BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00016091
         (2549 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   279   1e-71
ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation spec...   276   7e-71
ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation spec...   275   2e-70
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec...   274   3e-70
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec...   274   3e-70
gb|KHG22501.1| Cleavage and polyadenylation specificity factor s...   273   6e-70
ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation spec...   273   6e-70
ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation spec...   273   6e-70
ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Mal...   273   7e-70
ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation spec...   269   1e-68
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   268   2e-68
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr...   267   4e-68
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia...   267   4e-68
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr...   267   4e-68
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   267   4e-68
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   266   5e-68
ref|XP_004310003.1| PREDICTED: cleavage and polyadenylation spec...   265   2e-67
ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation spec...   264   3e-67
ref|XP_002312652.1| RNA recognition motif-containing family prot...   264   3e-67
ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chro...   264   3e-67

>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695488|ref|XP_007044903.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708837|gb|EOY00734.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  279 bits (713), Expect = 1e-71
 Identities = 156/334 (46%), Positives = 190/334 (56%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNR 2363
            QV NMGFQG ++A  K G DP+ +P K +       + G    + A  +  N++  NVN 
Sbjct: 155  QVKNMGFQGLSSASHKVGIDPSGVPQKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVNH 214

Query: 2362 PIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGY 2183
            P++S+N +RP ++NG TM+FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGY
Sbjct: 215  PMISENQVRPPIENGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGY 274

Query: 2182 CQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGR 2003
            CQVEFY+ ++AAACKEGM G++FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGR
Sbjct: 275  CQVEFYDPASAAACKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGR 334

Query: 2002 RVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXAK 1823
            R P+D                   GRN+ +                             K
Sbjct: 335  R-PND----GLGRGGNMNYQSGDAGRNYGR-GGWGRGGQGVVNRSGVGGPMRGRGGVGVK 388

Query: 1822 NMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXXXX 1643
            NM+               Y Q                PQ MMGAGFDPT           
Sbjct: 389  NMVGSSAGVGNGANGGAAYGQGPAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGF 448

Query: 1642 XXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                     P +P +N +GL GVAPHVNPAFFGR
Sbjct: 449  PGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFFGR 482



 Score = 60.1 bits (144), Expect = 1e-05
 Identities = 31/56 (55%), Positives = 36/56 (64%)
 Frame = -2

Query: 1204 HRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            +R+H              RGQSSSRSR ++H M E+  RSRSRD DYGKRRRLPSE
Sbjct: 598  YREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653


>ref|XP_009780918.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Nicotiana sylvestris]
          Length = 648

 Score =  276 bits (706), Expect = 7e-71
 Identities = 155/338 (45%), Positives = 189/338 (55%), Gaps = 4/338 (1%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPG---- 2375
            QVGN G+QGS     K GADP  MP K +     L + G+   R   QM  N++      
Sbjct: 151  QVGNSGYQGSIQTTQKIGADPINMPEKNANEATPLVNSGVGGSRVVTQMPTNQLSSSGNV 210

Query: 2374 NVNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGK 2195
            N+N PI+S+ PIRP+++NG TM+FVG+LHWWTTDAE+E VL+QYG VKEIKFFDERASGK
Sbjct: 211  NINSPIISETPIRPSLENGNTMLFVGELHWWTTDAEIESVLTQYGNVKEIKFFDERASGK 270

Query: 2194 SKGYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQ 2015
            SKGYCQVEF++ +AAA+CKEGM+G +FNGRACVVAFA+PQ++KQMG++Y+NK Q Q Q Q
Sbjct: 271  SKGYCQVEFFDPAAAASCKEGMNGHIFNGRACVVAFATPQTIKQMGSSYMNKTQNQVQTQ 330

Query: 2014 PQGRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXX 1835
            PQGRR  ++                   GRNF +                          
Sbjct: 331  PQGRRPMNE-----GVGRGGANYAPGDAGRNFGR-GSWGRGGPGMPNRGPGGGPVRGRGG 384

Query: 1834 XXAKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXX 1655
              AKNMM               + Q                PQ MMG GFDP        
Sbjct: 385  MGAKNMM---GNPGAGTGPGGAFGQGLAGPAFGGPPAGLMHPQGMMGPGFDPGFMGRGAG 441

Query: 1654 XXXXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                         PQ+P +NPMGLPGVAPHVNPAFFGR
Sbjct: 442  YGGFSGPAFPGMIPQFPAVNPMGLPGVAPHVNPAFFGR 479



 Score = 62.4 bits (150), Expect = 2e-06
 Identities = 32/57 (56%), Positives = 38/57 (66%)
 Frame = -2

Query: 1207 GHRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            G+RD+              RGQSSSRSRS++   QE+DHRSRSRD +YGKRRR PSE
Sbjct: 592  GYRDYRQKERESEYEDDYDRGQSSSRSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_012459070.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 [Gossypium raimondii]
            gi|823252908|ref|XP_012459071.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185
            [Gossypium raimondii] gi|763811133|gb|KJB78035.1|
            hypothetical protein B456_012G173800 [Gossypium
            raimondii]
          Length = 648

 Score =  275 bits (703), Expect = 2e-70
 Identities = 156/334 (46%), Positives = 190/334 (56%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNR 2363
            QV NMGFQG  +A  K G  P+ +P K +       + G    + A Q+  N++  NVN 
Sbjct: 151  QVKNMGFQGLTSASSKVGTGPSVVPQKIANNPAQSLNSGTGGPQGASQVPPNQMGMNVNH 210

Query: 2362 PIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGY 2183
            P++++N +RP ++NG TM+FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGY
Sbjct: 211  PMMNENQVRPPIENGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGY 270

Query: 2182 CQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGR 2003
            CQVEFY+S++AAACKEGM+G++FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q Q QPQGR
Sbjct: 271  CQVEFYDSASAAACKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKDQGQPQVQPQGR 330

Query: 2002 RVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXAK 1823
            R P++               G   GRN+ +                             K
Sbjct: 331  R-PNE----GFGKGGNMNYQGGDAGRNYGR--GGWGRGGQAGNRGGGGGPMRGRGGVGVK 383

Query: 1822 NMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXXXX 1643
            NM+            A  Y                  PQ MMGAGFDPT           
Sbjct: 384  NMVGSSAGVGNGAYGAGAYGPGPGGPAFGGPAGGMMHPQGMMGAGFDPTYMGRGGGYGGF 443

Query: 1642 XXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                     P +P +N MGL GVAPHVNPAFFGR
Sbjct: 444  PGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 477



 Score = 62.0 bits (149), Expect = 3e-06
 Identities = 30/56 (53%), Positives = 39/56 (69%)
 Frame = -2

Query: 1204 HRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            +R+H              RGQSSSRSR+++H  +E++HRSRSRD DYGK+RRLPSE
Sbjct: 593  YREHRHRGRDVDYDDDWDRGQSSSRSRNRSHATREEEHRSRSRDVDYGKKRRLPSE 648


>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 isoform X2 [Vitis vinifera]
            gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185 isoform
            X2 [Vitis vinifera] gi|731372811|ref|XP_010650886.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit CG7185 isoform X2 [Vitis vinifera]
          Length = 650

 Score =  274 bits (701), Expect = 3e-70
 Identities = 166/356 (46%), Positives = 198/356 (55%), Gaps = 3/356 (0%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVN- 2366
            QV N+GFQGS   P K GA+P+ +  K +  +  + + G    R   QM  N++  NVN 
Sbjct: 154  QVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNV 213

Query: 2365 -RPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSK 2189
             RP+V++N IRPAVDNG TM+FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSK
Sbjct: 214  NRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSK 273

Query: 2188 GYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQ 2009
            GYCQVEFY++SAAAACKEGM+G++FNGRACVVAFASPQ+LKQMGA+Y+NK   QAQ+Q Q
Sbjct: 274  GYCQVEFYDASAAAACKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNK--TQAQSQSQ 331

Query: 2008 GRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNK-VXXXXXXXXXXXXXXXXXXXXXXXXXX 1832
            GRR  +D               G   GRN+ +                            
Sbjct: 332  GRRPMND----GVGRGGGMNMQGGDAGRNYGRGGWGRGGQGILNRGPGGGGPMRGRGGAV 387

Query: 1831 XAKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXX 1652
             AKNM+               Y Q                PQ MMG+GFDPT        
Sbjct: 388  GAKNMV---GNTAGVGASGGGYGQGLAGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAY 444

Query: 1651 XXXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGRXXXXXXXXXXXXXXMEAHH 1484
                        P +P +N MGL GVAPHVNPAFFGR              M+ HH
Sbjct: 445  GGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHH 500



 Score = 68.9 bits (167), Expect = 2e-08
 Identities = 34/57 (59%), Positives = 40/57 (70%)
 Frame = -2

Query: 1207 GHRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            G+RDH              RGQSSSRSRS++  + ++DHRSRSRDGDYGKRRRLPSE
Sbjct: 594  GYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 650


>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            isoform X1 [Vitis vinifera]
          Length = 656

 Score =  274 bits (701), Expect = 3e-70
 Identities = 166/356 (46%), Positives = 198/356 (55%), Gaps = 3/356 (0%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVN- 2366
            QV N+GFQGS   P K GA+P+ +  K +  +  + + G    R   QM  N++  NVN 
Sbjct: 160  QVRNLGFQGSTPIPQKTGAEPSDVHGKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNV 219

Query: 2365 -RPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSK 2189
             RP+V++N IRPAVDNG TM+FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSK
Sbjct: 220  NRPMVNENQIRPAVDNGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSK 279

Query: 2188 GYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQ 2009
            GYCQVEFY++SAAAACKEGM+G++FNGRACVVAFASPQ+LKQMGA+Y+NK   QAQ+Q Q
Sbjct: 280  GYCQVEFYDASAAAACKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNK--TQAQSQSQ 337

Query: 2008 GRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNK-VXXXXXXXXXXXXXXXXXXXXXXXXXX 1832
            GRR  +D               G   GRN+ +                            
Sbjct: 338  GRRPMND----GVGRGGGMNMQGGDAGRNYGRGGWGRGGQGILNRGPGGGGPMRGRGGAV 393

Query: 1831 XAKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXX 1652
             AKNM+               Y Q                PQ MMG+GFDPT        
Sbjct: 394  GAKNMV---GNTAGVGASGGGYGQGLAGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAY 450

Query: 1651 XXXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGRXXXXXXXXXXXXXXMEAHH 1484
                        P +P +N MGL GVAPHVNPAFFGR              M+ HH
Sbjct: 451  GGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHH 506



 Score = 68.9 bits (167), Expect = 2e-08
 Identities = 34/57 (59%), Positives = 40/57 (70%)
 Frame = -2

Query: 1207 GHRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            G+RDH              RGQSSSRSRS++  + ++DHRSRSRDGDYGKRRRLPSE
Sbjct: 600  GYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 656


>gb|KHG22501.1| Cleavage and polyadenylation specificity factor subunit [Gossypium
            arboreum]
          Length = 648

 Score =  273 bits (698), Expect = 6e-70
 Identities = 155/334 (46%), Positives = 190/334 (56%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNR 2363
            QV NMGFQG  +A  K G  P+ +P K +       + G    + A Q+  N++  NVN 
Sbjct: 151  QVKNMGFQGLTSASSKVGTGPSVVPQKIANNPAQSLNSGTGGPQGASQVPPNQMGMNVNH 210

Query: 2362 PIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGY 2183
            P++++N +RP ++NG TM+FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGY
Sbjct: 211  PMMNENQVRPPIENGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGY 270

Query: 2182 CQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGR 2003
            CQVEFY+S++AAACKEGM+G++FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q Q QPQGR
Sbjct: 271  CQVEFYDSASAAACKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKDQGQPQVQPQGR 330

Query: 2002 RVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXAK 1823
            R P++               G   GRN+ +                             K
Sbjct: 331  R-PNE----GFGKGGNMNYQGGDAGRNYGR--GGWGRGGQAGNRGGGGGPMRGRGGVGVK 383

Query: 1822 NMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXXXX 1643
            +M+            A  Y                  PQ MMGAGFDPT           
Sbjct: 384  SMVGSSAGVGNGGYGAGAYGPGPGGPAFGGPAGGMMHPQGMMGAGFDPTYMGRGGGYGGF 443

Query: 1642 XXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                     P +P +N MGL GVAPHVNPAFFGR
Sbjct: 444  PGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 477



 Score = 62.0 bits (149), Expect = 3e-06
 Identities = 30/56 (53%), Positives = 39/56 (69%)
 Frame = -2

Query: 1204 HRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            +R+H              RGQSSSRSR+++H  +E++HRSRSRD DYGK+RRLPSE
Sbjct: 593  YREHRHRGRDLDYDDDWDRGQSSSRSRNRSHATREEEHRSRSRDVDYGKKRRLPSE 648


>ref|XP_009619090.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Nicotiana tomentosiformis]
          Length = 648

 Score =  273 bits (698), Expect = 6e-70
 Identities = 153/338 (45%), Positives = 189/338 (55%), Gaps = 4/338 (1%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPG---- 2375
            Q+GN G+QGS     K GADP  MP K +     L + G+   R   QM  N++      
Sbjct: 151  QMGNSGYQGSIPTTQKIGADPINMPEKNANEATPLVNSGVGGSRVVPQMPTNQLSSSGNV 210

Query: 2374 NVNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGK 2195
            N+N PI+S+ PIRP+++NG TM+FVG+LHWWTTD+E+E VL+QYG VKEIKFFDERASGK
Sbjct: 211  NMNSPIISETPIRPSLENGNTMLFVGELHWWTTDSEIESVLTQYGNVKEIKFFDERASGK 270

Query: 2194 SKGYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQ 2015
            SKGYCQVEF++ +AAA+CKEGM+G +FNGRACVVAFA+PQ++KQMG++Y+NK Q Q Q Q
Sbjct: 271  SKGYCQVEFFDPAAAASCKEGMNGHIFNGRACVVAFATPQTIKQMGSSYMNKTQNQVQTQ 330

Query: 2014 PQGRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXX 1835
            PQGRR  ++                   GRNF +                          
Sbjct: 331  PQGRRPMNE-----GVGRGGANYTPGDAGRNFGR-GSWGRGGPGMPNRGPGGGPVRGRGG 384

Query: 1834 XXAKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXX 1655
              AKNMM               + Q                PQ MMG GFDP        
Sbjct: 385  MGAKNMM---GNPGTGTGHGGAFGQGLAGPAFGGPPAGLMHPQGMMGPGFDPGFMGRGAG 441

Query: 1654 XXXXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                         PQ+P +NPMGLPGVAPHVNPAFFGR
Sbjct: 442  YGGFSGPAFPGMIPQFPAVNPMGLPGVAPHVNPAFFGR 479



 Score = 60.1 bits (144), Expect = 1e-05
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -2

Query: 1147 GQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            GQSSSRSRS++   QE+DHRSRSRD +YGKRRR PSE
Sbjct: 612  GQSSSRSRSRSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            6-like [Jatropha curcas] gi|802723892|ref|XP_012085552.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit 6-like [Jatropha curcas]
            gi|802723894|ref|XP_012085553.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 6-like
            [Jatropha curcas] gi|643714049|gb|KDP26714.1|
            hypothetical protein JCGZ_17872 [Jatropha curcas]
          Length = 656

 Score =  273 bits (698), Expect = 6e-70
 Identities = 156/336 (46%), Positives = 188/336 (55%), Gaps = 2/336 (0%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGN--V 2369
            Q  N+GF GS++ P   G DP+ M  K +     +P+      R   Q+  N++  N  V
Sbjct: 150  QARNIGFHGSSSVPSNIGVDPSDMSRKTANEPAPVPNTAATGPRGMPQLPGNQISINMDV 209

Query: 2368 NRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSK 2189
            NRP V++N IRP V+NG+T++FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSK
Sbjct: 210  NRPTVNENQIRPPVENGSTVLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSK 269

Query: 2188 GYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQ 2009
            G+CQVEFY+++AAAACKEGM+G +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q+Q Q Q
Sbjct: 270  GFCQVEFYDAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQGQSQTQNQ 329

Query: 2008 GRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXX 1829
            GRR  +D               G   GRNF +                            
Sbjct: 330  GRRPMND----GAGRGDNMNYQGGDAGRNFGRGGWGRGGQGMMNRGPGGGGPMRGRGAMG 385

Query: 1828 AKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXX 1649
             KNM+               Y Q                PQNMMGAGFDPT         
Sbjct: 386  PKNMIGGAGGVGSGANGGG-YGQGLVGPAFGGLAGGMMPPQNMMGAGFDPTYMGRGAAYG 444

Query: 1648 XXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                       P +P +N MGL GVAPHVNPAFFGR
Sbjct: 445  GFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 480


>ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Malus domestica]
            gi|657994880|ref|XP_008389756.1| PREDICTED: RNA-binding
            protein FUS-like [Malus domestica]
          Length = 658

 Score =  273 bits (697), Expect = 7e-70
 Identities = 165/357 (46%), Positives = 197/357 (55%), Gaps = 4/357 (1%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLP--DPGIDALRNAQQMQVNR--VPG 2375
            QV  MGFQGS T PP  G D + +  K  G +  +P  +PG      A Q+  N+  +  
Sbjct: 155  QVRQMGFQGSTTIPPNVGIDSSDITGK--GNSEYIPSLNPGTAGPPGAAQIPTNQMSIKI 212

Query: 2374 NVNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGK 2195
            N NRP+V++N IRP ++NG+ M+FVG+LHWWTTDAE+E  LSQYGRVKEIKFFDERASGK
Sbjct: 213  NANRPMVNENQIRPPIENGSAMLFVGELHWWTTDAEIESXLSQYGRVKEIKFFDERASGK 272

Query: 2194 SKGYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQ 2015
            SKGYCQVEF++ +AA ACKEGM G++FNGRACVVAFASPQ+LKQMGA+YL+K+Q QAQAQ
Sbjct: 273  SKGYCQVEFHDPAAATACKEGMDGYVFNGRACVVAFASPQTLKQMGASYLSKSQXQAQAQ 332

Query: 2014 PQGRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXX 1835
              GRR  +D               GDTGGRNF +                          
Sbjct: 333  QPGRRPMND---GVGRGAGVNFQAGDTGGRNFGR-GGWGRGGQGGRGPGGGGPMRGRGGA 388

Query: 1834 XXAKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXX 1655
               KNM+               Y Q                PQ MMG+GFDPT       
Sbjct: 389  MGVKNMVGNPAGVGTGANGGG-YGQ-GLGGPGFGGPVGMMNPQGMMGSGFDPTYMGRGGG 446

Query: 1654 XXXXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGRXXXXXXXXXXXXXXMEAHH 1484
                         PQ+PG+N MGL GVAPHVNPAFFGR              ME HH
Sbjct: 447  YGGFPGPAFPGMLPQFPGVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGSSGMEGHH 503


>ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 [Prunus mume]
          Length = 647

 Score =  269 bits (687), Expect = 1e-68
 Identities = 160/356 (44%), Positives = 191/356 (53%), Gaps = 3/356 (0%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVP--GNV 2369
            QV +MGFQGS T PP  G D + +  K +  +    + G        QM  N++    N 
Sbjct: 156  QVRHMGFQGSTTMPPNIGGDSSDITGKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNA 215

Query: 2368 NRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSK 2189
            NRP+ ++N +RP V+NG+TM+FVG+LHWWTTD+ELE VLSQYGRVKEIKFFDERASGKSK
Sbjct: 216  NRPMFNENQVRPTVENGSTMLFVGELHWWTTDSELESVLSQYGRVKEIKFFDERASGKSK 275

Query: 2188 GYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQ 2009
            GYCQVEF++ +AA ACKEGM G+LFNGRACVVAFASPQ+LKQMGA+YL+K+Q Q Q+Q  
Sbjct: 276  GYCQVEFHDPAAATACKEGMDGYLFNGRACVVAFASPQTLKQMGASYLSKSQGQTQSQQP 335

Query: 2008 GRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNK-VXXXXXXXXXXXXXXXXXXXXXXXXXX 1832
            GRR  +D               GDTGGRNF +                            
Sbjct: 336  GRRPMND---GVGRGGGVNYQTGDTGGRNFGRGGWGRGGQGVANRGPGGGGPMRGRGGAM 392

Query: 1831 XAKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXX 1652
             AKNM                Y Q                PQ MMGAGFDPT        
Sbjct: 393  GAKNM--AGNPAGVGTGANGGYGQGLAGPGFGGPVGGMMNPQGMMGAGFDPTYMGRGGGY 450

Query: 1651 XXXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGRXXXXXXXXXXXXXXMEAHH 1484
                          +P +N MGL GVAPHVNPAFFGR              M+ HH
Sbjct: 451  GGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGSSGMDGHH 506



 Score = 65.1 bits (157), Expect = 3e-07
 Identities = 34/56 (60%), Positives = 37/56 (66%)
 Frame = -2

Query: 1204 HRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            +RDH              RGQSSSR RS++  M EDDHRSRSRD DYGKRRRLPSE
Sbjct: 592  YRDHRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 647


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  268 bits (684), Expect = 2e-68
 Identities = 162/339 (47%), Positives = 191/339 (56%), Gaps = 6/339 (1%)
 Frame = -2

Query: 2539 VGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGI----DALRNAQQMQVNRVPGN 2372
            V NMGFQGS + PP+ G DP+ MP + +     + +PG      AL  A QM VN    N
Sbjct: 157  VRNMGFQGSTSGPPRTGVDPSNMPGRVANEPAPVLNPGAAGPQGALIPANQMGVNI---N 213

Query: 2371 VNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKS 2192
            VNR +V++N IRP ++NG TM+FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKS
Sbjct: 214  VNRAMVNENQIRPPLENGGTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKS 273

Query: 2191 KGYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQP 2012
            KGYCQVEF++++AAAACK+GM+G +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q+Q 
Sbjct: 274  KGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQT 333

Query: 2011 QGRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXX 1832
            QGRR  +D                  GGRNF +                           
Sbjct: 334  QGRRPMND----GGGRGGNMNYQSGDGGRNFGR-GGWGRGGQGVPNRGPGGGAMRGRGPM 388

Query: 1831 XAKNMM--XXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXX 1658
             AKNMM                 Y Q                PQNMMG GFDPT      
Sbjct: 389  GAKNMMGSSSGAGSGAGPAAGGGYGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGG 447

Query: 1657 XXXXXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                          P +P +N MGL GVAPHVNPAFF R
Sbjct: 448  GYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNR 486


>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
            gi|508708844|gb|EOY00741.1| RNA-binding family protein
            isoform 6 [Theobroma cacao]
          Length = 602

 Score =  267 bits (682), Expect = 4e-68
 Identities = 151/334 (45%), Positives = 189/334 (56%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNR 2363
            QV N+GFQG  +A  K G DP+ +P K +       + G    +    +  N++  NVN 
Sbjct: 155  QVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNH 214

Query: 2362 PIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGY 2183
            P++++N ++P ++NG TM+FVG+LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGY
Sbjct: 215  PVMNENQVQPPIENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGY 274

Query: 2182 CQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGR 2003
            CQVEFY+ S+AA CKEGM+G++FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGR
Sbjct: 275  CQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGR 334

Query: 2002 RVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXAK 1823
            R P++                   GRN+ +                             K
Sbjct: 335  R-PNE----GLGRGGNLNYQSGDAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVK 388

Query: 1822 NMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXXXX 1643
            NM+            A  Y Q                PQ MMGAGFDPT           
Sbjct: 389  NMVGISAGVGNGANGAGAYGQ-GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGF 447

Query: 1642 XXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                     P +P +N MGL GVAPHVNPAFFGR
Sbjct: 448  PGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481


>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
            gi|508708843|gb|EOY00740.1| RNA-binding family protein
            isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  267 bits (682), Expect = 4e-68
 Identities = 151/334 (45%), Positives = 189/334 (56%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNR 2363
            QV N+GFQG  +A  K G DP+ +P K +       + G    +    +  N++  NVN 
Sbjct: 155  QVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNH 214

Query: 2362 PIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGY 2183
            P++++N ++P ++NG TM+FVG+LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGY
Sbjct: 215  PVMNENQVQPPIENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGY 274

Query: 2182 CQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGR 2003
            CQVEFY+ S+AA CKEGM+G++FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGR
Sbjct: 275  CQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGR 334

Query: 2002 RVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXAK 1823
            R P++                   GRN+ +                             K
Sbjct: 335  R-PNE----GLGRGGNLNYQSGDAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVK 388

Query: 1822 NMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXXXX 1643
            NM+            A  Y Q                PQ MMGAGFDPT           
Sbjct: 389  NMVGISAGVGNGANGAGAYGQ-GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGF 447

Query: 1642 XXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                     P +P +N MGL GVAPHVNPAFFGR
Sbjct: 448  PGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481


>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
            gi|508708842|gb|EOY00739.1| RNA-binding family protein
            isoform 4 [Theobroma cacao]
          Length = 697

 Score =  267 bits (682), Expect = 4e-68
 Identities = 151/334 (45%), Positives = 189/334 (56%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNR 2363
            QV N+GFQG  +A  K G DP+ +P K +       + G    +    +  N++  NVN 
Sbjct: 155  QVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNH 214

Query: 2362 PIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGY 2183
            P++++N ++P ++NG TM+FVG+LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGY
Sbjct: 215  PVMNENQVQPPIENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGY 274

Query: 2182 CQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGR 2003
            CQVEFY+ S+AA CKEGM+G++FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGR
Sbjct: 275  CQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGR 334

Query: 2002 RVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXAK 1823
            R P++                   GRN+ +                             K
Sbjct: 335  R-PNE----GLGRGGNLNYQSGDAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVK 388

Query: 1822 NMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXXXX 1643
            NM+            A  Y Q                PQ MMGAGFDPT           
Sbjct: 389  NMVGISAGVGNGANGAGAYGQ-GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGF 447

Query: 1642 XXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                     P +P +N MGL GVAPHVNPAFFGR
Sbjct: 448  PGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481



 Score = 60.1 bits (144), Expect = 1e-05
 Identities = 31/56 (55%), Positives = 36/56 (64%)
 Frame = -2

Query: 1204 HRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            +R+H              RGQSSSRSR ++H M E+  RSRSRD DYGKRRRLPSE
Sbjct: 642  YREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 697


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695496|ref|XP_007044905.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|590695500|ref|XP_007044906.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708839|gb|EOY00736.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708841|gb|EOY00738.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 652

 Score =  267 bits (682), Expect = 4e-68
 Identities = 151/334 (45%), Positives = 189/334 (56%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNR 2363
            QV N+GFQG  +A  K G DP+ +P K +       + G    +    +  N++  NVN 
Sbjct: 155  QVKNLGFQGLTSASNKVGIDPSGVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNH 214

Query: 2362 PIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGY 2183
            P++++N ++P ++NG TM+FVG+LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGY
Sbjct: 215  PVMNENQVQPPIENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGY 274

Query: 2182 CQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGR 2003
            CQVEFY+ S+AA CKEGM+G++FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGR
Sbjct: 275  CQVEFYDPSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGR 334

Query: 2002 RVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXAK 1823
            R P++                   GRN+ +                             K
Sbjct: 335  R-PNE----GLGRGGNLNYQSGDAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVK 388

Query: 1822 NMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXXXX 1643
            NM+            A  Y Q                PQ MMGAGFDPT           
Sbjct: 389  NMVGISAGVGNGANGAGAYGQ-GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGF 447

Query: 1642 XXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                     P +P +N MGL GVAPHVNPAFFGR
Sbjct: 448  PGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481



 Score = 62.8 bits (151), Expect = 2e-06
 Identities = 31/56 (55%), Positives = 38/56 (67%)
 Frame = -2

Query: 1204 HRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            +R+H              RGQSSSRSR ++H M E++HRSRSRD DYGK+RRLPSE
Sbjct: 597  YREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  266 bits (681), Expect = 5e-68
 Identities = 154/338 (45%), Positives = 189/338 (55%), Gaps = 4/338 (1%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVK-FSGATPLLPD--PGIDALRNAQQMQVNRVPG- 2375
            Q GN G+QGS   P K GADP  MP K  S ATPL+    PG   + +    Q+N     
Sbjct: 151  QAGNSGYQGSMPMPQKIGADPMAMPEKNASEATPLMNSVVPGPRVVPHMPTNQLNSSGNV 210

Query: 2374 NVNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGK 2195
            N+N P++S+ P RP+++NG TM+FVG+LHWWTTDAELE VL+QYG VKEIKFFDERASGK
Sbjct: 211  NMNNPVISETPFRPSLENGNTMLFVGELHWWTTDAELESVLTQYGNVKEIKFFDERASGK 270

Query: 2194 SKGYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQ 2015
            SKGYCQVEF++ ++AAACKEGM+G+ FNGRACVVAFA+PQ++KQMG++Y NK Q Q Q+Q
Sbjct: 271  SKGYCQVEFFDPASAAACKEGMNGYNFNGRACVVAFATPQTIKQMGSSYANKTQNQVQSQ 330

Query: 2014 PQGRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXX 1835
            PQGRR  ++                   GRNF +                          
Sbjct: 331  PQGRRPMNE-----GVGRGGPNYTPGDAGRNFGR-GSWGRGGPGMPNRGPGGGPVRGRGA 384

Query: 1834 XXAKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXX 1655
              +KNMM               + Q                PQ MMG GFDP+       
Sbjct: 385  MGSKNMM---VNPGAGNGAGGAFGQGLAGPAFGGPPAGLMHPQGMMGPGFDPSFMGRGAG 441

Query: 1654 XXXXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                         P +  +NPMGLPGVAPHVNPAFFGR
Sbjct: 442  YGGFSGPAFPGMMPPFQAVNPMGLPGVAPHVNPAFFGR 479



 Score = 63.5 bits (153), Expect = 9e-07
 Identities = 33/57 (57%), Positives = 38/57 (66%)
 Frame = -2

Query: 1207 GHRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            G+RD+              RGQSSSRSRSK+   QE+DHRSRSRD +YGKRRR PSE
Sbjct: 592  GYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_004310003.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 [Fragaria vesca subsp. vesca]
          Length = 646

 Score =  265 bits (676), Expect = 2e-67
 Identities = 157/355 (44%), Positives = 188/355 (52%), Gaps = 2/355 (0%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPG--NV 2369
            QV NMGFQG+AT      AD + +  K +       + G +     QQM  N++    NV
Sbjct: 142  QVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSMNSGSNGPPAVQQMPANQMNMKINV 201

Query: 2368 NRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSK 2189
            NRP+V++N IRP V+NG+  +FVG+LHWWTTDAELEGVLSQ+GR+KEIKFFDERASGKSK
Sbjct: 202  NRPMVNENQIRPPVENGSATLFVGELHWWTTDAELEGVLSQFGRIKEIKFFDERASGKSK 261

Query: 2188 GYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQ 2009
            GYCQV+FY+ +AA+ACKEGM G++FNGRACVVAFAS Q+LKQMG +Y+NK+Q Q Q QPQ
Sbjct: 262  GYCQVDFYDPAAASACKEGMDGYVFNGRACVVAFASSQTLKQMGDSYVNKSQGQVQTQPQ 321

Query: 2008 GRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXX 1829
            GRR  +D               GDT GRNF +                            
Sbjct: 322  GRRPMND---GAGRGGNMNFQGGDT-GRNFGRGNNWGRGGQGVLNRGPGGGGPGRGRGAM 377

Query: 1828 AKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXX 1649
                M               Y Q                   MMG GFDPT         
Sbjct: 378  GARNMVGNNAGVGTGANGGGYGQGLGGPGFGGPVGGMMNAPGMMGPGFDPTYMGRGGGYG 437

Query: 1648 XXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGRXXXXXXXXXXXXXXMEAHH 1484
                       PQ+PG+N MGL GVAPHVNPAFFGR              ME HH
Sbjct: 438  GFPGPGFPGMLPQFPGVNAMGLAGVAPHVNPAFFGRGMATNGMGMMGSSGMEGHH 492



 Score = 63.2 bits (152), Expect = 1e-06
 Identities = 33/56 (58%), Positives = 36/56 (64%)
 Frame = -2

Query: 1204 HRDHXXXXXXXXXXXXXXRGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            +RDH              RG SSSR RS++  M EDDHRSRSRD DYGKRRRLPSE
Sbjct: 591  YRDHRRRERDVAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646


>ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            6-like [Jatropha curcas] gi|802723858|ref|XP_012085541.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit 6-like [Jatropha curcas]
            gi|643714040|gb|KDP26705.1| hypothetical protein
            JCGZ_17863 [Jatropha curcas]
          Length = 651

 Score =  264 bits (675), Expect = 3e-67
 Identities = 151/336 (44%), Positives = 183/336 (54%), Gaps = 2/336 (0%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGN--V 2369
            Q  N+GFQGS++ P     DP+ M  K       +P+  I   R  QQ+  N++  N  V
Sbjct: 149  QARNIGFQGSSSVPSNVVVDPSDMSRKIPNEPAPVPNTSISGPRGIQQLPGNQISINIDV 208

Query: 2368 NRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSK 2189
            NRP +++N IRP V+NG+T++FVG+LHWWTTDAELE VLSQYG+VKEIKFFDERASGKSK
Sbjct: 209  NRPGMNENQIRPPVENGSTVLFVGELHWWTTDAELESVLSQYGKVKEIKFFDERASGKSK 268

Query: 2188 GYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQ 2009
            G+CQVEFY+++AAAACKEGM+G +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q Q Q
Sbjct: 269  GFCQVEFYDAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQGQPQTQNQ 328

Query: 2008 GRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXX 1829
             RR  +D               G   GRNF +                            
Sbjct: 329  ARRPMND----GVGRGGNMNYQGGDAGRNFGRGGWGRGGQGMMNRGPVGGGPVRGRGGTM 384

Query: 1828 AKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXX 1649
                M               + Q                PQNMMG GFDPT         
Sbjct: 385  GAKNMVGGGVGVGNGANGGGFGQGLAGPAFGGPVAGMMPPQNMMGGGFDPTYMGRGAGYG 444

Query: 1648 XXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                       P +P +N MGL GVAPHVNPAFFGR
Sbjct: 445  GFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 480


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222852472|gb|EEE90019.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  264 bits (675), Expect = 3e-67
 Identities = 154/336 (45%), Positives = 183/336 (54%), Gaps = 2/336 (0%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRV--PGNV 2369
            QV NMGFQ S   PP  G DP+ M  K +     LP  G    R A QMQVN++    +V
Sbjct: 139  QVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPLPITGSAGPRGAPQMQVNQMHMSADV 198

Query: 2368 NRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSK 2189
            NRP+V++N +RP ++NG+T ++VG+LHWWTTDAELE   SQ+GRVKEIKFFDERASGKSK
Sbjct: 199  NRPVVNENQVRPPIENGSTTLYVGELHWWTTDAELESFASQFGRVKEIKFFDERASGKSK 258

Query: 2188 GYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQ 2009
            GYCQV+FYE++AAAACKEGM+G +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q Q Q
Sbjct: 259  GYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQMGASYMNKTQGQPQTQSQ 318

Query: 2008 GRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXX 1829
            GR   +D                  GGRN+ +                            
Sbjct: 319  GRGSMND----GAGRGGNANFQSGDGGRNYGR-GAWGRGGQGILNRGPGGGPMRGRGAMG 373

Query: 1828 AKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPTXXXXXXXXX 1649
             KNM                Y Q                PQ MMGAGFDP          
Sbjct: 374  PKNMAGNVAGVGSGANGGG-YGQGLAGPAFGGPAGGMMPPQGMMGAGFDPLYMGRGGGYG 432

Query: 1648 XXXXXXXXXXXPQYPGMNPMGLPGVAPHVNPAFFGR 1541
                       P +P +N MGL GVAPHVNPAFF R
Sbjct: 433  GFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPAFFAR 468


>ref|XP_010251347.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Nelumbo
            nucifera]
          Length = 599

 Score =  264 bits (674), Expect = 3e-67
 Identities = 153/291 (52%), Positives = 176/291 (60%), Gaps = 2/291 (0%)
 Frame = -2

Query: 2542 QVGNMGFQGSATAPPKFGADPNQMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVN- 2366
            Q GN+GF+GSA  PPK GADP+Q   KF+G +  LPD G     +A QM  NR+  NVN 
Sbjct: 156  QGGNLGFRGSAPIPPKVGADPSQXSGKFAGESSSLPDSGTAGPXSAPQMPSNRMNMNVNM 215

Query: 2365 -RPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSK 2189
             RP+ ++N  R AV+NGTTM+FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSK
Sbjct: 216  NRPMXNENMNRXAVENGTTMLFVGELHWWTTDAELEXVLSQYGRVKEIKFFDERASGKSK 275

Query: 2188 GYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQ 2009
            GYCQVEFY+ +AAAACKEGM G +FNGRACVVAFAS Q+LKQMGAAYLNK Q+Q+Q+QPQ
Sbjct: 276  GYCQVEFYDPAAAAACKEGMXGHVFNGRACVVAFASXQTLKQMGAAYLNKTQMQSQSQPQ 335

Query: 2008 GRRVPSDXXXXXXXXXXXXXXXGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXX 1829
            GRR  +D                    RN+ K                            
Sbjct: 336  GRRFMNDGVGRGGGMNHPAGEV----ARNYGKXPWGRGGHGMINRGPGGGAXRGRGGAIG 391

Query: 1828 AKNMMXXXXXXXXXXXXANPYAQXXXXXXXXXXXXXXXXPQNMMGAGFDPT 1676
            AK M+              PY Q                PQ MMGAGFDPT
Sbjct: 392  AKGMV-GSTGGIGTGATGGPYXQALXGPALAGPAGAMMHPQGMMGAGFDPT 441



 Score = 62.4 bits (150), Expect = 2e-06
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = -2

Query: 1147 GQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 1037
            GQ+SSRS SK+ MMQE+++RSRSR+ DYGKRRRLPSE
Sbjct: 563  GQNSSRSXSKSRMMQEEEYRSRSRBADYGKRRRLPSE 599