BLASTX nr result
ID: Papaver30_contig00013992
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00013992
(761 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012091573.1| PREDICTED: mediator of RNA polymerase II tra... 65 6e-09
ref|XP_012091574.1| PREDICTED: mediator of RNA polymerase II tra... 65 6e-09
ref|XP_008225051.1| PREDICTED: mediator of RNA polymerase II tra... 63 1e-08
ref|XP_007214550.1| hypothetical protein PRUPE_ppa000947mg [Prun... 63 1e-08
ref|XP_013661995.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
ref|XP_009114531.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II tra... 62 2e-08
ref|XP_009114532.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
ref|XP_013611545.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
ref|XP_012568420.1| PREDICTED: mediator of RNA polymerase II tra... 62 2e-08
ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II tra... 62 2e-08
ref|XP_012568428.1| PREDICTED: mediator of RNA polymerase II tra... 62 2e-08
ref|XP_010455809.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
ref|XP_010455811.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
ref|XP_010432027.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
ref|XP_006396653.1| hypothetical protein EUTSA_v10028367mg [Eutr... 63 2e-08
ref|XP_011653115.1| PREDICTED: mediator of RNA polymerase II tra... 62 2e-08
ref|XP_008442342.1| PREDICTED: mediator of RNA polymerase II tra... 62 2e-08
ref|XP_010424598.1| PREDICTED: mediator of RNA polymerase II tra... 63 2e-08
ref|XP_012572579.1| PREDICTED: mediator of RNA polymerase II tra... 63 3e-08
>ref|XP_012091573.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Jatropha curcas] gi|643703880|gb|KDP20944.1|
hypothetical protein JCGZ_21415 [Jatropha curcas]
Length = 1249
Score = 65.1 bits (157), Expect(2) = 6e-09
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP SQN A K F+T
Sbjct: 246 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNNATPKWFST 284
Score = 23.1 bits (48), Expect(2) = 6e-09
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Frame = -1
Query: 341 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV 231
SK L AGPSGIM VN S VV WEV
Sbjct: 285 SKGLLGAGPSGIMAADAIVTDSGAMHVAGVPIVNPSTVVVWEV 327
>ref|XP_012091574.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Jatropha curcas]
Length = 1164
Score = 65.1 bits (157), Expect(2) = 6e-09
Identities = 28/39 (71%), Positives = 30/39 (76%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP SQN A K F+T
Sbjct: 161 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNNATPKWFST 199
Score = 23.1 bits (48), Expect(2) = 6e-09
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Frame = -1
Query: 341 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV 231
SK L AGPSGIM VN S VV WEV
Sbjct: 200 SKGLLGAGPSGIMAADAIVTDSGAMHVAGVPIVNPSTVVVWEV 242
>ref|XP_008225051.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Prunus mume]
Length = 1243
Score = 63.2 bits (152), Expect(2) = 1e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +QN A K F T
Sbjct: 241 ARWPNFLCVCSVFSSGSVQLHWSQWPPNQNSAAPKWFQT 279
Score = 23.9 bits (50), Expect(2) = 1e-08
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Frame = -1
Query: 341 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 222
SK L AGPSGIM VN S VV WEV NGF
Sbjct: 280 SKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGLGNGF 330
>ref|XP_007214550.1| hypothetical protein PRUPE_ppa000947mg [Prunus persica]
gi|462410415|gb|EMJ15749.1| hypothetical protein
PRUPE_ppa000947mg [Prunus persica]
Length = 953
Score = 63.2 bits (152), Expect(2) = 1e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +QN A K F T
Sbjct: 241 ARWPNFLCVCSVFSSGSVQLHWSQWPPNQNSAAPKWFQT 279
Score = 23.9 bits (50), Expect(2) = 1e-08
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Frame = -1
Query: 341 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 222
SK L AGPSGIM VN S VV WEV NGF
Sbjct: 280 SKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGLGNGF 330
>ref|XP_013661995.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Brassica napus]
gi|923709381|ref|XP_013661996.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 16-like isoform
X2 [Brassica napus]
Length = 1247
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +Q G K F+T
Sbjct: 247 ARWPNFLCVCSVFSSGSVQLHWSQWPSNQGGTAPKWFST 285
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = -1
Query: 338 KVLRDAGPSGIMXXXXXXXXXXXXXV------NQSIVVTWEVNGFXXXXXXSSLKISCKS 177
K L AGPSGIM V N S +V WEV ++ KIS S
Sbjct: 287 KGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNVLQATPKISTGS 346
Query: 176 NV 171
+V
Sbjct: 347 HV 348
>ref|XP_009114531.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X1 [Brassica rapa]
Length = 1247
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +Q G K F+T
Sbjct: 247 ARWPNFLCVCSVFSSGSVQLHWSQWPSNQGGTAPKWFST 285
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = -1
Query: 338 KVLRDAGPSGIMXXXXXXXXXXXXXV------NQSIVVTWEVNGFXXXXXXSSLKISCKS 177
K L AGPSGIM V N S +V WEV ++ KIS S
Sbjct: 287 KGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNVLQATPKISTGS 346
Query: 176 NV 171
+V
Sbjct: 347 HV 348
>ref|XP_004485757.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Cicer arietinum]
gi|828287445|ref|XP_012568418.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 16-like isoform
X2 [Cicer arietinum]
Length = 1247
Score = 61.6 bits (148), Expect(2) = 2e-08
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP SQN K F T
Sbjct: 248 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNATPPKWFYT 286
Score = 25.0 bits (53), Expect(2) = 2e-08
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Frame = -1
Query: 356 KAVYNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 222
K Y SK L GPSGIM VN S +V WEV NGF
Sbjct: 282 KWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTIVVWEVMPGPGNGF 337
>ref|XP_009114532.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
isoform X2 [Brassica rapa]
Length = 1246
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +Q G K F+T
Sbjct: 246 ARWPNFLCVCSVFSSGSVQLHWSQWPSNQGGTAPKWFST 284
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = -1
Query: 338 KVLRDAGPSGIMXXXXXXXXXXXXXV------NQSIVVTWEVNGFXXXXXXSSLKISCKS 177
K L AGPSGIM V N S +V WEV ++ KIS S
Sbjct: 286 KGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNVLQATPKISTGS 345
Query: 176 NV 171
+V
Sbjct: 346 HV 347
>ref|XP_013611545.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Brassica oleracea var. oleracea]
gi|923743227|ref|XP_013671905.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 16 [Brassica
napus]
Length = 1242
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +Q G K F+T
Sbjct: 242 ARWPNFLCVCSVFSSGSVQLHWSQWPSNQGGTAPKWFST 280
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = -1
Query: 338 KVLRDAGPSGIMXXXXXXXXXXXXXV------NQSIVVTWEVNGFXXXXXXSSLKISCKS 177
K L AGPSGIM V N S +V WEV ++ KIS S
Sbjct: 282 KGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNVLQATPKISTGS 341
Query: 176 NV 171
+V
Sbjct: 342 HV 343
>ref|XP_012568420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X3 [Cicer arietinum]
Length = 1109
Score = 61.6 bits (148), Expect(2) = 2e-08
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP SQN K F T
Sbjct: 110 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNATPPKWFYT 148
Score = 25.0 bits (53), Expect(2) = 2e-08
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Frame = -1
Query: 356 KAVYNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 222
K Y SK L GPSGIM VN S +V WEV NGF
Sbjct: 144 KWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTIVVWEVMPGPGNGF 199
>ref|XP_004485758.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X4 [Cicer arietinum]
gi|828287450|ref|XP_012568427.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 16-like isoform
X4 [Cicer arietinum]
Length = 1047
Score = 61.6 bits (148), Expect(2) = 2e-08
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP SQN K F T
Sbjct: 48 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNATPPKWFYT 86
Score = 25.0 bits (53), Expect(2) = 2e-08
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Frame = -1
Query: 356 KAVYNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 222
K Y SK L GPSGIM VN S +V WEV NGF
Sbjct: 82 KWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTIVVWEVMPGPGNGF 137
>ref|XP_012568428.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X5 [Cicer arietinum]
Length = 1027
Score = 61.6 bits (148), Expect(2) = 2e-08
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 463 IQARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
I RWPNFLC CS+ SS SVQLHWS WP SQN K F T
Sbjct: 26 ISTRWPNFLCVCSVFSSGSVQLHWSQWPPSQNATPPKWFYT 66
Score = 25.0 bits (53), Expect(2) = 2e-08
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 11/56 (19%)
Frame = -1
Query: 356 KAVYNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 222
K Y SK L GPSGIM VN S +V WEV NGF
Sbjct: 62 KWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTIVVWEVMPGPGNGF 117
>ref|XP_010455809.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Camelina sativa]
Length = 1259
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +Q G K F+T
Sbjct: 264 ARWPNFLCVCSVFSSGSVQLHWSQWPSNQGGTTPKWFST 302
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -1
Query: 338 KVLRDAGPSGIMXXXXXXXXXXXXXV------NQSIVVTWEVNGFXXXXXXSSLKISCKS 177
K L AGPSGIM V N S +V WEV ++ KIS S
Sbjct: 304 KGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGS 363
Query: 176 NV 171
V
Sbjct: 364 RV 365
>ref|XP_010455811.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X2 [Camelina sativa]
Length = 1258
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +Q G K F+T
Sbjct: 264 ARWPNFLCVCSVFSSGSVQLHWSQWPSNQGGTTPKWFST 302
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -1
Query: 338 KVLRDAGPSGIMXXXXXXXXXXXXXV------NQSIVVTWEVNGFXXXXXXSSLKISCKS 177
K L AGPSGIM V N S +V WEV ++ KIS S
Sbjct: 304 KGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGS 363
Query: 176 NV 171
V
Sbjct: 364 RV 365
>ref|XP_010432027.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Camelina sativa]
Length = 1257
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +Q G K F+T
Sbjct: 263 ARWPNFLCVCSVFSSGSVQLHWSQWPSNQGGTTPKWFST 301
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -1
Query: 338 KVLRDAGPSGIMXXXXXXXXXXXXXV------NQSIVVTWEVNGFXXXXXXSSLKISCKS 177
K L AGPSGIM V N S +V WEV ++ KIS S
Sbjct: 303 KGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGS 362
Query: 176 NV 171
V
Sbjct: 363 RV 364
>ref|XP_006396653.1| hypothetical protein EUTSA_v10028367mg [Eutrema salsugineum]
gi|557097670|gb|ESQ38106.1| hypothetical protein
EUTSA_v10028367mg [Eutrema salsugineum]
Length = 1255
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +Q G K F+T
Sbjct: 259 ARWPNFLCVCSVFSSGSVQLHWSQWPSNQGGTAPKWFST 297
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -1
Query: 338 KVLRDAGPSGIMXXXXXXXXXXXXXV------NQSIVVTWEVNGFXXXXXXSSLKISCKS 177
K L AGPSGIM V N S +V WEV ++ KIS S
Sbjct: 299 KGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGS 358
Query: 176 NV 171
V
Sbjct: 359 RV 360
>ref|XP_011653115.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Cucumis sativus] gi|700209568|gb|KGN64664.1|
hypothetical protein Csa_1G073710 [Cucumis sativus]
Length = 1237
Score = 62.4 bits (150), Expect(2) = 2e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP SQN + K F T
Sbjct: 235 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCT 273
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Frame = -1
Query: 341 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 222
SK L AGPSGIM VN S VV WEV NGF
Sbjct: 274 SKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 324
>ref|XP_008442342.1| PREDICTED: mediator of RNA polymerase II transcription subunit 16
[Cucumis melo]
Length = 1237
Score = 62.4 bits (150), Expect(2) = 2e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP SQN + K F T
Sbjct: 235 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNSSPPKWFCT 273
Score = 23.9 bits (50), Expect(2) = 2e-08
Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Frame = -1
Query: 341 SKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEV-----NGF 222
SK L AGPSGIM VN S VV WEV NGF
Sbjct: 274 SKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGPGNGF 324
>ref|XP_010424598.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like [Camelina sativa]
Length = 1174
Score = 62.8 bits (151), Expect(2) = 2e-08
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP +Q G K F+T
Sbjct: 260 ARWPNFLCVCSVFSSGSVQLHWSQWPSNQGGTTPKWFST 298
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -1
Query: 338 KVLRDAGPSGIMXXXXXXXXXXXXXV------NQSIVVTWEVNGFXXXXXXSSLKISCKS 177
K L AGPSGIM V N S +V WEV ++ KIS S
Sbjct: 300 KGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGLQATPKISTGS 359
Query: 176 NV 171
V
Sbjct: 360 RV 361
>ref|XP_012572579.1| PREDICTED: mediator of RNA polymerase II transcription subunit
16-like isoform X1 [Cicer arietinum]
Length = 1245
Score = 63.2 bits (152), Expect(2) = 3e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = -2
Query: 457 ARWPNFLCACSIHSSVSVQLHWSWWPLSQNGAISKQFTT 341
ARWPNFLC CS+ SS SVQLHWS WP SQNG+ F T
Sbjct: 249 ARWPNFLCVCSVFSSGSVQLHWSQWPPSQNGSTPSWFHT 287
Score = 22.7 bits (47), Expect(2) = 3e-08
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Frame = -1
Query: 347 YNSKVLRDAGPSGIM------XXXXXXXXXXXXXVNQSIVVTWEVNGFXXXXXXSSLKIS 186
+ SK L GPSGIM VN S +V WEV ++ K S
Sbjct: 286 HTSKGLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNSFQATPKTS 345
Query: 185 CKSNV 171
S V
Sbjct: 346 TASGV 350