BLASTX nr result
ID: Papaver30_contig00009959
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00009959
(1880 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 140 4e-56
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 130 1e-54
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 137 5e-52
ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868... 129 1e-50
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 139 3e-50
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 124 3e-50
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 125 3e-50
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 130 5e-50
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 131 1e-49
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 125 1e-49
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 129 2e-49
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 133 3e-49
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 134 5e-49
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 131 9e-49
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [... 129 9e-49
emb|CDY58610.1| BnaCnng33390D [Brassica napus] 122 9e-49
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 121 2e-48
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 121 2e-48
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 124 3e-48
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 121 8e-48
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 140 bits (353), Expect(2) = 4e-56
Identities = 72/168 (42%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
Frame = -3
Query: 492 LCFNYFSSTS--WHQRLGHSSFRTLKHILSEVDASILAHLSPSLCTKC*LAKSHSLPYFS 319
+C SST WH+RLGH S T+K++LS+ + + + + + C+ C L K H P+
Sbjct: 512 VCTTSLSSTFDLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPF-- 569
Query: 318 SVNKVSYG-PLDLIHSDIWCSP-VKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF* 145
S++ +Y PL+LIH D+W V S +G++YY+ FVD FSRF+W++ L NKSE TF
Sbjct: 570 SLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFV 629
Query: 144 TFKAHVKNYFGTTIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
FK V+ F IK LQ DWG E+R S+L ++HRVSC H Q
Sbjct: 630 NFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQ 677
Score = 108 bits (269), Expect(2) = 4e-56
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQ+C K+GH+ +C +R+ + + N+ + S +Y + P N
Sbjct: 310 CQLCGKIGHVVAQCYYRFDHT---FQVPQNLSSRNSSPRAYYS-FSP-------QVNGVI 358
Query: 893 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 714
P+S S +NW PDSGA+ H+ + +L +E+ V VGNG GLSI HIG S F
Sbjct: 359 PTS-EVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFL 417
Query: 713 T--GSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGV 540
+ S ++N++LHVP ++K +LSV +F KDN +FEFH VKD L+ G V
Sbjct: 418 SPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKV 477
Query: 539 RN*LYDLNFDS 507
R+ LY FDS
Sbjct: 478 RDGLY--AFDS 486
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 130 bits (327), Expect(2) = 1e-54
Identities = 60/157 (38%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Frame = -3
Query: 468 TSWHQRLGHSSFRTLKHILSEVDASILAHLSPSLCTKC*LAKSHSLPYFSSVNKVSYGPL 289
T WH RLGH S + +L++ + L + +C+ C + K H + S + + PL
Sbjct: 505 TLWHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGKIHKSSFLHSTSSYTK-PL 563
Query: 288 DLIHSDIWC-SPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFG 112
+LIH+D+W + S +G +YY+ F+D +SRFTW+Y L +KSE F F FK+ V+ G
Sbjct: 564 ELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLG 623
Query: 111 TTIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
IK +Q+DWG EYR+ + +LT+ ++HR+SC + H+
Sbjct: 624 HKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHE 660
Score = 113 bits (282), Expect(2) = 1e-54
Identities = 64/193 (33%), Positives = 105/193 (54%), Gaps = 10/193 (5%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGS---YDTFYDDYWP*ETESYAVYN 903
CQ+C ++GH+ ++C +R+ +S + +Q + + ++P
Sbjct: 286 CQLCGRIGHVVMQCYYRFDQSFTGPSQLQGNRPQGNMAHLHQQLSEXFFPGT-------- 337
Query: 902 EYYPSSFPSTS----GENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHH 735
PS P+T+ NW PDSGAT+H+ +L +L S++ ++ V VGNG GL IHH
Sbjct: 338 ---PSVKPTTAEIIQDNNWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGKGLPIHH 394
Query: 734 IGNSHFSTG---SSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIH 564
IG++ FS+ S + +LHVP+++K +LSV +F DN+ +FEFHP+ VKD
Sbjct: 395 IGHTSFSSSFIPSKTLALKQLLHVPEITKNLLSVSKFAADNHVFFEFHPTSCFVKDPSTR 454
Query: 563 KELLQGGVRN*LY 525
L+ G ++ LY
Sbjct: 455 TVLMHGQLKGGLY 467
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 137 bits (344), Expect(2) = 5e-52
Identities = 69/155 (44%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
Frame = -3
Query: 462 WHQRLGHSSFRTLKHILSEVDASILAHLSPS-LCTKC*LAKSHSLPYFSSVNKVSYGPLD 286
WH RLGH S ++ ++S + L ++ S +C C AKSH LPY S + VS PL+
Sbjct: 1416 WHSRLGHPSLAIVQKVVSSNNLPCLGDVNESGVCNACQQAKSHQLPYPKSFS-VSNNPLE 1474
Query: 285 LIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGTT 106
L+ SD+W SV G KYYVSF+D FS+FTW+Y L +K+EVF F F+ V+ F
Sbjct: 1475 LVFSDVWGPAPTSVGGRKYYVSFIDDFSKFTWIYLLKSKAEVFLKFQEFQQRVERLFNRK 1534
Query: 105 IKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
I +Q DWG EY + SF T + H VSC + HQ
Sbjct: 1535 IISMQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQ 1569
Score = 97.8 bits (242), Expect(2) = 5e-52
Identities = 58/185 (31%), Positives = 82/185 (44%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQ+C K+GH+ +C +RY ++ F D SY V
Sbjct: 1242 CQLCGKIGHVVADCWYRYDEN-------------------FIPDSKTAAAASYGV----- 1277
Query: 893 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 714
NW D+GAT HI +L L H +Y E + +GAG+ I H+G+S
Sbjct: 1278 --------DTNWYMDTGATDHITGELDKLTTHEKYNGKEQIHTASGAGMDIKHVGHSIIH 1329
Query: 713 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVRN 534
T N + N+LHVP K ++S + DN+ + E HP +KD LL+G RN
Sbjct: 1330 TPICNIQLKNILHVPKAEKNLISAHRLAVDNHAFVEVHPRFFAIKDQVTKNLLLRGPCRN 1389
Query: 533 *LYDL 519
LY L
Sbjct: 1390 GLYPL 1394
>ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868780 [Brassica rapa]
Length = 2690
Score = 129 bits (323), Expect(2) = 1e-50
Identities = 68/155 (43%), Positives = 90/155 (58%)
Frame = -3
Query: 474 SSTSWHQRLGHSSFRTLKHILSEVDASILAHLSPSLCTKC*LAKSHSLPYFSSVNKVSYG 295
S SWH RLGH S LK ++S+ I + C C KSH LP+ ++ K S
Sbjct: 1148 SLASWHSRLGHPSLPILKTLVSQFSLPISDSIKQFSCVDCLTNKSHKLPFHTNTIK-SDK 1206
Query: 294 PLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYF 115
PL ++SD+W SP+ S + +KYY+ FVD F+R+TWLYPL KS+V TF FKA V+N F
Sbjct: 1207 PLQYLYSDVWTSPIVSSDHYKYYLIFVDHFTRYTWLYPLKQKSQVRETFIAFKALVENRF 1266
Query: 114 GTTIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRH 10
T I L +D G EY + SFL + + H S H
Sbjct: 1267 KTRIVTLYSDNGGEYIGLRSFLATHGISHLTSPPH 1301
Score = 101 bits (251), Expect(2) = 1e-50
Identities = 63/184 (34%), Positives = 92/184 (50%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQ+C GH A C +Q + G +++ W + A ++Y
Sbjct: 967 CQLCGIFGHSAQRC-----------SQLQSFGSSSGQFNS--PASWN-PRANLATSSQYN 1012
Query: 893 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 714
P+ NW DSGAT+H+ DL +L LH Y E V + +G GLSI HIG++
Sbjct: 1013 PN--------NWILDSGATHHLTTDLNNLALHQPYNGGEEVTIADGTGLSISHIGSAILP 1064
Query: 713 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVRN 534
T S +F + +VL+VP++ K ++SV + N EF P+H VKDL LLQG +N
Sbjct: 1065 TPSHSFPLRDVLYVPNLHKNLVSVYRLCNANQVSVEFFPAHFQVKDLSTGARLLQGKTKN 1124
Query: 533 *LYD 522
LY+
Sbjct: 1125 ELYE 1128
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 139 bits (351), Expect(2) = 3e-50
Identities = 67/154 (43%), Positives = 95/154 (61%)
Frame = -3
Query: 462 WHQRLGHSSFRTLKHILSEVDASILAHLSPSLCTKC*LAKSHSLPYFSSVNKVSYGPLDL 283
WH RLGH S T+K ++++ S S+C C AKSH LP+ S + VS PL+L
Sbjct: 453 WHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPIS-SSVSKHPLEL 511
Query: 282 IHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGTTI 103
+ SD+W +SV KYYVSF+D FS+FTW+Y + +KS+VF F F+ V+ F I
Sbjct: 512 VFSDVWGPAPESVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQFDRKI 571
Query: 102 KMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
+Q DWG EY++++SF + ++H VSC H HQ
Sbjct: 572 LAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQ 605
Score = 89.4 bits (220), Expect(2) = 3e-50
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 1/191 (0%)
Frame = -1
Query: 1076 VCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 897
+CQ+C K GH A +C +RY + Y D + + A N Y
Sbjct: 277 ICQVCFKRGHTAADCWYRYDED----------YVPDAKH------------VAAAAVNSY 314
Query: 896 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 717
+ NW D+GAT H+ +L L + +Y E + +GAG+ I HIG++
Sbjct: 315 GVDT-------NWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASGAGMDISHIGHAIV 367
Query: 716 -STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGV 540
+ S N + NVL+VP K ++SV + DN+ + E H + +KD K LL+G
Sbjct: 368 HNPNSRNIHLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITRKTLLKGRS 427
Query: 539 RN*LYDLNFDS 507
LY L S
Sbjct: 428 WRRLYPLPHSS 438
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 124 bits (312), Expect(2) = 3e-50
Identities = 62/154 (40%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Frame = -3
Query: 474 SSTSWHQRLGHSSFRTLKHILSEVDASILAHLSPSLCTKC*LAKSHSLPYFSSVNKVSYG 295
++T WH RLGH + LKHIL+ + S H + ++C C AKSH LP+ V++ S+
Sbjct: 518 TTTLWHSRLGHPADNILKHILTSCNISHQCHKN-NVCCACQFAKSHKLPFNVXVSRASH- 575
Query: 294 PLDLIHSDIWCSP-VKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNY 118
PL L+H+D+W + S G +Y++ FVD FSRF+W+YPL +K + S F FK+ V+N
Sbjct: 576 PLALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQ 635
Query: 117 FGTTIKMLQNDWGSEYRNVSSFLTNYEVLHRVSC 16
F + I+ L++D G E++ SS+L + + + SC
Sbjct: 636 FNSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSC 669
Score = 104 bits (259), Expect(2) = 3e-50
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQ+C K GH + C R+ + Y + DT + + + A+
Sbjct: 321 CQLCGKFGHTVVRCYHRFDINFQGYNP---------NMDTVQTNKPNAKNQVQAMM---- 367
Query: 893 PSSFPST-SGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 717
+ PST S E W D+GAT+H+ + L+ Y + V VGNG L I H G + F
Sbjct: 368 --ASPSTISDEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGKHLRILHTGTTFF 425
Query: 716 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVR 537
+ S F + VLHVPD++ ++SV QF DNN +FEFHP VKD K LLQG +
Sbjct: 426 PSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLE 485
Query: 536 N*LYDLNFDS---PTFKAFVSTTF 474
+ LY F + P+ AFVS+++
Sbjct: 486 HGLY--RFPARFVPSPAAFVSSSY 507
Score = 67.0 bits (162), Expect = 6e-08
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = -2
Query: 1831 NPDYLEWIHQDQLLLSWLISCLSDETHFSIVGSTSSLTA*QTLENNYNSSVKSRLMQLKN 1652
NPD++ W D+++LSW+ S L+ E IVG SS LE + +S ++R+MQL+
Sbjct: 143 NPDFVMWRRFDRMILSWIYSSLTPEIMGQIVGYQSSHAXWFALEXXFXASSRARVMQLRL 202
Query: 1651 DLQHLRKGNESMQVYFSRAKSIDHQLAQVSRPV 1553
+ Q RKG+ +M Y + KS+ LA + PV
Sbjct: 203 EFQTTRKGSLTMMEYILKLKSLADNLAAIGEPV 235
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 125 bits (315), Expect(2) = 3e-50
Identities = 67/165 (40%), Positives = 99/165 (60%), Gaps = 6/165 (3%)
Frame = -3
Query: 477 FSSTS-----WHQRLGHSSFRTLKHILSEVDASILAHLSP-SLCTKC*LAKSHSLPYFSS 316
FSST WH+RLGH S + ++S + L++ S S+C C AK+H LPY S
Sbjct: 448 FSSTRVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSVCDACLQAKAHQLPYTIS 507
Query: 315 VNKVSYGPLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFK 136
+++ S PL LI SD++ + S +KYYVSF+D +S+FTW+Y L +KS+V+ +F F+
Sbjct: 508 MSQSS-APLMLIFSDVFGPAIDSFGRYKYYVSFIDDYSKFTWIYLLRHKSDVYKSFCEFQ 566
Query: 135 AHVKNYFGTTIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
V+ FG I Q+DWG EY +++ + H+VSC H HQ
Sbjct: 567 HLVERMFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQ 611
Score = 103 bits (256), Expect(2) = 3e-50
Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKS-ASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 897
CQ+C ++GH AL C +R+ ++ D A++ +GS
Sbjct: 282 CQVCSRVGHTALNCWYRFDENYVPDQRSANSAAHQNGS---------------------- 319
Query: 896 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 717
W D+GAT HI DL L +H +Y + + NG G++I +IGN+
Sbjct: 320 ---------NVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIV 370
Query: 716 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVR 537
T S + + +VLHVP K ++SV + T DN+ + EFH SH +KD LL G R
Sbjct: 371 PTSSRSLHLRSVLHVPSTHKNLISVHRLTNDNDVFIEFHSSHFLIKDRQTKAVLLHGKCR 430
Query: 536 N*LYDL 519
+ LY L
Sbjct: 431 DGLYPL 436
Score = 60.1 bits (144), Expect = 7e-06
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = -2
Query: 1876 PPEFVRDPITQT-PIENPDYLEWIHQDQLLLSWLISCLSDETHFSIVGSTSSLTA*QTLE 1700
PP+ + D +T + NP Y WI +DQ +L +L+S LS E S+V ++S + TL
Sbjct: 56 PPKTISDASDRTVTVANPAYGRWIARDQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLS 115
Query: 1699 NNYNSSVKSRLMQLKNDLQHLRKGNESMQVYFSRAKSIDHQLAQVSRPV 1553
Y+S ++R + + L +KG S+ YF++ + +L +P+
Sbjct: 116 EMYSSHSRARKVNTRIALATTKKGASSVAEYFAKMRGFADELGAAGKPL 164
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 130 bits (326), Expect(2) = 5e-50
Identities = 66/153 (43%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Frame = -3
Query: 465 SWHQRLGHSSFRTLKHILSEVDASILAHLSPSL-CTKC*LAKSHSLPYFSSVNKVSYGPL 289
SWH RLGH S LK ++S+ + C+ C + KSH LP++S+ +SY PL
Sbjct: 559 SWHSRLGHPSPPVLKSLVSQFSLPVSNSSQKHFPCSHCLINKSHKLPFYSNTI-ISYTPL 617
Query: 288 DLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGT 109
+ ++SD+W SPV SV+ FKYY+ VD ++R+TWLYPL KS+V TF FKA V+N F T
Sbjct: 618 EYVYSDVWTSPVTSVDNFKYYLILVDHYTRYTWLYPLKQKSQVRETFVAFKALVENRFQT 677
Query: 108 TIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRH 10
I+ L +D G E+ + FL + + H S H
Sbjct: 678 KIRTLYSDNGGEFIALRQFLLTHGISHLTSLPH 710
Score = 98.2 bits (243), Expect(2) = 5e-50
Identities = 66/200 (33%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQIC GH A C + G+Y T +P T +
Sbjct: 373 CQICGVFGHSARRC---------------SQLQMSGAYSTPSPSQYPNATVPWQPR---- 413
Query: 893 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 714
++ + S W DSGAT+H+ DL +L LH Y E V + +G+ L I H G+S S
Sbjct: 414 -ANMAAMSYNPWLLDSGATHHLTTDLNNLALHQPYNGGEEVTIADGSTLPITHTGSSTLS 472
Query: 713 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVRN 534
T S + +NN+L+VP++ K ++SV + N EF P+H VKDL LLQG ++
Sbjct: 473 TQSRSLALNNILYVPNLHKNLISVYKLCNANKVSVEFFPAHFQVKDLSTGARLLQGRTKD 532
Query: 533 *LYDLNFDSPT-FKAFVSTT 477
LY+ S T F S T
Sbjct: 533 ELYEWPVPSNTPISLFASPT 552
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 131 bits (329), Expect(2) = 1e-49
Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
Frame = -3
Query: 474 SSTSWHQRLGHSSFRTLKHILSEVDASILAH-LSPSLCTKC*LAKSHSLPYFSSVNKVSY 298
S WH RLGH S + ILS+ L++ ++ S+C C AK H LP+ S + VS
Sbjct: 441 SFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKCHQLPFPRSTS-VSN 499
Query: 297 GPLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNY 118
PL+LIHSD+W +SV KYYVSF+D +S+F W+Y L +KSEVF F F+ V+
Sbjct: 500 NPLELIHSDVWGPASESVGAKKYYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQKLVERQ 559
Query: 117 FGTTIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
F I +Q DWG EY + +F + H VSC H HQ
Sbjct: 560 FDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQ 598
Score = 95.9 bits (237), Expect(2) = 1e-49
Identities = 62/199 (31%), Positives = 88/199 (44%)
Frame = -1
Query: 1076 VCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 897
VCQ+C K GH+A +C RY D Y P E A Y
Sbjct: 271 VCQVCHKRGHVASDCWHRYD-----------------------DSYVPDEKLGGAATYAY 307
Query: 896 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 717
+ NW D+GAT HI L L Y+ + + +G G SI H+G++
Sbjct: 308 GVDT-------NWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGTSIKHVGHAIV 360
Query: 716 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVR 537
T S + NVLHVP+ +K ++SV + DN + E H + +KD + +L+G R
Sbjct: 361 PTPSHPLHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCR 420
Query: 536 N*LYDLNFDSPTFKAFVST 480
LY L S +AFV+T
Sbjct: 421 RGLYPLPARSSLRQAFVAT 439
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 125 bits (313), Expect(2) = 1e-49
Identities = 63/153 (41%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
Frame = -3
Query: 465 SWHQRLGHSSFRTLKHILSEVDASILAHLSPSL-CTKC*LAKSHSLPYFSSVNKVSYGPL 289
SWH RLGH S LK ++S+ I L L C+ C + KSH LP++S+ S+ PL
Sbjct: 468 SWHARLGHPSLPILKTLISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSH-PL 526
Query: 288 DLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGT 109
+ +++D+W SP+ S++ +KYY+ VD ++R+TWLYPL KS+V TF TF A V+N F +
Sbjct: 527 EYLYTDVWTSPITSIDNYKYYLVIVDHYTRYTWLYPLRQKSQVRETFITFTALVENKFKS 586
Query: 108 TIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRH 10
I L +D G E+ + SFL ++ + H + H
Sbjct: 587 KIGTLYSDNGGEFIALRSFLASHGISHMTTPPH 619
Score = 101 bits (252), Expect(2) = 1e-49
Identities = 65/184 (35%), Positives = 92/184 (50%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQIC GH A C + + A Y S + Y P + + V
Sbjct: 280 CQICSVHGHSARRCP-QLQQHAGSYA----------SNQSSSSSYAPWQPRANMV----- 323
Query: 893 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 714
S+ P SG NW DSGAT+H+ +DL +L LH Y E V + +G+GL I H G++
Sbjct: 324 -SATPYNSG-NWLLDSGATHHLTSDLNNLALHQPYNGGEEVTIADGSGLPISHSGSALLP 381
Query: 713 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVRN 534
T + + + +VL+VPD+ K ++SV + N EF P+H VKDL LLQG +N
Sbjct: 382 TPTRSLDLKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQGKTKN 441
Query: 533 *LYD 522
LY+
Sbjct: 442 ELYE 445
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 129 bits (325), Expect(2) = 2e-49
Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
Frame = -3
Query: 474 SSTSWHQRLGHSSFRTLKHILSEVDASILAH-LSPSLCTKC*LAKSHSLPYFSSVNKVSY 298
S WH RLGH S + ILS+ L++ ++ S+C C AK H LP+ S + VS
Sbjct: 450 SFVRWHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKCHQLPFPRSTS-VSN 508
Query: 297 GPLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNY 118
PL+LIHSD+W +SV KYYVSF+D +S+F W+Y L +KSEVF F F+ V+
Sbjct: 509 NPLELIHSDVWGPASESVGAKKYYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQKLVEWQ 568
Query: 117 FGTTIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
F I +Q DWG EY + +F + H VSC H HQ
Sbjct: 569 FDRKILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQ 607
Score = 96.7 bits (239), Expect(2) = 2e-49
Identities = 62/199 (31%), Positives = 89/199 (44%)
Frame = -1
Query: 1076 VCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 897
VCQ+C K GH+A +C RY D Y P E A Y
Sbjct: 280 VCQVCHKRGHVASDCWHRYD-----------------------DSYVPDEKLGGAATYAY 316
Query: 896 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 717
+ NW D+GAT HI L L Y+ + + +G G+SI H+G++
Sbjct: 317 GIDT-------NWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGMSIKHVGHAIV 369
Query: 716 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVR 537
T S + NVLHVP+ +K ++SV + DN + E H + +KD + +L+G R
Sbjct: 370 PTPSRPLHLKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCR 429
Query: 536 N*LYDLNFDSPTFKAFVST 480
LY L S +AFV+T
Sbjct: 430 RGLYPLPARSSLRQAFVAT 448
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 133 bits (334), Expect(2) = 3e-49
Identities = 66/158 (41%), Positives = 92/158 (58%)
Frame = -3
Query: 474 SSTSWHQRLGHSSFRTLKHILSEVDASILAHLSPSLCTKC*LAKSHSLPYFSSVNKVSYG 295
S WH RL H + + ++++ S S+C C AKSH LPY S + VS
Sbjct: 418 SFARWHSRLSHPTTPIVSRVVNQNKLPCQKSHSESVCDACQKAKSHQLPYSRSTS-VSTR 476
Query: 294 PLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYF 115
PL+L++SD+W + SV G K+YVSF+D FS+FTW+Y L +KS+VF F F+A V+
Sbjct: 477 PLELVYSDVWGTAPSSVGGNKFYVSFIDDFSKFTWVYSLKHKSDVFQKFHEFQALVERLL 536
Query: 114 GTTIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
G I +Q DWG EY+ + SF + H VSC + HQ
Sbjct: 537 GHKIITMQKDWGGEYQKLHSFFDKIGISHHVSCPYAHQ 574
Score = 92.4 bits (228), Expect(2) = 3e-49
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
Frame = -1
Query: 1076 VCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 897
+CQ+C K GH+A +C R F ++Y P E A
Sbjct: 247 ICQVCYKRGHVAAKCWHR-----------------------FDENYVPDERHVAAAAQAA 283
Query: 896 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 717
Y NW DSGAT HI ++L L + +Y+ E + NG G+ I HIG++
Sbjct: 284 YAVD------TNWYIDSGATDHITSELDKLTVREKYKGTEKIHTANGVGMQIKHIGHALV 337
Query: 716 STGSSNFI-MNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGV 540
T ++ + + NVLHVP +K ++S + +DN + E H + VKD + +L+G
Sbjct: 338 HTPDNHTLHLKNVLHVPHATKNLISASRLAEDNYVFLEIHSKYFLVKDRAMRNIILKGRC 397
Query: 539 RN*LYDLNFDSPTFKAFVSTTF 474
R LY + + V+ +F
Sbjct: 398 RKGLYPFPSEDAKYVCSVAPSF 419
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 134 bits (336), Expect(2) = 5e-49
Identities = 67/155 (43%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
Frame = -3
Query: 462 WHQRLGHSSFRTLKHILSEVDASILAHLSP-SLCTKC*LAKSHSLPYFSSVNKVSYGPLD 286
WH RLGH + ++ ++S+ + LA + S+C C KSH LPY S + S+ PL+
Sbjct: 458 WHSRLGHPASPIVEKVISKNNLPCLAESNKQSVCDACQQGKSHQLPYSRSSSMSSH-PLE 516
Query: 285 LIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGTT 106
LI+SD+W + SV G +YYVSF+ +S+FTWLY + +KSEV F F+A V+ F
Sbjct: 517 LIYSDVWGPALTSVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLFNRK 576
Query: 105 IKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
I +Q+DWG EY + SF T + H VSC H HQ
Sbjct: 577 IIAMQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQ 611
Score = 90.9 bits (224), Expect(2) = 5e-49
Identities = 54/190 (28%), Positives = 85/190 (44%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQ+C K GH + C +RY + D D+ + SY +
Sbjct: 279 CQLCYKRGHTVINCWYRYDE------------------DFVPDEKYAGSATSYGI----- 315
Query: 893 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 714
NW D+ AT H+ +L L + Y+ + V +GAG+ I HIG+S
Sbjct: 316 --------DTNWYVDTSATDHVTGELDKLTVRDRYKGQDQVHTASGAGMEISHIGHSTVR 367
Query: 713 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVRN 534
T + + + N+L+VP+ +K ++S + DN+ Y E + + +KDL K L +G R
Sbjct: 368 TPNRDIHLRNILYVPNANKNLVSANRLVSDNSAYMELYSKYFNLKDLATKKLLFRGPCRG 427
Query: 533 *LYDLNFDSP 504
LY L SP
Sbjct: 428 RLYALPSSSP 437
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 131 bits (330), Expect(2) = 9e-49
Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
Frame = -3
Query: 462 WHQRLGHSSFRTLKHILSEVDASILAHLSP-SLCTKC*LAKSHSLPYFSSVNKVSYGPLD 286
WH RLGH S++ ++ ++S + L +C C KSH LP+ S + ++ PL+
Sbjct: 449 WHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKSHQLPFLKSTSASNF-PLE 507
Query: 285 LIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGTT 106
L+ SD+W SV G KYYVSF+D FS+FTW+Y L KSEVF F F+ V+ F
Sbjct: 508 LVFSDVWGPAPDSVGGRKYYVSFIDDFSKFTWIYLLKQKSEVFHKFHEFQQLVERIFYRK 567
Query: 105 IKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
I +Q DWG EY + F T + H VSC H HQ
Sbjct: 568 IIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQ 602
Score = 92.4 bits (228), Expect(2) = 9e-49
Identities = 57/185 (30%), Positives = 78/185 (42%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQ+C K+GH+ +C Y D+F D SY V
Sbjct: 276 CQLCSKVGHVVADCWHCYD-------------------DSFVPDARVAAAASYGV----- 311
Query: 893 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 714
NW D+GAT HI N+L L Y E + +G+G+ I HIG S
Sbjct: 312 --------DSNWYVDTGATDHITNELEKLTTRDRYNGKEQIHTASGSGMDIKHIGQSTIR 363
Query: 713 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVRN 534
T + N + N+LHVP K ++S + DN+ + E HP +KD LL+G N
Sbjct: 364 TPTRNLYLRNILHVPRTKKNLISAHRLAVDNHAFVEVHPRFFAIKDQITKNTLLRGPCCN 423
Query: 533 *LYDL 519
LY L
Sbjct: 424 GLYPL 428
>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] gi|31431217|gb|AAP53032.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1042
Score = 129 bits (324), Expect(2) = 9e-49
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
Frame = -3
Query: 462 WHQRLGHSSFRTLKHILSEVDASILAHLSP-SLCTKC*LAKSHSLPYFSSVNKVSYGPLD 286
WH RLGH S + ++S L + S+C C AKSH LPY +S++ VS PL+
Sbjct: 351 WHSRLGHPSIPIVMKVISSNKLPCLRESNKESVCDACQKAKSHQLPYSNSMS-VSNKPLE 409
Query: 285 LIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGTT 106
LI+SD+W S G K+YVSF+D++ +F+W+Y L +KS+VF F F+ V+ F
Sbjct: 410 LIYSDVWGPASTSFGGKKFYVSFIDSYRKFSWIYFLKHKSDVFEKFHDFQQLVERLFDRK 469
Query: 105 IKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRHEHQ 1
I +Q DWG EY+ ++SF + H VSC H HQ
Sbjct: 470 IIAMQTDWGGEYQKLNSFFEKIGISHHVSCPHTHQ 504
Score = 94.7 bits (234), Expect(2) = 9e-49
Identities = 58/196 (29%), Positives = 90/196 (45%)
Frame = -1
Query: 1076 VCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEY 897
+C +C K GH+A C RY +DY P + A
Sbjct: 177 LCHVCYKRGHVAANCWHRYD-----------------------EDYVPDDKLVAA----- 208
Query: 896 YPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHF 717
+++ + NW D+GAT HI + L LN Y+ + + +GAG+ I HIG++
Sbjct: 209 --ATYSHGADSNWYVDTGATDHITSQLEKLNTREVYKGHDQIHTASGAGMKIKHIGHAIV 266
Query: 716 STGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVR 537
T + +NNVLHVP +K ++S + DN+ + E H + +KD +L+G R
Sbjct: 267 HTPTRPLHLNNVLHVPQAAKNLISATKLASDNSVFVEIHSKYFLIKDRTTRSTVLKGPRR 326
Query: 536 N*LYDLNFDSPTFKAF 489
+ LY L S T +AF
Sbjct: 327 HGLYPLPSTSSTKQAF 342
>emb|CDY58610.1| BnaCnng33390D [Brassica napus]
Length = 856
Score = 122 bits (307), Expect(2) = 9e-49
Identities = 65/155 (41%), Positives = 96/155 (61%), Gaps = 2/155 (1%)
Frame = -3
Query: 468 TSWHQRLGHSSFRTLKHILSE--VDASILAHLSPSLCTKC*LAKSHSLPYFSSVNKVSYG 295
+SWH RLGH S L+ ++S + S +H S C+ C + KSH LP++S+ S
Sbjct: 246 SSWHARLGHPSNTVLQTLVSHFSLPLSTTSH-KQSPCSHCLINKSHKLPFYSNTIH-SQK 303
Query: 294 PLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYF 115
PL+ ++SD+W SP+ SV+ FKYY+ FVD ++R+TWLYPL KS+V TF FKA V+N F
Sbjct: 304 PLEYVYSDVWTSPLISVDNFKYYLVFVDHYTRYTWLYPLKQKSQVRDTFIAFKAIVENRF 363
Query: 114 GTTIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRH 10
T + L ++ G E+ + FL+ + + H S H
Sbjct: 364 QTKLMTLYSENGGEFIALRQFLSTHGISHLTSPPH 398
Score = 101 bits (251), Expect(2) = 9e-49
Identities = 61/184 (33%), Positives = 92/184 (50%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQIC GH A C +++S+Y+ + + W + A + Y
Sbjct: 58 CQICGIFGHSARRCP--QFQTSSNYSNTASSQYSSSPAP------WQQPRANMAAMS-YN 108
Query: 893 PSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNSHFS 714
P+ NW DSGAT+H+ DL +L+ H Y E V + +G+GL I H G+S +
Sbjct: 109 PN--------NWILDSGATHHLTTDLNNLSFHQPYNGGEEVVIADGSGLPISHTGSSSLT 160
Query: 713 TGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGGVRN 534
T S + +NN+L VP++ K ++SV + N EF P+H VKDL LLQG ++
Sbjct: 161 TPSRSLALNNILFVPNLHKNLISVYRLCNTNKVSVEFFPAHFQVKDLSTGARLLQGRTKD 220
Query: 533 *LYD 522
LY+
Sbjct: 221 ELYE 224
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 121 bits (304), Expect(2) = 2e-48
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Frame = -3
Query: 465 SWHQRLGHSSFRTLKHILSEVDASILAHLSPSL-CTKC*LAKSHSLPYFSSVNKVSYGPL 289
SWH RLGH S LK ++S+ I L L C+ C + KSH LP++S+ S+ PL
Sbjct: 468 SWHARLGHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSH-PL 526
Query: 288 DLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGT 109
+ +++D+W SP+ S++ +KYY+ VD ++R+TWLYPL KS+V F TF A V+N F
Sbjct: 527 EYLYTDVWTSPITSIDNYKYYLVIVDHYTRYTWLYPLRKKSQVREMFITFTALVENKFKF 586
Query: 108 TIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRH 10
I L +D G E+ + SFL ++ + H + H
Sbjct: 587 KIGTLYSDNGGEFIAMRSFLASHGISHMTTPPH 619
Score = 101 bits (251), Expect(2) = 2e-48
Identities = 68/189 (35%), Positives = 92/189 (48%), Gaps = 5/189 (2%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQIC GH A C Q H GSY + S A Y +
Sbjct: 280 CQICSVHGHSARRC---------PQLQQHA-----GSYAS--------NQSSSASYAPWQ 317
Query: 893 P-----SSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIG 729
P S+ P SG NW DSGAT+H+ +DL +L LH Y E V + +G+GL I H G
Sbjct: 318 PRANMVSATPYNSG-NWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSG 376
Query: 728 NSHFSTGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQ 549
++ T + + + +VL+VPD+ K ++SV + N EF P+H VKDL LLQ
Sbjct: 377 SALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQ 436
Query: 548 GGVRN*LYD 522
G +N LY+
Sbjct: 437 GKTKNELYE 445
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 121 bits (304), Expect(2) = 2e-48
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Frame = -3
Query: 465 SWHQRLGHSSFRTLKHILSEVDASILAHLSPSL-CTKC*LAKSHSLPYFSSVNKVSYGPL 289
SWH RLGH S LK ++S+ I L L C+ C + KSH LP++S+ S+ PL
Sbjct: 468 SWHARLGHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSH-PL 526
Query: 288 DLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGT 109
+ +++D+W SP+ S++ +KYY+ VD ++R+TWLYPL KS+V F TF A V+N F
Sbjct: 527 EYLYTDVWTSPITSIDNYKYYLVIVDHYTRYTWLYPLRKKSQVREMFITFTALVENKFKF 586
Query: 108 TIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRH 10
I L +D G E+ + SFL ++ + H + H
Sbjct: 587 KIGTLYSDNGGEFIAMRSFLASHGISHMTTPPH 619
Score = 101 bits (251), Expect(2) = 2e-48
Identities = 68/189 (35%), Positives = 92/189 (48%), Gaps = 5/189 (2%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQIC GH A C Q H GSY + S A Y +
Sbjct: 280 CQICSVHGHSARRC---------PQLQQHA-----GSYAS--------NQSSSASYAPWQ 317
Query: 893 P-----SSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIG 729
P S+ P SG NW DSGAT+H+ +DL +L LH Y E V + +G+GL I H G
Sbjct: 318 PRANMVSATPYNSG-NWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSG 376
Query: 728 NSHFSTGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQ 549
++ T + + + +VL+VPD+ K ++SV + N EF P+H VKDL LLQ
Sbjct: 377 SALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQ 436
Query: 548 GGVRN*LYD 522
G +N LY+
Sbjct: 437 GKTKNELYE 445
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 124 bits (312), Expect(2) = 3e-48
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 3/161 (1%)
Frame = -3
Query: 474 SSTSWHQRLGHSSFRTLKHILSEVDASILAHLSP-SLCTKC*LAKSHSLPYFSSVNKVSY 298
++ +WH RLGH S + S+ + C+ C L K+ LP+ S + S
Sbjct: 456 NADTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESSRQSSV 515
Query: 297 GPLDLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNY 118
PL LIHSD+W SPV+S G YYV F+D +SR++WLYPL KS+VF+TF FK +
Sbjct: 516 -PLALIHSDVWVSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFATFVKFKTIAEKL 574
Query: 117 FGTTIKMLQNDWGSEY--RNVSSFLTNYEVLHRVSCRHEHQ 1
F T+IK +Q D G E+ FLT + HR++C H Q
Sbjct: 575 FSTSIKQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHTSQ 615
Score = 97.4 bits (241), Expect(2) = 3e-48
Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Frame = -1
Query: 1076 VCQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFY--DDYWP*ETESYAVYN 903
VCQIC K GH A++C R+ D SY + D E+ A ++
Sbjct: 274 VCQICGKSGHTAIDCFHRF----------------DYSYQGRFPPQDLAAMVAETNATFD 317
Query: 902 EYYPSSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIGNS 723
+ W DSGA HI +D +L + +E V VGNG+GL + + G++
Sbjct: 318 H-----------QVWYMDSGANAHITSDATNLTHQQPFCESETVTVGNGSGLQVLNTGST 366
Query: 722 HFSTGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQGG 543
F+ G SNF +N +LH P + ++S+ QF DNNCYF + VK+ + LLQG
Sbjct: 367 TFNFGQSNFHLNKILHCPQAATNLISINQFCLDNNCYFILTANGFVVKENLTGRILLQGV 426
Query: 542 VRN*LYDL 519
V N LY L
Sbjct: 427 VENGLYPL 434
Score = 63.2 bits (152), Expect = 8e-07
Identities = 32/93 (34%), Positives = 51/93 (54%)
Frame = -2
Query: 1831 NPDYLEWIHQDQLLLSWLISCLSDETHFSIVGSTSSLTA*QTLENNYNSSVKSRLMQLKN 1652
NP Y+ W +D LL W+++ LS++ +I G +S L+ ++S +SR+ LK
Sbjct: 68 NPAYVVWQKKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRFSSQSRSRISHLKR 127
Query: 1651 DLQHLRKGNESMQVYFSRAKSIDHQLAQVSRPV 1553
LQ L +G +S Y AK++ QLA +PV
Sbjct: 128 QLQTLTQGTKSCSEYLESAKTLADQLAAAGKPV 160
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 121 bits (304), Expect(2) = 8e-48
Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Frame = -3
Query: 465 SWHQRLGHSSFRTLKHILSEVDASILAHLSPSL-CTKC*LAKSHSLPYFSSVNKVSYGPL 289
SWH RLGH S LK ++S+ I L L C+ C + KSH LP++S+ S+ PL
Sbjct: 468 SWHARLGHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSH-PL 526
Query: 288 DLIHSDIWCSPVKSVNGFKYYVSFVDTFSRFTWLYPLANKSEVFSTF*TFKAHVKNYFGT 109
+ +++D+W SP+ S++ +KYY+ VD ++R+TWLYPL KS+V F TF A V+N F
Sbjct: 527 EYLYTDVWTSPITSIDNYKYYLVIVDHYTRYTWLYPLRKKSQVREMFITFTALVENKFKF 586
Query: 108 TIKMLQNDWGSEYRNVSSFLTNYEVLHRVSCRH 10
I L +D G E+ + SFL ++ + H + H
Sbjct: 587 KIGTLYSDNGGEFIAMRSFLASHGISHMTTPPH 619
Score = 99.4 bits (246), Expect(2) = 8e-48
Identities = 67/189 (35%), Positives = 92/189 (48%), Gaps = 5/189 (2%)
Frame = -1
Query: 1073 CQICIKLGHLALECRFRYHKSASDYTQAHNVYFDDGSYDTFYDDYWP*ETESYAVYNEYY 894
CQIC GH A C Q H GSY + S A Y +
Sbjct: 280 CQICSVHGHSARRC---------PQLQQHA-----GSYAS--------NQSSSASYAPWQ 317
Query: 893 P-----SSFPSTSGENWTPDSGATYHIKNDLGSLNLHSEYQRAE*VKVGNGAGLSIHHIG 729
P S+ P SG NW DSGAT+H+ ++L +L LH Y E V + +G+GL I H G
Sbjct: 318 PRANMVSATPYNSG-NWLLDSGATHHLTSNLNNLALHQPYNGDEEVTIADGSGLPISHSG 376
Query: 728 NSHFSTGSSNFIMNNVLHVPDMSKKMLSVLQFTKDNNCYFEFHPSHVCVKDLHIHKELLQ 549
++ T + + + +VL+VPD+ K ++SV + N EF P+H VKDL LLQ
Sbjct: 377 SALLPTPTRSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQ 436
Query: 548 GGVRN*LYD 522
G +N LY+
Sbjct: 437 GKTKNELYE 445