BLASTX nr result

ID: Papaver30_contig00013824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00013824
         (838 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277561.1| PREDICTED: UPF0057 membrane protein At4g3065...    60   2e-06
ref|XP_003519155.1| PREDICTED: UPF0057 membrane protein At4g3066...    58   7e-06
ref|XP_009358430.1| PREDICTED: UPF0057 membrane protein At4g3066...    58   1e-05

>ref|XP_002277561.1| PREDICTED: UPF0057 membrane protein At4g30650 [Vitis vinifera]
           gi|147791950|emb|CAN64139.1| hypothetical protein
           VITISV_004807 [Vitis vinifera]
           gi|147805308|emb|CAN73911.1| hypothetical protein
           VITISV_002031 [Vitis vinifera]
           gi|297743660|emb|CBI36543.3| unnamed protein product
           [Vitis vinifera]
          Length = 72

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 30/53 (56%), Positives = 33/53 (62%)
 Frame = -1

Query: 787 GVCFRHGCCSVEFLICLLLTFLXXXXXXXXXXXXXXXVNREPYPDDYWRPINA 629
           GVCFRHGCCSVEF ICLLLT L               V+R+P  D YWRP+NA
Sbjct: 21  GVCFRHGCCSVEFCICLLLTLLGYIPGIIYALYVIVFVDRDP-DDYYWRPLNA 72


>ref|XP_003519155.1| PREDICTED: UPF0057 membrane protein At4g30660 [Glycine max]
           gi|255628505|gb|ACU14597.1| unknown [Glycine max]
          Length = 75

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 28/53 (52%), Positives = 33/53 (62%)
 Frame = -1

Query: 787 GVCFRHGCCSVEFLICLLLTFLXXXXXXXXXXXXXXXVNREPYPDDYWRPINA 629
           GVCFRHGCCSVEF+ICLLLT L               V+R+ Y D+Y RP+ A
Sbjct: 21  GVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYA 73


>ref|XP_009358430.1| PREDICTED: UPF0057 membrane protein At4g30660-like [Pyrus x
           bretschneideri]
          Length = 76

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 28/56 (50%), Positives = 33/56 (58%)
 Frame = -1

Query: 787 GVCFRHGCCSVEFLICLLLTFLXXXXXXXXXXXXXXXVNREPYPDDYWRPINA*SN 620
           GVC RHGCC+VEF ICLLLT L               +NR+ Y D+Y RP+ A SN
Sbjct: 21  GVCLRHGCCTVEFCICLLLTLLGYLPGIIYALYAIVFINRDEYFDEYRRPLYASSN 76


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