BLASTX nr result
ID: Papaver30_contig00016343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00016343
(1070 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_013705346.1| PREDICTED: replication protein A 70 kDa DNA-... 60 3e-06
emb|CDY23091.1| BnaC07g30960D [Brassica napus] 60 3e-06
ref|XP_013596245.1| PREDICTED: LOW QUALITY PROTEIN: replication ... 59 5e-06
gb|KRH03137.1| hypothetical protein GLYMA_17G078700 [Glycine max] 59 7e-06
ref|XP_013736968.1| PREDICTED: replication protein A 70 kDa DNA-... 59 7e-06
ref|XP_009136427.1| PREDICTED: LOW QUALITY PROTEIN: replication ... 59 7e-06
emb|CDY02177.1| BnaA03g39900D [Brassica napus] 59 7e-06
ref|XP_006600581.1| PREDICTED: replication protein A 70 kDa DNA-... 59 7e-06
ref|XP_006399289.1| hypothetical protein EUTSA_v10013014mg [Eutr... 59 7e-06
ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana] gi|7... 59 7e-06
ref|XP_010483760.1| PREDICTED: replication protein A 70 kDa DNA-... 59 9e-06
ref|XP_010443916.1| PREDICTED: replication protein A 70 kDa DNA-... 59 9e-06
ref|XP_010456895.1| PREDICTED: replication protein A 70 kDa DNA-... 59 9e-06
ref|NP_200908.1| replication protein A 70 kDa DNA-binding subuni... 59 9e-06
ref|XP_006394544.1| hypothetical protein EUTSA_v10003822mg [Eutr... 59 9e-06
ref|XP_006287282.1| hypothetical protein CARUB_v10000503mg [Caps... 59 9e-06
ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, part... 59 9e-06
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab... 59 9e-06
>ref|XP_013705346.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
[Brassica napus]
Length = 627
Score = 60.1 bits (144), Expect = 3e-06
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT++GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 344 TLADESKKTVVVSLWNNLATSIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 398
>emb|CDY23091.1| BnaC07g30960D [Brassica napus]
Length = 1033
Score = 60.1 bits (144), Expect = 3e-06
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT++GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 275 TLADESKKTVVVSLWNNLATSIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 329
>ref|XP_013596245.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit D [Brassica oleracea var. oleracea]
Length = 611
Score = 59.3 bits (142), Expect = 5e-06
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTASSA 577
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S +
Sbjct: 328 TLADESKKTVVVSLWNNLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTISGS 384
>gb|KRH03137.1| hypothetical protein GLYMA_17G078700 [Glycine max]
Length = 527
Score = 58.9 bits (141), Expect = 7e-06
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVT 565
T+ + KT+VVSL N LATT GQELLD++D P++AIKSLK G QG + T
Sbjct: 340 TIADDTKKTVVVSLWNELATTTGQELLDIVDKSPVVAIKSLKVGDFQGVSLST 392
>ref|XP_013736968.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
[Brassica napus]
Length = 609
Score = 58.9 bits (141), Expect = 7e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 325 TLADESKKTVVVSLWNNLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 379
>ref|XP_009136427.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
DNA-binding subunit D [Brassica rapa]
Length = 609
Score = 58.9 bits (141), Expect = 7e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 325 TLADESKKTVVVSLWNNLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 379
>emb|CDY02177.1| BnaA03g39900D [Brassica napus]
Length = 565
Score = 58.9 bits (141), Expect = 7e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 297 TLADESKKTVVVSLWNNLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 351
>ref|XP_006600581.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
[Glycine max] gi|734367712|gb|KHN18358.1| Replication
protein A 70 kDa DNA-binding subunit [Glycine soja]
gi|947053683|gb|KRH03136.1| hypothetical protein
GLYMA_17G078700 [Glycine max]
Length = 619
Score = 58.9 bits (141), Expect = 7e-06
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVT 565
T+ + KT+VVSL N LATT GQELLD++D P++AIKSLK G QG + T
Sbjct: 340 TIADDTKKTVVVSLWNELATTTGQELLDIVDKSPVVAIKSLKVGDFQGVSLST 392
>ref|XP_006399289.1| hypothetical protein EUTSA_v10013014mg [Eutrema salsugineum]
gi|557100379|gb|ESQ40742.1| hypothetical protein
EUTSA_v10013014mg [Eutrema salsugineum]
Length = 605
Score = 58.9 bits (141), Expect = 7e-06
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D+ PI+AIKSLK G QG + T S
Sbjct: 323 TLADETKKTVVVSLWNDLATGLGQELLDMADNYPIIAIKSLKVGDFQGVSLSTVS 377
>ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana]
gi|75337075|sp|Q9SD82.1|RFA1B_ARATH RecName:
Full=Replication protein A 70 kDa DNA-binding subunit B;
Short=AtRPA70B; AltName: Full=AtRPA1-5; AltName:
Full=Replication factor A protein 1B; AltName:
Full=Replication protein A 1B; Short=AtRPA1B
gi|6562316|emb|CAB62614.1| replication factor A-like
protein [Arabidopsis thaliana]
gi|332003852|gb|AED91235.1| RPA70-kDa subunit B
[Arabidopsis thaliana]
Length = 604
Score = 58.9 bits (141), Expect = 7e-06
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D+ P++AIKSLK G QG + T S
Sbjct: 323 TLADETKKTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTIS 377
>ref|XP_010483760.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
[Camelina sativa]
Length = 639
Score = 58.5 bits (140), Expect = 9e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 355 TLADESKKTVVVSLWNDLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 409
>ref|XP_010443916.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D
[Camelina sativa]
Length = 637
Score = 58.5 bits (140), Expect = 9e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 350 TLADESKKTVVVSLWNDLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 404
>ref|XP_010456895.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like
[Camelina sativa]
Length = 642
Score = 58.5 bits (140), Expect = 9e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 355 TLADESKKTVVVSLWNDLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 409
>ref|NP_200908.1| replication protein A 70 kDa DNA-binding subunit D [Arabidopsis
thaliana] gi|75171651|sp|Q9FME0.1|RFA1D_ARATH RecName:
Full=Replication protein A 70 kDa DNA-binding subunit D;
Short=AtRPA70D; AltName: Full=AtRPA1-4; AltName:
Full=Replication factor A protein 1D; AltName:
Full=Replication protein A 1D; Short=AtRPA1D
gi|10177323|dbj|BAB10649.1| replication protein A1
[Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
putative RNA helicase [Arabidopsis thaliana]
gi|332010026|gb|AED97409.1| Replication factor-A protein
1-like protein [Arabidopsis thaliana]
Length = 629
Score = 58.5 bits (140), Expect = 9e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 347 TLADESRKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTIS 401
>ref|XP_006394544.1| hypothetical protein EUTSA_v10003822mg [Eutrema salsugineum]
gi|557091183|gb|ESQ31830.1| hypothetical protein
EUTSA_v10003822mg [Eutrema salsugineum]
Length = 625
Score = 58.5 bits (140), Expect = 9e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 346 TLADESKKTVVVSLWNDLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 400
>ref|XP_006287282.1| hypothetical protein CARUB_v10000503mg [Capsella rubella]
gi|482555988|gb|EOA20180.1| hypothetical protein
CARUB_v10000503mg [Capsella rubella]
Length = 607
Score = 58.5 bits (140), Expect = 9e-06
Identities = 31/55 (56%), Positives = 40/55 (72%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D+ P++AIKSLK G QG + T S
Sbjct: 326 TLADETKKTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGDFQGVSLSTIS 380
>ref|XP_006280119.1| hypothetical protein CARUB_v10026014mg, partial [Capsella rubella]
gi|482548823|gb|EOA13017.1| hypothetical protein
CARUB_v10026014mg, partial [Capsella rubella]
Length = 680
Score = 58.5 bits (140), Expect = 9e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 398 TLADESKKTVVVSLWNDLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTIS 452
>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 58.5 bits (140), Expect = 9e-06
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2
Query: 407 TLINK*NKTIVVSL*NGLATTMGQELLDVLDSDPIMAIKSLKFGGLQGT*MVTAS 571
TL ++ KT+VVSL N LAT +GQELLD+ D P++AIKSLK G QG + T S
Sbjct: 349 TLADESKKTVVVSLWNDLATGIGQELLDMADKSPVVAIKSLKVGDFQGVSLSTIS 403