSKVLKTLKLGSCLATNPKEGISGPCTVIYVVCPFPEPIALLRTV 1308

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSC 4
            +E+S A+GS+ LS +KERRS+ +SQVGKALSC
Sbjct: 1309 IETSVAVGSVILSSDKERRSILQSQVGKALSC 1340


>gb|KDO54455.1| hypothetical protein CISIN_1g000163mg [Citrus sinensis]
          Length = 1986

 Score =  504 bits (1299), Expect = e-140
 Identities = 259/392 (66%), Positives = 309/392 (78%), Gaps = 3/392 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLALQE  R+ FSCGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA +H SSVISLLQ
Sbjct: 962  YGWLALQEHWRQEFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADIHASSVISLLQ 1021

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            S+I+ ALKSAFG+LDGPL+V DWCKGR QSVD AA+GDG      + E RDS ++IT+  
Sbjct: 1022 SEIRTALKSAFGSLDGPLSVTDWCKGRGQSVDAAALGDG--STESISECRDSSSTITVG- 1078

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                 +MDGT++DE  QRRLNQ+  + ES+ Q  +RL+PTLFVL
Sbjct: 1079 ---EALSPSQSSGGGSSSLKVAMDGTKLDETGQRRLNQDIGSSESDHQLCARLKPTLFVL 1135

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PAILVGYQDDWLKTS +SLQ WEKAPLEPYALPKP+TY+VICPDI  LTSAAADFF Q
Sbjct: 1136 PSPAILVGYQDDWLKTSATSLQFWEKAPLEPYALPKPITYNVICPDIDPLTSAAADFFQQ 1195

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQN+G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISDY 
Sbjct: 1196 LGAVYETCKLGTHSPQNLGNQMEIDSGKSPSSGFVLLDCPQSMKIESNNASLVGSISDYF 1255

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWDL S+LKSLS  +KT+++G  S+  QKEGN+ P TVIYVVCPFPEP+A+LQT+
Sbjct: 1256 LSLSNGWDLTSYLKSLSKALKTMKLGPCSSTQQKEGNSGPCTVIYVVCPFPEPLAILQTV 1315

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSC 4
            +ESS +LGS+++S ++E R+L  SQVGKALSC
Sbjct: 1316 IESSASLGSVAISSDRE-RALLHSQVGKALSC 1346


>ref|XP_006488934.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            13-like [Citrus sinensis]
          Length = 1966

 Score =  504 bits (1299), Expect = e-140
 Identities = 259/392 (66%), Positives = 309/392 (78%), Gaps = 3/392 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLALQE  R+ FSCGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA +H SSVISLLQ
Sbjct: 942  YGWLALQEHWRQEFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADIHASSVISLLQ 1001

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            S+I+ ALKSAFG+LDGPL+V DWCKGR QSVD AA+GDG      + E RDS ++IT+  
Sbjct: 1002 SEIRTALKSAFGSLDGPLSVTDWCKGRGQSVDAAALGDG--STESISECRDSSSTITVG- 1058

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                 +MDGT++DE  QRRLNQ+  + ES+ Q  +RL+PTLFVL
Sbjct: 1059 ---EALSPSQSSGGGSSSLKVAMDGTKLDETGQRRLNQDIGSSESDHQLCARLKPTLFVL 1115

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PAILVGYQDDWLKTS +SLQ WEKAPLEPYALPKP+TY+VICPDI  LTSAAADFF Q
Sbjct: 1116 PSPAILVGYQDDWLKTSATSLQFWEKAPLEPYALPKPITYNVICPDIDPLTSAAADFFQQ 1175

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQN+G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISDY 
Sbjct: 1176 LGAVYETCKLGTHSPQNLGNQMEIDSGKSPSSGFVLLDCPQSMKIESNNASLVGSISDYF 1235

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWDL S+LKSLS  +KT+++G  S+  QKEGN+ P TVIYVVCPFPEP+A+LQT+
Sbjct: 1236 LSLSNGWDLTSYLKSLSKALKTMKLGPCSSTQQKEGNSGPCTVIYVVCPFPEPLAILQTV 1295

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSC 4
            +ESS +LGS+++S ++E R+L  SQVGKALSC
Sbjct: 1296 IESSASLGSVAISSDRE-RALLHSQVGKALSC 1326


>ref|XP_006445590.1| hypothetical protein CICLE_v10014014mg [Citrus clementina]
            gi|557548201|gb|ESR58830.1| hypothetical protein
            CICLE_v10014014mg [Citrus clementina]
          Length = 1967

 Score =  504 bits (1299), Expect = e-140
 Identities = 259/392 (66%), Positives = 309/392 (78%), Gaps = 3/392 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLALQE  R+ FSCGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA +H SSVISLLQ
Sbjct: 943  YGWLALQEHWRQEFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADIHASSVISLLQ 1002

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            S+I+ ALKSAFG+LDGPL+V DWCKGR QSVD AA+GDG      + E RDS ++IT+  
Sbjct: 1003 SEIRTALKSAFGSLDGPLSVTDWCKGRGQSVDAAALGDG--STESISECRDSSSTITVG- 1059

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                 +MDGT++DE  QRRLNQ+  + ES+ Q  +RL+PTLFVL
Sbjct: 1060 ---EALSPSQSSGGGSSSLKVAMDGTKLDETGQRRLNQDIGSSESDHQLCARLKPTLFVL 1116

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PAILVGYQDDWLKTS +SLQ WEKAPLEPYALPKP+TY+VICPDI  LTSAAADFF Q
Sbjct: 1117 PSPAILVGYQDDWLKTSATSLQFWEKAPLEPYALPKPITYNVICPDIDPLTSAAADFFQQ 1176

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQN+G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISDY 
Sbjct: 1177 LGAVYETCKLGTHSPQNLGNQMEIDSGKSPSSGFVLLDCPQSMKIESNNASLVGSISDYF 1236

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWDL S+LKSLS  +KT+++G  S+  QKEGN+ P TVIYVVCPFPEP+A+LQT+
Sbjct: 1237 LSLSNGWDLTSYLKSLSKALKTMKLGPCSSTQQKEGNSGPCTVIYVVCPFPEPLAILQTV 1296

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSC 4
            +ESS +LGS+++S ++E R+L  SQVGKALSC
Sbjct: 1297 IESSASLGSVAISSDRE-RALLHSQVGKALSC 1327


>ref|XP_006445589.1| hypothetical protein CICLE_v10014014mg [Citrus clementina]
            gi|557548200|gb|ESR58829.1| hypothetical protein
            CICLE_v10014014mg [Citrus clementina]
          Length = 1742

 Score =  504 bits (1299), Expect = e-140
 Identities = 259/392 (66%), Positives = 309/392 (78%), Gaps = 3/392 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLALQE  R+ FSCGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA +H SSVISLLQ
Sbjct: 718  YGWLALQEHWRQEFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADIHASSVISLLQ 777

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            S+I+ ALKSAFG+LDGPL+V DWCKGR QSVD AA+GDG      + E RDS ++IT+  
Sbjct: 778  SEIRTALKSAFGSLDGPLSVTDWCKGRGQSVDAAALGDG--STESISECRDSSSTITVG- 834

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                 +MDGT++DE  QRRLNQ+  + ES+ Q  +RL+PTLFVL
Sbjct: 835  ---EALSPSQSSGGGSSSLKVAMDGTKLDETGQRRLNQDIGSSESDHQLCARLKPTLFVL 891

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PAILVGYQDDWLKTS +SLQ WEKAPLEPYALPKP+TY+VICPDI  LTSAAADFF Q
Sbjct: 892  PSPAILVGYQDDWLKTSATSLQFWEKAPLEPYALPKPITYNVICPDIDPLTSAAADFFQQ 951

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQN+G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISDY 
Sbjct: 952  LGAVYETCKLGTHSPQNLGNQMEIDSGKSPSSGFVLLDCPQSMKIESNNASLVGSISDYF 1011

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWDL S+LKSLS  +KT+++G  S+  QKEGN+ P TVIYVVCPFPEP+A+LQT+
Sbjct: 1012 LSLSNGWDLTSYLKSLSKALKTMKLGPCSSTQQKEGNSGPCTVIYVVCPFPEPLAILQTV 1071

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSC 4
            +ESS +LGS+++S ++E R+L  SQVGKALSC
Sbjct: 1072 IESSASLGSVAISSDRE-RALLHSQVGKALSC 1102


>ref|XP_010257656.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            [Nelumbo nucifera]
          Length = 1972

 Score =  504 bits (1297), Expect = e-140
 Identities = 254/391 (64%), Positives = 310/391 (79%), Gaps = 1/391 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLAL+EQ RRGFSCGPS +HAGCGG+LA+ HSLDIAG+ELLDP+SA+V+ +S++SLLQ
Sbjct: 944  YGWLALEEQRRRGFSCGPSNIHAGCGGILASCHSLDIAGMELLDPLSANVNVASMLSLLQ 1003

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFGNLDGPL+++DWCKGR+QS DT +V +GY+V+S   + +DS +++ +A 
Sbjct: 1004 SDIKTALKSAFGNLDGPLSILDWCKGRSQSSDTGSVANGYLVESTSSDLKDSSSTVAVAA 1063

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQSRLRPTLFVLPL 631
                                 + DG R+DE  QRR NQE    ES+Q  RLRPT  VLPL
Sbjct: 1064 GEPVSPPQSSTVSSAGLKVSSATDGVRVDENFQRRSNQEICGSESDQ--RLRPTPTVLPL 1121

Query: 630  PAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQLG 451
            PAILVGYQDDWLKTS +SLQLWEKAPLEPYALPKPM+Y VICPDI  LTSAAADFF QLG
Sbjct: 1122 PAILVGYQDDWLKTSANSLQLWEKAPLEPYALPKPMSYYVICPDIDPLTSAAADFFQQLG 1181

Query: 450  TVYESCKLGIHSPQNI-GQMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYLLA 274
            TVYE+CKLG H+PQ +  Q +  SG+  SSGFV++DCPQ+MKIES   SF+GSISDYLL+
Sbjct: 1182 TVYEACKLGNHAPQTMESQTELPSGRWLSSGFVIMDCPQTMKIESSNASFVGSISDYLLS 1241

Query: 273  LSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTLVE 94
            LS+GW+L SFLKSLS V+K+L++  +ST+ QKEG   P TVIYVVCP+PEP+AVLQT+VE
Sbjct: 1242 LSNGWELTSFLKSLSKVLKSLKLSSSSTMSQKEGVADPCTVIYVVCPYPEPIAVLQTVVE 1301

Query: 93   SSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            SS A+GSI  + +KERRS+  +QVGKALSCS
Sbjct: 1302 SSAAIGSIIHASDKERRSMLHTQVGKALSCS 1332


>ref|XP_007028436.1| RNA polymerase II transcription mediators isoform 3 [Theobroma cacao]
            gi|508717041|gb|EOY08938.1| RNA polymerase II
            transcription mediators isoform 3 [Theobroma cacao]
          Length = 1605

 Score =  500 bits (1288), Expect = e-139
 Identities = 261/393 (66%), Positives = 300/393 (76%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 571  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 630

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFGNLDGPL+V DWCKGR QS D  A  DG   +S   E RDS  ++T + 
Sbjct: 631  SDIKSALKSAFGNLDGPLSVTDWCKGRGQSGDVGASADGSSAESNTNECRDSSTTVTHSV 690

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                 ++DG +++E SQRRLNQE S  ESEQQ  +RLRPTLFVL
Sbjct: 691  GEAMSPSQTSVGGSSVLKVTGALDGGKVEETSQRRLNQEISGSESEQQQCTRLRPTLFVL 750

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PAILVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSAAADFF Q
Sbjct: 751  PSPAILVGYQDDWLKTSANSLQLWEKAPLEPYALPKPIIYSVICPDIDPLTSAAADFFQQ 810

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LGTVYE+CKLG HSPQ++G QM+  SGK SSSGFVL+DCPQSMKIES   S +GSISDY 
Sbjct: 811  LGTVYETCKLGTHSPQSLGNQMEMDSGKWSSSGFVLLDCPQSMKIESSNASLLGSISDYF 870

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWDL  +LKSLS  +K L++    + +QKEG + P  VIYVVCPFPEP AVL+T+
Sbjct: 871  LSLSNGWDLACYLKSLSKALKALKLSQFLSTNQKEGISGPCMVIYVVCPFPEPTAVLKTV 930

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            VESS A+GSI L  ++ERRS+  SQVGKALS S
Sbjct: 931  VESSIAIGSIILPSDRERRSVLYSQVGKALSSS 963


>ref|XP_007028435.1| RNA polymerase II transcription mediators isoform 2 [Theobroma cacao]
            gi|508717040|gb|EOY08937.1| RNA polymerase II
            transcription mediators isoform 2 [Theobroma cacao]
          Length = 1492

 Score =  500 bits (1288), Expect = e-139
 Identities = 261/393 (66%), Positives = 300/393 (76%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 727  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 786

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFGNLDGPL+V DWCKGR QS D  A  DG   +S   E RDS  ++T + 
Sbjct: 787  SDIKSALKSAFGNLDGPLSVTDWCKGRGQSGDVGASADGSSAESNTNECRDSSTTVTHSV 846

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                 ++DG +++E SQRRLNQE S  ESEQQ  +RLRPTLFVL
Sbjct: 847  GEAMSPSQTSVGGSSVLKVTGALDGGKVEETSQRRLNQEISGSESEQQQCTRLRPTLFVL 906

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PAILVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSAAADFF Q
Sbjct: 907  PSPAILVGYQDDWLKTSANSLQLWEKAPLEPYALPKPIIYSVICPDIDPLTSAAADFFQQ 966

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LGTVYE+CKLG HSPQ++G QM+  SGK SSSGFVL+DCPQSMKIES   S +GSISDY 
Sbjct: 967  LGTVYETCKLGTHSPQSLGNQMEMDSGKWSSSGFVLLDCPQSMKIESSNASLLGSISDYF 1026

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWDL  +LKSLS  +K L++    + +QKEG + P  VIYVVCPFPEP AVL+T+
Sbjct: 1027 LSLSNGWDLACYLKSLSKALKALKLSQFLSTNQKEGISGPCMVIYVVCPFPEPTAVLKTV 1086

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            VESS A+GSI L  ++ERRS+  SQVGKALS S
Sbjct: 1087 VESSIAIGSIILPSDRERRSVLYSQVGKALSSS 1119


>ref|XP_007028434.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
            gi|508717039|gb|EOY08936.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
          Length = 1985

 Score =  500 bits (1288), Expect = e-139
 Identities = 261/393 (66%), Positives = 300/393 (76%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 951  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 1010

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFGNLDGPL+V DWCKGR QS D  A  DG   +S   E RDS  ++T + 
Sbjct: 1011 SDIKSALKSAFGNLDGPLSVTDWCKGRGQSGDVGASADGSSAESNTNECRDSSTTVTHSV 1070

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                 ++DG +++E SQRRLNQE S  ESEQQ  +RLRPTLFVL
Sbjct: 1071 GEAMSPSQTSVGGSSVLKVTGALDGGKVEETSQRRLNQEISGSESEQQQCTRLRPTLFVL 1130

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PAILVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSAAADFF Q
Sbjct: 1131 PSPAILVGYQDDWLKTSANSLQLWEKAPLEPYALPKPIIYSVICPDIDPLTSAAADFFQQ 1190

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LGTVYE+CKLG HSPQ++G QM+  SGK SSSGFVL+DCPQSMKIES   S +GSISDY 
Sbjct: 1191 LGTVYETCKLGTHSPQSLGNQMEMDSGKWSSSGFVLLDCPQSMKIESSNASLLGSISDYF 1250

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWDL  +LKSLS  +K L++    + +QKEG + P  VIYVVCPFPEP AVL+T+
Sbjct: 1251 LSLSNGWDLACYLKSLSKALKALKLSQFLSTNQKEGISGPCMVIYVVCPFPEPTAVLKTV 1310

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            VESS A+GSI L  ++ERRS+  SQVGKALS S
Sbjct: 1311 VESSIAIGSIILPSDRERRSVLYSQVGKALSSS 1343


>ref|XP_012476942.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X2 [Gossypium raimondii]
          Length = 1970

 Score =  488 bits (1257), Expect = e-135
 Identities = 254/393 (64%), Positives = 298/393 (75%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 943  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 1002

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFG+LDGPL+V DWC+GR QS D  A  DG   +S + E RDS +++TL+ 
Sbjct: 1003 SDIKSALKSAFGSLDGPLSVTDWCRGRGQSGDVGASADGSSTESNISECRDSSSTVTLS- 1061

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQET--SNLESEQQSRLRPTLFVL 637
                                   DG ++DE SQRRLNQET  S LE +Q SRLR TLFVL
Sbjct: 1062 ----VGEAVSPSQTSVGGSSYLKDGGKVDETSQRRLNQETSGSELEQQQSSRLRSTLFVL 1117

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PA+LVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSAAADFF Q
Sbjct: 1118 PSPALLVGYQDDWLKTSGNSLQLWEKAPLEPYALPKPINYSVICPDIDPLTSAAADFFQQ 1177

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQ++G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISD+ 
Sbjct: 1178 LGIVYETCKLGTHSPQSLGNQMEIDSGKWFSSGFVLLDCPQSMKIESSNASLLGSISDFF 1237

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWD+  +LKSLS  +K L+IG     +QKEG + P  VIYVVCPFPEP AVL+T+
Sbjct: 1238 LSLSNGWDMTCYLKSLSKALKALKIGQFLFTNQKEGISSPCLVIYVVCPFPEPTAVLKTV 1297

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            +ESS A+GSI L  ++++RSL  SQ+GKALS S
Sbjct: 1298 IESSIAVGSIILPSDRDKRSLLHSQIGKALSSS 1330


>ref|XP_012476941.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X1 [Gossypium raimondii]
          Length = 1973

 Score =  488 bits (1257), Expect = e-135
 Identities = 254/393 (64%), Positives = 298/393 (75%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 946  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 1005

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFG+LDGPL+V DWC+GR QS D  A  DG   +S + E RDS +++TL+ 
Sbjct: 1006 SDIKSALKSAFGSLDGPLSVTDWCRGRGQSGDVGASADGSSTESNISECRDSSSTVTLS- 1064

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQET--SNLESEQQSRLRPTLFVL 637
                                   DG ++DE SQRRLNQET  S LE +Q SRLR TLFVL
Sbjct: 1065 ----VGEAVSPSQTSVGGSSYLKDGGKVDETSQRRLNQETSGSELEQQQSSRLRSTLFVL 1120

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PA+LVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSAAADFF Q
Sbjct: 1121 PSPALLVGYQDDWLKTSGNSLQLWEKAPLEPYALPKPINYSVICPDIDPLTSAAADFFQQ 1180

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQ++G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISD+ 
Sbjct: 1181 LGIVYETCKLGTHSPQSLGNQMEIDSGKWFSSGFVLLDCPQSMKIESSNASLLGSISDFF 1240

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWD+  +LKSLS  +K L+IG     +QKEG + P  VIYVVCPFPEP AVL+T+
Sbjct: 1241 LSLSNGWDMTCYLKSLSKALKALKIGQFLFTNQKEGISSPCLVIYVVCPFPEPTAVLKTV 1300

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            +ESS A+GSI L  ++++RSL  SQ+GKALS S
Sbjct: 1301 IESSIAVGSIILPSDRDKRSLLHSQIGKALSSS 1333


>ref|XP_012476943.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X3 [Gossypium raimondii]
            gi|763759556|gb|KJB26887.1| hypothetical protein
            B456_004G264800 [Gossypium raimondii]
          Length = 1946

 Score =  488 bits (1257), Expect = e-135
 Identities = 254/393 (64%), Positives = 298/393 (75%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 919  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 978

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFG+LDGPL+V DWC+GR QS D  A  DG   +S + E RDS +++TL+ 
Sbjct: 979  SDIKSALKSAFGSLDGPLSVTDWCRGRGQSGDVGASADGSSTESNISECRDSSSTVTLS- 1037

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQET--SNLESEQQSRLRPTLFVL 637
                                   DG ++DE SQRRLNQET  S LE +Q SRLR TLFVL
Sbjct: 1038 ----VGEAVSPSQTSVGGSSYLKDGGKVDETSQRRLNQETSGSELEQQQSSRLRSTLFVL 1093

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PA+LVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSAAADFF Q
Sbjct: 1094 PSPALLVGYQDDWLKTSGNSLQLWEKAPLEPYALPKPINYSVICPDIDPLTSAAADFFQQ 1153

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQ++G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISD+ 
Sbjct: 1154 LGIVYETCKLGTHSPQSLGNQMEIDSGKWFSSGFVLLDCPQSMKIESSNASLLGSISDFF 1213

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWD+  +LKSLS  +K L+IG     +QKEG + P  VIYVVCPFPEP AVL+T+
Sbjct: 1214 LSLSNGWDMTCYLKSLSKALKALKIGQFLFTNQKEGISSPCLVIYVVCPFPEPTAVLKTV 1273

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            +ESS A+GSI L  ++++RSL  SQ+GKALS S
Sbjct: 1274 IESSIAVGSIILPSDRDKRSLLHSQIGKALSSS 1306


>gb|KJB26886.1| hypothetical protein B456_004G264800 [Gossypium raimondii]
          Length = 1943

 Score =  488 bits (1257), Expect = e-135
 Identities = 254/393 (64%), Positives = 298/393 (75%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 916  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 975

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFG+LDGPL+V DWC+GR QS D  A  DG   +S + E RDS +++TL+ 
Sbjct: 976  SDIKSALKSAFGSLDGPLSVTDWCRGRGQSGDVGASADGSSTESNISECRDSSSTVTLS- 1034

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQET--SNLESEQQSRLRPTLFVL 637
                                   DG ++DE SQRRLNQET  S LE +Q SRLR TLFVL
Sbjct: 1035 ----VGEAVSPSQTSVGGSSYLKDGGKVDETSQRRLNQETSGSELEQQQSSRLRSTLFVL 1090

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PA+LVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSAAADFF Q
Sbjct: 1091 PSPALLVGYQDDWLKTSGNSLQLWEKAPLEPYALPKPINYSVICPDIDPLTSAAADFFQQ 1150

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQ++G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISD+ 
Sbjct: 1151 LGIVYETCKLGTHSPQSLGNQMEIDSGKWFSSGFVLLDCPQSMKIESSNASLLGSISDFF 1210

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWD+  +LKSLS  +K L+IG     +QKEG + P  VIYVVCPFPEP AVL+T+
Sbjct: 1211 LSLSNGWDMTCYLKSLSKALKALKIGQFLFTNQKEGISSPCLVIYVVCPFPEPTAVLKTV 1270

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            +ESS A+GSI L  ++++RSL  SQ+GKALS S
Sbjct: 1271 IESSIAVGSIILPSDRDKRSLLHSQIGKALSSS 1303


>gb|KJB26885.1| hypothetical protein B456_004G264800 [Gossypium raimondii]
          Length = 1801

 Score =  488 bits (1257), Expect = e-135
 Identities = 254/393 (64%), Positives = 298/393 (75%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 774  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 833

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFG+LDGPL+V DWC+GR QS D  A  DG   +S + E RDS +++TL+ 
Sbjct: 834  SDIKSALKSAFGSLDGPLSVTDWCRGRGQSGDVGASADGSSTESNISECRDSSSTVTLS- 892

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQET--SNLESEQQSRLRPTLFVL 637
                                   DG ++DE SQRRLNQET  S LE +Q SRLR TLFVL
Sbjct: 893  ----VGEAVSPSQTSVGGSSYLKDGGKVDETSQRRLNQETSGSELEQQQSSRLRSTLFVL 948

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PA+LVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSAAADFF Q
Sbjct: 949  PSPALLVGYQDDWLKTSGNSLQLWEKAPLEPYALPKPINYSVICPDIDPLTSAAADFFQQ 1008

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQ++G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISD+ 
Sbjct: 1009 LGIVYETCKLGTHSPQSLGNQMEIDSGKWFSSGFVLLDCPQSMKIESSNASLLGSISDFF 1068

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWD+  +LKSLS  +K L+IG     +QKEG + P  VIYVVCPFPEP AVL+T+
Sbjct: 1069 LSLSNGWDMTCYLKSLSKALKALKIGQFLFTNQKEGISSPCLVIYVVCPFPEPTAVLKTV 1128

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            +ESS A+GSI L  ++++RSL  SQ+GKALS S
Sbjct: 1129 IESSIAVGSIILPSDRDKRSLLHSQIGKALSSS 1161


>gb|KJB26883.1| hypothetical protein B456_004G264800 [Gossypium raimondii]
            gi|763759553|gb|KJB26884.1| hypothetical protein
            B456_004G264800 [Gossypium raimondii]
          Length = 1505

 Score =  488 bits (1257), Expect = e-135
 Identities = 254/393 (64%), Positives = 298/393 (75%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 478  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 537

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFG+LDGPL+V DWC+GR QS D  A  DG   +S + E RDS +++TL+ 
Sbjct: 538  SDIKSALKSAFGSLDGPLSVTDWCRGRGQSGDVGASADGSSTESNISECRDSSSTVTLS- 596

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQET--SNLESEQQSRLRPTLFVL 637
                                   DG ++DE SQRRLNQET  S LE +Q SRLR TLFVL
Sbjct: 597  ----VGEAVSPSQTSVGGSSYLKDGGKVDETSQRRLNQETSGSELEQQQSSRLRSTLFVL 652

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            P PA+LVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSAAADFF Q
Sbjct: 653  PSPALLVGYQDDWLKTSGNSLQLWEKAPLEPYALPKPINYSVICPDIDPLTSAAADFFQQ 712

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LG VYE+CKLG HSPQ++G QM+  SGK  SSGFVL+DCPQSMKIES   S +GSISD+ 
Sbjct: 713  LGIVYETCKLGTHSPQSLGNQMEIDSGKWFSSGFVLLDCPQSMKIESSNASLLGSISDFF 772

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L+LS+GWD+  +LKSLS  +K L+IG     +QKEG + P  VIYVVCPFPEP AVL+T+
Sbjct: 773  LSLSNGWDMTCYLKSLSKALKALKIGQFLFTNQKEGISSPCLVIYVVCPFPEPTAVLKTV 832

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            +ESS A+GSI L  ++++RSL  SQ+GKALS S
Sbjct: 833  IESSIAVGSIILPSDRDKRSLLHSQIGKALSSS 865


>gb|KJB26888.1| hypothetical protein B456_004G264800 [Gossypium raimondii]
          Length = 1599

 Score =  486 bits (1252), Expect = e-134
 Identities = 254/400 (63%), Positives = 300/400 (75%), Gaps = 10/400 (2%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            Y WLALQE  RRGF CGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA++H SSVISLL 
Sbjct: 895  YSWLALQEHWRRGFCCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSANIHASSVISLLH 954

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLA- 814
            SDIK ALKSAFG+LDGPL+V DWC+GR QS D  A  DG   +S + E RDS +++TL+ 
Sbjct: 955  SDIKSALKSAFGSLDGPLSVTDWCRGRGQSGDVGASADGSSTESNISECRDSSSTVTLSV 1014

Query: 813  ------XXXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQET--SNLESEQQSRL 658
                                        ++DG ++DE SQRRLNQET  S LE +Q SRL
Sbjct: 1015 GEAVSPSQTSVGGSSYLKGVFLIDAMAVAIDGGKVDETSQRRLNQETSGSELEQQQSSRL 1074

Query: 657  RPTLFVLPLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSA 478
            R TLFVLP PA+LVGYQDDWLKTS +SLQLWEKAPLEPYALPKP+ YSVICPDI  LTSA
Sbjct: 1075 RSTLFVLPSPALLVGYQDDWLKTSGNSLQLWEKAPLEPYALPKPINYSVICPDIDPLTSA 1134

Query: 477  AADFFLQLGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFM 301
            AADFF QLG VYE+CKLG HSPQ++G QM+  SGK  SSGFVL+DCPQSMKIES   S +
Sbjct: 1135 AADFFQQLGIVYETCKLGTHSPQSLGNQMEIDSGKWFSSGFVLLDCPQSMKIESSNASLL 1194

Query: 300  GSISDYLLALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEP 121
            GSISD+ L+LS+GWD+  +LKSLS  +K L+IG     +QKEG + P  VIYVVCPFPEP
Sbjct: 1195 GSISDFFLSLSNGWDMTCYLKSLSKALKALKIGQFLFTNQKEGISSPCLVIYVVCPFPEP 1254

Query: 120  VAVLQTLVESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
             AVL+T++ESS A+GSI L  ++++RSL  SQ+GKALS S
Sbjct: 1255 TAVLKTVIESSIAVGSIILPSDRDKRSLLHSQIGKALSSS 1294


>ref|XP_008223229.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            [Prunus mume]
          Length = 1960

 Score =  486 bits (1251), Expect = e-134
 Identities = 249/393 (63%), Positives = 298/393 (75%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLALQEQ R+GFSCGPSMVHAGCGG LA+ HSLDIAGVEL+DP+SA VH SSVISLLQ
Sbjct: 937  YGWLALQEQWRKGFSCGPSMVHAGCGGTLASCHSLDIAGVELVDPLSADVHASSVISLLQ 996

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVGEARDSINSITLAX 811
            SDIK ALKSAFG LDGPL V DWC+GR QS ++    DGY  +S + E +DS + +  + 
Sbjct: 997  SDIKTALKSAFGILDGPLPVTDWCRGRNQSGESTV--DGYSAESTISECKDSSSIVAPSI 1054

Query: 810  XXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLFVL 637
                                 +MDG ++DE SQRR NQE    ES+ Q  SRLRPTLFV+
Sbjct: 1055 VEPLSPSPSCSAGSTCLKVSSAMDGAKVDETSQRRSNQENCTSESDLQMSSRLRPTLFVI 1114

Query: 636  PLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFFLQ 457
            PLPAILVGYQDDWLK S SSLQLWEKAPLEPYAL KP+TY V+CPDI  LTSAAADFF Q
Sbjct: 1115 PLPAILVGYQDDWLKASASSLQLWEKAPLEPYALQKPITYYVVCPDIDPLTSAAADFFQQ 1174

Query: 456  LGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISDYL 280
            LGTVYE+CKLG H PQ+ G QM+  SG+  SSGFVL+DCPQ+MKIES   S +GS+SDY 
Sbjct: 1175 LGTVYETCKLGTHLPQSSGSQMEVDSGRRPSSGFVLLDCPQAMKIESRNASLVGSLSDYF 1234

Query: 279  LALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQTL 100
            L++S+GWDL S+LKSLS  +K L++G   + + KEG++ P+TVIYVVCPFPEP+A+LQT+
Sbjct: 1235 LSISNGWDLTSYLKSLSKALKALKLGHCLSTNAKEGSSGPSTVIYVVCPFPEPIAILQTV 1294

Query: 99   VESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            +ESS A+GS+    ++ERRS+  SQV KALS S
Sbjct: 1295 IESSVAIGSVIFQSDRERRSILYSQVSKALSYS 1327


>ref|XP_009772435.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X3 [Nicotiana sylvestris]
          Length = 1930

 Score =  482 bits (1240), Expect = e-133
 Identities = 250/395 (63%), Positives = 302/395 (76%), Gaps = 5/395 (1%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLALQEQ RRGFSCGPSMVHAGCGG+LA+ HSLDIAGVEL+DP+SA V  S  ++LLQ
Sbjct: 925  YGWLALQEQWRRGFSCGPSMVHAGCGGVLASCHSLDIAGVELIDPLSADVQASFTLTLLQ 984

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVG--EARDSINSITL 817
            +DIK A+KSAFG ++GPL+V+DWCKGR+QS D    GDG+  +S     E RDS ++I+ 
Sbjct: 985  NDIKTAMKSAFGTMEGPLSVVDWCKGRSQSNDGGISGDGFSAESTASASECRDSSSTISF 1044

Query: 816  AXXXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLF 643
            +                        DG R+DE S+RRL+Q+T   ESEQ   SRLRPTL 
Sbjct: 1045 SVGEPISPSQSSAGGSSLK------DGIRVDEASERRLSQDTCLSESEQLPGSRLRPTLS 1098

Query: 642  VLPLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFF 463
             +P PAILVGYQDDWLKTS SSLQLWEKAP EPYA+PK M+Y V+CPDI  LT+AA DFF
Sbjct: 1099 AVPYPAILVGYQDDWLKTSPSSLQLWEKAPFEPYAMPKHMSYYVVCPDINALTTAATDFF 1158

Query: 462  LQLGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISD 286
             QLGTVYE+CKLG HSPQ +G +M+  SGK  SSGFVLIDCPQSMKI+S  TS +GSISD
Sbjct: 1159 QQLGTVYETCKLGTHSPQCMGNEMEIDSGKNVSSGFVLIDCPQSMKIDSSSTSMLGSISD 1218

Query: 285  YLLALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQ 106
            Y L+LS+GWDL+S+LKSLS V++ L++    T++ KEG+T P TVIYVVCPFPEP+AVLQ
Sbjct: 1219 YFLSLSNGWDLESYLKSLSKVLRNLKLSSCMTMNPKEGSTGPCTVIYVVCPFPEPLAVLQ 1278

Query: 105  TLVESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            T+VESS A+GS+ LS +KERRS  ++QVGKALS S
Sbjct: 1279 TVVESSIAVGSVVLSSDKERRSTLQNQVGKALSYS 1313


>ref|XP_009772434.1| PREDICTED: mediator of RNA polymerase II transcription subunit 13
            isoform X2 [Nicotiana sylvestris]
          Length = 1930

 Score =  482 bits (1240), Expect = e-133
 Identities = 250/395 (63%), Positives = 302/395 (76%), Gaps = 5/395 (1%)
 Frame = -3

Query: 1170 YGWLALQEQCRRGFSCGPSMVHAGCGGLLATGHSLDIAGVELLDPISASVHPSSVISLLQ 991
            YGWLALQEQ RRGFSCGPSMVHAGCGG+LA+ HSLDIAGVEL+DP+SA V  S  ++LLQ
Sbjct: 925  YGWLALQEQWRRGFSCGPSMVHAGCGGVLASCHSLDIAGVELIDPLSADVQASFTLTLLQ 984

Query: 990  SDIKVALKSAFGNLDGPLTVMDWCKGRTQSVDTAAVGDGYIVDSVVG--EARDSINSITL 817
            +DIK A+KSAFG ++GPL+V+DWCKGR+QS D    GDG+  +S     E RDS ++I+ 
Sbjct: 985  NDIKTAMKSAFGTMEGPLSVVDWCKGRSQSNDGGISGDGFSAESTASASECRDSSSTISF 1044

Query: 816  AXXXXXXXXXXXXXXXXXXXXXXSMDGTRMDEGSQRRLNQETSNLESEQQ--SRLRPTLF 643
            +                        DG R+DE S+RRL+Q+T   ESEQ   SRLRPTL 
Sbjct: 1045 SVGEPISPSQSSAGGSSLK------DGIRVDEASERRLSQDTCLSESEQLPGSRLRPTLS 1098

Query: 642  VLPLPAILVGYQDDWLKTSTSSLQLWEKAPLEPYALPKPMTYSVICPDIGFLTSAAADFF 463
             +P PAILVGYQDDWLKTS SSLQLWEKAP EPYA+PK M+Y V+CPDI  LT+AA DFF
Sbjct: 1099 AVPYPAILVGYQDDWLKTSPSSLQLWEKAPFEPYAMPKHMSYYVVCPDINALTTAATDFF 1158

Query: 462  LQLGTVYESCKLGIHSPQNIG-QMDSGSGKLSSSGFVLIDCPQSMKIESGGTSFMGSISD 286
             QLGTVYE+CKLG HSPQ +G +M+  SGK  SSGFVLIDCPQSMKI+S  TS +GSISD
Sbjct: 1159 QQLGTVYETCKLGTHSPQCMGNEMEIDSGKNVSSGFVLIDCPQSMKIDSSSTSMLGSISD 1218

Query: 285  YLLALSSGWDLKSFLKSLSDVIKTLRIGLNSTIHQKEGNTCPTTVIYVVCPFPEPVAVLQ 106
            Y L+LS+GWDL+S+LKSLS V++ L++    T++ KEG+T P TVIYVVCPFPEP+AVLQ
Sbjct: 1219 YFLSLSNGWDLESYLKSLSKVLRNLKLSSCMTMNPKEGSTGPCTVIYVVCPFPEPLAVLQ 1278

Query: 105  TLVESSTALGSISLSLEKERRSLFRSQVGKALSCS 1
            T+VESS A+GS+ LS +KERRS  ++QVGKALS S
Sbjct: 1279 TVVESSIAVGSVVLSSDKERRSTLQNQVGKALSYS 1313