BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00016332
         (2269 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   445   e-174
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   457   e-173
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        442   e-171
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   449   e-170
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...   438   e-169
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     427   e-165
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   421   e-165
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      439   e-164
ref|NP_001175365.1| Os08g0123950, partial [Oryza sativa Japonica...   423   e-164
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        435   e-163
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   420   e-161
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]                417   e-160
gb|ABA99961.1| retrotransposon protein, putative, unclassified [...   414   e-159
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   421   e-159
ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648...   404   e-159
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   407   e-158
ref|XP_007216306.1| hypothetical protein PRUPE_ppa019597mg, part...   385   e-158
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g...   413   e-158
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]    416   e-157
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja...   406   e-156

>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  445 bits (1145), Expect(3) = e-174
 Identities = 214/452 (47%), Positives = 291/452 (64%), Gaps = 2/452 (0%)
 Frame = -3

Query: 1589 LINVDSVP--HFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYVRAK 1416
            LI  D  P  H+  +  +L+YK RIY+G    +R  +L + HA   GG SG+ ATY R K
Sbjct: 1158 LIETDGDPERHYKLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIK 1217

Query: 1415 SHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGLLVS 1236
              FYW G+ K +  ++  C      K++  ++ GLL PL +PD AW HITMDFI+GL  S
Sbjct: 1218 QLFYWPGLKKQVEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKS 1277

Query: 1235 NRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVFTSH 1056
              K+VILV+VD LTKYAHF+ L HPYT   V Q F+ N+ KLHG+P  IV+DRD+VFTS+
Sbjct: 1278 QGKDVILVVVDRLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSN 1337

Query: 1055 FWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAEWWY 876
            F+Q++FK     L  STA+H QTDGQTERVN CLE+YLR +   +P  W  WL LAEWWY
Sbjct: 1338 FFQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWY 1397

Query: 875  NTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHKAQE 696
            NT+YH  ++M+ FQALYGY P  +                L+D+A++L  LK S+ +AQ 
Sbjct: 1398 NTTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVTLEDKALILQKLKSSIGEAQR 1457

Query: 695  RVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGVVAY 516
            R+K YAD  R ER+  + D VYL+LQ YR+ ++  R + KL +K+YGPF+V++K+G VAY
Sbjct: 1458 RIKFYADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAY 1517

Query: 515  RLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLIGQQ 336
            +L+LP  + IHPVFHVS+LKKH+G +  P   LP +   G +   P  VLQ R +    +
Sbjct: 1518 KLQLPDGAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNE 1577

Query: 335  PIHQVLIQWTHSSAKDATWEAVSNIRASYPRF 240
            P+ Q LI W + +  +ATWE  S I+A++P F
Sbjct: 1578 PVTQWLILWENLTPAEATWEDASYIQAAFPNF 1609



 Score =  194 bits (494), Expect(3) = e-174
 Identities = 96/201 (47%), Positives = 137/201 (68%), Gaps = 3/201 (1%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YR+F++GY  I +PL DLLKK+ F         FE LK  M N+PVLALPDF++ FV+E
Sbjct: 949  YYRRFIKGYGVICRPLHDLLKKDGFKWGDTQQEAFELLKEKMCNSPVLALPDFSQPFVIE 1008

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DA  + +GAVL+Q+G+P+AYF+K LGP+  A S YEKE +AI+  ++ WRHY+ G + I
Sbjct: 1009 TDACGIGIGAVLMQKGRPLAYFSKALGPKAAAQSVYEKEAIAILEALKKWRHYILGGSLI 1068

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPAI---SC 1681
            IKTD QS+++ ++Q +   +QHK L+KL+ FDY I+YK G EN+VA ALSR P +    C
Sbjct: 1069 IKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYVIEYKSGKENLVADALSRSPNLKEEQC 1128

Query: 1680 IXXXXXXXSWMQDVVLRYAQD 1618
            +        W+QD+   Y +D
Sbjct: 1129 LPITVVVPEWVQDIKRSYEED 1149



 Score = 25.0 bits (53), Expect(3) = e-174
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 2255 PKNIKELRGFLGLTG 2211
            PKN+ E+R FLG+ G
Sbjct: 934  PKNVTEVREFLGMAG 948


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  457 bits (1176), Expect(3) = e-173
 Identities = 222/455 (48%), Positives = 300/455 (65%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L+ QL +  ++   +T    +LRYK RIY+G    +R NI+HSLH   VGG SG  ATY 
Sbjct: 880  LMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQ 939

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            R K  FYW GM K+I   V  C +  R+K++  +  GLL+PLPIPD AW HI+MDFI+GL
Sbjct: 940  RVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGL 999

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S  K VI V+VD  TKYAH + L HPY+   VAQAF+ N+FKLHG P +IVSDRD++F
Sbjct: 1000 PSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIF 1059

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS  WQ+LFK++   L  STAYH QTDGQTERVN C+E+YLRC+   +P  W  WL LAE
Sbjct: 1060 TSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAE 1119

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            WWYNT++H  LK+S FQALYG+ P  ++ +            +L+++ +ML  LKE+L +
Sbjct: 1120 WWYNTTFHTALKLSPFQALYGFPPPLINEVAIPGPEDNEARDFLEEKQVMLRRLKENLAQ 1179

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ R+K YAD +R ER  TV D VYL++Q YR  +   ++  KL++ FYGPF+V+Q+VG 
Sbjct: 1180 AQTRMKKYADLNRSERQLTVGDMVYLKMQPYRTTAFGLKQALKLTSIFYGPFRVMQRVGK 1239

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAYRL+LP    IHPVFH+S+LK+H G    PS  LP+V + G +   P  V ++R +  
Sbjct: 1240 VAYRLQLPEGVGIHPVFHISQLKQHCGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPR 1299

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRF 240
                + Q L+QW +   +DA+WE  S I++++P F
Sbjct: 1300 NHTLVTQWLVQWANLPPEDASWEDASFIKSTFPEF 1334



 Score =  176 bits (447), Expect(3) = e-173
 Identities = 91/198 (45%), Positives = 128/198 (64%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YR+F++ Y  I +PL D+L+K  F         F KLKLAM+  PVLALPDF++ F +E
Sbjct: 678  YYRRFIRHYGVICRPLYDMLRKGGFDWKDPQDEAFVKLKLAMTTAPVLALPDFSENFTLE 737

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DAS   +G VL+Q G+P+AYF++ LG R  A+STY++E LAI+  ++ WRHY  G   I
Sbjct: 738  TDASGTGIGGVLMQRGRPLAYFSRTLGVRAAAMSTYDREALAIIESLKRWRHYFLGTQLI 797

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPAISCIXX 1672
            I+TD QS+++   Q +   +QHK +++LL FDY I+YKKG EN VA ALSRR   S +  
Sbjct: 798  IRTDQQSLKFMTDQKVAEGIQHKLMLRLLEFDYTIEYKKGKENKVADALSRR-GNSVMAI 856

Query: 1671 XXXXXSWMQDVVLRYAQD 1618
                 SW++ V   Y  D
Sbjct: 857  SIAVPSWIEAVTNSYQND 874



 Score = 26.9 bits (58), Expect(3) = e-173
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W  P+++ +LR FLG+TG
Sbjct: 660  WPKPQDLTQLRSFLGMTG 677


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  442 bits (1138), Expect(3) = e-171
 Identities = 209/446 (46%), Positives = 292/446 (65%)
 Frame = -3

Query: 1577 DSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYVRAKSHFYWQ 1398
            D+   ++ +  +LRYK RIY+G    +R+ ++ S H+   GG SGM ATY R KS FYW 
Sbjct: 1139 DTDGSYSQEAGLLRYKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIKSLFYWP 1198

Query: 1397 GMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGLLVSNRKNVI 1218
            G+ K +  F+  C I    K++  ++ GLL PL +PD AW HITMDF++GL  SN K+VI
Sbjct: 1199 GLKKAVEGFIRECPICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVI 1258

Query: 1217 LVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVFTSHFWQDLF 1038
            LV+VD LTKYAHFI + HPYT   V + F+ N+ +LHG+P +I++DRD++FTS  +Q++F
Sbjct: 1259 LVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIF 1318

Query: 1037 KALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAEWWYNTSYHR 858
            K++   L  ST+YH QTDGQTERVN CLE+YLR +   +P+ W  WL LAEWWYNT+YH 
Sbjct: 1319 KSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHT 1378

Query: 857  GLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHKAQERVKLYA 678
             ++M+ FQALYGY P  ++  +            ++ +  ++  LK SL +AQ R+K YA
Sbjct: 1379 SIQMTPFQALYGYPPPQINEFSVPCNVSEEARVTIEQKDAIIQKLKYSLTEAQRRIKHYA 1438

Query: 677  DTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGVVAYRLELPS 498
            D +R ER+  V D VYL+LQ YR+ +   R + KL +KFYGPF++++KVG VAY+L+LP 
Sbjct: 1439 DRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPE 1498

Query: 497  SSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLIGQQPIHQVL 318
             S IHPVFHVS+LKKHIG +  P   LP V   G +   P  VL+ R +  G   + Q L
Sbjct: 1499 GSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWL 1558

Query: 317  IQWTHSSAKDATWEAVSNIRASYPRF 240
            + W + S  +ATWE  S I++ +P F
Sbjct: 1559 VLWHNLSPSEATWEDASMIQSMFPSF 1584



 Score =  186 bits (473), Expect(3) = e-171
 Identities = 93/199 (46%), Positives = 131/199 (65%), Gaps = 1/199 (0%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YR+F++ Y  + +PL D+LKK  F      T  FE LK  M  +PVL+LPDFTK+FV+E
Sbjct: 926  YYRRFIKNYGIVCRPLHDMLKKEGFQWEREQTEAFETLKTHMCTSPVLSLPDFTKEFVIE 985

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DA    +GAVL+Q G+P+AYF+K LGP+  A S YEKE +AI+  ++ WRHY+ G+  I
Sbjct: 986  ADACGNGIGAVLMQSGRPLAYFSKTLGPKAAAQSIYEKEAMAILEALKKWRHYVLGSRLI 1045

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSR-RPAISCIX 1675
            IKTD QS+++ + Q +   +QHK L+KL+ +DY I+YK G EN+VA ALSR  PA  C  
Sbjct: 1046 IKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLVADALSRIPPAEQCQA 1105

Query: 1674 XXXXXXSWMQDVVLRYAQD 1618
                   W++D+   Y  D
Sbjct: 1106 ITTVIPEWVRDIQRSYEGD 1124



 Score = 26.9 bits (58), Expect(3) = e-171
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 2267 TWTLPKNIKELRGFLGLTG 2211
            T+  PK++ +LR FLG+TG
Sbjct: 907  TYPTPKSVTDLRKFLGMTG 925


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  449 bits (1154), Expect(3) = e-170
 Identities = 220/459 (47%), Positives = 303/459 (66%), Gaps = 4/459 (0%)
 Frame = -3

Query: 1601 ISQLLINVD--SVPHFTYKER--ILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHA 1434
            + Q++ N++  S+    YK+R  +L YK R+YI +   +R+ IL+ LH+   GG SG H 
Sbjct: 1007 LQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQILYLLHSSPQGGHSGFHK 1066

Query: 1433 TYVRAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFI 1254
            T  RAKS FYW+GM K++  F+  CDI  +NKS+  +  GLLQPLPIP + W  I++DFI
Sbjct: 1067 TLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFI 1126

Query: 1253 DGLLVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRD 1074
            +GL  S   +VI+V+VD L+KYAHFI + HPYT + +AQ FL N+FKLHGLP+SIV+DRD
Sbjct: 1127 EGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRD 1186

Query: 1073 KVFTSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLY 894
              FTS FW++LFK  GT+L  S+AYH QTDGQTE VN  +E YLRC  G KP  W +WL 
Sbjct: 1187 PTFTSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLP 1246

Query: 893  LAEWWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKES 714
            LAEWWYNT+ H   K+S F+++YGY P  +   T   T +  +E  LK R  ++  L+ +
Sbjct: 1247 LAEWWYNTNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRTN 1306

Query: 713  LHKAQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQK 534
            L  AQ+R+K +AD     RSF + D VYLRLQ Y++ SV QR+N KLS +FYGP++VL+K
Sbjct: 1307 LQLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEK 1366

Query: 533  VGVVAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRT 354
            +G VAYRLELP  ++IHPVFHVS LK+ +G +H    TLP  D+ GV+   PE++L  R 
Sbjct: 1367 IGTVAYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRL 1426

Query: 353  VLIGQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRFI 237
                   + +VL++W      +A+W   S +   +P  +
Sbjct: 1427 KKKKNHAVTEVLVKWKGLGEDEASWVEYSTLVNEFPDLV 1465



 Score =  170 bits (430), Expect(3) = e-170
 Identities = 84/172 (48%), Positives = 122/172 (70%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YRKF++GY  I  PL+ LLKKN F  + +    F+ LK  +++ PVLALPDF+  F ++
Sbjct: 803  YYRKFIKGYGLIAAPLTALLKKNSFKWTESAKRAFQDLKHDVTSPPVLALPDFSIPFTIQ 862

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
             DAS + VGAVL+Q+G+P+AY ++ +  +   LSTYEKE +A+VL V+ WR YL G NF 
Sbjct: 863  CDASGIGVGAVLMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFK 922

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRR 1696
            I+TD  S++Y L Q + T +Q KW+ KLLG+++ ++YK+G EN VA ALSR+
Sbjct: 923  IQTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVADALSRK 974



 Score = 31.6 bits (70), Expect(3) = e-170
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W  P ++K LRGFLGLTG
Sbjct: 785  WPFPTSLKSLRGFLGLTG 802


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score =  438 bits (1127), Expect(3) = e-169
 Identities = 208/446 (46%), Positives = 285/446 (63%)
 Frame = -3

Query: 1577 DSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYVRAKSHFYWQ 1398
            D    + ++  I++YK RIY+G  G +R  ++ + H+   GG  G+ ATY R K  FYW 
Sbjct: 508  DPEGEYKFEAGIMKYKGRIYVGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLFYWP 567

Query: 1397 GMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGLLVSNRKNVI 1218
            G+ K +   + +C +    KS+  ++ GLL PL +PD AW HI+MDF++GL  S  K+VI
Sbjct: 568  GLKKGVENHIRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVI 627

Query: 1217 LVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVFTSHFWQDLF 1038
            LV+VD LTKYAHFI L HPYT   V Q F+ N+ KLHG+P +IV+DRD+VFTS F+Q++F
Sbjct: 628  LVVVDRLTKYAHFIALSHPYTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVF 687

Query: 1037 KALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAEWWYNTSYHR 858
            K+    L  STAYH QTDGQTERVN CLE+YLRC+   +P +W  W+ LAEWWYNT+YH 
Sbjct: 688  KSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHT 747

Query: 857  GLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHKAQERVKLYA 678
             ++M+ F+ALYGY+P  +   +            L+++  ++  LK S+  AQ R+K YA
Sbjct: 748  AIQMTPFKALYGYSPPQISEFSVPCDVSQEARVTLEEKETIVQKLKASMEDAQRRMKYYA 807

Query: 677  DTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGVVAYRLELPS 498
            D +R ER   V D VYL+LQ YR+ +   R + KL  K+YGPF+VL+KVG VAYRL+LP 
Sbjct: 808  DRNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPE 867

Query: 497  SSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLIGQQPIHQVL 318
             + IHPVFHVS+LKKH+G    P   LP V   G +   P  VLQ R +      + Q L
Sbjct: 868  EAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWL 927

Query: 317  IQWTHSSAKDATWEAVSNIRASYPRF 240
            I W++ +  +ATWE  S I+  +P F
Sbjct: 928  ILWSNLTPAEATWEDASYIQKVFPNF 953



 Score =  181 bits (459), Expect(3) = e-169
 Identities = 90/204 (44%), Positives = 133/204 (65%), Gaps = 6/204 (2%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YR+F++GY  I +PL D+LKK  F+  LA +  F +LK  +  +PVLALP+F + FV+E
Sbjct: 290  YYRRFIKGYGLICRPLHDMLKKGGFNWGLAQSEAFTELKGKLCTSPVLALPNFEQPFVIE 349

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DA ++ +GAVL+Q G+PIAY++K LGP+  A S YEKE +AI+  ++ WRHY+ G   +
Sbjct: 350  ADACEVGIGAVLMQAGRPIAYYSKALGPKAAAQSIYEKEAMAILEALKRWRHYVLGGELV 409

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPAIS---- 1684
            IKTD QS++Y + Q +   +QHK L+KL+ ++Y I+YK G EN+VA ALSR P       
Sbjct: 410  IKTDQQSLKYMMNQRLVEGIQHKLLLKLMEYNYTIEYKAGRENLVADALSRSPKNKEEVT 469

Query: 1683 --CIXXXXXXXSWMQDVVLRYAQD 1618
              C         W+ D+   Y +D
Sbjct: 470  ELCAAIAVVVPEWILDIKRSYEED 493



 Score = 26.9 bits (58), Expect(3) = e-169
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -3

Query: 2255 PKNIKELRGFLGLTG 2211
            PKN+ E+R FLG+TG
Sbjct: 275  PKNVTEVREFLGMTG 289


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  427 bits (1097), Expect(3) = e-165
 Identities = 211/452 (46%), Positives = 290/452 (64%), Gaps = 2/452 (0%)
 Frame = -3

Query: 1589 LINVDSVPHFTYKER--ILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYVRAK 1416
            LI   + P   YK    +L+YK RIY+G   ++R  ++ + H+   GG SGM AT+ R K
Sbjct: 1022 LIGTAADPDREYKLEAGLLKYKGRIYVGEATDIRRQLITTYHSSSFGGHSGMRATHHRIK 1081

Query: 1415 SHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGLLVS 1236
              FYW GM  ++  F+  C      KS+  ++ GLL PL IPD AW HITMDFI+GL  S
Sbjct: 1082 MLFYWHGMRGEVERFIRECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKS 1141

Query: 1235 NRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVFTSH 1056
              K+VILV+VD LTKYAHFI L HPY    V +AF+ N+ KLHG+P  I++DRD++FTS 
Sbjct: 1142 QGKDVILVVVDRLTKYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDRIFTSS 1201

Query: 1055 FWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAEWWY 876
             +Q++FKA+   L  STAYH Q DGQTERVN CLE+YLR +   +P  W  WL LAEWWY
Sbjct: 1202 LFQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQEPHKWYSWLALAEWWY 1261

Query: 875  NTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHKAQE 696
            NT++H  ++M+ F+A+YGY+P  ++  +            ++++  +L+ LK SL  AQ 
Sbjct: 1262 NTTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVTIEEKEAILNKLKNSLADAQH 1321

Query: 695  RVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGVVAY 516
            R+K +AD +R ER+  V D VYL+L+ YR+++   R + KL +KFYGPF+VLQK+G +AY
Sbjct: 1322 RMKYFADKNRTERNLEVGDMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAY 1381

Query: 515  RLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLIGQQ 336
            +L+LP  ++IHPVFHVS+LKKH+G    P + LP V   G +   P  VLQ R V     
Sbjct: 1382 KLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGV 1441

Query: 335  PIHQVLIQWTHSSAKDATWEAVSNIRASYPRF 240
             + Q LI W + S  +ATWE  S I+A +P F
Sbjct: 1442 AVTQWLILWQNLSPAEATWEDASVIQAMFPSF 1473



 Score =  182 bits (461), Expect(3) = e-165
 Identities = 92/203 (45%), Positives = 129/203 (63%), Gaps = 5/203 (2%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YR+F+QGY  I +P+ D+LKKN F      T  FE LK  +  +PVLALPDF + F +E
Sbjct: 811  YYRRFIQGYGTICRPIHDMLKKNGFQWGADQTTAFETLKHKLRTSPVLALPDFDQAFTIE 870

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DA  + +GAVL+Q G+PIA+F+K LGP+    S YEKE +AI+  ++ WRHY+ G+  I
Sbjct: 871  ADACGVGIGAVLMQGGRPIAFFSKALGPKAAGQSIYEKEAMAILEALKKWRHYVLGSKLI 930

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRP-----AI 1687
            IKTD QS+++ + Q +   +QHK L+KL+ +DY I+YK G EN+VA ALSR P     A 
Sbjct: 931  IKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDYTIEYKSGKENLVADALSRLPQKEAVAD 990

Query: 1686 SCIXXXXXXXSWMQDVVLRYAQD 1618
             C         W+ D+   Y  D
Sbjct: 991  RCHPMTVVIPEWIVDIQRSYEND 1013



 Score = 27.3 bits (59), Expect(3) = e-165
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W  PK++ ++R FLG+TG
Sbjct: 793  WPTPKDVTDVRKFLGMTG 810


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  421 bits (1082), Expect(3) = e-165
 Identities = 210/455 (46%), Positives = 285/455 (62%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L S L I   S P +T K  ILRYK+ I +G+G  +R+ +L S H   +GG SG  ATY 
Sbjct: 410  LESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQ 469

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            R K  FYW GM   +  FV  C +  +NK++     GLLQPLP+P+ AW HITMDF++GL
Sbjct: 470  RMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGL 529

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S  K+VI VIVD  TKYAHFI L HP+T   +   FL + +KLHGLP+ IVSDRD++F
Sbjct: 530  PKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIF 589

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS  W+++F+  G  L+ S+AYH QTDGQ+ERVN CLENYLRC+   KP  W   L  AE
Sbjct: 590  TSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAE 649

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            WWYNT++H  L MS +QAL+G  P  +  L    + +       + +A +L+ +K  L K
Sbjct: 650  WWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVK 709

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ R+K +AD  R ER+  V D VYL++Q YR  S+    + KL +++YGPF+VL+++G 
Sbjct: 710  AQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGS 769

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAY+L LP +S+IH VFHVS+LKKH+G +  P   LP++D  G ++  P  VL  R +  
Sbjct: 770  VAYKLLLPVTSQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPR 829

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRF 240
              +P+ Q  I W +     ATWE  + I   +P F
Sbjct: 830  NNEPVVQWKIHWANLPESAATWEDAAFITKVFPSF 864



 Score =  184 bits (466), Expect(3) = e-165
 Identities = 89/198 (44%), Positives = 130/198 (65%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YR+F++ +  I +P+ D LKKN FH        F+ +KL ++  PVLA+PDF+  F++E
Sbjct: 207  YYRRFIKNFGIICRPMFDALKKNNFHWQEVQQQAFDAIKLQLAQAPVLAMPDFSLPFILE 266

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DAS   +GAVL+Q G+P+AY +K +GP+  ALSTY+KE LAI+  ++ W+HY  G + I
Sbjct: 267  ADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALSTYDKEALAILEALKKWKHYFLGTSLI 326

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPAISCIXX 1672
            I+TD  S++Y   Q IT  VQHK LIKLL +DY+I+YKKG EN  A ALSR   ++ +  
Sbjct: 327  IRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQENKAADALSRMQQLNALTT 386

Query: 1671 XXXXXSWMQDVVLRYAQD 1618
                  W+ +V   Y+ D
Sbjct: 387  TVIVPQWITEVAASYSTD 404



 Score = 29.6 bits (65), Expect(3) = e-165
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W  P +I ELRGFLGL G
Sbjct: 189  WPTPTSITELRGFLGLAG 206


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  439 bits (1129), Expect(3) = e-164
 Identities = 219/473 (46%), Positives = 307/473 (64%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L++QL++N      F+  + I+R+KNRI++G    ++  +L ++H   VGG SG  ATY 
Sbjct: 1086 LLAQLILNSADKAPFSLHQGIIRHKNRIWLGGNLQLQQKVLQAMHDTAVGGHSGAPATYH 1145

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            + K  FYW GM  D+L +V  C +  ++K D+    GLLQPL +P QAW  I++DFI+GL
Sbjct: 1146 KVKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKYPGLLQPLEVPPQAWHTISLDFIEGL 1205

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S   N ILV+VD  +KY HF+ L HP+T A VA+ FL NV+KLHGLP +I+SDRD++F
Sbjct: 1206 PRSAHYNCILVVVDKFSKYGHFLPLLHPFTAAKVARVFLDNVYKLHGLPVNIISDRDRIF 1265

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS FWQ LF+  GT+L+MS++YH Q+DGQTER+N CLE +LRC     PS WS WL +AE
Sbjct: 1266 TSSFWQQLFQITGTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAE 1325

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            +WYNT+ H  L  + F+ LYG+ P H   L         +ET+LK+R +M   +K  LH+
Sbjct: 1326 YWYNTTVHSTLGRTPFEVLYGHTPRHFGILVDTVVPQPELETWLKERELMTKVIKLHLHR 1385

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ+R+K  AD  R ER F+V D+VYL+LQ Y ++SV+ R N KLS KF+GPFQ+  ++G 
Sbjct: 1386 AQDRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSVATRSNHKLSFKFFGPFQITDRLGS 1445

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAYRL LP+SS IHP+FHVS+LK+ IG     S  LP   Q    I  P ++LQ R +  
Sbjct: 1446 VAYRLALPASSSIHPIFHVSQLKRVIGRDQRASPQLP---QDVGPIQVPTRILQRRFIDR 1502

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRFILEDKDLLQGEAMLHTTS 186
            G + I QV + W+  +   ATWE V  +RA +P+ ++ D+   +G+  +   S
Sbjct: 1503 GGELIAQVKVVWSGMTEDLATWEDVEALRARFPKALIWDQAGARGQGNVSKAS 1555



 Score =  166 bits (419), Expect(3) = e-164
 Identities = 91/200 (45%), Positives = 127/200 (63%), Gaps = 3/200 (1%)
 Frame = -2

Query: 2208 YRKFMQGYVAIGKPLSDLLKKN-YFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            YRKF++ +  I +PL DLLKK+  F  ++  +  FE LK A+   PVLALPDF++ F + 
Sbjct: 881  YRKFVKHFGIISRPLFDLLKKHTLFVWTVDHSKAFEVLKQALVTAPVLALPDFSQPFCIH 940

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DAS   VGAVL+Q G P+A+ +K LGP+++ LSTYEKE++AI+L +  WR YLQ A FI
Sbjct: 941  TDASYYGVGAVLMQSGHPLAFLSKALGPKNQGLSTYEKEYMAIILAIAQWRSYLQLAEFI 1000

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRR--PAISCI 1678
            I TDH+S+     Q + T+ Q K   KL G  Y+I Y+KG +N  A ALSR+      C 
Sbjct: 1001 IYTDHRSLAQLNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGAADALSRKVQEDSHCC 1060

Query: 1677 XXXXXXXSWMQDVVLRYAQD 1618
                   +W+Q+VV  Y +D
Sbjct: 1061 AISHSVPTWLQEVVEGYDKD 1080



 Score = 28.1 bits (61), Expect(3) = e-164
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 2267 TWTLPKNIKELRGFLGLTG 2211
            +W +P + KELR FLGL G
Sbjct: 861  SWAVPTSAKELRCFLGLAG 879


>ref|NP_001175365.1| Os08g0123950, partial [Oryza sativa Japonica Group]
            gi|255678117|dbj|BAH94093.1| Os08g0123950, partial [Oryza
            sativa Japonica Group]
          Length = 783

 Score =  423 bits (1088), Expect(3) = e-164
 Identities = 211/473 (44%), Positives = 307/473 (64%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L++ L +N +S PHF+ +  +LRYK  I+IG+  +++  I++ +HA  VGG SG   TY 
Sbjct: 253  LVAALTLNPNSKPHFSLQHGVLRYKGNIWIGNSPDLQLKIINEMHASPVGGHSGFPVTYR 312

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            R K  F W GM   I   +++C I  + K D++    LLQPLP+P  AWQ I++DFI+GL
Sbjct: 313  RIKQLFAWNGMKSQIKETLANCQICAQAKPDRSRYPRLLQPLPVPKGAWQTISLDFIEGL 372

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S+  N ILV+VD  +KY+HFI L+HP+T   VA+AF++NV+KLHGLP  I+SDRDK+F
Sbjct: 373  PRSSHYNCILVVVDKFSKYSHFIPLRHPFTAIDVAKAFMSNVYKLHGLPQIIISDRDKIF 432

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS  W+ LF   GT L+ S+AYH Q+DGQTER N CLE YL+C     PS W  WL+LAE
Sbjct: 433  TSQLWEQLFLRSGTKLHYSSAYHPQSDGQTERGNQCLEIYLKCFVQSAPSKWPSWLHLAE 492

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            +WYN SYH  +  + F+ALYGY P H             I T+++DR +M   +++ LH+
Sbjct: 493  YWYNNSYHSTIDRTPFEALYGYPPRHFGISIRDCDNSELI-TWMQDRKLMQQLVQQHLHR 551

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ+++KL+AD  R  R F V ++VYL+LQ Y ++SV+ R N KL+ K++GPFQ+L+K+G 
Sbjct: 552  AQQQMKLFADKKRSFRQFQVGEWVYLKLQPYVQSSVAPRANHKLAFKYFGPFQILEKLGT 611

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAY+L+LP++S IHPVFHVS LK+  G +  PS   P +  +   + +P  +L  R    
Sbjct: 612  VAYKLQLPATSSIHPVFHVSLLKEAKGFQ--PSVHTP-LSPTYSAVQYPIALLDHRLTKK 668

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRFILEDKDLLQGEAMLHTTS 186
            G   +HQVL  W+ +    ATWE + +++A +P  +   +   QGE ++ ++S
Sbjct: 669  GNHTVHQVLTHWSDTIPAQATWEDLHDLKARFPNALAWGQAKTQGEGIVRSSS 721



 Score =  174 bits (441), Expect(3) = e-164
 Identities = 100/208 (48%), Positives = 129/208 (62%), Gaps = 10/208 (4%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNY-FHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVV 2035
            +YRKF+QG+    KPL++LL+K   F  S      F+ LK ++++ PVLALP+F K FVV
Sbjct: 46   YYRKFVQGFGLKSKPLTNLLRKGVPFVWSTEADSAFQALKTSLASAPVLALPNFQKTFVV 105

Query: 2034 ESDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANF 1855
            E+DASD  +GAVL QE  PIAY +K LGPR R LSTYEKE LA+++ V  WR YLQ   F
Sbjct: 106  ETDASDYGIGAVLSQEKHPIAYISKALGPRTRGLSTYEKECLAMIMAVDHWRSYLQHVEF 165

Query: 1854 IIKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRP------ 1693
            II TDH S+ +   Q + T  QHK   KLLG  Y+I Y+KG+ N  A ALSR+P      
Sbjct: 166  IILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSTNAAADALSRKPQQSEEE 225

Query: 1692 --AIS-CIXXXXXXXSWMQDVVLRYAQD 1618
              AIS C+        W+ +V+  Y  D
Sbjct: 226  FNAISQCV------PQWLMEVLQSYDTD 247



 Score = 33.1 bits (74), Expect(3) = e-164
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W +P N+K+LRGFLGL G
Sbjct: 28   WEIPTNVKKLRGFLGLAG 45


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  435 bits (1119), Expect(2) = e-163
 Identities = 217/455 (47%), Positives = 289/455 (63%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L SQL I     P +T    ILRYKNR+Y+G+G ++R  +  S H   +GG SG  ATY 
Sbjct: 855  LESQLRITPQGHPPYTLTSGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQ 914

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            RAK  FYW GM KDI  +V  C +  +NKS+     GLL PLPIP+ AW HI+MDFI+GL
Sbjct: 915  RAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGL 974

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S+ K+VI VIVD  TKYAHF+ L HP+T   +   F+ N +K HGLP+ IVSDRD++F
Sbjct: 975  PKSDNKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIF 1034

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS  W+D+F+  G  L+ S+AYH QTDGQTERVN CLENYLRC+   KP  W   L  A+
Sbjct: 1035 TSQTWKDVFEKAGVKLHFSSAYHPQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYAK 1094

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            WWYNTS+H  L M+ +QAL+G  P  +       +         + ++++   +K SL K
Sbjct: 1095 WWYNTSFHTTLGMTPYQALHGVPPPLLAESFLSPSLFTDARNKAEAKSVITAAIKSSLLK 1154

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ R+K +AD +R ER  TV D VYL++Q YR  S+    + KL +K+YGPF+VL+++G 
Sbjct: 1155 AQARMKHFADMNRTERVLTVGDMVYLKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIGS 1214

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAY+L LP+SS+IHPVFHVS+LKKHIG K  P   LP+ D +G ++  P  VL+ R +  
Sbjct: 1215 VAYKLLLPASSQIHPVFHVSQLKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQ 1274

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRF 240
               P+ Q  +QW +     ATWE  + I   +P F
Sbjct: 1275 NNAPVVQWKVQWANLPLSAATWEDAAFISKVFPAF 1309



 Score =  169 bits (429), Expect(2) = e-163
 Identities = 86/199 (43%), Positives = 129/199 (64%), Gaps = 1/199 (0%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YRKF++ +  I KPL   LKK  F         F  +K  +++ PVLA+P+FT+ F++E
Sbjct: 651  YYRKFIKDFGLICKPLFTALKKTGFTWQDEQQQAFATIKDKLAHAPVLAMPNFTQPFILE 710

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DAS   +GAVL+Q  +P+AYF+K +GP+   LSTY+KE LAI+  ++ W+HY  G + I
Sbjct: 711  ADASGTGLGAVLMQNNRPLAYFSKAIGPKAAGLSTYDKEALAILEALKKWKHYFLGTSLI 770

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPAIS-CIX 1675
            I+TD  S++Y   Q +T  +QHK LIKLL +DY+I+YKKG EN  A ALSR P+++    
Sbjct: 771  IRTDQASLKYINEQRLTEGIQHKLLIKLLSYDYKIEYKKGKENKAADALSRIPSVAQLFS 830

Query: 1674 XXXXXXSWMQDVVLRYAQD 1618
                  +W+ +++  YA D
Sbjct: 831  TTIIVPTWITEILASYATD 849


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  420 bits (1079), Expect(3) = e-161
 Identities = 213/456 (46%), Positives = 304/456 (66%), Gaps = 1/456 (0%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            +I+ L  + DS  +F++ + ILR K++I + +  N+++ IL  LH   VGG SG   T+ 
Sbjct: 1045 IITALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKNTILLWLHGSGVGGHSGRDVTHQ 1104

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            R K  FYW+GM+KDI  ++  C    + KSD     GLLQPLPIPD  W  ++MDFI+GL
Sbjct: 1105 RVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPLPIPDTIWSEVSMDFIEGL 1164

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
             VS  K VI+V+VD L+K AHFI L HPY+  +VA A+L NVFKLHG P+SIVSDRD VF
Sbjct: 1165 PVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVSDRDVVF 1224

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS FW++ F   G +L +++AYH Q+DGQTE VN CLE YLRC+C  +P  WS+WL LAE
Sbjct: 1225 TSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAE 1284

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPS-HMDFLTTVATYVAAIETYLKDRAIMLDPLKESLH 708
            +WYNT+YH   +M+ F+ +YG  P  H+ +L    + VA +   L++R  ML  LK  L 
Sbjct: 1285 YWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPG-ESKVAVVARSLQEREDMLLFLKFHLM 1343

Query: 707  KAQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVG 528
            +AQ R+K +AD  R ER F + D+VY++LQ YR+ SV  R N KLS K++GP++++ + G
Sbjct: 1344 RAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCG 1403

Query: 527  VVAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVL 348
             VAY+L LPS S++HPVFHVS+LK  +G   T +  LP V Q  V    PEKV++ + V 
Sbjct: 1404 EVAYKLALPSYSQVHPVFHVSQLKVLVGNVST-TVHLPSVMQD-VFEKVPEKVVERKMVN 1461

Query: 347  IGQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRF 240
               + + +VL++W++   ++ATWE + +++ ++P F
Sbjct: 1462 RQGKAVTKVLVKWSNEPLEEATWEFLFDLQKTFPEF 1497



 Score =  171 bits (434), Expect(3) = e-161
 Identities = 87/171 (50%), Positives = 116/171 (67%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YR+F++ +  I  PL  L K + F  +      FE LK A+   PVL+LP F KQFVVE
Sbjct: 840  YYRRFVRSFGVIAGPLHALTKTDAFEWTAVAQQAFEDLKAALCQAPVLSLPLFDKQFVVE 899

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DA    +GAVL+QEG P+AY ++ L  +   LS YEKE LA++  V+ WRHYL  ++FI
Sbjct: 900  TDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFI 959

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSR 1699
            IKTD +S++Y L Q + T +Q +WL KLL FDYEIQY++G ENVVA ALSR
Sbjct: 960  IKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADALSR 1010



 Score = 29.3 bits (64), Expect(3) = e-161
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W  P  +K+LRGFLGL G
Sbjct: 822  WPQPTTLKQLRGFLGLAG 839


>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
          Length = 1602

 Score =  417 bits (1073), Expect(3) = e-160
 Identities = 207/469 (44%), Positives = 296/469 (63%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L+S L I+ +   H+     I+RYKNRI++G+   ++  ++  LHA  VGG SG   TY 
Sbjct: 1068 LLSTLAIHPEKHIHYFLDNGIIRYKNRIWVGNNPELQLKLIRELHASPVGGHSGFPVTYR 1127

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            + K  F W  M K I   V  C +  + K D+    GLLQPLP+P+ +WQ +++DFI+GL
Sbjct: 1128 KIKQLFAWPNMKKMIKESVQRCQVCLQAKPDRLKYPGLLQPLPVPEGSWQAVSLDFIEGL 1187

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S   N ILV+VD  +KYAHF+ L+HP+T   VAQA++ +++KLHGLP +IVSDRDK+F
Sbjct: 1188 PKSAGYNCILVVVDRFSKYAHFVALKHPFTAIDVAQAYMFHIYKLHGLPQTIVSDRDKIF 1247

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS  W+ LF   GT L+ S+AYH Q+DGQTERVN CLE YLRC     PS W  WL+LAE
Sbjct: 1248 TSQLWEQLFLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLHLAE 1307

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            +WYN++YH  L  + F+ LYGY P+H   +++    +  +  +L+DR  M   +++ LH+
Sbjct: 1308 YWYNSTYHSSLGTTPFEVLYGYPPNHFG-ISSRDCAIPELSVWLRDRKFMQQLVQQHLHR 1366

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ+++K +AD  R  R FT+ D+VYL+LQ Y ++SV+ R N KL+ K+YGPFQV+ K+G 
Sbjct: 1367 AQQQMKHFADKKRSFRQFTIGDWVYLKLQPYVQSSVAPRANHKLAFKYYGPFQVIDKLGT 1426

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAY+L+LP +S +HPVFHVS LK   G        LP      V    P  +L  R    
Sbjct: 1427 VAYKLQLPETSSVHPVFHVSLLKPAKGFTQPAFLQLP---SEVVSWQLPLAILDQRLAKK 1483

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRFILEDKDLLQGEAML 198
            G   I QVLI W+H+  + ATWE + +++  +P  +   +  +QGE ++
Sbjct: 1484 GNSVITQVLIHWSHTVPEQATWEDLEDLKTRFPNALAWGQAKIQGEGIV 1532



 Score =  170 bits (430), Expect(3) = e-160
 Identities = 96/211 (45%), Positives = 126/211 (59%), Gaps = 4/211 (1%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHL-SLATTIIFEKLKLAMSNTPVLALPDFTKQFVV 2035
            +YRKF++ +  I KPL+ LL+K   ++ +  T   F  LK A+++ PVL+LPDF K F V
Sbjct: 861  YYRKFVKNFGIISKPLTQLLRKGVPYVWTTETDNAFHTLKQALASAPVLSLPDFQKTFTV 920

Query: 2034 ESDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANF 1855
            E+DASD  +GAVL Q+  PIAY +K LGPR R LSTYEKE +AI+L V  WR YLQ   F
Sbjct: 921  ETDASDCGIGAVLSQDKHPIAYVSKALGPRTRGLSTYEKECMAILLAVDHWRSYLQHGEF 980

Query: 1854 IIKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPAIS--- 1684
            II TDH S+ +   Q + T  QHK   KLLG  Y+I Y+KG+ N  A ALSR+   S   
Sbjct: 981  IILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSSNAAADALSRKFQDSNSE 1040

Query: 1683 CIXXXXXXXSWMQDVVLRYAQDQGIVAYIST 1591
                      W+ +V   Y +D      +ST
Sbjct: 1041 IFAISSSVPQWLMEVTQGYEKDAQAAKLLST 1071



 Score = 29.3 bits (64), Expect(3) = e-160
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W +P + K+LRGFLGL G
Sbjct: 843  WAVPVSTKKLRGFLGLAG 860


>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1619

 Score =  414 bits (1064), Expect(2) = e-159
 Identities = 203/474 (42%), Positives = 299/474 (63%), Gaps = 2/474 (0%)
 Frame = -3

Query: 1601 ISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYVR 1422
            +  L IN  ++P FT K  +L +K++++IG+   V+  IL +LH   +GG SG+  TY R
Sbjct: 1107 VQTLCINNSAIPDFTLKNGLLYFKDKMWIGNNPIVQRKILANLHTAAIGGHSGITMTYQR 1166

Query: 1421 AKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGLL 1242
             K  F W G+  D++ F+ HC I  + K +     G+LQPLP+P+Q+WQ +++DFI+GL 
Sbjct: 1167 IKQLFAWIGLRSDVVKFIQHCTICQQAKGEHVKYPGMLQPLPVPEQSWQIVSLDFIEGLP 1226

Query: 1241 VSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVFT 1062
             S+  N ILV+VD  +KYAHF+ L HP+T   VA+A++ ++ +LHGLP +I+SD+D++FT
Sbjct: 1227 RSSTFNCILVVVDKFSKYAHFVALAHPFTTLEVAEAYMQHIHRLHGLPEAIISDQDRIFT 1286

Query: 1061 SHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAEW 882
            S+ W  LF+  GT L MS++YH Q+D QTER+N CL+ +LRC     PS WS+WL LAE+
Sbjct: 1287 SNLWTTLFRLAGTQLRMSSSYHPQSDRQTERMNQCLKTFLRCFVHASPSQWSRWLALAEY 1346

Query: 881  WYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHKA 702
            WYNTS+H  L  + F+ LYG+ P +     + A     +  +L +R  M   ++E L +A
Sbjct: 1347 WYNTSFHSSLGTTPFEVLYGHKPRYFGLTASAACSAPELSDWLHERDKMQTLIREHLLRA 1406

Query: 701  QERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGVV 522
            Q R+K  ADT   ERSF V D+VY++LQ + + SV    N KLS +FYGPFQVL KVG V
Sbjct: 1407 QMRMKHQADTKHSERSFAVGDWVYMKLQPFVQQSVVTCTNRKLSFRFYGPFQVLAKVGSV 1466

Query: 521  AYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLIG 342
            AYRL+LP S  IHPV HVS+L K +       + LP++D +  V   P++V+  R+V  G
Sbjct: 1467 AYRLDLPPSCLIHPVIHVSQLNKAVAPSDQVHSKLPILDDADAVTPVPQQVIDRRSVHKG 1526

Query: 341  QQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRFILEDKDLLQ--GEAMLHTTS 186
             + + QVLI+W+   +   TWE +  ++  +P+    ++   Q  G  M  TTS
Sbjct: 1527 AKMVEQVLIRWSGPDSAVVTWENLQELQQRFPQTKAWEQASFQGRGNVMACTTS 1580



 Score =  179 bits (454), Expect(2) = e-159
 Identities = 100/211 (47%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNY-FHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVV 2035
            +YRKF++ +  I KPL++LL+K   F  +  T   F  LK  + + PVLALPDF+  FVV
Sbjct: 899  YYRKFVKNFGIISKPLTNLLRKGQLFAWTSMTNEAFLTLKHTLVSAPVLALPDFSIPFVV 958

Query: 2034 ESDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANF 1855
            E+DASD  +GAVL+Q   P+A+ +K LGPR   LSTYEKE LAI+L +  WR YLQ A F
Sbjct: 959  ETDASDKGIGAVLMQRNHPVAFLSKALGPRHLGLSTYEKESLAIMLAIDHWRPYLQHAEF 1018

Query: 1854 IIKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRP---AIS 1684
             I+TDH+S+ +   Q +TT  QHK L KLLG  Y+I YKKG+EN  A ALSR P    + 
Sbjct: 1019 SIRTDHRSLAFLDEQRLTTPWQHKALTKLLGLQYKILYKKGSENSAADALSRYPDKETVV 1078

Query: 1683 CIXXXXXXXSWMQDVVLRYAQDQGIVAYIST 1591
                      W Q+V+  YAQD   ++ + T
Sbjct: 1079 LSALSVCIPEWTQEVIEGYAQDSDSLSKVQT 1109


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  421 bits (1082), Expect(2) = e-159
 Identities = 210/455 (46%), Positives = 285/455 (62%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L S L I   S P +T K  ILRYK+ I +G+G  +R+ +L S H   +GG SG  ATY 
Sbjct: 189  LESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQ 248

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            R K  FYW GM   +  FV  C +  +NK++     GLLQPLP+P+ AW HITMDF++GL
Sbjct: 249  RMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGL 308

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S  K+VI VIVD  TKYAHFI L HP+T   +   FL + +KLHGLP+ IVSDRD++F
Sbjct: 309  PKSEGKDVIWVIVDRFTKYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIF 368

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS  W+++F+  G  L+ S+AYH QTDGQ+ERVN CLENYLRC+   KP  W   L  AE
Sbjct: 369  TSSTWKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAE 428

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            WWYNT++H  L MS +QAL+G  P  +  L    + +       + +A +L+ +K  L K
Sbjct: 429  WWYNTTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVK 488

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ R+K +AD  R ER+  V D VYL++Q YR  S+    + KL +++YGPF+VL+++G 
Sbjct: 489  AQARMKYFADQHRQERTLEVGDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGS 548

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAY+L LP +S+IH VFHVS+LKKH+G +  P   LP++D  G ++  P  VL  R +  
Sbjct: 549  VAYKLLLPVTSQIHHVFHVSQLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPR 608

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRF 240
              +P+ Q  I W +     ATWE  + I   +P F
Sbjct: 609  NNEPVVQWKIHWANLPESAATWEDAAFITKVFPSF 643



 Score =  171 bits (433), Expect(2) = e-159
 Identities = 84/181 (46%), Positives = 118/181 (65%)
 Frame = -2

Query: 2160 DLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVESDASDLCVGAVLLQEGK 1981
            D LKKN FH        F+ +KL ++  PVLA+PDF+  F++E+DAS   +GAVL+Q G+
Sbjct: 3    DALKKNNFHWQEVQQQAFDAIKLQLAQAPVLAMPDFSLPFILEADASGHGIGAVLMQNGR 62

Query: 1980 PIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFIIKTDHQSIQYFLTQNIT 1801
            P+AY +K +GP+  ALSTY+KE LAI+  ++ W+HY  G + II+TD  S++Y   Q IT
Sbjct: 63   PLAYLSKAIGPKAAALSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRIT 122

Query: 1800 TVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPAISCIXXXXXXXSWMQDVVLRYAQ 1621
              VQHK LIKLL +DY+I+YKKG EN  A ALSR   ++ +        W+ +V   Y+ 
Sbjct: 123  EGVQHKLLIKLLSYDYKIEYKKGQENKAADALSRMQQLNALTTTVIVPQWITEVAASYST 182

Query: 1620 D 1618
            D
Sbjct: 183  D 183


>ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648418 [Zea mays]
          Length = 1853

 Score =  404 bits (1039), Expect(3) = e-159
 Identities = 212/467 (45%), Positives = 284/467 (60%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L+++L ++      ++  + ++R    I++G    +R  ++ ++H    GG SGMHATY 
Sbjct: 1148 LLARLCVHNPDEHGYSLSQGVIRKGGLIWVGQNSALRTKLVAAVHDSAAGGHSGMHATYH 1207

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            R K  F W+GM  D+  FV  C I  + K ++ +  GLL PLPIP  AWQ ITMDFI+ L
Sbjct: 1208 RLKKLFVWKGMKSDVADFVQQCQICQQAKGERVHPAGLLHPLPIPQGAWQDITMDFIEKL 1267

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S   + ILV+VD  TKYAHFI L+HP+T + VAQ  L  V +LHGLP SIVSDRDK+F
Sbjct: 1268 PQSGGCDTILVVVDRFTKYAHFIALKHPFTASQVAQVILDQVVRLHGLPKSIVSDRDKIF 1327

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS FW  LFK LGT LN+STAYH QTDGQ+ERVN C+E YLRC    +P+ W  WL LAE
Sbjct: 1328 TSAFWTQLFKILGTKLNLSTAYHPQTDGQSERVNQCVEMYLRCAVHAQPTKWKTWLSLAE 1387

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            +WYNTSYH  L  S F+ LYGY P      +  +   A +   L +RA     L+E L  
Sbjct: 1388 FWYNTSYHTSLACSPFKVLYGYDPPFAAAPSVPSDTAADVAQVLVERAQFTAMLREQLAA 1447

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ R+KL AD  R +R F V D V L+LQ Y + SV  R   KL+ KF+GP++++++VG 
Sbjct: 1448 AQNRMKLRADRLRTDRQFQVGDMVLLKLQPYAQHSVVSRPCPKLAFKFFGPYKIVERVGA 1507

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAYRLELP+S+++HPVFHVS+LK  I       + LP         + P ++L  R V  
Sbjct: 1508 VAYRLELPASAQVHPVFHVSQLKPFIPDYTPVFSNLPAYSDLSSRNVQPLEILDRRLVKK 1567

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRFILEDKDLLQGEA 204
            G + + QVLI+W+       TWE  + +R  YP  I   +  L+G A
Sbjct: 1568 GNRAVPQVLIRWSLLPDDATTWEDYNVLRQRYPNAIAWGQASLEGGA 1614



 Score =  178 bits (452), Expect(3) = e-159
 Identities = 90/199 (45%), Positives = 134/199 (67%), Gaps = 1/199 (0%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YR+F+QGY AI +PL+ LL+K  F  +    + F++LK AM +TPVLALPDF   FVVE
Sbjct: 944  YYRRFVQGYGAIARPLTRLLQKGAFQWTSEAEMAFQRLKQAMVSTPVLALPDFNIPFVVE 1003

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            +DA D  VGAVL+Q G+PIA+ +K LG + + LS YEKEF+A+++ V  WRHYLQ + F 
Sbjct: 1004 TDACDDGVGAVLMQRGRPIAFLSKALGIKSQKLSIYEKEFIALIMAVDHWRHYLQRSEFE 1063

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPAISCI-X 1675
            I+TDH+++ +  +Q++ + +Q K + KL+G  +++ YK+G +N VA ALSR  A+  +  
Sbjct: 1064 IRTDHKALSFLGSQDLHSELQRKAMAKLMGLQFKVVYKQGKDNKVADALSRVGAVMALTA 1123

Query: 1674 XXXXXXSWMQDVVLRYAQD 1618
                   W+Q+V   Y  D
Sbjct: 1124 VSEVQPLWIQEVTNSYVTD 1142



 Score = 31.2 bits (69), Expect(3) = e-159
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W  P N+ +LRGFLGLTG
Sbjct: 926  WPKPLNVTDLRGFLGLTG 943


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  407 bits (1047), Expect(3) = e-158
 Identities = 205/454 (45%), Positives = 288/454 (63%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L+++L I+ +S   +   + IL+YK +I++G+   ++  +++ LHA  +GG SG   TY 
Sbjct: 1084 LLAELAISPNSRKDYQLCQGILKYKGKIWVGNNTALQHKLVNELHATPLGGHSGFPVTYR 1143

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            + KS F W GM K I   +  C +  + K D+    GLLQPLP+P  AWQ I++DFI+GL
Sbjct: 1144 KVKSLFAWPGMKKLIKEQLQSCQVCLQAKPDRARYPGLLQPLPVPAGAWQTISLDFIEGL 1203

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S+  N ILV+VD  +KY+HFI L HP+    VAQ F+ N++KLHGLP +I+SDRDK+F
Sbjct: 1204 PRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRAIISDRDKIF 1263

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS FW  LF   GT L+MS+AYH Q+DGQTERVN CLE YLRC     P  WS WLYLAE
Sbjct: 1264 TSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAPHKWSSWLYLAE 1323

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            +WYNTS+H  L  + F+ LYGY PSH   +      +A +  +  +R  M   L++ L++
Sbjct: 1324 FWYNTSFHSTLNKTPFEVLYGYTPSHFG-IGLDDCQIADLHEWHTERKFMQQLLQQHLNR 1382

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ+++K  AD  R  R F V D+VYL+LQ Y +  V+QR   KL+ ++YGPFQV+ +VG 
Sbjct: 1383 AQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQTFVAQRACHKLAFRYYGPFQVMSRVGT 1442

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAY ++LP++S IHPVFHVS+LK  +G        LP    S   +  P + L  R V  
Sbjct: 1443 VAYHIQLPATSSIHPVFHVSQLKAAVGFSKKVQDELPT---SLGALQVPFQFLDKRLVKK 1499

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPR 243
            G + + Q+L  W HSS  ++TWE + ++ A +PR
Sbjct: 1500 GNRSVLQLLTHWYHSSPSESTWEDMEDLFARFPR 1533



 Score =  174 bits (440), Expect(3) = e-158
 Identities = 96/201 (47%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNY-FHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVV 2035
            +YRKF++ +  I KPL+ LLKK   F  +      F++LK A+   PVLALPDF+K F +
Sbjct: 878  YYRKFVRHFGLISKPLTQLLKKGIPFKWTPEIESAFQQLKQALVAAPVLALPDFSKHFTI 937

Query: 2034 ESDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANF 1855
            E+DASD+ +GAVL QE  PIAY ++ LGP+ R LSTYEKE++AI+L V+ WR YLQ   F
Sbjct: 938  ETDASDVGIGAVLSQEKHPIAYLSRALGPKTRGLSTYEKEYMAIILAVEHWRPYLQQGEF 997

Query: 1854 IIKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRR--PAISC 1681
            II TDH S+ +   Q + T  Q K   KLLG  Y+I Y+KG  N  A ALSRR  P    
Sbjct: 998  IILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQYKICYRKGVSNAAADALSRRESPISEV 1057

Query: 1680 IXXXXXXXSWMQDVVLRYAQD 1618
                    SWMQ+++  Y  D
Sbjct: 1058 AAISECIPSWMQELMQGYQLD 1078



 Score = 30.0 bits (66), Expect(3) = e-158
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 2267 TWTLPKNIKELRGFLGLTG 2211
            +W  P  IK+LRGFLGL G
Sbjct: 859  SWPQPTTIKKLRGFLGLAG 877


>ref|XP_007216306.1| hypothetical protein PRUPE_ppa019597mg, partial [Prunus persica]
            gi|462412456|gb|EMJ17505.1| hypothetical protein
            PRUPE_ppa019597mg, partial [Prunus persica]
          Length = 1392

 Score =  385 bits (988), Expect(3) = e-158
 Identities = 199/448 (44%), Positives = 273/448 (60%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            LIS L  +  + PH++++   L YK R+++      R  IL   H+  +GG SG   TY 
Sbjct: 956  LISLLQADPTAKPHYSWQNNCLYYKERVFVPVSSQWRTMILEEFHSTPMGGHSGQLRTYK 1015

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            R   +F W  + KD+  FV+ CD   R   +  +  GLLQPLPIPD  WQ I MDF++GL
Sbjct: 1016 RILRNFRWPRLKKDVQAFVAACDTCQRQNYEALHPPGLLQPLPIPDSIWQDIAMDFVEGL 1075

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
               N KN ILV+VD L+KY HFI ++HPYT + VA  F+  VFKLHG+P +IVSDRD  F
Sbjct: 1076 PSVNGKNAILVVVDRLSKYGHFIPIKHPYTASQVADFFICEVFKLHGMPRTIVSDRDPTF 1135

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS FW   F   GT L      H+        +N  LE+YLRC  G KP+SW  WL  AE
Sbjct: 1136 TSQFWTSFFTHQGTKL-----CHI--------LNRTLEHYLRCFVGDKPTSWVSWLPWAE 1182

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            WWYNT+YH  +KM+ +QA+YG  P  ++F T+ ++ V A++  L+DR  +L  L++++  
Sbjct: 1183 WWYNTTYHSAIKMTPYQAVYGQPPPSVEFYTSGSSAVQAVDLALRDRDTLLRRLRQNMQI 1242

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQER+  +A+  R ER F V+D+V+LRLQ YR++++      KLS +FYGP+++L K+G 
Sbjct: 1243 AQERMTFFANHKRSERHFDVDDWVFLRLQPYRQSTMGTSNCPKLSPRFYGPYKILAKIGE 1302

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
             AY+L LPS S+IH VFHVS LKK IG   T S TLP +     V   P K+L       
Sbjct: 1303 RAYKLALPSGSKIHNVFHVSLLKKKIGAHLTSSPTLPPLRPDSSVHWTPAKILNRGLFKR 1362

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNI 261
              QP+ + LIQW+    +DATWE  ++I
Sbjct: 1363 RNQPVVRWLIQWSGLPEEDATWEDATDI 1390



 Score =  197 bits (501), Expect(3) = e-158
 Identities = 100/178 (56%), Positives = 129/178 (72%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVVE 2032
            +YRKF+  +  I KPL+DLL+K+ FH S A    F+ LK A++ TPVL LPDF+KQFVVE
Sbjct: 752  YYRKFVHHFGTISKPLTDLLRKDNFHWSPAADSAFQALKTALTTTPVLRLPDFSKQFVVE 811

Query: 2031 SDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANFI 1852
            SDAS+  VGA+L QE +PIAY +K L  R R+LS Y+KE LA+VL VQ WR YL G  F 
Sbjct: 812  SDASNNGVGAILSQEQRPIAYLSKSLSERHRSLSVYDKEMLAVVLAVQQWRPYLLGRQFK 871

Query: 1851 IKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPAISCI 1678
            I TDHQ+I++FL Q ITT  Q KWL+KLLG++YEI+Y+ G++N    ALSR+  +  I
Sbjct: 872  IVTDHQTIKHFLEQRITTPTQEKWLLKLLGYNYEIEYRAGSKNAGPDALSRKSELLAI 929



 Score = 28.9 bits (63), Expect(3) = e-158
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W  P+ +K LRGFLGL G
Sbjct: 734  WPRPETVKGLRGFLGLAG 751


>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
            gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  413 bits (1061), Expect(3) = e-158
 Identities = 199/452 (44%), Positives = 287/452 (63%)
 Frame = -3

Query: 1601 ISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYVR 1422
            +  L IN  +VP+F+ +  +L ++NR+++G   +V+  IL +LH   VGG SG+  TY R
Sbjct: 1126 VQTLCINSGAVPNFSLRNGVLYFQNRLWVGHNVDVQQRILANLHTAAVGGHSGIQVTYQR 1185

Query: 1421 AKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGLL 1242
             K  F W  +   ++ +V  C +  + KS+     G+LQPLP+PD AWQ +++DF++GL 
Sbjct: 1186 VKQLFAWPRLRATVVQYVQACSVCQQAKSEHVKYPGMLQPLPVPDHAWQIVSLDFVEGLP 1245

Query: 1241 VSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVFT 1062
             S   N ILV+VD  +KY+HF+ L HP++   VA+A++ ++ +LHGLP S++SDRD++FT
Sbjct: 1246 KSASFNCILVVVDKFSKYSHFVPLTHPFSALDVAEAYMQHIHRLHGLPQSLISDRDRIFT 1305

Query: 1061 SHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAEW 882
            S  W  LF+  GT L MS++YH QTDGQTERVN CLE +LRC     PS WS+WL LAE+
Sbjct: 1306 STLWTTLFRLAGTQLRMSSSYHPQTDGQTERVNQCLETFLRCFVHACPSQWSRWLALAEY 1365

Query: 881  WYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHKA 702
            WYNTS+H  L  + F+ LYG+ P +     + A     +  +L +R  M   +++ L +A
Sbjct: 1366 WYNTSFHSALGTTPFEVLYGHKPRYFGLSASAACRSDDLVEWLHEREKMQALIRDHLLRA 1425

Query: 701  QERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGVV 522
            Q R+K  AD  R ERSF V D+VYL+LQ + + SV  R N KLS +FYGPFQVL KVG V
Sbjct: 1426 QTRMKQQADQHRSERSFAVGDWVYLKLQPFVQQSVVTRANRKLSFRFYGPFQVLDKVGTV 1485

Query: 521  AYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLIG 342
            AYRL+LPSSS IHPV HVS+LKK +       + LPV+D +    + P ++L  R +  G
Sbjct: 1486 AYRLDLPSSSLIHPVVHVSQLKKALAPTEQVHSPLPVLDPTNATHVCPAQILDRRFIRKG 1545

Query: 341  QQPIHQVLIQWTHSSAKDATWEAVSNIRASYP 246
             + + Q+ ++WT  +    TWE    +R  +P
Sbjct: 1546 SKLVEQIQVRWTGDAPAATTWENPQELRRRFP 1577



 Score =  168 bits (425), Expect(3) = e-158
 Identities = 93/211 (44%), Positives = 127/211 (60%), Gaps = 4/211 (1%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNYFHLSLATTI-IFEKLKLAMSNTPVLALPDFTKQFVV 2035
            +YRKF++ Y  + KPL++LL+K   ++  A T   F+ LK A+    VLA+PDF   FVV
Sbjct: 918  YYRKFVRNYGILSKPLTNLLRKGQLYIWTAETEDAFQALKQALITALVLAMPDFQTPFVV 977

Query: 2034 ESDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANF 1855
            E+DASD  +GAVL+Q   P+A+ ++ LG R   LSTYEKE LAI+L V  WR YLQ   F
Sbjct: 978  ETDASDKGIGAVLMQNNHPLAFLSRALGLRHPGLSTYEKESLAIMLAVDHWRPYLQHDEF 1037

Query: 1854 IIKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRRPA---IS 1684
             I+TDH+S+ +   Q +TT  QHK L KLLG  Y+I +KKG +N  A ALSR P    + 
Sbjct: 1038 FIRTDHRSLAFLTEQRLTTPWQHKALTKLLGLRYKIIFKKGIDNSAADALSRYPGSDRVE 1097

Query: 1683 CIXXXXXXXSWMQDVVLRYAQDQGIVAYIST 1591
                      W+ D+V  Y+ D    + + T
Sbjct: 1098 LSALSVAVPEWINDIVAGYSSDPDACSKVQT 1128



 Score = 29.6 bits (65), Expect(3) = e-158
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W  P ++KELR FLGL+G
Sbjct: 900  WPAPTSVKELRSFLGLSG 917


>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
          Length = 933

 Score =  416 bits (1070), Expect(3) = e-157
 Identities = 201/465 (43%), Positives = 306/465 (65%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L++ L +N  S PH++  + ++++K ++++G+  N++  I+ +LH   +GG SG   TY 
Sbjct: 424  LLTGLAVNPSSYPHYSLSKGLIKHKGKVWVGNNSNIQQQIISALHDSPLGGHSGFPVTYK 483

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            R KS F W  M   +   ++ C +  + K D++   GLLQPLP+PD AWQ I+MDFI+GL
Sbjct: 484  RIKSLFSWPHMKLTVQKQLASCAVCLQAKPDRSKYPGLLQPLPVPDGAWQIISMDFIEGL 543

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S  ++ ILV+VD  +KYAHF+ L HP++   VA+ F+ NV+KLHGLP  I+SDRDK+F
Sbjct: 544  PKSYHQDCILVVVDKFSKYAHFMPLSHPFSALDVAKVFMLNVYKLHGLPQIIISDRDKIF 603

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS  W+ LF   GT L++S+AYH Q+DGQTERVN CLE +LRC     P+ WS WL+LAE
Sbjct: 604  TSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATPAKWSLWLHLAE 663

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            +WYN+SYH  L  + F+ LYGY PSH   +   A  ++ ++++L +R +M   L++ L++
Sbjct: 664  FWYNSSYHSALNKTPFEVLYGYPPSHFG-IRADACVISDLDSWLSERHLMTQLLRQHLNR 722

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
            AQ+ +K  AD  R  RSF V D+V+L+LQ Y ++SV++R N KLS +++GP+Q+L KVG 
Sbjct: 723  AQQVMKTQADKKRSFRSFQVGDWVFLKLQPYVQSSVAKRANHKLSFRYFGPYQILSKVGS 782

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAY+L+LP+ S +HPVFHVS+LK     KH+  + LP +      I +P ++L +R    
Sbjct: 783  VAYKLQLPADSMVHPVFHVSQLKGTQNFKHSIQSQLPNITDH---IQYPVQILDTRIQKK 839

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRFILEDKDLLQG 210
            G + + Q+L+ W++  A +ATWE    ++  +P  +   +  LQG
Sbjct: 840  GNKVVRQILVCWSNLPAVEATWEDEEELKQRFPSALPWGQVSLQG 884



 Score =  160 bits (405), Expect(3) = e-157
 Identities = 88/202 (43%), Positives = 122/202 (60%), Gaps = 4/202 (1%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNY-FHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVV 2035
            +YRKF++ +  + KPL+ LLKK+  F  S      F+ LK A+++TPVLALP+F + F +
Sbjct: 217  YYRKFVKDFGTLSKPLTQLLKKDAPFVWSAEVNQAFQALKHALTSTPVLALPNFQQGFTI 276

Query: 2034 ESDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANF 1855
            E+DASD+ +GAVL Q   P+A+ +K LGPR + LSTYEKE LAI++ V  WR YLQ   F
Sbjct: 277  ETDASDIGIGAVLSQNQHPVAFVSKALGPRTQGLSTYEKECLAIMMAVDHWRPYLQFQEF 336

Query: 1854 IIKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSR---RPAIS 1684
            +I TDH S+ +   Q + T  Q K   KL G  ++I Y+KG  N  A ALSR        
Sbjct: 337  LIITDHHSLMHLTEQRLHTPWQQKAFTKLSGLQFQIVYRKGKHNAAADALSRHVPEETSE 396

Query: 1683 CIXXXXXXXSWMQDVVLRYAQD 1618
             +        W+QD++  Y QD
Sbjct: 397  FLGISTCSPVWLQDILHGYDQD 418



 Score = 30.4 bits (67), Expect(3) = e-157
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W +P  +K+LRGFLGL G
Sbjct: 199  WAVPTTLKKLRGFLGLAG 216


>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1923

 Score =  406 bits (1044), Expect(3) = e-156
 Identities = 199/469 (42%), Positives = 300/469 (63%)
 Frame = -3

Query: 1604 LISQLLINVDSVPHFTYKERILRYKNRIYIGSGGNVRDNILHSLHAFVVGGQSGMHATYV 1425
            L+++L ++  +  HF   + +LRYK +I+IG   +++  ++ +LHA  +GG SG   TY 
Sbjct: 521  LLTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLVTALHASPIGGHSGFPVTYQ 580

Query: 1424 RAKSHFYWQGMLKDILLFVSHCDIFHRNKSDQTNVVGLLQPLPIPDQAWQHITMDFIDGL 1245
            R K+ F W  M K I  +V +C I  + K D     GLLQPLPIP+ AWQ +++DFI+GL
Sbjct: 581  RVKALFAWPQMKKMIQQWVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGL 640

Query: 1244 LVSNRKNVILVIVDMLTKYAHFIGLQHPYTDASVAQAFLTNVFKLHGLPSSIVSDRDKVF 1065
              S R N ILV+VD  ++YAHF+ L HP++   VA +++ N++KLHG+P  ++SDRDK+F
Sbjct: 641  PKSERYNCILVVVDKFSRYAHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDRDKIF 700

Query: 1064 TSHFWQDLFKALGTSLNMSTAYHLQTDGQTERVNACLENYLRCICGHKPSSWSQWLYLAE 885
            TS  W+ LF   G +L++S+AYH Q+DGQT+RVN CLE +LRC     P  W  WL+LA 
Sbjct: 701  TSKLWEFLFLKSGIALHLSSAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLHLAG 760

Query: 884  WWYNTSYHRGLKMSQFQALYGYAPSHMDFLTTVATYVAAIETYLKDRAIMLDPLKESLHK 705
            +WYNT +H  L  + F+ LYG+ P  +  +T     +  +  +L +R +M + L++ LH+
Sbjct: 761  YWYNTCFHSALNKTPFEVLYGHNPLQLG-VTMETCAIPDLAVWLHERKLMAELLQQHLHR 819

Query: 704  AQERVKLYADTSRVERSFTVEDFVYLRLQTYRKASVSQRKNFKLSTKFYGPFQVLQKVGV 525
             Q+++K +AD +R  R F V D+V+L+LQ Y + SV+ R   KL+ KFYGPFQ+L +VG 
Sbjct: 820  VQQKMKFHADKNRSFREFAVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILARVGT 879

Query: 524  VAYRLELPSSSRIHPVFHVSELKKHIGLKHTPSTTLPVVDQSGVVILFPEKVLQSRTVLI 345
            VAY+L+LP  S IHPVFHVS+LK   G KH   + LP   +S V   +P ++L  R +  
Sbjct: 880  VAYKLQLPDDSTIHPVFHVSQLKVAHGFKHQVQSRLPKFLKSTV---YPLQILDQRLIRK 936

Query: 344  GQQPIHQVLIQWTHSSAKDATWEAVSNIRASYPRFILEDKDLLQGEAML 198
            G + + QVL+ W+ S A+DATWE   +++  +P  +   +   QGE ++
Sbjct: 937  GNRTVSQVLVYWSDSVAEDATWEDREDLQQRFPMALAWGQATFQGEGVV 985



 Score =  166 bits (421), Expect(3) = e-156
 Identities = 85/173 (49%), Positives = 114/173 (65%), Gaps = 1/173 (0%)
 Frame = -2

Query: 2211 HYRKFMQGYVAIGKPLSDLLKKNY-FHLSLATTIIFEKLKLAMSNTPVLALPDFTKQFVV 2035
            +YRKF++ +  I KPL+ LLKK   F  +      F  LK A+ + PVLALPDF+K F V
Sbjct: 314  YYRKFVRNFGTINKPLTQLLKKGVPFKWTAQMDEAFNALKQALVSAPVLALPDFSKTFTV 373

Query: 2034 ESDASDLCVGAVLLQEGKPIAYFNKPLGPRDRALSTYEKEFLAIVLDVQIWRHYLQGANF 1855
            E+DA D+ +GAVL Q+  PIA+ +K LGP+ R LSTYEKE+LAI+L V  WR YLQ   F
Sbjct: 374  ETDACDMGIGAVLSQDRHPIAFVSKALGPKTRGLSTYEKEYLAILLAVDQWRSYLQHDEF 433

Query: 1854 IIKTDHQSIQYFLTQNITTVVQHKWLIKLLGFDYEIQYKKGAENVVAGALSRR 1696
            +I TDH ++ +   Q + T +QHK   KL+G  Y++ Y++G  N  A ALSRR
Sbjct: 434  VILTDHHNLMHITDQRLHTPLQHKAFTKLMGLQYKVCYRRGTSNAAADALSRR 486



 Score = 32.3 bits (72), Expect(3) = e-156
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -3

Query: 2264 WTLPKNIKELRGFLGLTG 2211
            W +P+++K+LRGFLGL G
Sbjct: 296  WKIPQSVKQLRGFLGLAG 313