BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00020377
         (1296 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009140200.1| PREDICTED: putative ribonuclease H protein A...   106   6e-32
ref|XP_013654240.1| PREDICTED: uncharacterized protein LOC106359...    85   1e-30
ref|XP_013654532.1| PREDICTED: uncharacterized protein LOC106359...    88   1e-29
ref|XP_013679355.1| PREDICTED: uncharacterized protein LOC106383...    82   2e-28
ref|XP_009113005.1| PREDICTED: uncharacterized protein LOC103838...    85   2e-28
ref|XP_013607693.1| PREDICTED: uncharacterized protein LOC106314...    88   3e-28
ref|XP_008359109.1| PREDICTED: putative ribonuclease H protein A...    87   5e-28
ref|XP_009118875.1| PREDICTED: uncharacterized protein LOC103843...    87   8e-28
ref|XP_009103763.1| PREDICTED: uncharacterized protein LOC103829...    87   8e-28
ref|XP_009142123.1| PREDICTED: putative ribonuclease H protein A...    85   2e-27
ref|XP_013710782.1| PREDICTED: uncharacterized protein LOC106414...    89   4e-27
ref|XP_009132673.1| PREDICTED: putative ribonuclease H protein A...    87   8e-27
ref|XP_009113011.1| PREDICTED: putative ribonuclease H protein A...    89   1e-26
ref|XP_008353155.1| PREDICTED: putative ribonuclease H protein A...    84   1e-26
ref|XP_008369650.1| PREDICTED: putative ribonuclease H protein A...    76   1e-26
ref|XP_009141427.1| PREDICTED: putative ribonuclease H protein A...    92   2e-26
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    90   3e-26
ref|XP_008346916.1| PREDICTED: putative ribonuclease H protein A...    77   3e-26
ref|XP_013601015.1| PREDICTED: uncharacterized protein LOC106308...    84   4e-26
ref|XP_013645686.1| PREDICTED: uncharacterized protein LOC106350...    87   4e-26

>ref|XP_009140200.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 1086

 Score =  106 bits (264), Expect(2) = 6e-32
 Identities = 54/158 (34%), Positives = 92/158 (58%), Gaps = 4/158 (2%)
 Frame = -2

Query: 1292 DSNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTW-VS 1116
            +S+ W+ ++  R++ ++N  W +G+G +I++W+DPW+ +    RP         + W V 
Sbjct: 653  ESHGWRGVLIGRDLMMSNAGWALGNGESINIWSDPWLSHSEQARPMG-PAPEQFIHWTVK 711

Query: 1115 QLFVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKL 936
            +L +     WN +++ ++FP ++A I+S    P   ++ D+LIWL T SG++TTKS Y  
Sbjct: 712  KLMLPNGTDWNREIIQQVFPHEEARILS--LKPSKTDVADKLIWLGTTSGEYTTKSGYLK 769

Query: 935  ---LSDNNPTTSSLAEFPWKKFWKQVQSLPKIKNFVWK 831
               L+D NP   +  E  WKK    +Q+ PKIK F+WK
Sbjct: 770  ALELNDTNPIPPTTVEVDWKKGIWNLQTAPKIKLFLWK 807



 Score = 60.8 bits (146), Expect(2) = 6e-32
 Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 1/120 (0%)
 Frame = -3

Query: 853  RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
            ++++   K+    + V   L+  NI     C LC+S  ESI HL   C FA  V++ +P 
Sbjct: 800  KIKLFLWKIFKGALPVGEALAVRNIGSAQTCALCDS-NESINHLFLHCDFAYNVWRLAPF 858

Query: 673  MIEVQGESVMDIIGHWLTYPDQGIMLN-LGVCLMWNIWKARSELVFNNNHTAVGSCIHKA 497
               +    ++D+   WL     GI L  L   ++W +W AR++ +FNN  T     I KA
Sbjct: 859  STCIDARGLLDLSTAWLGL--LGISLGPLAPWILWALWLARNDRIFNNKGTTPEEVITKA 916


>ref|XP_013654240.1| PREDICTED: uncharacterized protein LOC106359020 [Brassica napus]
          Length = 2394

 Score = 84.7 bits (208), Expect(2) = 1e-30
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 11/165 (6%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQL 1110
            S+ W+ ++  R++ V N  W +G+G +I VW+ PW+      RP       +    VS L
Sbjct: 532  SHGWRGILIGRDLLVQNIGWAVGNGTSIKVWSHPWLSLRQQERPMGPATEESAEWTVSDL 591

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCY---- 942
            F+   R WN   + +L P ++ +I++    P      D+ IWL T +G++TTK+ Y    
Sbjct: 592  FLPDSREWNRQKIQQLLPNEEEKILT--IKPSLLGAPDRQIWLSTDTGEYTTKTGYYAAL 649

Query: 941  ---KLLS----DNNPTTSSLAEFPWKKFWKQVQSLPKIKNFVWKS 828
                LL     D+NP       F WKK    + + PK+K F+WK+
Sbjct: 650  RSRNLLQEAPHDDNP-------FDWKKEVWNIDTAPKVKMFLWKT 687



 Score = 78.2 bits (191), Expect(2) = 1e-30
 Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 8/252 (3%)
 Frame = -3

Query: 853  RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
            ++++   K     + V  NL+  NI I   C  C    ES  HLLFQC +A +V+  +P 
Sbjct: 679  KVKMFLWKTFKGALSVGTNLAARNIPIDPRCKRCGE-PESTYHLLFQCSYAQQVWSLAPY 737

Query: 673  MIEVQGESVMDIIGHW------LTYPDQGI-MLNLGVCLMWNIWKARSELVFNNNHTAVG 515
            M  ++   ++D+   W      LT P  GI    L   ++W++W AR+ +VFNN H A  
Sbjct: 738  MGAIETSGLLDLEQTWRSTCNNLTLPPVGISTTQLTPWILWHLWLARNNVVFNNRHVAPQ 797

Query: 514  SCIHKALEDFKSFDLHHALNFCSEIQVNQNIIAHWEPPPPTFVKINVDATYNNAK-GXXX 338
              + KA+   + +      N   E + +++++   EP       + +DA +N+       
Sbjct: 798  DTLTKAMVAAREW----TTNQVRETKTSRSLLRQ-EPTAAGTSLVQIDAAWNSTTFNVGL 852

Query: 337  XXXVDSFGYHLGCGSFCFDTFSAAVADAKAYGFGVHLAKRLQLSRIIVEGDASEVPKAVT 158
               +   G      SF     S  VA+  A    +       ++R+  E D +++ KA+T
Sbjct: 853  GWVIKKGGETTSSTSFSRFVGSPLVAEGMAIRAALLNCIDAGITRVRCESDCTQLVKALT 912

Query: 157  GNTNEIPWNGSI 122
             ++  +   G +
Sbjct: 913  ASSGSMEIYGIV 924


>ref|XP_013654532.1| PREDICTED: uncharacterized protein LOC106359365 [Brassica napus]
          Length = 1233

 Score = 87.8 bits (216), Expect(2) = 1e-29
 Identities = 44/158 (27%), Positives = 83/158 (52%), Gaps = 4/158 (2%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQL 1110
            S+ W+ +++ R++ ++N  W +G+G +I++W+ PW+      RP     A      VS L
Sbjct: 794  SHGWRGVLSGRDVIMSNASWEVGNGESINIWDKPWLSCTAPERPMGPAPADYQNLTVSDL 853

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLLS 930
             +     WN++++  + P ++ +I++    P      D+L W+ + SG +TTK+ Y    
Sbjct: 854  LLPDSGTWNLEMIQLVLPFEETKILA--LKPSRTGAPDKLSWMGSKSGNYTTKTGYATAL 911

Query: 929  DNNPTTSSLAE----FPWKKFWKQVQSLPKIKNFVWKS 828
             N P    +++    F W+K    ++S PK K FVWK+
Sbjct: 912  TNRPGHRLISQEDLSFDWRKAVWNLKSSPKTKLFVWKA 949



 Score = 71.6 bits (174), Expect(2) = 1e-29
 Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 9/237 (3%)
 Frame = -3

Query: 832  KVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPIMIEVQGE 653
            K LH  I     L    I++  +C  CN + E+I HL F C FA +V+ ++P++  ++  
Sbjct: 948  KALHGAIPAGEALRARQINVDGLCKRCN-LPETIDHLFFHCAFAKQVWYSAPVLPSIEYN 1006

Query: 652  SVMDIIGHWL------TYPDQGIMLN-LGVCLMWNIWKARSELVFNNNHTAVGSCIHKAL 494
              + +   W+        P  G+    L   ++WNIW AR+ LVFN    +    + KA+
Sbjct: 1007 DSIALRSLWIDLTMRKNLPPSGVAGGPLAPWILWNIWTARNNLVFNGKAQSAAETLSKAI 1066

Query: 493  EDFKSFDLHHALNFCSEIQVNQNIIAHWEPPPPTFVKINVDATYNNAKGXXXXXXVDSFG 314
               + + +  AL      + N  +       P     I  DA +N A+       +    
Sbjct: 1067 SLAREWGVCQALPSVQTAKTNPPVTT-----PTNCYLIKTDAAWNEAQQIAGLSWIVESQ 1121

Query: 313  YHLGCGSFCFDTFSAAV-ADAKAYGFGVHLAKRLQLSRIIVEGDASEVPKAV-TGNT 149
              +   S      S  + A+A A    +   K L ++RI  E D++ + KA+ TG++
Sbjct: 1122 NRVSSYSVSAHHVSTPLAAEALALREALEKCKELGIARIRCESDSAVLIKALKTGSS 1178


>ref|XP_013679355.1| PREDICTED: uncharacterized protein LOC106383849 [Brassica napus]
          Length = 841

 Score = 82.4 bits (202), Expect(2) = 2e-28
 Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
 Frame = -2

Query: 1292 DSNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHV-TWVS 1116
            +S+ W+ ++  R++ + N  W +G G  I  W+DPW+      RP   H    H+   V 
Sbjct: 403  ESHGWRGVLLGRDLLLRNMGWTVGDGKQIKAWSDPWLSTSCQARPMG-HPMERHIDITVE 461

Query: 1115 QLFVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKS---- 948
            +LF  G   WN +++  +FP +   I++    P      D+L W+ T  G++TTKS    
Sbjct: 462  ELFHDGTTEWNQEVIQLIFPFEAETILT--IKPSILGAPDKLFWVHTRDGEYTTKSGYVA 519

Query: 947  --CYKLLSDNNPTTSSLAEFPWKKFWKQVQSLPKIKNFVWKS 828
               YK   D  P  + L +  W K    +++ PKI+  VWK+
Sbjct: 520  AVAYKNEQDERPQMAHLID--WNKGVWNLKTAPKIQLLVWKA 559



 Score = 72.8 bits (177), Expect(2) = 2e-28
 Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 11/246 (4%)
 Frame = -3

Query: 853  RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
            ++++   K L   + V   L    I++  +C  C  +E SI HLLFQC+FA  V+ ++P 
Sbjct: 551  KIQLLVWKALRGALPVGEKLLARQINVDPMCKRCGKLE-SINHLLFQCEFAETVWNSAPF 609

Query: 673  MIEVQGESVMDIIGHWL------TYPDQGIML-NLGVCLMWNIWKARSELVFNNNHTAVG 515
               +    ++D+   W+        P  GI+   L   ++WN+W AR++++FN+      
Sbjct: 610  AHRIDRRQLLDLENDWMRLIENPCLPPVGIVSGQLAPWIVWNLWTARNKMIFNDKGFTAE 669

Query: 514  SCIHKALEDFKSFDLHHALNFCSEIQVNQNIIAHWEPPPPTF---VKINVDATYN-NAKG 347
              + +A+          A  + +     +  + H +P        V +  DA +N  +K 
Sbjct: 670  EVVTQAVA--------AAREWLNAQNKEEKRVTHPKPSRTALAWEVVVQTDAAWNATSKS 721

Query: 346  XXXXXXVDSFGYHLGCGSFCFDTFSAAVADAKAYGFGVHLAKRLQLSRIIVEGDASEVPK 167
                  V + G +    +      S  VA+  A    V + K L L  I  E D+S++ K
Sbjct: 722  AGLGWSVKNIGRNSEFQATAELVVSPLVAEGLAMRNAVKMCKELGLRHIRYESDSSQLIK 781

Query: 166  AVTGNT 149
            A+   T
Sbjct: 782  ALNSKT 787


>ref|XP_009113005.1| PREDICTED: uncharacterized protein LOC103838323 [Brassica rapa]
          Length = 491

 Score = 84.7 bits (208), Expect(2) = 2e-28
 Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQL 1110
            S+ W+ ++  R++ + N  W +G G +I++W DPW+      RP  L +  +    V+ L
Sbjct: 51   SHGWRSILIGRDLLLKNMGWTVGDGVSINIWQDPWLCLNKQERPMGLPSEQSVDLCVADL 110

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLLS 930
             V G + W+   L  L P  + +I+     P     QD+LIWL T  G+++ KS Y +  
Sbjct: 111  LVDGGKHWDRQKLQLLLPAYEEKIL--CIKPSLTGAQDKLIWLGTKGGEYSVKSGYYVAV 168

Query: 929  DNNP-TTSSLAEFPWKKFWKQVQSLPKIKNFVWK 831
            +  P T  + A F WK+    +   PK+K F WK
Sbjct: 169  EEEPDTRRNDAGFNWKRNVWALDCAPKVKLFAWK 202



 Score = 70.5 bits (171), Expect(2) = 2e-28
 Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
 Frame = -3

Query: 853 RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
           ++++   K+L   I V   L + +I +   C  C +  ESI HLLFQCQFA +V+Q +P+
Sbjct: 195 KVKLFAWKLLKGAIPVGERLLERHIEVDPRCKKCGN-NESITHLLFQCQFAQKVWQLAPL 253

Query: 673 MIEVQGESVMDIIGHWLTYPDQGIMLNLGVC-------LMWNIWKARSELVF 539
           +  +    ++D++  W +  +Q  +L  G+        +MW++WKAR+ LVF
Sbjct: 254 LPGMDSSGMLDLMVVWPSICNQKSLLPAGIVNGSVVPWVMWSLWKARNRLVF 305


>ref|XP_013607693.1| PREDICTED: uncharacterized protein LOC106314358 [Brassica oleracea
            var. oleracea]
          Length = 738

 Score = 87.8 bits (216), Expect(2) = 3e-28
 Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQL 1110
            S+ W+ ++T R+I ++N  W +G+G +I++W+ PW+      RP            VS L
Sbjct: 299  SHGWRGVLTGRDIIMSNASWEVGNGESINIWDKPWLNCDGQERPMGPAPLEFQNLTVSDL 358

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLLS 930
             +   R WN+D++  + P ++++I++    P      D+L WL + SG +TTK+ Y    
Sbjct: 359  LLPDHRTWNIDMIKLVLPFEESKILA--IKPSITGAPDKLTWLGSKSGNYTTKTGYVSAL 416

Query: 929  DNNPTTSSLAE----FPWKKFWKQVQSLPKIKNFVWK 831
             N  +   ++     F WKK    +++ PK K F WK
Sbjct: 417  SNRTSPMDISHEDLAFEWKKMVWNLKTSPKTKLFAWK 453



 Score = 66.6 bits (161), Expect(2) = 3e-28
 Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 18/249 (7%)
 Frame = -3

Query: 853  RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
            + ++   KVLH  I     L    I++   C  CN + E+I HL F C FA +V+ ++P+
Sbjct: 446  KTKLFAWKVLHRAIPAGEALRARQINVDGKCKRCN-LPETIDHLFFHCTFAKQVWLSAPV 504

Query: 673  MIEVQGESVMDIIGHWLTYPDQGIMLNLGVC-------LMWNIWKARSELVFNNNHTAVG 515
             + ++    + +   W     +  +  +GV        ++W+IW AR+ LVFN       
Sbjct: 505  FLSIEYNESIVLRSLWCDLTTRKNLPPMGVTEGQLAPWILWSIWTARNNLVFNGKPQPAD 564

Query: 514  SCIHKAL---EDFKSFDL-----HHALNFCSEIQVNQNIIAHWEPPPPTFVKINVDATYN 359
              + KA+    ++ SF +     +H LN                P PP       DA +N
Sbjct: 565  ETLPKAIALAREWGSFQVTPPPKNHKLNPPG-------------PTPPNCFLTKTDAAWN 611

Query: 358  NAK---GXXXXXXVDSFGYHLGCGSFCFDTFSAAVADAKAYGFGVHLAKRLQLSRIIVEG 188
              +   G        S   H    +      S  VA+A A    +   + L LSRI  E 
Sbjct: 612  EDQKIAGLGWTVESQSRVSHYSIPA--HHVRSPLVAEALALRESLGKCRELGLSRIRCES 669

Query: 187  DASEVPKAV 161
            D++ + KA+
Sbjct: 670  DSAILIKAL 678


>ref|XP_008359109.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 422

 Score = 86.7 bits (213), Expect(2) = 5e-28
 Identities = 57/159 (35%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
 Frame = -2

Query: 1280 WKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVT---WVSQL 1110
            W  ++  R+I +N   W I +G  I VW D W+P LP  RP+  H  S HV+    V  L
Sbjct: 104  WSSLLKGRDILLNGAHWQIMNGKEIKVWGDRWVPALPLGRPT--HLGSVHVSRNLRVESL 161

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLLS 930
                 R+W++D L       + E I  ++I  D    D+LIW     G+F+ KS Y    
Sbjct: 162  INPVTRVWDVDFLKPFLEQPELEAILDLHI-GDSSRSDRLIWPFEKKGKFSVKSGYHWAI 220

Query: 929  DN--NPTTSSLAEFPWKKFWKQVQSL---PKIKNFVWKS 828
            D   +P   SL+  P   FWK V SL   PKI++F+WK+
Sbjct: 221  DRYLSPPNCSLSLIP-TCFWKLVWSLKTPPKIRSFMWKT 258



 Score = 67.4 bits (163), Expect(2) = 5e-28
 Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 12/175 (6%)
 Frame = -3

Query: 853 RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
           ++R    K LH  +    NL++       +CP+C   EE+I H+  QC + S +++    
Sbjct: 250 KIRSFMWKTLHGALATMENLAQRRSAQSPLCPICQLQEETIEHIFLQCPWVSVIWRGGCF 309

Query: 673 MIEVQGESVMDIIGHWLTYPDQGI---------MLNLGVCLMWNIWKARSELVFNNNHTA 521
            + V G S      HWL      +         M +      WNIWK+R  L+FNN+   
Sbjct: 310 SLRV-GISATVSWAHWLLQVFTSVKGLKDVSLKMFSYIAFTCWNIWKSRCNLLFNNHQIN 368

Query: 520 VGSCIHKALEDFKSFDLHHALNFCSEIQVNQN---IIAHWEPPPPTFVKINVDAT 365
               I  +     S+   H L    E    Q+   +   W PP    VKINVDA+
Sbjct: 369 PRQVIFASSLSASSYTAAH-LALSPEPSTGQHESRVGIRWSPPNMGSVKINVDAS 422


>ref|XP_009118875.1| PREDICTED: uncharacterized protein LOC103843847 [Brassica rapa]
          Length = 1319

 Score = 87.4 bits (215), Expect(2) = 8e-28
 Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWI-----PNLPGFRPSRLHNASTHVT 1125
            S+ W+ ++  R+I ++N  W +G+G +I++W  PW+      +  G  P +  N +    
Sbjct: 881  SHGWRGVLIGRDIVMSNASWEVGNGESINIWTKPWLSCEVQESPMGPAPLQYLNLT---- 936

Query: 1124 WVSQLFVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSC 945
             VS  F+   R WN+D++  + P+++ +I++    P      D+L WL   SG +TTKS 
Sbjct: 937  -VSDFFLPNSREWNVDMIRLVLPMEEQKILA--IKPSVTGAPDKLSWLGAKSGSYTTKSG 993

Query: 944  Y--KLLSDNNPTTSSLAE--FPWKKFWKQVQSLPKIKNFVWKS 828
            Y   L +  +P  +S+A+  F WKK    +++ PK K FVWK+
Sbjct: 994  YATALSTRTDPMDTSIADQSFDWKKAVWTLKTSPKTKLFVWKA 1036



 Score = 65.9 bits (159), Expect(2) = 8e-28
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
 Frame = -3

Query: 832  KVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPIMIEVQGE 653
            K LH  I     L    I++   C  CN + E+I HL F C FA +V+ ++P+   ++  
Sbjct: 1035 KALHGAIPAGEALRARQINVDGKCKRCN-LPETIDHLFFHCPFAKQVWTSAPVFPSIEYN 1093

Query: 652  SVMDIIGHWLTY------PDQGIMLNLGVCLMWNIWKARSELVFNNNHTAVGSCIHKAL 494
              + +   W+        P  G+   L   ++W IW AR+ LVFN+  T+    + KA+
Sbjct: 1094 GSIVLRNQWINLISRKNLPPTGVEGQLAPWILWGIWTARNNLVFNDKLTSATETLSKAI 1152


>ref|XP_009103763.1| PREDICTED: uncharacterized protein LOC103829818 [Brassica rapa]
          Length = 1304

 Score = 87.4 bits (215), Expect(2) = 8e-28
 Identities = 51/163 (31%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWI-----PNLPGFRPSRLHNASTHVT 1125
            S+ W+ ++  R+I ++N  W +G+G +I++W  PW+      +  G  P +  N +    
Sbjct: 881  SHGWRGVLIGRDIVMSNASWEVGNGESINIWTKPWLSCEVQESPMGPAPLQYLNLT---- 936

Query: 1124 WVSQLFVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSC 945
             VS  F+   R WN+D++  + P+++ +I++    P      D+L WL   SG +TTKS 
Sbjct: 937  -VSDFFLPNSREWNVDMIRLVLPMEEQKILA--IKPSVTGAPDKLSWLGAKSGSYTTKSG 993

Query: 944  Y--KLLSDNNPTTSSLAE--FPWKKFWKQVQSLPKIKNFVWKS 828
            Y   L +  +P  +S+A+  F WKK    +++ PK K FVWK+
Sbjct: 994  YATALSTRTDPMDTSIADQSFDWKKAVWTLKTSPKTKLFVWKA 1036



 Score = 65.9 bits (159), Expect(2) = 8e-28
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
 Frame = -3

Query: 832  KVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPIMIEVQGE 653
            K LH  I     L    I++   C  CN + E+I HL F C FA +V+ ++P+   ++  
Sbjct: 1035 KALHGAIPAGEALRARQINVDGKCKRCN-LPETIDHLFFHCPFAKQVWTSAPVFPSIEYN 1093

Query: 652  SVMDIIGHWLTY------PDQGIMLNLGVCLMWNIWKARSELVFNNNHTAVGSCIHKAL 494
              + +   W+        P  G+   L   ++W IW AR+ LVFN+  T+    + KA+
Sbjct: 1094 GSIVLRNQWINLISRKNLPPTGVEGQLAPWILWGIWTARNNLVFNDKLTSATETLSKAI 1152


>ref|XP_009142123.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 774

 Score = 84.7 bits (208), Expect(2) = 2e-27
 Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQL 1110
            S+ W+ ++  R++ + N  W +G G++I++W DPW+      RP    +  +    V+ L
Sbjct: 335  SHGWRSVLIGRDLLLKNLGWTVGDGSSINIWQDPWLCLTKQERPMGPSSEQSVDLCVADL 394

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLLS 930
             V G + W+   L  L P  + +I+     P     QD+LIWL T  G+++ KS Y +  
Sbjct: 395  LVDGGKHWDRQKLQLLLPAYEEKIL--CIKPSLTGAQDKLIWLGTKGGEYSVKSGYYVAV 452

Query: 929  DNNP-TTSSLAEFPWKKFWKQVQSLPKIKNFVWK 831
            +  P T  + A F WK+    +   PK+K F WK
Sbjct: 453  EEEPDTRRNDAGFNWKRNVWALDCAPKVKLFAWK 486



 Score = 67.4 bits (163), Expect(2) = 2e-27
 Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
 Frame = -3

Query: 853 RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
           ++++   K+L   I V   L + +I +   C  C    ESI HLLFQCQFA +V+Q +P+
Sbjct: 479 KVKLFAWKLLKGAIPVGERLLERHIEVDPRCKRCGD-NESITHLLFQCQFAQKVWQLAPL 537

Query: 673 MIEVQGESVMDIIGHWLTYPDQGIMLNLGVC-------LMWNIWKARSELVF 539
           +  +    ++D++  W +  +Q  +   G+        +MW++WKAR+ LVF
Sbjct: 538 LPGMDSSGMLDLMVVWPSICNQKSLPPAGIVNGSVVPWVMWSLWKARNRLVF 589


>ref|XP_013710782.1| PREDICTED: uncharacterized protein LOC106414721 [Brassica napus]
          Length = 1320

 Score = 88.6 bits (218), Expect(2) = 4e-27
 Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQL 1110
            S+ W+ ++  R+I +N+  W +G+G++I++W  PW+      RP            VS L
Sbjct: 881  SHGWRGILIGRDIIINSAGWEVGNGSSINIWEKPWLSCSTQLRPMGPPPRDFSQLTVSDL 940

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYK-LL 933
             +  +  W++D++  + P ++  I++    P      D+L WL T +G ++TK+ YK +L
Sbjct: 941  MLPDRNEWDIDMIQRVLPFEEQRILA--IKPSLTGAPDKLSWLSTDTGDYSTKTGYKAVL 998

Query: 932  SDNNPTTSSLAE---FPWKKFWKQVQSLPKIKNFVWKS 828
            S  +   +   E   F WKK   ++Q+ PKIK F+WK+
Sbjct: 999  SSRSVEDAGSFEDGSFDWKKSVWKLQTTPKIKLFIWKA 1036



 Score = 62.4 bits (150), Expect(2) = 4e-27
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
 Frame = -3

Query: 853  RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
            ++++   K LH  + V   L    I+    C  CN + ESI HLLF C +A +V++++P+
Sbjct: 1028 KIKLFIWKALHGALPVSEALKARGINTDGQCKRCN-MPESIDHLLFHCAYARQVWESAPV 1086

Query: 673  MIEVQGESVMDIIGHWLTY------PDQGIMLN-LGVCLMWNIWKARSELVFNNNHTAVG 515
               ++    +D+   W ++      P  G+    L   + W +W AR++LVF      V 
Sbjct: 1087 SPSIEYSGSIDLRSSWSSFCSRKNLPPTGVSTGALAPWITWQLWLARNKLVFEGKIITVE 1146

Query: 514  SCIHKA 497
              I +A
Sbjct: 1147 ESISRA 1152


>ref|XP_009132673.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 824

 Score = 87.0 bits (214), Expect(2) = 8e-27
 Identities = 42/157 (26%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQL 1110
            S+ W+ +M  R++   N  W +G+G ++++W  PW+      RP      +   T V++L
Sbjct: 385  SHGWRGIMVGRDLIAENSGWAVGNGESLNIWESPWLSLTAQERPMGPAPEALVNTTVAEL 444

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLL- 933
            F+  +  WN++L+ ++ P ++ +I  +   P      D+L+W+ + +G++TTK+ Y +  
Sbjct: 445  FLPEKNEWNLELIRQILPFEEHKI--RTLKPSLTGAPDKLMWVHSVTGEYTTKTGYAVAI 502

Query: 932  ---SDNNPTTSSLAEFPWKKFWKQVQSLPKIKNFVWK 831
               +D       + +F W+K    + + PKIK F+WK
Sbjct: 503  PKHTDFTHIPQGILDFNWRKSVWNLHTAPKIKLFIWK 539



 Score = 62.8 bits (151), Expect(2) = 8e-27
 Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 17/251 (6%)
 Frame = -3

Query: 853  RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
            ++++   K+ H  + V   L    I++   C +C  + E+I HL   C FA +V+   P+
Sbjct: 532  KIKLFIWKIFHRALPVGEILRARQINVDGRCKICG-LPETIDHLFLHCSFAKQVWNLVPV 590

Query: 673  MIEVQGESVMDIIGHW------LTYPDQGIML-NLGVCLMWNIWKARSELVFNNNHTAVG 515
               ++     ++   W         P  GI   +L   ++W +WKAR+ L+FN+   +V 
Sbjct: 591  WPSIEYSGTAELQSEWNHLMARQALPPTGIAAGSLAPWILWQLWKARNSLLFNDKGLSVR 650

Query: 514  SCIHKALEDFKSFDLHHALNFCSEIQVNQNIIAHWEPPPPTFVKINVDATYNNAK----- 350
              I  A+   + ++    L+          +      P    V +  DA +N A      
Sbjct: 651  EVISVAIAAAREWNQSQELDSTKRTLPKPRV-----TPQEESVVVRSDAAWNEANKVAGL 705

Query: 349  GXXXXXXVDSFGY-----HLGCGSFCFDTFSAAVADAKAYGFGVHLAKRLQLSRIIVEGD 185
            G        S  Y     ++G         S  VA+  A    +   + L L R+  E D
Sbjct: 706  GWIIRSRNKSSSYSEPARYVG---------SPLVAEGLALREAILRCRDLGLPRLRCESD 756

Query: 184  ASEVPKAVTGN 152
             +++ KA+T +
Sbjct: 757  CAQLIKALTSD 767


>ref|XP_009113011.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 682

 Score = 88.6 bits (218), Expect(2) = 1e-26
 Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQL 1110
            S+ W+ +M  R++ V N  W +G+G  ++VW  PW+      RP      +     V+ L
Sbjct: 267  SHGWRGIMVGRDLIVENSGWAVGNGECLNVWESPWLSLTAQERPMGPAPEALVNLSVADL 326

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLL- 933
            F+  +R WN+DL+ ++ P ++ +I  ++  P      D+L+WL + SG++TTK+ Y    
Sbjct: 327  FLPEKREWNLDLIQQVLPFEEHKI--RMLKPSLMGAPDKLMWLLSESGEYTTKTGYAATI 384

Query: 932  ---SDNNPTTSSLAEFPWKKFWKQVQSLPKIKNFVWK 831
               +D       + +F W+K    + + PKIK F+WK
Sbjct: 385  PKHTDITLIPQEILDFNWRKSVWNLHTAPKIKLFIWK 421



 Score = 60.8 bits (146), Expect(2) = 1e-26
 Identities = 58/247 (23%), Positives = 95/247 (38%), Gaps = 13/247 (5%)
 Frame = -3

Query: 853  RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
            ++++   K+ H  + V   L    I +   C LC  + E+I HL   C FA  V+   P+
Sbjct: 414  KIKLFIWKLFHRALPVGEQLRARQIKVDGKCKLCG-LPETIDHLFLHCSFAKRVWALVPV 472

Query: 673  MIEVQGESVMDIIGHWL------TYPDQGIML-NLGVCLMWNIWKARSELVFNNNHTAVG 515
               ++     ++   W+        P  GI   +L   ++W +WKAR+ LVFN+      
Sbjct: 473  WPSIEFAGTAELRSEWICMLTRQALPPTGIATGSLAPWILWQLWKARNSLVFNDKGFNAT 532

Query: 514  SCIHKALEDFKSFDLHHALNFCSEIQVNQNIIAHWEPP-----PPTFVKINVDATYNNAK 350
              I  A    + ++   A          Q +     PP     P   V +  DA +N AK
Sbjct: 533  EVITLASAAAREWNQSQA----------QTLTKQKHPPVRASLPEDCVVVRSDAAWNEAK 582

Query: 349  GXXXXXXVDSFGYHLGCGSF-CFDTFSAAVADAKAYGFGVHLAKRLQLSRIIVEGDASEV 173
                   +          S       S  VA+  A    V   + L L R+  E D +++
Sbjct: 583  KVAGLGWIIKSQNRASVFSEPARFVGSPLVAEGMALREAVLKCRDLGLPRLRCESDCAQL 642

Query: 172  PKAVTGN 152
             KA+T +
Sbjct: 643  IKALTSD 649


>ref|XP_008353155.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 637

 Score = 83.6 bits (205), Expect(2) = 1e-26
 Identities = 68/254 (26%), Positives = 104/254 (40%), Gaps = 14/254 (5%)
 Frame = -3

Query: 853  RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
            ++R    + L E +    NL         +CP+CN  EES++HL  QC +  EV+    +
Sbjct: 317  KIRSFXWRSLQEAVATXVNLFMRRSSSSTLCPICNRYEESLVHLFLQCSWVEEVWIGXRL 376

Query: 673  MIEVQGESVM-------DIIGHWLTYPDQGI---MLNLGVCLMWNIWKARSELVFNNNHT 524
            +  ++ ++V         I+G  L     G+   ML+      W IWKAR   +FN    
Sbjct: 377  IRGLRRDAVTSWAXWLGSIVG--LANGQSGVRNDMLSYVATTCWFIWKARCXFLFNQQPI 434

Query: 523  AVGSCIHKALEDFKSFDLHHALNFCS-EIQVN-QNIIAHWEPPPPTFVKINVDATY--NN 356
                 I    +   +F  +     CS  I VN       W PP   F+KINVDA++  + 
Sbjct: 435  VPRQIIAVIXQSVAAFKEYXQATVCSLPISVNGLXSDVQWSPPCVGFIKINVDASWLRSG 494

Query: 355  AKGXXXXXXVDSFGYHLGCGSFCFDTFSAAVADAKAYGFGVHLAKRLQLSRIIVEGDASE 176
            A G       D  G  +          S AVA+A A   G  L + +  + +IVE D+ E
Sbjct: 495  APGFVGVVARDDEGRFMAAIRRRVTASSVAVAEALAVLHGCELGRSMGWNFVIVESDSQE 554

Query: 175  VPKAVTGNTNEIPW 134
                +  +     W
Sbjct: 555  SISCIRDSDTRGSW 568



 Score = 65.9 bits (159), Expect(2) = 1e-26
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
 Frame = -2

Query: 1280 WKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTW-VSQLFV 1104
            W  ++  R I      W I +G ++ VW D W+P++P   PS L +    +   V+ L  
Sbjct: 168  WSSLLVGREIIRGGAHWQIMNGKDVRVWVDKWLPSIPSGHPSPLGSVPVSLNLRVNSLLS 227

Query: 1103 QGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLLSD- 927
                 W +D L      ++ + I + +   D    D+L+W    +G ++ KS Y      
Sbjct: 228  TDYGSWEIDFLKPFLVEEEIKAIYETH-SGDPSSNDRLVWPFVKNGIYSVKSGYHWAMTR 286

Query: 926  ------NNPTTSSL-AEFPWKKFWKQVQSLPKIKNFVWKS 828
                   NP  S+L  +  WK  WK ++  PKI++F W+S
Sbjct: 287  NIQQRIGNPHRSALIPKQVWKCVWK-LEVQPKIRSFXWRS 325


>ref|XP_008369650.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 587

 Score = 75.9 bits (185), Expect(2) = 1e-26
 Identities = 55/159 (34%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
 Frame = -2

Query: 1280 WKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVT---WVSQL 1110
            W  ++  R+I +N   W I +G  I VW D W+P LP  RP+ L   S HV+    V  L
Sbjct: 104  WSSLLKGRDILLNGAHWQIMNGKEIKVWGDRWVPALPLGRPTPL--GSVHVSRXLRVESL 161

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLLS 930
                  +W++D L         E I  ++I  D    D+LIW     G+F+ KS Y    
Sbjct: 162  INXVTGVWDVDFLKPFLEQPXLEAILDLHI-GDSSRSDRLIWXFEKKGKFSVKSGYHWAI 220

Query: 929  DN--NPTTSSLAEFPWKKFWKQVQSL---PKIKNFVWKS 828
            D   +P  SSL+  P   F K V SL    KI +F+WK+
Sbjct: 221  DRYLSPPNSSLSLIP-XCFXKLVXSLKTPXKIXSFLWKT 258



 Score = 73.2 bits (178), Expect(2) = 1e-26
 Identities = 64/233 (27%), Positives = 90/233 (38%), Gaps = 14/233 (6%)
 Frame = -3

Query: 832 KVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPIMIEVQGE 653
           K LH  +    NL++       +CP+C   EE+I HL  QC + S ++      + V G 
Sbjct: 257 KTLHGALATMENLARRRSAXSXLCPICQLQEETIZHLFLQCPWVSAIWXGGCFSLRV-GI 315

Query: 652 SVMDIIGHWLTYPDQGIMLNLGVCL---------MWNIWKARSELVFNNNHTAVGSCIHK 500
           S      HWL      +  +  V L          W+IWK R  L+FNN+          
Sbjct: 316 SAXVSWAHWLLQVFTSVKGSKEVSLKMFSYIXFTCWBIWKXRCNLLFNNHQIDPXXVXFA 375

Query: 499 ALEDFKSFDLHHALNFCSEIQVNQN---IIAHWEPPPPTFVKINVDATYN--NAKGXXXX 335
           +     S+   H L    E    Q+   +   W PP    VKINVDA++N  +  G    
Sbjct: 376 SSLSXSSYTXAH-LALXPEPSTGQHESGVGIRWSPPNMGXVKINVDASWNLRSKSGFIGV 434

Query: 334 XXVDSFGYHLGCGSFCFDTFSAAVADAKAYGFGVHLAKRLQLSRIIVEGDASE 176
                 G  L    +     SA +  A A   G    K    S +I E D+ E
Sbjct: 435 VXRGEEGRFLXXERYSGKASSADMMXALAILNGCXFGKSRGXSSVIXESDSLE 487


>ref|XP_009141427.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 554

 Score = 92.0 bits (227), Expect(2) = 2e-26
 Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
 Frame = -2

Query: 1292 DSNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWI----PNLP-GFRPSRLHNASTHV 1128
            +S+ WK ++  R++ + N  W +G G +I VW DPW+    P  P G  P R  N     
Sbjct: 115  ESHGWKGILIGRDLILQNAGWAVGDGESISVWADPWLSLSAPRRPMGPTPERFANLK--- 171

Query: 1127 TWVSQLFVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKS 948
              V  L +     WN DL+ ++ P ++A I+S           D+LIWL T SG++TTKS
Sbjct: 172  --VKDLMLPNGSDWNRDLIQQIMPQEEATILS--IKASRSGTPDKLIWLGTTSGEYTTKS 227

Query: 947  CYKLLSDNNPTT-SSLAEFPWKKFWKQVQSLPKIKNFVWK 831
             Y    +++PT+        W K   Q++  PKIK F+WK
Sbjct: 228  GYLKAMESSPTSPPPNRAIDWNKGVWQLEVAPKIKLFLWK 267



 Score = 56.2 bits (134), Expect(2) = 2e-26
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
 Frame = -3

Query: 853 RLRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPI 674
           ++++   K+    + +   L   NI     C  CN+VE SI HL   C  A +V++ +P 
Sbjct: 260 KIKLFLWKIFQGALAIGDRLVTRNISTGTSCKTCNNVE-SINHLFLHCDIAYKVWKLAPF 318

Query: 673 MIEVQGESVMDIIGHW------LTYPDQGIMLN-LGVCLMWNIWKARSELVFNNNHTAVG 515
              +    ++D+   W      +  P  GI    L  C++W++W AR+  +FNN  +   
Sbjct: 319 SSCIDSRRLLDLNTAWQGLSKLVCLPPTGISTGPLAPCILWSLWLARNNRLFNNKISTPE 378

Query: 514 SCIHKA 497
             + +A
Sbjct: 379 EIVSRA 384


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 89.7 bits (221), Expect(2) = 3e-26
 Identities = 52/151 (34%), Positives = 78/151 (51%)
 Frame = -2

Query: 1280 WKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQLFVQ 1101
            WK+++  RN F     W IG G +I  W D WI   P      +    +    V++ F  
Sbjct: 924  WKNLLRHRNFFSKGLRWLIGDGQDISFWTDNWIFQYP-LNSKYVPTVGSENIKVAECF-N 981

Query: 1100 GQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLLSDNN 921
            G   W++  LL L P +  + IS ++IP   + QD+L+W  TP+GQ++ KS   L+ + N
Sbjct: 982  GLGGWDIPKLLTLVPPNIVKAISSVFIPSSSQ-QDRLLWGLTPTGQYSVKSGASLIREVN 1040

Query: 920  PTTSSLAEFPWKKFWKQVQSLPKIKNFVWKS 828
              T    EF W   W  + + PKIKNF+WK+
Sbjct: 1041 GGTIEKVEFNW--IW-GIHAPPKIKNFLWKA 1068



 Score = 58.2 bits (139), Expect(2) = 3e-26
 Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 35/268 (13%)
 Frame = -3

Query: 832  KVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPIMIEVQGE 653
            K  ++G+   + L + +I +   C  C+   E+I HL FQC F  ++Y            
Sbjct: 1067 KACNDGLATTSRLERSHIFVPQNCCFCDCPSETICHLCFQCPFTLDIY------------ 1114

Query: 652  SVMDIIGHWLTYPD--------------QGIMLNLGV-------CLMWNIWKARSELVFN 536
            S ++    W  YP               +   +NL +        + W++W  R++L+FN
Sbjct: 1115 SHLEDKFQWPAYPSWFSTLQLSSFRSVLEACHINLTLEYLTKLSIVWWHVWYFRNKLIFN 1174

Query: 535  NNHTAVGSC---IH-------KALEDFKSFDLHHALNFCSEIQVNQNIIAHWEPPPPTFV 386
            N  T+       IH       KA  +  SF+     +    ++  +N+I  W PP    +
Sbjct: 1175 NESTSFSQASFIIHSFMGKWEKANLEIPSFNTPLPKDCKLPVRSGKNLI--WSPPNEDVL 1232

Query: 385  KINVDAT-YNNAKGXXXXXXVDSFGYHLGCGSFCFDTF-SAAVADAKAYGFGVHLAKRLQ 212
            K+N D +  +N +        +S G  L   +     + S  +A+A     G+  A  LQ
Sbjct: 1233 KVNFDGSKLDNGQAAYGFVIRNSNGEVLMARAKALGVYPSILMAEAMGLLEGIKGAISLQ 1292

Query: 211  --LSRIIVEGDASEVPKAVTGNTNEIPW 134
                +II EGD   V  A++ +    PW
Sbjct: 1293 NWSRKIIFEGDNIAVINAMSPSATG-PW 1319


>ref|XP_008346916.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 1007

 Score = 77.0 bits (188), Expect(2) = 3e-26
 Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 16/244 (6%)
 Frame = -3

Query: 826  LHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPIMIEVQGESV 647
            LH  +    NL K       +CP+C   +ES +H+   C +   V+    +  +V G ++
Sbjct: 679  LHNALATKVNLFKRGASNSPICPICLCDDESTVHIFLLCPWVKHVWFGGVLSYKVDGXAI 738

Query: 646  MD-------IIGHWLTYPDQGIMLNLGVCL-MWNIWKARSELVFNNNH---TAVGSCIHK 500
                     I       PD G+ +   V    W IWKAR + VFN      + V   I  
Sbjct: 739  SSWFLWLQAIFSSNFGAPDDGMWVRSCVAFTCWFIWKARCDFVFNXVKIIPSRVVXAISS 798

Query: 499  ALEDFKSFDLHHALNFCS---EIQVNQNIIAHWEPPPPTFVKINVDATY--NNAKGXXXX 335
            A++ F +     +   C     +      +  W PP P F KINVDA++   +  G    
Sbjct: 799  AMDSFLA--AGRSXEVCGLRXGVGQASXPVVCWTPPDPPFSKINVDASWCRMSLVGFVGV 856

Query: 334  XXVDSFGYHLGCGSFCFDTFSAAVADAKAYGFGVHLAKRLQLSRIIVEGDASEVPKAVTG 155
                + G  +    +     +AA A+A A   G  L   L LS +I+E D+ E    ++ 
Sbjct: 857  VVRSAEGQFIAAARYSIKASNAAAAEALALLHGCKLGVTLGLSEVIIESDSLEAVSCLSN 916

Query: 154  NTNE 143
            +  +
Sbjct: 917  SLED 920



 Score = 70.9 bits (172), Expect(2) = 3e-26
 Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
 Frame = -2

Query: 1280 WKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHN-ASTHVTWVSQLFV 1104
            W  +++ R++ +    W I  G ++ VW D W+P+L    P  L   A T    V +LF 
Sbjct: 521  WSSLLSGRDVILQGTHWQILGGEDVRVWVDRWLPSLLLGHPVPLGXVAVTRNLRVCKLFC 580

Query: 1103 QGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLLSDN 924
               R W+++ L       + E I    I  D   +D+LIW  + +G+++ KS Y+ +   
Sbjct: 581  PLSREWDLNFLQPFXTDVEXETIRATPI-GDSSRRDRLIWAASKNGRYSVKSGYRWIQSR 639

Query: 923  N--------PTTSSLAEFPWKKFWKQVQSLPKIKNFVWKS 828
            +        P   S+ E  WK  WK ++  PKI++F+W S
Sbjct: 640  SLCLRDSRLPHARSVPEELWKCLWK-IEVPPKIRHFLWSS 678


>ref|XP_013601015.1| PREDICTED: uncharacterized protein LOC106308403 [Brassica oleracea
            var. oleracea] gi|923920408|ref|XP_013729497.1|
            PREDICTED: uncharacterized protein LOC106433196 [Brassica
            napus]
          Length = 1182

 Score = 84.0 bits (206), Expect(2) = 4e-26
 Identities = 42/158 (26%), Positives = 86/158 (54%), Gaps = 5/158 (3%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRP-SRLHNASTHVTWVSQ 1113
            S+ W+ +M  R++   N  W +G+G ++++W  PW+      RP      A  ++T V++
Sbjct: 743  SHGWRGIMVGRDLIAENSGWAVGNGESLNIWESPWLSLTAQERPIGPAPEALVNIT-VAE 801

Query: 1112 LFVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYKLL 933
            LF+  +  WN++L+ ++ P ++ +I  ++  P      D+L+W+ + +G++TTK+ Y + 
Sbjct: 802  LFLPEKNEWNLELIRQILPFEEHKI--RMLKPSWTGAPDKLMWVHSVTGEYTTKTGYAVA 859

Query: 932  ----SDNNPTTSSLAEFPWKKFWKQVQSLPKIKNFVWK 831
                +D       + +F W+K    + + PK K F+WK
Sbjct: 860  IPKHTDLTQIPQGILDFNWRKSVWNLHTAPKNKIFIWK 897



 Score = 63.5 bits (153), Expect(2) = 4e-26
 Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 17/249 (6%)
 Frame = -3

Query: 847  RISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPIMI 668
            +I   K+ H  + V   L    I++   C +C  + E+I HL   C FA +V+   P+  
Sbjct: 892  KIFIWKIFHRALPVGEILRARQINVDGRCKICG-LPETIDHLFLHCSFAKQVWNLVPVWP 950

Query: 667  EVQGESVMDIIGHW------LTYPDQGIML-NLGVCLMWNIWKARSELVFNNNHTAVGSC 509
             +      ++   W         P  G+   +L   ++W +WKAR+ L+FN+   +V   
Sbjct: 951  SIDYSGTAELRSEWNHLMARQALPPTGLAAGSLAPWILWQLWKARNSLLFNDKGFSVRDI 1010

Query: 508  IHKALEDFKSFDLHHALNFCSEIQVNQNIIAHWEPPPPTFVKINVDATYNNAK-----GX 344
            I  A+   + ++    L    +I +   +      P    V++  DA +N A      G 
Sbjct: 1011 ISVAIAAAREWNQSQELASTKKILLKPRV-----TPQEDSVRVRSDAAWNEANKVAGLGW 1065

Query: 343  XXXXXVDSFGY-----HLGCGSFCFDTFSAAVADAKAYGFGVHLAKRLQLSRIIVEGDAS 179
                   S  Y     ++G         S  VA+  A    +   + L L R+  E D +
Sbjct: 1066 IIRSRNRSSSYSEPARYVG---------SPLVAEGLALREAILRCRDLGLPRLRCESDCA 1116

Query: 178  EVPKAVTGN 152
            ++ KA+T +
Sbjct: 1117 QLIKALTSD 1125


>ref|XP_013645686.1| PREDICTED: uncharacterized protein LOC106350330 [Brassica napus]
          Length = 1126

 Score = 86.7 bits (213), Expect(2) = 4e-26
 Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
 Frame = -2

Query: 1289 SNTWKDMMTVRNIFVNNCCWFIGSGNNIHVWNDPWIPNLPGFRPSRLHNASTHVTWVSQL 1110
            S+ W+ ++  R+I +N+  W +G+G++I++W  PW+      RP            VS L
Sbjct: 718  SHGWRGILIGRDIIINSAGWEVGNGSSINIWEKPWLSCSTQLRPMGPPPRDFSQLTVSDL 777

Query: 1109 FVQGQRIWNMDLLLELFPLDQAEIISQIYIPQDEEIQDQLIWLKTPSGQFTTKSCYK-LL 933
             +  +  W++D++  + P ++  I++    P      D+L WL T +G ++TK+ YK +L
Sbjct: 778  MLPDRNEWDIDMIQRVLPFEEQRILA--IKPSLTGAPDKLSWLSTDTGDYSTKTGYKAVL 835

Query: 932  SDNNPTTSSLAE---FPWKKFWKQVQSLPKIKNFVWKS 828
            S  +   +   E   F WKK   ++Q+ P IK F+WK+
Sbjct: 836  SSRSVEDAGSIEDGSFDWKKSVWKLQTTPMIKLFIWKA 873



 Score = 60.8 bits (146), Expect(2) = 4e-26
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
 Frame = -3

Query: 850  LRISCGKVLHEGIDVYANLSKHNIHIQNVCPLCNSVEESILHLLFQCQFASEVYQTSPIM 671
            +++   K LH  + V   L    I+    C  CN + ESI HLLF C +A +V++++P+ 
Sbjct: 866  IKLFIWKALHGALPVSEALKARGINTDGQCKRCN-MPESIDHLLFHCSYARQVWESAPVS 924

Query: 670  IEVQGESVMDIIGHWLTY------PDQGIMLN-LGVCLMWNIWKARSELVFNNNHTAVGS 512
              ++    +D+  +W ++      P  G+    L   + W +W AR++LVF      V  
Sbjct: 925  PSIEYSGSIDLRSNWSSFCSRKSLPPTGVSTGALAPWITWQLWLARNKLVFEGKIITVEE 984

Query: 511  CI 506
             I
Sbjct: 985  TI 986