BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00010407
         (653 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II tra...   263   9e-68
ref|XP_007046291.1| Phytochrome and flowering time regulatory pr...   258   2e-66
ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   255   2e-65
ref|XP_009356323.1| PREDICTED: mediator of RNA polymerase II tra...   254   3e-65
ref|XP_009356316.1| PREDICTED: mediator of RNA polymerase II tra...   254   3e-65
ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Popu...   253   5e-65
ref|XP_012463728.1| PREDICTED: mediator of RNA polymerase II tra...   253   7e-65
ref|XP_012463727.1| PREDICTED: mediator of RNA polymerase II tra...   253   7e-65
gb|KJB80077.1| hypothetical protein B456_013G080300 [Gossypium r...   253   7e-65
gb|KJB80076.1| hypothetical protein B456_013G080300 [Gossypium r...   253   7e-65
gb|KJB80075.1| hypothetical protein B456_013G080300 [Gossypium r...   253   7e-65
ref|XP_012463724.1| PREDICTED: mediator of RNA polymerase II tra...   253   7e-65
ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II tra...   253   7e-65
ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II tra...   253   9e-65
gb|KHG24986.1| Mediator of RNA polymerase II transcription subun...   252   2e-64
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot...   251   2e-64
emb|CBI27055.3| unnamed protein product [Vitis vinifera]              249   8e-64
ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II tra...   249   8e-64
ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II tra...   249   1e-63
ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II tra...   249   1e-63

>ref|XP_010265228.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
           [Nelumbo nucifera]
          Length = 809

 Score =  263 bits (671), Expect = 9e-68
 Identities = 143/222 (64%), Positives = 167/222 (75%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           KHCILVAASNPY LPTPVYRP   NL+++E+ E   ESCL+DAETVAKSFAQC VSLSVI
Sbjct: 127 KHCILVAASNPYPLPTPVYRPPNQNLEKNESMEGQTESCLSDAETVAKSFAQCFVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
           SP+QLPKL+ IYNAGKRNPRAA+P +D +KN  +L+LLSE+FMEARAALSR GIT++ SN
Sbjct: 187 SPKQLPKLKAIYNAGKRNPRAADPSVDNLKNPQFLILLSENFMEARAALSRPGITSLTSN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           QGP+KMDT+SVP VSGP   SIP VNG +M+RQ IPVG+   ATVKVEP T+ S      
Sbjct: 247 QGPVKMDTTSVPPVSGP-SASIPSVNGPLMTRQQIPVGNIPTATVKVEPTTVSSMVTGPG 305

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           F + P V HG +Q +            QE I N DNVQEFKP
Sbjct: 306 FSNIPPVSHGATQAVPSLQTSSPIASSQEMIANADNVQEFKP 347


>ref|XP_007046291.1| Phytochrome and flowering time regulatory protein isoform 1
           [Theobroma cacao] gi|508710226|gb|EOY02123.1|
           Phytochrome and flowering time regulatory protein
           isoform 1 [Theobroma cacao]
          Length = 871

 Score =  258 bits (660), Expect = 2e-66
 Identities = 139/222 (62%), Positives = 165/222 (74%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQI NL+Q+EN E   ES L+DAETVAKSFAQCSVSLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQIQNLEQTENIEAQTESRLSDAETVAKSFAQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRA +P +D V+N  +LVL+SE+FME RAALSR G+ ++ SN
Sbjct: 187 CPKQLSKLKTIYSAGKRNPRAPDPPVDNVRNPPFLVLISENFMEGRAALSRPGVPSLASN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV S +GP PTS+P VNGSMMSRQ + VG+   AT+KVEP TI S     A
Sbjct: 247 QSPVKMDMASVTSGTGPPPTSVPSVNGSMMSRQPVSVGNVPTATIKVEPTTITSMGTGPA 306

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQEITNN-DNVQEFKP 3
           FPH P+VP  PS  I            QE+ N+ DNVQE KP
Sbjct: 307 FPHIPAVPRAPSPAIPTMQTSSPSTTSQEVMNSGDNVQELKP 348


>ref|XP_008243186.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
           transcription subunit 25 [Prunus mume]
          Length = 868

 Score =  255 bits (651), Expect = 2e-65
 Identities = 137/222 (61%), Positives = 165/222 (74%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           KHCIL+AASNP+ LPTPVYRPQ+ NL+Q+E+ +   E+ L DAE VAKSF QCSVSLSVI
Sbjct: 127 KHCILIAASNPHPLPTPVYRPQLQNLEQNESIDAQTENRLYDAEAVAKSFPQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QLPKLR IYNAGKRNPR A+P ID  KN  +LVL+SE+FMEARA LSR G TN+PSN
Sbjct: 187 CPKQLPKLRAIYNAGKRNPRVADPPIDNAKNPQFLVLISENFMEARATLSRPGSTNLPSN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
             P+KMD + V SV+GP PTS+P VNGS+M+RQ + VG+  PATVKVEP+T+ S     A
Sbjct: 247 PSPVKMDIAPVASVTGPPPTSMPSVNGSVMNRQPVAVGNVPPATVKVEPSTVSSMVAGPA 306

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKP 3
           FPH PSV   PSQG+            QE+ TNN+NV + KP
Sbjct: 307 FPHIPSV-RPPSQGVPSLQTSSPSSASQEMTTNNENVPDLKP 347


>ref|XP_009356323.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X2 [Pyrus x bretschneideri]
           gi|694311125|ref|XP_009356332.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X2 [Pyrus x bretschneideri]
           gi|694311127|ref|XP_009356340.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X2 [Pyrus x bretschneideri]
          Length = 839

 Score =  254 bits (649), Expect = 3e-65
 Identities = 137/220 (62%), Positives = 165/220 (75%), Gaps = 4/220 (1%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           KHC+L+AASNP+ LPTPVYRPQI NL+Q+EN +   E+ L DAE VAKSF Q SVSLSVI
Sbjct: 127 KHCVLIAASNPHPLPTPVYRPQIQNLEQNENIDAQTENRLYDAEAVAKSFPQSSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QLPKLR IYNAGKRNPRAA+P ID  KN +++VL+SE+FMEARA LSR GIT +PSN
Sbjct: 187 CPKQLPKLRAIYNAGKRNPRAADPPIDNAKNPHFIVLISENFMEARATLSRPGITTLPSN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS--SAFP 120
           Q P+KMD + V SV+GP PTS+P VNG +M+RQ I VG+  PATVKVEP+T+ S   +F 
Sbjct: 247 QSPVKMDIAPVASVTGPPPTSMPSVNGPVMNRQPISVGNVPPATVKVEPSTVSSMGPSFA 306

Query: 119 HPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKP 3
           H PSV   PSQG+            QE+ TNNDNV + KP
Sbjct: 307 HIPSV-RPPSQGVPSLQTSSPSSASQEMATNNDNVPDLKP 345


>ref|XP_009356316.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X1 [Pyrus x bretschneideri]
          Length = 846

 Score =  254 bits (649), Expect = 3e-65
 Identities = 137/220 (62%), Positives = 165/220 (75%), Gaps = 4/220 (1%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           KHC+L+AASNP+ LPTPVYRPQI NL+Q+EN +   E+ L DAE VAKSF Q SVSLSVI
Sbjct: 127 KHCVLIAASNPHPLPTPVYRPQIQNLEQNENIDAQTENRLYDAEAVAKSFPQSSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QLPKLR IYNAGKRNPRAA+P ID  KN +++VL+SE+FMEARA LSR GIT +PSN
Sbjct: 187 CPKQLPKLRAIYNAGKRNPRAADPPIDNAKNPHFIVLISENFMEARATLSRPGITTLPSN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS--SAFP 120
           Q P+KMD + V SV+GP PTS+P VNG +M+RQ I VG+  PATVKVEP+T+ S   +F 
Sbjct: 247 QSPVKMDIAPVASVTGPPPTSMPSVNGPVMNRQPISVGNVPPATVKVEPSTVSSMGPSFA 306

Query: 119 HPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKP 3
           H PSV   PSQG+            QE+ TNNDNV + KP
Sbjct: 307 HIPSV-RPPSQGVPSLQTSSPSSASQEMATNNDNVPDLKP 345


>ref|XP_002311445.2| hypothetical protein POPTR_0008s11650g [Populus trichocarpa]
           gi|550332870|gb|EEE88812.2| hypothetical protein
           POPTR_0008s11650g [Populus trichocarpa]
          Length = 896

 Score =  253 bits (647), Expect = 5e-65
 Identities = 137/222 (61%), Positives = 168/222 (75%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           ++CIL+AASNP+ LPTPVYRPQI NL+Q+EN +   ES L+DAETVAKSF QCSVSLSVI
Sbjct: 127 RNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QLPKLR IYNAGKRN RAA+P +D +KN ++LVL+SE+FMEARAALSR G T++PSN
Sbjct: 187 CPKQLPKLRLIYNAGKRNSRAADPPVDNIKNPHFLVLISENFMEARAALSRPGATSLPSN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+K+D +SV SV+GPLP SIP VNGS+ +R  I VG+   ATVKVEP+TI S    SA
Sbjct: 247 QTPVKVDIASVTSVTGPLPASIPSVNGSITNRPPISVGNLPTATVKVEPSTITSMANGSA 306

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKP 3
           FPH  SVP   SQG+            Q++ TN +N Q+ KP
Sbjct: 307 FPHITSVPRPSSQGVPSMQTSSPSTTTQDMATNGENAQDLKP 348


>ref|XP_012463728.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X4 [Gossypium raimondii]
          Length = 707

 Score =  253 bits (646), Expect = 7e-65
 Identities = 138/222 (62%), Positives = 164/222 (73%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQI NL+Q EN E   ESCL+DAETVA+SFAQCSVSLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESCLSDAETVARSFAQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRAA+P +D VKNS +LVL+SE+FME RAALSRSG+ ++ +N
Sbjct: 187 CPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFLVLISENFMEGRAALSRSGVPSLATN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV SV GP P+S   VNGSM+ +  + VG+   ATVKVEP TI S     A
Sbjct: 247 QSPVKMDMASVTSVMGPSPSS---VNGSMVGKLPVSVGNVATATVKVEPTTITSMATGPA 303

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           F H PSVP  PSQ I            QE +T+ DN+QE KP
Sbjct: 304 FSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKP 345


>ref|XP_012463727.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X3 [Gossypium raimondii]
          Length = 738

 Score =  253 bits (646), Expect = 7e-65
 Identities = 138/222 (62%), Positives = 164/222 (73%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQI NL+Q EN E   ESCL+DAETVA+SFAQCSVSLSVI
Sbjct: 20  RHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESCLSDAETVARSFAQCSVSLSVI 79

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRAA+P +D VKNS +LVL+SE+FME RAALSRSG+ ++ +N
Sbjct: 80  CPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFLVLISENFMEGRAALSRSGVPSLATN 139

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV SV GP P+S   VNGSM+ +  + VG+   ATVKVEP TI S     A
Sbjct: 140 QSPVKMDMASVTSVMGPSPSS---VNGSMVGKLPVSVGNVATATVKVEPTTITSMATGPA 196

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           F H PSVP  PSQ I            QE +T+ DN+QE KP
Sbjct: 197 FSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKP 238


>gb|KJB80077.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
          Length = 795

 Score =  253 bits (646), Expect = 7e-65
 Identities = 138/222 (62%), Positives = 164/222 (73%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQI NL+Q EN E   ESCL+DAETVA+SFAQCSVSLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESCLSDAETVARSFAQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRAA+P +D VKNS +LVL+SE+FME RAALSRSG+ ++ +N
Sbjct: 187 CPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFLVLISENFMEGRAALSRSGVPSLATN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV SV GP P+S   VNGSM+ +  + VG+   ATVKVEP TI S     A
Sbjct: 247 QSPVKMDMASVTSVMGPSPSS---VNGSMVGKLPVSVGNVATATVKVEPTTITSMATGPA 303

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           F H PSVP  PSQ I            QE +T+ DN+QE KP
Sbjct: 304 FSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKP 345


>gb|KJB80076.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
          Length = 810

 Score =  253 bits (646), Expect = 7e-65
 Identities = 138/222 (62%), Positives = 164/222 (73%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQI NL+Q EN E   ESCL+DAETVA+SFAQCSVSLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESCLSDAETVARSFAQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRAA+P +D VKNS +LVL+SE+FME RAALSRSG+ ++ +N
Sbjct: 187 CPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFLVLISENFMEGRAALSRSGVPSLATN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV SV GP P+S   VNGSM+ +  + VG+   ATVKVEP TI S     A
Sbjct: 247 QSPVKMDMASVTSVMGPSPSS---VNGSMVGKLPVSVGNVATATVKVEPTTITSMATGPA 303

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           F H PSVP  PSQ I            QE +T+ DN+QE KP
Sbjct: 304 FSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKP 345


>gb|KJB80075.1| hypothetical protein B456_013G080300 [Gossypium raimondii]
          Length = 683

 Score =  253 bits (646), Expect = 7e-65
 Identities = 138/222 (62%), Positives = 164/222 (73%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQI NL+Q EN E   ESCL+DAETVA+SFAQCSVSLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESCLSDAETVARSFAQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRAA+P +D VKNS +LVL+SE+FME RAALSRSG+ ++ +N
Sbjct: 187 CPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFLVLISENFMEGRAALSRSGVPSLATN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV SV GP P+S   VNGSM+ +  + VG+   ATVKVEP TI S     A
Sbjct: 247 QSPVKMDMASVTSVMGPSPSS---VNGSMVGKLPVSVGNVATATVKVEPTTITSMATGPA 303

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           F H PSVP  PSQ I            QE +T+ DN+QE KP
Sbjct: 304 FSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKP 345


>ref|XP_012463724.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X1 [Gossypium raimondii]
           gi|763813222|gb|KJB80074.1| hypothetical protein
           B456_013G080300 [Gossypium raimondii]
          Length = 845

 Score =  253 bits (646), Expect = 7e-65
 Identities = 138/222 (62%), Positives = 164/222 (73%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQI NL+Q EN E   ESCL+DAETVA+SFAQCSVSLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESCLSDAETVARSFAQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRAA+P +D VKNS +LVL+SE+FME RAALSRSG+ ++ +N
Sbjct: 187 CPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFLVLISENFMEGRAALSRSGVPSLATN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV SV GP P+S   VNGSM+ +  + VG+   ATVKVEP TI S     A
Sbjct: 247 QSPVKMDMASVTSVMGPSPSS---VNGSMVGKLPVSVGNVATATVKVEPTTITSMATGPA 303

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           F H PSVP  PSQ I            QE +T+ DN+QE KP
Sbjct: 304 FSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKP 345


>ref|XP_012463725.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X2 [Gossypium raimondii]
           gi|763813221|gb|KJB80073.1| hypothetical protein
           B456_013G080300 [Gossypium raimondii]
          Length = 822

 Score =  253 bits (646), Expect = 7e-65
 Identities = 138/222 (62%), Positives = 164/222 (73%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQI NL+Q EN E   ESCL+DAETVA+SFAQCSVSLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESCLSDAETVARSFAQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRAA+P +D VKNS +LVL+SE+FME RAALSRSG+ ++ +N
Sbjct: 187 CPKQLAKLKAIYSAGKRNPRAADPPVDNVKNSQFLVLISENFMEGRAALSRSGVPSLATN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV SV GP P+S   VNGSM+ +  + VG+   ATVKVEP TI S     A
Sbjct: 247 QSPVKMDMASVTSVMGPSPSS---VNGSMVGKLPVSVGNVATATVKVEPTTITSMATGPA 303

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           F H PSVP  PSQ I            QE +T+ DN+QE KP
Sbjct: 304 FSHVPSVPRVPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKP 345


>ref|XP_011021763.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Populus euphratica]
          Length = 857

 Score =  253 bits (645), Expect = 9e-65
 Identities = 136/222 (61%), Positives = 167/222 (75%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           ++CIL+AASNP+ LPTPVYRPQI NL+Q+EN +   ES L+DAETVAKSF QCSVSLSVI
Sbjct: 127 RNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QLPKL+ IYNAGKRN RAA+P +D +KN ++LVL+SE+FMEARAALSR G T++PSN
Sbjct: 187 CPKQLPKLKSIYNAGKRNSRAADPPVDNIKNPHFLVLISENFMEARAALSRPGATSLPSN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P K+D +SV SV+GPLP SIP VNGS+ +R  I VG+   ATVKVEP+TI S    SA
Sbjct: 247 QTPAKVDIASVTSVTGPLPASIPSVNGSITNRPPISVGNLPTATVKVEPSTITSMANGSA 306

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKP 3
           FPH PSVP   SQ +            Q++ TN +N Q+ KP
Sbjct: 307 FPHIPSVPRPSSQVVPSMQTSSPSTTTQDMATNGENAQDLKP 348


>gb|KHG24986.1| Mediator of RNA polymerase II transcription subunit 25 [Gossypium
           arboreum]
          Length = 828

 Score =  252 bits (643), Expect = 2e-64
 Identities = 135/222 (60%), Positives = 163/222 (73%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQ  NL+QSEN E   ES L+DAETVAKSF QCSVSLSVI
Sbjct: 127 RHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAKSFPQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRA++P +D V+N  +LVL+SE+FME  AALSRSG+ ++  N
Sbjct: 187 CPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFMEGCAALSRSGVPSLAPN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV SV+G  PTS+P VNGS+MSRQ + VG+   ATVKVEP TI S     A
Sbjct: 247 QSPVKMDMASVTSVAGTSPTSVPSVNGSIMSRQPVSVGNVPTATVKVEPATITSMANGPA 306

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKP 3
           FPH PSVP  P Q +            +E+  ++DNVQE KP
Sbjct: 307 FPHIPSVPRAPFQAVPTLQTSSPLTTTEEVMRSSDNVQEIKP 348


>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus
           trichocarpa] gi|222864996|gb|EEF02127.1| PHYTOCHROME AND
           FLOWERING TIME 1 family protein [Populus trichocarpa]
          Length = 796

 Score =  251 bits (642), Expect = 2e-64
 Identities = 135/222 (60%), Positives = 168/222 (75%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           ++CIL+AASNP+ LPTPVYRPQI NL+Q EN +   ES L+DAETVAKSF QCSVSLS+I
Sbjct: 118 RNCILIAASNPHPLPTPVYRPQIQNLEQIENIDAQNESRLSDAETVAKSFPQCSVSLSII 177

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QLPKLR IYNAGKRN RAA+P +D VKN ++LVL+SE+FMEARAALS  G+T++ SN
Sbjct: 178 CPKQLPKLRSIYNAGKRNSRAADPPVDSVKNPHFLVLISENFMEARAALSLPGVTSLTSN 237

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPSSA---- 126
           Q P+K+D +SV SV+GP PTSIP VNGS+ +R +I VG+   ATVKVEP+TI S A    
Sbjct: 238 QTPVKVDIASVTSVTGPAPTSIPSVNGSITNRPTISVGNVPTATVKVEPSTITSMANGPT 297

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKP 3
           FPH PSVP   SQG+            Q++ T+ D+VQ+ KP
Sbjct: 298 FPHNPSVPRPASQGVPILQTSSPSTTTQDMATSGDDVQDLKP 339


>emb|CBI27055.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  249 bits (637), Expect = 8e-64
 Identities = 134/222 (60%), Positives = 165/222 (74%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAA+NPY LPTPVY+PQ+ N++Q+E+ E   ES L+DAE VAKSFAQCSVSLSVI
Sbjct: 127 RHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QLPKL+ IYNAGKRNPR A+P +D VKN ++LVL+S+ FMEARAALSR G++NM +N
Sbjct: 187 CPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGLSNMTAN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SVP VS   P SIP VNG +M+R +I VG+   ATVKVEP+T+ S      
Sbjct: 247 QSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVKVEPSTVTSITSGPG 305

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           FPH PSVP   SQG+            QE I+N DNVQ+ KP
Sbjct: 306 FPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKP 347


>ref|XP_002278845.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
           [Vitis vinifera]
          Length = 827

 Score =  249 bits (637), Expect = 8e-64
 Identities = 134/222 (60%), Positives = 165/222 (74%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAA+NPY LPTPVY+PQ+ N++Q+E+ E   ES L+DAE VAKSFAQCSVSLSVI
Sbjct: 127 RHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCSVSLSVI 186

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QLPKL+ IYNAGKRNPR A+P +D VKN ++LVL+S+ FMEARAALSR G++NM +N
Sbjct: 187 CPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGLSNMTAN 246

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SVP VS   P SIP VNG +M+R +I VG+   ATVKVEP+T+ S      
Sbjct: 247 QSPVKMDIASVPQVSAAPPASIPSVNG-IMNRPTIAVGAVPTATVKVEPSTVTSITSGPG 305

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQE-ITNNDNVQEFKP 3
           FPH PSVP   SQG+            QE I+N DNVQ+ KP
Sbjct: 306 FPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKP 347


>ref|XP_012478637.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
           isoform X3 [Gossypium raimondii]
          Length = 726

 Score =  249 bits (636), Expect = 1e-63
 Identities = 133/222 (59%), Positives = 162/222 (72%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQ  NL+QSEN E   ES L+DAETVAKSF QCSVSLSVI
Sbjct: 19  RHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAKSFPQCSVSLSVI 78

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRA++P +D V+N  +LVL+SE+FME  AALSRSG+ ++  N
Sbjct: 79  CPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFMEGCAALSRSGVPSLAPN 138

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV +V+G  PTS+P VNGS+MSRQ +  G+   ATVKVEP TI S     A
Sbjct: 139 QSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPTATVKVEPTTITSMANGPA 198

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKP 3
           FPH PSVP  P Q +            +E+  ++DNVQE KP
Sbjct: 199 FPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKP 240


>ref|XP_012478635.1| PREDICTED: mediator of RNA polymerase II transcription subunit 25
           isoform X1 [Gossypium raimondii]
          Length = 840

 Score =  249 bits (636), Expect = 1e-63
 Identities = 133/222 (59%), Positives = 162/222 (72%), Gaps = 6/222 (2%)
 Frame = -1

Query: 650 KHCILVAASNPYSLPTPVYRPQIPNLDQSENKEVTPESCLADAETVAKSFAQCSVSLSVI 471
           +HCILVAASNPY LPTPVYRPQ  NL+QSEN E   ES L+DAETVAKSF QCSVSLSVI
Sbjct: 133 RHCILVAASNPYPLPTPVYRPQTQNLEQSENMESQTESRLSDAETVAKSFPQCSVSLSVI 192

Query: 470 SPRQLPKLRGIYNAGKRNPRAAEPVID-VKNSYYLVLLSEHFMEARAALSRSGITNMPSN 294
            P+QL KL+ IY+AGKRNPRA++P +D V+N  +LVL+SE+FME  AALSRSG+ ++  N
Sbjct: 193 CPKQLSKLKAIYSAGKRNPRASDPPVDNVRNPQFLVLISENFMEGCAALSRSGVPSLAPN 252

Query: 293 QGPLKMDTSSVPSVSGPLPTSIPPVNGSMMSRQSIPVGSTVPATVKVEPNTIPS----SA 126
           Q P+KMD +SV +V+G  PTS+P VNGS+MSRQ +  G+   ATVKVEP TI S     A
Sbjct: 253 QSPVKMDMASVNAVAGTPPTSVPSVNGSIMSRQPVSAGNVPTATVKVEPTTITSMANGPA 312

Query: 125 FPHPPSVPHGPSQGIXXXXXXXXXXXXQEI-TNNDNVQEFKP 3
           FPH PSVP  P Q +            +E+  ++DNVQE KP
Sbjct: 313 FPHIPSVPRAPFQAVPMLQTSSPLTTTEEVMRSSDNVQEIKP 354