BLASTX nr result

ID: Papaver30_contig00010240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00010240
         (1111 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010422078.1| PREDICTED: putative F-box protein At3g23950 ...    62   9e-07
ref|XP_010490100.1| PREDICTED: putative F-box protein At3g23950 ...    60   3e-06
ref|XP_010466811.1| PREDICTED: putative F-box protein At3g23950 ...    60   4e-06
ref|XP_010456878.1| PREDICTED: putative F-box protein At3g23950 ...    59   9e-06

>ref|XP_010422078.1| PREDICTED: putative F-box protein At3g23950 [Camelina sativa]
          Length = 421

 Score = 62.0 bits (149), Expect = 9e-07
 Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
 Frame = -1

Query: 1108 NPLTQKWFY-----FLHHQ*VEWLSMVS-CDECFLEPK-------SYKVIRIPDFGNVTK 968
            NPL Q+WF      FL  +  E L M    ++C L          SYKV+ +   G    
Sbjct: 123  NPLLQEWFQVLLPPFLSLEDFERLRMQERFNDCGLVTNMRSGIVVSYKVVLVMSHGGTKV 182

Query: 967  EFKVEIFSSDLGNWNICDLSFPVPGTWKFFLNDRCVTHNGVFYWYQNRNYIILAVSVNGN 788
            +F   I+SSD G W   +++ P+   W  F + + +  NG+ +W+ N N   +A    G 
Sbjct: 183  DFA--IYSSDTGKWENRNVTCPLHHCW--FSHRKSIALNGILHWFSNLNTSFMAYDFYG- 237

Query: 787  TNHGTCGNECRILDIPDLAMDVEINCLSQCLGESEG-LLCFARFNQKE-RSLSVWVL 623
               G   + CRI+  PD      +    +    SEG ++ F  +++ E R+L VW L
Sbjct: 238  ---GNVDDGCRIISFPDSGKHDVLRRYRRTFTTSEGSIVYFNEYHENENRTLRVWRL 291


>ref|XP_010490100.1| PREDICTED: putative F-box protein At3g23950 [Camelina sativa]
          Length = 421

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
 Frame = -1

Query: 1108 NPLTQKWFY-----FLHHQ*VEWLSMVS-CDECFLEPK-------SYKVIRIPDFGNVTK 968
            NPL Q+WF      FL  +  E L M    +EC L  K       SYKV+ +   G    
Sbjct: 123  NPLFQEWFRVLLPPFLSLEDFERLRMQERFNECGLVTKMWSGIVVSYKVVLVMSHGGTQV 182

Query: 967  EFKVEIFSSDLGNWNICDLSFPVPGTWKFFLNDRCVTHNGVFYWYQNRNYIILAVSVNGN 788
             F   I+SSD G W   +++ P+   W  F + + +  NG+ +W+ + N   +A    G 
Sbjct: 183  GFA--IYSSDTGTWETRNVTCPLHHCW--FSHRKSIALNGILHWFSSFNTSFMAYDFYG- 237

Query: 787  TNHGTCGNECRILDIPDLAMDVEINCLSQCLGESEGLLCFARFNQ----KERSLSVWVL 623
               G   + CRI+  PD      +    +    SEG + +  FN+    + R+L VW L
Sbjct: 238  ---GNVDDGCRIISFPDSGKHDLLRRFRRTFTTSEGSIVY--FNEYHENQNRTLRVWRL 291


>ref|XP_010466811.1| PREDICTED: putative F-box protein At3g23950 [Camelina sativa]
          Length = 421

 Score = 59.7 bits (143), Expect = 4e-06
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
 Frame = -1

Query: 1012 SYKVIRIPDFGNVTKEFKVEIFSSDLGNWNICDLSFPVPGTWKFFLNDRCVTHNGVFYWY 833
            SYKV+ +   G     F   I+SSD G W    ++ P+   W  F + + +  NG+ +W+
Sbjct: 169  SYKVVLVMTHGGTNVGFA--IYSSDTGTWETRHVTCPLHHCW--FSHRKSIALNGMLHWF 224

Query: 832  QNRNYIILAVSVNGNTNHGTCGNECRILDIPDLAMDVEINCLSQCLGESEG-LLCFARFN 656
             + N   +A    G    G   +ECRI+  PD      +   S+    SEG ++ F  + 
Sbjct: 225  SSLNSSFMAYDFYG----GNVDDECRIISFPDSGKHDVLRRFSRTFTTSEGSIVYFNAYG 280

Query: 655  QKE-RSLSVWVL-------DGDWCVLHKD--IQLHDWLAEMY 560
            + E R+L VW L       +  W +L +   + ++DWL   Y
Sbjct: 281  ENENRTLRVWRLVKYTDSPEDAWQLLWEVSLVSMNDWLGIDY 322


>ref|XP_010456878.1| PREDICTED: putative F-box protein At3g23950 [Camelina sativa]
          Length = 300

 Score = 58.5 bits (140), Expect = 9e-06
 Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
 Frame = -1

Query: 1108 NPLTQKWFY-----FLHHQ*VEWLSMVSC-DECFLEPK-------SYKVIRIPDFGNVTK 968
            NPL Q+WF      FL  + +E L +  C  +  L  K       SYKV+ +   G    
Sbjct: 124  NPLFQEWFRVPLPPFLSLEDLERLRLHDCFSDTGLVTKMRSGIVVSYKVVLVMSHGGTKL 183

Query: 967  EFKVEIFSSDLGNWNICDLSFPVPGTWKFFLNDRCVTHNGVFYWYQNRNYIILAVSVNGN 788
             F   I+SSD G W   +++ P+   W  F + + ++ NG+ +W+ +     +A    G 
Sbjct: 184  GFA--IYSSDTGKWENRNVTCPLHHCW--FGHRKSISLNGILHWFSSLISSFMAYDFYG- 238

Query: 787  TNHGTCGNECRILDIPDLAMDVEINCLSQCLGESEG-LLCFARFNQKE-RSLSVWVL 623
               GT  + C I+  PD   D  +    +    SEG ++ F  F + E R+L VW L
Sbjct: 239  ---GTVDDGCHIISFPDSGNDDVLRRFRRTFTPSEGSIVYFNEFREDENRTLQVWRL 292


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