BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00009796
         (2053 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                       426   0.0  
gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc...   397   e-179
gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               436   e-179
gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|16...   407   e-176
gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]   404   e-176
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]   418   e-175
gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subc...   407   e-174
gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [...   407   e-174
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc...   404   e-173
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   414   e-173
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc...   402   e-173
gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sa...   402   e-173
gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]     403   e-173
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc...   403   e-173
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo...   403   e-173
gb|ABF94664.1| retrotransposon protein, putative, Ty1-copia subc...   406   e-172
gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group...   403   e-172
dbj|BAB03249.1| polyprotein [Oryza sativa]                            401   e-172
gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japo...   404   e-172
gb|AAL31653.1|AC079179_8 Putative polyprotein from transposon TN...   402   e-172

>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score =  426 bits (1096), Expect(3) = 0.0
 Identities = 211/354 (59%), Positives = 260/354 (73%), Gaps = 4/354 (1%)
 Frame = -3

Query: 1052 VPSTSQPPSLDAETE----PRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMTSPEAPFW 885
            + S  QP  +  E +    P+RSKR R EK FG DF+   V   P T  EA  S +A  W
Sbjct: 709  IESFEQPHEIVLEEDDNDAPKRSKRQRVEKSFGDDFIVYLVDDTPTTIAEAFASSDADDW 768

Query: 884  EEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLVAKGYRQQ 705
            +EA +NE DSI  N TWE+ D P G K +GCKWVFK+ L+ DGTIEK+KARLVAKGY Q+
Sbjct: 769  KEAVHNEMDSILSNGTWEITDRPYGCKPVGCKWVFKKKLKPDGTIEKYKARLVAKGYTQK 828

Query: 704  EGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMDQPEGFVV 525
            EG DFFDTYSPV  +T+IR+L+++A+ Y L +HQMDVKTAFL GEL+EEIYM+QP+GFVV
Sbjct: 829  EGEDFFDTYSPVARMTTIRVLLSLAASYGLLVHQMDVKTAFLNGELDEEIYMEQPDGFVV 888

Query: 524  KGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDDSHVIVCL 345
            KG E KVCKL KSLYGLKQAPKQWHEKF+  + S GF +NE+D+CVY +      VI+CL
Sbjct: 889  KGQESKVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFAINEADRCVYYRCGGGEGVILCL 948

Query: 344  YVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFDGYSLSQSHYVETV 165
            YVDD+LI G+N+D IN  KS L+++FDMKDLG ADVIL +K+ K   G +LSQSHYVE V
Sbjct: 949  YVDDILIFGTNIDVINEVKSFLSKSFDMKDLGEADVILNIKLIKADGGITLSQSHYVEKV 1008

Query: 164  LKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPDIA 3
            LKRF     KP+ TPYDP+  L+ NK  G+ QL YS+++GSLMYL   TRPDI+
Sbjct: 1009 LKRFGFSECKPSPTPYDPSVTLRKNKRIGLDQLRYSQIVGSLMYLAGATRPDIS 1062



 Score =  154 bits (388), Expect(3) = 0.0
 Identities = 75/125 (60%), Positives = 96/125 (76%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGK++++T IDD SR+C VYLL++KD+ALD FK+YK EVENQ    IK LRSDRGGE+
Sbjct: 467  TKGGKRYFMTLIDDASRFCYVYLLKTKDEALDYFKIYKAEVENQLERKIKRLRSDRGGEF 526

Query: 1554 VIPI-GEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
               +  +FC  +GIIHE T P SPESNG+AERKNRTL D+VNAML + GL    W EA+L
Sbjct: 527  FPKVFDDFCAEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTCGLSKAWWGEAVL 586

Query: 1377 YACYI 1363
             +C++
Sbjct: 587  TSCHV 591



 Score =  122 bits (307), Expect(3) = 0.0
 Identities = 56/96 (58%), Positives = 69/96 (71%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LNR+P  K +KTPYE W GR+PS +Y + WGC+AKV  P +KK K+GP+TVDCVFLGY  
Sbjct: 592  LNRIPMGKEEKTPYEKWVGRKPSLSYLRTWGCMAKVNVPINKKRKLGPRTVDCVFLGYAS 651

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
             + AYRF+V+         +TIMESRD  FFEHIFP
Sbjct: 652  CSIAYRFLVVKSEVPDVYVDTIMESRDATFFEHIFP 687



 Score = 63.9 bits (154), Expect = 5e-07
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
 Frame = -1

Query: 2053 YNCGKTGHMAKDC--RAXXXXXXXXXXXXKANVVDDSGYFTGMVSEVNLVSNVTNVRDWW 1880
            + CG+ GH AKDC  RA             A+  +D GY       +  + +V     WW
Sbjct: 209  FACGEAGHFAKDCPDRADRRGKKGNVNTVIASNEEDKGY-----GNLPFIFSVFQSPSWW 263

Query: 1879 LDSGATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            LD+GA  HVC   N FSSY    D   L MGN S + V G G V++
Sbjct: 264  LDTGANVHVCSDINLFSSYQGARDSSVL-MGNGSHASVHGTGTVDL 308


>gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1075

 Score =  397 bits (1019), Expect(3) = e-179
 Identities = 198/342 (57%), Positives = 249/342 (72%)
 Frame = -3

Query: 1028 SLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMTSPEAPFWEEASNNEWDSIQ 849
            S D     RRSKR RTEK FG DF+   V   P T  EA  S EA +W+EA  +E DSI 
Sbjct: 648  SSDDSLNLRRSKRSRTEKTFGDDFIIYLVDDVPSTLSEAFASAEAAYWKEAVQSEMDSIL 707

Query: 848  QNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLVAKGYRQQEGLDFFDTYSPV 669
             N TWE+  LP G + IG + +  + L+ DGTI+K KARLVAKGY Q++G D+FDT+SPV
Sbjct: 708  SNGTWEITHLPQGYRAIGYRAIGCKKLKPDGTIDKFKARLVAKGYTQRQGEDYFDTFSPV 767

Query: 668  TIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMDQPEGFVVKGYEDKVCKLKK 489
              + +IR L+A+A+ Y   IHQMDVKTAFL GEL EEIYM QP+GFV+ G EDKVCKL+K
Sbjct: 768  AHMPTIRALVALAAAYGYKIHQMDVKTAFLNGELEEEIYMQQPDGFVIPGQEDKVCKLEK 827

Query: 488  SLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDDSHVIVCLYVDDMLILGSNL 309
            SLYGLKQAP QWHEKF+  +IS GF VN++DKCVY +   D  VI+CLYVDD+LILG+NL
Sbjct: 828  SLYGLKQAPMQWHEKFDKTLISAGFTVNDADKCVYSRFDGDIGVILCLYVDDILILGTNL 887

Query: 308  DSINTTKSMLNENFDMKDLGPADVILGMKIRKMFDGYSLSQSHYVETVLKRFNHENAKPA 129
            + I+  KS L+  FDMKDLG A VIL +KI+K   G+ L+QSHYVE +L RF H N+K  
Sbjct: 888  NIISEIKSYLSNKFDMKDLGEAKVILNIKIQKKDKGFELNQSHYVEKLLHRFGHFNSKST 947

Query: 128  TTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPDIA 3
             TPYDP  KL  N+G+G+ Q++++++IGSLMYL N TRP+I+
Sbjct: 948  ATPYDPCLKLHKNQGQGLDQVKFAQIIGSLMYLANTTRPNIS 989



 Score =  160 bits (404), Expect(3) = e-179
 Identities = 76/125 (60%), Positives = 102/125 (81%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GG++++ITFIDD S+YC VYLLR+KD+A + FK++K E ENQ  + IK LRSDRGGEY
Sbjct: 408  TKGGRRYFITFIDDCSKYCYVYLLRTKDEAFEHFKIFKAEAENQLDLKIKILRSDRGGEY 467

Query: 1554 V-IPIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
            + I   +F + +GIIHETT P SP+SNGVAERKNRTL ++VNAML++SGLP+ +W EA+ 
Sbjct: 468  LSIEFSKFHQEHGIIHETTPPYSPQSNGVAERKNRTLTNLVNAMLSNSGLPNYMWGEALY 527

Query: 1377 YACYI 1363
             AC++
Sbjct: 528  TACFV 532



 Score =  125 bits (315), Expect(3) = e-179
 Identities = 59/96 (61%), Positives = 72/96 (75%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LNRVP K ++ TPYELWKGR+P+  + KVWGCLAKV  P  KK K+GPKTVDCVF+GY +
Sbjct: 533  LNRVPAKGTEVTPYELWKGRKPNLNFLKVWGCLAKVNIPVVKKRKLGPKTVDCVFIGYAQ 592

Query: 1183 HTSAYRFMV-------IGENTIMESRDTVFFEHIFP 1097
            ++ AYRF+V       + ENT+MESRDT FFE  FP
Sbjct: 593  NSLAYRFLVVKSETTEVRENTVMESRDTTFFEDTFP 628


>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  436 bits (1122), Expect(3) = e-179
 Identities = 216/364 (59%), Positives = 277/364 (76%), Gaps = 5/364 (1%)
 Frame = -3

Query: 1079 KRVRDDLSDVPSTSQPPSLDAET---EPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAM 909
            +R+  ++  +PS+S     + E    E RRSKR R EK FGPDF    V  +  T KEA+
Sbjct: 732  QRIEQNILTLPSSSTSTLKNKEVNDFELRRSKRARVEKDFGPDFYVFNVGDDRLTLKEAL 791

Query: 908  TSPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARL 729
            +S ++ FW+EA N+E +S+  N+TW+LVDLPPG KTIGCKWV ++ L+ DG+I+K+KARL
Sbjct: 792  SSHDSIFWKEAVNDEMESLISNKTWKLVDLPPGCKTIGCKWVLRKKLKPDGSIDKYKARL 851

Query: 728  VAKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYM 549
            VAKG++Q EGL+FFDT+SPVT ITSIR+LIA+A+I+DL IHQMDVKTAFL G+LNEEIYM
Sbjct: 852  VAKGFKQLEGLEFFDTFSPVTRITSIRLLIAMAAIFDLQIHQMDVKTAFLNGDLNEEIYM 911

Query: 548  DQPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVD 369
            DQPE FV  G E KVCKL KSLYGLKQAPKQWHEKF+  MI NGFK NE DKC+Y KS +
Sbjct: 912  DQPESFVEAGQESKVCKLTKSLYGLKQAPKQWHEKFDSCMIENGFKTNECDKCIYHKSWN 971

Query: 368  DSHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFDGYSLS 189
            +SHVI+CLYVDD+LI GSN++ I+ TK++L  +FDMKDLG A+VILG+KI +  DG  L 
Sbjct: 972  NSHVIICLYVDDLLIFGSNINVIDETKNILRSHFDMKDLGEANVILGIKITRTCDGIFLD 1031

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKL--KNNKGEGIYQLEYSRVIGSLMYLMNCTR 15
            QSHYVE +LK++N  + K   TP+D +  L    ++ + I Q EY+ +IGSL Y+ +CTR
Sbjct: 1032 QSHYVEKILKKYNFLDCKHVATPFDSSVHLFPVESENDVINQKEYASIIGSLRYVTDCTR 1091

Query: 14   PDIA 3
            PDIA
Sbjct: 1092 PDIA 1095



 Score =  141 bits (355), Expect(3) = e-179
 Identities = 72/125 (57%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            TRGG +++ITFIDD S++  VYL+++K  A + FK Y  EVENQ G  IK +RSDRG EY
Sbjct: 510  TRGGNRYFITFIDDFSKFTYVYLMKNKSDAFENFKTYLHEVENQFGRKIKRIRSDRGREY 569

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   F +  GIIHETT P SP SNGVAERKNRTL+++ NAML  S  P N W EAIL
Sbjct: 570  ESNEFNSFVRSLGIIHETTPPYSPSSNGVAERKNRTLVELTNAMLIESHAPLNFWGEAIL 629

Query: 1377 YACYI 1363
             ACY+
Sbjct: 630  TACYV 634



 Score =  103 bits (256), Expect(3) = e-179
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LNRVP KKS  TP+ELWKG +PS  Y +VWGCLA V     K TK+G K   C FLGY  
Sbjct: 635  LNRVPHKKSKLTPFELWKGYKPSLGYLRVWGCLAFVRLMDPKITKLGKKVTTCAFLGYAS 694

Query: 1183 HTSAYRFMVIGENTIMESRDTVFFEHIFP 1097
            +++AYRF  + +N ++ES D +F E+ FP
Sbjct: 695  NSTAYRFFNLEDNIVIESGDAIFHENKFP 723



 Score = 71.6 bits (174), Expect = 3e-09
 Identities = 36/102 (35%), Positives = 59/102 (57%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKANVVDDSGYFTGMVSEVNLVSNVTNVRDWWLDSG 1868
            CGK+GH+A+ CR             +ANV ++   F  +++++N+V NV     WW DSG
Sbjct: 266  CGKSGHIARFCR-----FRKRGPNPQANVTEEP--FVAVITDINMVENVDG---WWADSG 315

Query: 1867 ATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            A RHVC  ++ F  Y    + + + +G+S T++V+G G VE+
Sbjct: 316  ANRHVCYDKDWFKKYTHFEEPKTIMLGDSHTTQVLGTGDVEL 357


>gb|AAK73108.1|AF391808_10 Fourf gag/pol protein [Zea mays] gi|168251067|gb|ACA21850.1| Fourf
            gag/pol protein [Zea mays]
          Length = 1279

 Score =  407 bits (1046), Expect(3) = e-176
 Identities = 204/344 (59%), Positives = 251/344 (72%), Gaps = 1/344 (0%)
 Frame = -3

Query: 1031 PSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMTSPEAPFWEEASNNEWDSI 852
            P  D     R+SKR R  K FG DF+   V+  P T  EA +SP+A  W+EA  +E +SI
Sbjct: 734  PEEDDTIVTRKSKRQRVAKSFGNDFIVYLVEDTPTTISEAYSSPDADLWKEAVRSEMESI 793

Query: 851  QQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLVAKGYRQQEGLDFFDTYSP 672
              N TWE+VD P G + IGCKW+FK+ LR DGTIE++KARLVAKGY Q+EG DFFDTYSP
Sbjct: 794  MSNGTWEVVDRPYGCQPIGCKWIFKKKLRPDGTIERYKARLVAKGYTQKEGEDFFDTYSP 853

Query: 671  VTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMDQPEGFVVKGYEDKVCKLK 492
            V  +T+IR LIA+A+ Y L IHQMDVKTAFL GEL+EEIYMDQPEGF+  G E+KVC+L 
Sbjct: 854  VARLTTIRTLIAVAASYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENKVCRLI 913

Query: 491  KSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDDSHVIVCLYVDDMLILGSN 312
            KSLYGLKQAPKQWHEKF++ + + GF VNESD CVY +      V++CLYVDD+LI GSN
Sbjct: 914  KSLYGLKQAPKQWHEKFDNTLTAAGFVVNESDTCVYYRYGGGESVMLCLYVDDILIFGSN 973

Query: 311  LDSINTTKSMLNENFDMKDLGPADVILGMK-IRKMFDGYSLSQSHYVETVLKRFNHENAK 135
            L+ I   K++L+ NF+MKDLG ADVIL +K +RK   G +L QSHYVE VL RF   +  
Sbjct: 974  LNVIEEVKNLLSSNFEMKDLGEADVILNIKLVRKADGGVTLLQSHYVEKVLSRFGFSDCD 1033

Query: 134  PATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPDIA 3
            PA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPDI+
Sbjct: 1034 PAPTPYDPSVLLRKNRRIARDQLTYSQIIGSLMYLASATRPDIS 1077



 Score =  154 bits (389), Expect(3) = e-176
 Identities = 75/125 (60%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGK++++TFIDD +R+C VYLL++KD+A + FK YK EVENQ    IK LRSDRGGE+
Sbjct: 479  TKGGKRYFLTFIDDSTRFCYVYLLKTKDEAFNYFKAYKAEVENQLERKIKRLRSDRGGEF 538

Query: 1554 VIPI-GEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
               +  EFC  +GIIHE T P SP+SNG+AERKNRTL D+VNAML+++GL    W EAIL
Sbjct: 539  FSNLFDEFCVEHGIIHERTPPFSPQSNGIAERKNRTLTDLVNAMLSTAGLSKAWWGEAIL 598

Query: 1377 YACYI 1363
             AC++
Sbjct: 599  IACHV 603



 Score =  110 bits (274), Expect(3) = e-176
 Identities = 51/96 (53%), Positives = 67/96 (69%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LNRVP K  + TP+E W+ R+ + +Y + WGCLAKV  P +KK K+GPKTVDC+FLGY  
Sbjct: 604  LNRVPTKNKEITPFEEWEKRKLNLSYLRTWGCLAKVNVPINKKRKLGPKTVDCIFLGYSF 663

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H++ YRF++I         +TIMESRD  FFE+ FP
Sbjct: 664  HSTGYRFLIIKSDVPDMYVDTIMESRDATFFENEFP 699


>gb|AAL75486.1|AF466202_12 putative Fourf gag/pol protein [Zea mays]
          Length = 1292

 Score =  404 bits (1039), Expect(3) = e-176
 Identities = 203/344 (59%), Positives = 250/344 (72%), Gaps = 1/344 (0%)
 Frame = -3

Query: 1031 PSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMTSPEAPFWEEASNNEWDSI 852
            P  D     R+SKR R  K FG DF+   V+  P T  EA  SP+A  W+EA  +E +SI
Sbjct: 774  PEEDDTIVTRKSKRQRVAKSFGNDFIVYLVEDTPTTISEAYFSPDADLWKEAVRSEMESI 833

Query: 851  QQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLVAKGYRQQEGLDFFDTYSP 672
              N TWE+VD P G + IGCKW+FK+ LR DGTIE++KARLVAKGY Q+EG DFFDTYSP
Sbjct: 834  MSNGTWEVVDRPYGCQPIGCKWIFKKKLRPDGTIERYKARLVAKGYTQKEGEDFFDTYSP 893

Query: 671  VTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMDQPEGFVVKGYEDKVCKLK 492
            V  +T+IR LIA+A+ Y L IHQMDVKTAFL GEL+EEIYMDQPEGF+  G E+KVC+L 
Sbjct: 894  VARLTTIRTLIAVAASYGLIIHQMDVKTAFLNGELDEEIYMDQPEGFIADGQENKVCRLI 953

Query: 491  KSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDDSHVIVCLYVDDMLILGSN 312
            KSLYGLKQAPKQWHEKF++ + + GF VNESD CVY +      V++CLYVDD+LI GSN
Sbjct: 954  KSLYGLKQAPKQWHEKFDNTLTAAGFVVNESDTCVYYRYGGGESVMLCLYVDDILIFGSN 1013

Query: 311  LDSINTTKSMLNENFDMKDLGPADVILGMK-IRKMFDGYSLSQSHYVETVLKRFNHENAK 135
            L+ I   K++L+ NF+MKDLG ADVIL +K +R+   G +L QSHYVE VL RF   +  
Sbjct: 1014 LNVIEEVKNLLSSNFEMKDLGEADVILNIKLVREADGGVTLLQSHYVEKVLSRFGFSDCD 1073

Query: 134  PATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPDIA 3
            PA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPDI+
Sbjct: 1074 PAPTPYDPSVLLRKNRRIARDQLTYSQIIGSLMYLASATRPDIS 1117



 Score =  155 bits (393), Expect(3) = e-176
 Identities = 76/125 (60%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGK++++TFIDD +R+C VYLL++KD+A + FK YK EVENQ    IK LRSDRGGEY
Sbjct: 519  TKGGKRYFLTFIDDSTRFCYVYLLKTKDEAFNYFKAYKAEVENQLERKIKRLRSDRGGEY 578

Query: 1554 VIPI-GEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
               +  EFC  +GIIHE T P SP+SNG+AERKNRTL D+VNAML+++GL    W EAIL
Sbjct: 579  FSNVFDEFCVEHGIIHERTPPFSPQSNGIAERKNRTLTDLVNAMLSTAGLSKAWWGEAIL 638

Query: 1377 YACYI 1363
             AC++
Sbjct: 639  TACHV 643



 Score =  110 bits (275), Expect(3) = e-176
 Identities = 52/96 (54%), Positives = 67/96 (69%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LNRVP K  + TP+E W+ R+ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 644  LNRVPTKNKEITPFEEWEKRRLNLSYLRTWGCLAKVNVPINKKRKLGPKTVDCVFLGYSF 703

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H++ YRF++I         +TIMESRD  FFE+ FP
Sbjct: 704  HSTGYRFLIIKSDVPDMYVDTIMESRDATFFENEFP 739


>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
          Length = 1105

 Score =  418 bits (1074), Expect(3) = e-175
 Identities = 206/385 (53%), Positives = 268/385 (69%), Gaps = 30/385 (7%)
 Frame = -3

Query: 1067 DDLSDVP-----STSQPPS--LDAETEPRRSKRVRTEKGFGPDFV--------------- 954
            D  S VP     S  + PS  ++    PR+S+R R EK  G D +               
Sbjct: 519  DSNSQVPTSVGESLEETPSKVIEQPIVPRKSQRARKEKVLGSDEIDSQRISFYLVEGNRE 578

Query: 953  --------TLTVKSEPQTYKEAMTSPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTI 798
                     L ++ +P+TYKEAM S +  FW+EA N+E DSI  N+TWELVDLPPGSK I
Sbjct: 579  DIIRKIPIVLQIEEDPKTYKEAMASRDVAFWKEAINDEMDSIMSNQTWELVDLPPGSKPI 638

Query: 797  GCKWVFKR*LRTDGTIEKHKARLVAKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYD 618
            GCKWVF+R   TDG I+  KARLVAKG++Q+EG+D+FDTY+PV   TSIR+L A+ASI++
Sbjct: 639  GCKWVFRRKYHTDGMIQTFKARLVAKGFKQREGIDYFDTYAPVARTTSIRILFALASIHN 698

Query: 617  LHIHQMDVKTAFLYGELNEEIYMDQPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFN 438
            L +HQMDVKTAFL G+LNEE+YM+QPEGFV+ G E+KVCKL KSLYGLKQAPKQWHEKF+
Sbjct: 699  LFVHQMDVKTAFLNGDLNEEVYMEQPEGFVLPGNENKVCKLVKSLYGLKQAPKQWHEKFD 758

Query: 437  HVMISNGFKVNESDKCVYIKSVDDSHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMK 258
            H ++S+GF+ N +DKC+Y K+ +D  +IVCLYVDDMLIL  ++  I  TK  L+  F MK
Sbjct: 759  HAILSBGFRHNNADKCLYSKTCBDYMIIVCLYVDDMLILSDDMRGIIETKRFLSSTFKMK 818

Query: 257  DLGPADVILGMKIRKMFDGYSLSQSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEG 78
            DLG  D ILG+K+++   GY+L+Q+HY+E V+ +F+H   K A TP+D + KL+ N G  
Sbjct: 819  DLGEVDTILGIKVKRNSGGYALNQTHYIEKVVSKFSHLKIKDANTPFDSSIKLEKNDGRS 878

Query: 77   IYQLEYSRVIGSLMYLMNCTRPDIA 3
            + QLEY+  IGSLMY   CTR DI+
Sbjct: 879  VAQLEYASAIGSLMYAAQCTRADIS 903



 Score =  146 bits (368), Expect(3) = e-175
 Identities = 71/125 (56%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            TRGG  +++TFID+ SR+  V+LL++K +  +AFK+YK EVENQ G  IK LRSDRGGEY
Sbjct: 305  TRGGNXYFJTFIDBXSRFTYVFLLKNKSETFNAFKVYKTEVENQLGKNIKVLRSDRGGEY 364

Query: 1554 V-IPIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE TAP +P+ NG+AERKNRT ++MVNAML  + L  NLW EA+ 
Sbjct: 365  FSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWGEALF 424

Query: 1377 YACYI 1363
             AC+I
Sbjct: 425  TACHI 429



 Score =  103 bits (256), Expect(3) = e-175
 Identities = 43/87 (49%), Positives = 61/87 (70%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LNR+P KK++ +PYELWKGR+P+  YFKVWGCLA        KTK+ P+ + C F+GY  
Sbjct: 430  LNRIPMKKNEISPYELWKGRKPNIGYFKVWGCLAYCKKTDPNKTKLXPRAIKCAFVGYAS 489

Query: 1183 HTSAYRFMVIGENTIMESRDTVFFEHI 1103
            ++ AYR + +  N I+ESR+  FFE++
Sbjct: 490  NSKAYRLLDLEXNXIIESREVEFFENL 516


>gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1457

 Score =  407 bits (1045), Expect(3) = e-174
 Identities = 202/362 (55%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       D  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 894  PHEHFAPIEHDDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 953

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 954  SPDADYWKEAVRSEMDSIMSNGTWEVVEHPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 1013

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 1014 AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 1073

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 1074 QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 1133

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 1134 EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 1193

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDPN  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1194 QSHYVDKVLSRFGYSDCKPAPTPYDPNVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1253

Query: 8    IA 3
            I+
Sbjct: 1254 IS 1255



 Score =  150 bits (379), Expect(3) = e-174
 Identities = 75/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 659  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEY 718

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE + P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 719  FSNEFASFCEEFGIIHEMSPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 778

Query: 1377 YACYI 1363
             AC++
Sbjct: 779  TACHV 783



 Score =  106 bits (264), Expect(3) = e-174
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 784  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 843

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI+ESRD  FFE+ FP
Sbjct: 844  HSVGYRFLIVNSGVPDMHAGTILESRDATFFENEFP 879



 Score = 64.3 bits (155), Expect = 4e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKAN-VVDDSGYFTGMVSEVNLVSNVTNVRDWWLDS 1871
            CGK+GH AKDC               AN ++ + G  +G    +  V +V +  DWW+D+
Sbjct: 406  CGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDT 458

Query: 1870 GATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            GA  HVC   + FSSY +VG    L MGN S + V G G V++
Sbjct: 459  GANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDL 500


>gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [Oryza sativa Japonica Group]
          Length = 804

 Score =  407 bits (1045), Expect(3) = e-174
 Identities = 202/362 (55%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       D  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 241  PHEHFAPIEHDDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 300

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 301  SPDADYWKEAVRSEMDSIMSNGTWEVVEHPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 360

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 361  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 420

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 421  QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 480

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 481  EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 540

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDPN  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 541  QSHYVDKVLSRFGYSDCKPAPTPYDPNVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 600

Query: 8    IA 3
            I+
Sbjct: 601  IS 602



 Score =  150 bits (379), Expect(3) = e-174
 Identities = 75/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 6    TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEY 65

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE + P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 66   FSNEFASFCEEFGIIHEMSPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 125

Query: 1377 YACYI 1363
             AC++
Sbjct: 126  TACHV 130



 Score =  106 bits (264), Expect(3) = e-174
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 131  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 190

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI+ESRD  FFE+ FP
Sbjct: 191  HSVGYRFLIVNSGVPDMHAGTILESRDATFFENEFP 226


>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1303

 Score =  404 bits (1037), Expect(3) = e-173
 Identities = 201/362 (55%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 850  PHEHFAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 909

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 910  SPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 969

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L IHQMDVKTAFL GEL EEIYMD
Sbjct: 970  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLIHQMDVKTAFLNGELEEEIYMD 1029

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 1030 QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 1089

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 1090 EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 1149

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1150 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1209

Query: 8    IA 3
            I+
Sbjct: 1210 IS 1211



 Score =  152 bits (383), Expect(3) = e-173
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 615  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEY 674

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 675  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 734

Query: 1377 YACYI 1363
             AC++
Sbjct: 735  TACHV 739



 Score =  106 bits (264), Expect(3) = e-173
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 740  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 799

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI+ESRD  FFE+ FP
Sbjct: 800  HSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFP 835



 Score = 64.3 bits (155), Expect = 4e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKAN-VVDDSGYFTGMVSEVNLVSNVTNVRDWWLDS 1871
            CGK+GH AKDC               AN ++ + G  +G    +  V +V +  DWW+D+
Sbjct: 362  CGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDT 414

Query: 1870 GATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            GA  HVC   + FSSY +VG    L MGN S + V G G V++
Sbjct: 415  GANIHVCADISLFSSY-QVGRGSSLLMGNESLAAVHGVGTVDL 456


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  414 bits (1063), Expect(3) = e-173
 Identities = 208/385 (54%), Positives = 265/385 (68%), Gaps = 30/385 (7%)
 Frame = -3

Query: 1067 DDLSDVP-----STSQPPSLDAETE--PRRSKRVRTEKGFGPDFV--------------- 954
            D  S VP     S  + PS   E    PR+S+R R EK  G D +               
Sbjct: 726  DSNSQVPTSVGESQEETPSKVVEQPIVPRKSQRARKEKVLGSDEIDSQRISFYLVEGNRE 785

Query: 953  --------TLTVKSEPQTYKEAMTSPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTI 798
                     L ++ +P+TYKEAM S +  FW+EA N+E DSI  N+TWELVDLPPGSK I
Sbjct: 786  DIIRKIPIVLQIEEDPKTYKEAMASRDVAFWKEAINDEMDSIMSNQTWELVDLPPGSKPI 845

Query: 797  GCKWVFKR*LRTDGTIEKHKARLVAKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYD 618
            GCKWVF+R   TDG I+  KARLVAKG++Q+EG+D+FDTY+PV   TSIR+L A+ASI++
Sbjct: 846  GCKWVFRRKYHTDGMIQTFKARLVAKGFKQREGIDYFDTYAPVARTTSIRILFALASIHN 905

Query: 617  LHIHQMDVKTAFLYGELNEEIYMDQPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFN 438
            L +HQMDVKTAFL G+LNEE+YM+QPEGFV+ G E+KVCKL KSLYGLKQAPKQWHEKF+
Sbjct: 906  LFVHQMDVKTAFLNGDLNEEVYMEQPEGFVLLGNENKVCKLVKSLYGLKQAPKQWHEKFD 965

Query: 437  HVMISNGFKVNESDKCVYIKSVDDSHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMK 258
            H ++S+GF+ N  DKC+Y K+ DD  VIVCLYVDDMLIL  ++  I  TK  L+  F MK
Sbjct: 966  HAILSDGFRHNNVDKCLYSKTCDDYMVIVCLYVDDMLILSDDMXGIIETKRFLSXTFKMK 1025

Query: 257  DLGPADVILGMKIRKMFDGYSLSQSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEG 78
            DL   D ILG+K+++   GY+L+Q+HY+E V+ +F+H   K A TP+D + KL+ N G  
Sbjct: 1026 DLXEVDTILGIKVKRNSGGYALNQTHYIEKVVSKFSHLKIKDANTPFDSSIKLEKNBGRS 1085

Query: 77   IYQLEYSRVIGSLMYLMNCTRPDIA 3
            + QLEY+  IGSLMY   CTR DI+
Sbjct: 1086 VAQLEYASAIGSLMYAAQCTRADIS 1110



 Score =  144 bits (363), Expect(3) = e-173
 Identities = 80/164 (48%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
 Frame = -2

Query: 1851 VSSEMLSPPITK*ETMRNCLWETLLPLKW*EKARLK*TPTRGGKKWYITFIDDHSRYCQV 1672
            V S+M+  P    E   N     LL L   +   L    TRGG ++++TFIDD SR+  V
Sbjct: 478  VKSKMIKKPFHSVERSSN-----LLDLXHSDLCELNGMLTRGGNRYFLTFIDDCSRFTYV 532

Query: 1671 YLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEYV-IPIGEFCKLNGIIHETTAP 1495
            +LL++K +  +AFK+YK EVENQ    IK LRSDRG EY       FC+  GIIHE TAP
Sbjct: 533  FLLKNKSETFNAFKVYKAEVENQLXKNIKVLRSDRGXEYFSSEFNSFCEEYGIIHECTAP 592

Query: 1494 SSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAILYACYI 1363
             +P+ NG+AERKNRT ++MVN ML  + L  NLW EA+L AC+I
Sbjct: 593  YTPQHNGIAERKNRTFLEMVNXMLLHAKLNFNLWGEALLTACHI 636



 Score =  103 bits (256), Expect(3) = e-173
 Identities = 43/87 (49%), Positives = 61/87 (70%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LNR+P KK + +PYELWKGR+P+  YFKVWGCLA        KTK+GP+ + C F+G   
Sbjct: 637  LNRIPMKKKEISPYELWKGRKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFVGCAS 696

Query: 1183 HTSAYRFMVIGENTIMESRDTVFFEHI 1103
            +++AYR + +  N I+ESR+  FFE++
Sbjct: 697  NSNAYRLLDLESNVIIESREVEFFENL 723


>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1479

 Score =  402 bits (1034), Expect(3) = e-173
 Identities = 201/362 (55%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 916  PHEHFAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 975

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K IGCKWVFK+ LR DGTIEK+KARLV
Sbjct: 976  SPDADYWKEAVCSEMDSIMSNGTWEVVERPYGCKPIGCKWVFKKKLRPDGTIEKYKARLV 1035

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 1036 AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 1095

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 1096 QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 1155

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 1156 EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 1215

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1216 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1275

Query: 8    IA 3
            I+
Sbjct: 1276 IS 1277



 Score =  152 bits (383), Expect(3) = e-173
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 681  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEY 740

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 741  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 800

Query: 1377 YACYI 1363
             AC++
Sbjct: 801  TACHV 805



 Score =  106 bits (264), Expect(3) = e-173
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 806  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 865

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI+ESRD  FFE+ FP
Sbjct: 866  HSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFP 901



 Score = 64.3 bits (155), Expect = 4e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKAN-VVDDSGYFTGMVSEVNLVSNVTNVRDWWLDS 1871
            CGK+GH AKDC               AN ++ + G  +G    +  V +V +  DWW+D+
Sbjct: 428  CGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDT 480

Query: 1870 GATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            GA  HVC   + FSSY +VG    L MGN S + V G G V++
Sbjct: 481  GANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDL 522


>gb|AAG13538.1|AC023240_11 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1408

 Score =  402 bits (1034), Expect(3) = e-173
 Identities = 201/362 (55%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 845  PHEHFAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 904

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K IGCKWVFK+ LR DGTIEK+KARLV
Sbjct: 905  SPDADYWKEAVCSEMDSIMSNGTWEVVERPYGCKPIGCKWVFKKKLRPDGTIEKYKARLV 964

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 965  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 1024

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 1025 QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 1084

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 1085 EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 1144

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1145 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1204

Query: 8    IA 3
            I+
Sbjct: 1205 IS 1206



 Score =  152 bits (383), Expect(3) = e-173
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 610  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEY 669

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 670  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 729

Query: 1377 YACYI 1363
             AC++
Sbjct: 730  TACHV 734



 Score =  106 bits (264), Expect(3) = e-173
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 735  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 794

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI+ESRD  FFE+ FP
Sbjct: 795  HSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFP 830



 Score = 64.3 bits (155), Expect = 4e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKAN-VVDDSGYFTGMVSEVNLVSNVTNVRDWWLDS 1871
            CGK+GH AKDC               AN ++ + G  +G    +  V +V +  DWW+D+
Sbjct: 357  CGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDT 409

Query: 1870 GATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            GA  HVC   + FSSY +VG    L MGN S + V G G V++
Sbjct: 410  GANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDL 451


>gb|AAV43959.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1268

 Score =  403 bits (1036), Expect(3) = e-173
 Identities = 200/362 (55%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 705  PHEHFAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 764

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 765  SPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 824

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 825  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 884

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 885  QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 944

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 945  EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 1004

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1005 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1064

Query: 8    IA 3
            I+
Sbjct: 1065 IS 1066



 Score =  151 bits (381), Expect(3) = e-173
 Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK++ T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 470  TKGGKKYFTTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEY 529

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 530  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 589

Query: 1377 YACYI 1363
             AC++
Sbjct: 590  TACHV 594



 Score =  106 bits (264), Expect(3) = e-173
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 595  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 654

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI+ESRD  FFE+ FP
Sbjct: 655  HSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFP 690



 Score = 64.3 bits (155), Expect = 4e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKAN-VVDDSGYFTGMVSEVNLVSNVTNVRDWWLDS 1871
            CGK+GH AKDC               AN ++ + G  +G    +  V +V +  DWW+D+
Sbjct: 217  CGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDT 269

Query: 1870 GATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            GA  HVC   + FSSY +VG    L MGN S + V G G V++
Sbjct: 270  GANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDL 311


>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1413

 Score =  403 bits (1036), Expect(3) = e-173
 Identities = 200/362 (55%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 850  PHEHFTPIEHNDQTPEENPEEDNIVDTRKSKRQRVVKSFGDDYIVYLVDDTPRTIEEAYS 909

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 910  SPDADYWKEAVRSEMDSIMSNGTWEIVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 969

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 970  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 1029

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 1030 QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 1089

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 1090 EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 1149

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1150 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1209

Query: 8    IA 3
            I+
Sbjct: 1210 IS 1211



 Score =  150 bits (379), Expect(3) = e-173
 Identities = 75/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 615  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEY 674

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W E +L
Sbjct: 675  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGETVL 734

Query: 1377 YACYI 1363
             AC++
Sbjct: 735  TACHV 739



 Score =  106 bits (264), Expect(3) = e-173
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 740  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 799

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI+ESRD  FFE+ FP
Sbjct: 800  HSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFP 835



 Score = 63.9 bits (154), Expect = 5e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKAN-VVDDSGYFTGMVSEVNLVSNVTNVRDWWLDS 1871
            CGK+GH AKDC               AN ++ + G  +G    +  V +V +  DWW+D+
Sbjct: 362  CGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYGKILPRVLSVFHSPDWWVDT 414

Query: 1870 GATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            GA  HVC   + FSSY +VG    L MGN S + V G G V++
Sbjct: 415  GANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDL 456


>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1394

 Score =  403 bits (1036), Expect(3) = e-173
 Identities = 200/362 (55%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 831  PHEHFTPIEHNDQTPEENPEEDNIVDTRKSKRQRVVKSFGDDYIVYLVDDTPRTIEEAYS 890

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 891  SPDADYWKEAVRSEMDSIMSNGTWEIVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 950

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 951  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 1010

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 1011 QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 1070

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 1071 EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 1130

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1131 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1190

Query: 8    IA 3
            I+
Sbjct: 1191 IS 1192



 Score =  150 bits (379), Expect(3) = e-173
 Identities = 75/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 596  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEY 655

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W E +L
Sbjct: 656  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGETVL 715

Query: 1377 YACYI 1363
             AC++
Sbjct: 716  TACHV 720



 Score =  106 bits (264), Expect(3) = e-173
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 721  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 780

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI+ESRD  FFE+ FP
Sbjct: 781  HSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFP 816



 Score = 63.9 bits (154), Expect = 5e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKAN-VVDDSGYFTGMVSEVNLVSNVTNVRDWWLDS 1871
            CGK+GH AKDC               AN ++ + G  +G    +  V +V +  DWW+D+
Sbjct: 343  CGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYGKILPRVLSVFHSPDWWVDT 395

Query: 1870 GATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            GA  HVC   + FSSY +VG    L MGN S + V G G V++
Sbjct: 396  GANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDL 437


>gb|ABF94664.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1286

 Score =  406 bits (1043), Expect(3) = e-172
 Identities = 201/362 (55%), Positives = 263/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 723  PHEHFAPIEHNDETPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 782

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 783  SPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 842

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 843  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 902

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E+ VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 903  QPDGYVLEGQEEMVCKLLKSLYGLKQAPKQWHEKFDITLTSAGFVVNEADKCVYYRYGGG 962

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L++NF+MKDLG ADVIL +K+++  + G +L 
Sbjct: 963  EGVILCLYVDDILIFGTSLNVIEEVKDYLSKNFEMKDLGEADVILNIKLQRGDEGGITLV 1022

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1023 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1082

Query: 8    IA 3
            I+
Sbjct: 1083 IS 1084



 Score =  152 bits (383), Expect(3) = e-172
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 488  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEY 547

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 548  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 607

Query: 1377 YACYI 1363
             AC++
Sbjct: 608  TACHV 612



 Score =  101 bits (252), Expect(3) = e-172
 Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 7/95 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P  KK K+GPKTVDCVFLGY  
Sbjct: 613  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIVKKRKLGPKTVDCVFLGYAI 672

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIF 1100
            H+  YRF+++          TI ESRD  FFE+ F
Sbjct: 673  HSVGYRFLIVNSGVPDMHAGTIFESRDATFFENEF 707


>gb|AAP50927.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708705|gb|ABF96500.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1240

 Score =  403 bits (1036), Expect(3) = e-172
 Identities = 200/362 (55%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 705  PHEHFAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 764

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 765  SPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 824

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 825  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 884

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 885  QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 944

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 945  KGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 1004

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1005 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1064

Query: 8    IA 3
            I+
Sbjct: 1065 IS 1066



 Score =  152 bits (383), Expect(3) = e-172
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 470  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEY 529

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 530  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 589

Query: 1377 YACYI 1363
             AC++
Sbjct: 590  TACHV 594



 Score =  104 bits (259), Expect(3) = e-172
 Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P  KK K+GPKTVDCVFLGY  
Sbjct: 595  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIVKKRKLGPKTVDCVFLGYAI 654

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI ESRD  FFE+ FP
Sbjct: 655  HSVVYRFLIVNSGVPDMHAGTIFESRDATFFENEFP 690



 Score = 64.3 bits (155), Expect = 4e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKAN-VVDDSGYFTGMVSEVNLVSNVTNVRDWWLDS 1871
            CGK+GH AKDC               AN ++ + G  +G    +  V +V +  DWW+D+
Sbjct: 217  CGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDT 269

Query: 1870 GATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            GA  HVC   + FSSY +VG    L MGN S + V G G V++
Sbjct: 270  GANIHVCADISQFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDL 311


>dbj|BAB03249.1| polyprotein [Oryza sativa]
          Length = 1268

 Score =  401 bits (1030), Expect(3) = e-172
 Identities = 199/362 (54%), Positives = 262/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 705  PHEYFAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 764

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 765  SPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 824

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 825  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 884

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWH+KF+  + S GF VNE+DKCVY +    
Sbjct: 885  QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHKKFDTTLTSAGFVVNEADKCVYYRYGGG 944

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 945  EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 1004

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 1005 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 1064

Query: 8    IA 3
            I+
Sbjct: 1065 IS 1066



 Score =  152 bits (383), Expect(3) = e-172
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 470  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHFFKIYKAEVENQLERKIKRLRSDRGGEY 529

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 530  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 589

Query: 1377 YACYI 1363
             AC++
Sbjct: 590  TACHV 594



 Score =  106 bits (264), Expect(3) = e-172
 Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 595  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 654

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI+ESRD  FFE+ FP
Sbjct: 655  HSVGYRFLIVNSGVPDMHVGTILESRDATFFENEFP 690



 Score = 64.3 bits (155), Expect = 4e-07
 Identities = 39/103 (37%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
 Frame = -1

Query: 2047 CGKTGHMAKDCRAXXXXXXXXXXXXKAN-VVDDSGYFTGMVSEVNLVSNVTNVRDWWLDS 1871
            CGK+GH AKDC               AN ++ + G  +G    +  V +V +  DWW+D+
Sbjct: 217  CGKSGHWAKDC-------PERKDRKSANMIISEGGGTSGYGKILPTVLSVFHSPDWWVDT 269

Query: 1870 GATRHVCKFRNAFSSYNKVGDDEKLFMGNSSTSKVVGKGKVEM 1742
            GA  HVC   + FSSY +VG    L MGN S + V G G V++
Sbjct: 270  GANIHVCADISLFSSY-QVGRGSSLLMGNGSLAAVHGVGTVDL 311


>gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  404 bits (1038), Expect(3) = e-172
 Identities = 201/362 (55%), Positives = 261/362 (72%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + RRSKR R  K FG D++   V   P+T +EA +
Sbjct: 465  PHEHFAPIEHNDQTPEENPEEDNIVDTRRSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 524

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 525  SPDADYWKEAVRSEMDSIMSNGTWEFVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 584

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG DFFDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 585  AKGYTQKEGEDFFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 644

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 645  QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 704

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKIRKMFD-GYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+++  + G +L 
Sbjct: 705  EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEGGITLV 764

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+     QL YS++IGSLMYL + TRPD
Sbjct: 765  QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIARDQLRYSQIIGSLMYLASATRPD 824

Query: 8    IA 3
            I+
Sbjct: 825  IS 826



 Score =  150 bits (380), Expect(3) = e-172
 Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK++IT IDD +R+C VYLL++KD+AL   K+YK EVENQ    IK LRSDRGGEY
Sbjct: 233  TKGGKKYFITLIDDCTRFCYVYLLKTKDEALHYIKIYKAEVENQLERKIKRLRSDRGGEY 292

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 293  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 352

Query: 1377 YACYI 1363
             AC++
Sbjct: 353  TACHV 357



 Score =  103 bits (258), Expect(3) = e-172
 Identities = 45/92 (48%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P +KK K+GPKTVDCVFLGY  
Sbjct: 358  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIAKKRKLGPKTVDCVFLGYAI 417

Query: 1183 HTSAYRFMVIGEN----TIMESRDTVFFEHIF 1100
            H+  YRF+++  +    TI+E+RD  FFE+ F
Sbjct: 418  HSVGYRFLIVNSDMHAGTILETRDATFFENEF 449


>gb|AAL31653.1|AC079179_8 Putative polyprotein from transposon TNT [Oryza sativa]
            gi|31429907|gb|AAP51896.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1342

 Score =  402 bits (1033), Expect(3) = e-172
 Identities = 201/362 (55%), Positives = 260/362 (71%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1085 PHKRVRDDLSDVPSTSQPPSLDAETEPRRSKRVRTEKGFGPDFVTLTVKSEPQTYKEAMT 906
            PH+       +  +  + P  D   + R+SKR R  K FG D++   V   P+T +EA +
Sbjct: 779  PHEHFAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYIVYLVDDTPRTIEEAYS 838

Query: 905  SPEAPFWEEASNNEWDSIQQNETWELVDLPPGSKTIGCKWVFKR*LRTDGTIEKHKARLV 726
            SP+A +W+EA  +E DSI  N TWE+V+ P G K +GCKWVFK+ LR DGTIEK+KARLV
Sbjct: 839  SPDADYWKEAVRSEMDSIMSNGTWEVVERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLV 898

Query: 725  AKGYRQQEGLDFFDTYSPVTIITSIRMLIAIASIYDLHIHQMDVKTAFLYGELNEEIYMD 546
            AKGY Q+EG D FDTYSPV  +T+IR+L+A+A+ + L +HQMDVKTAFL GEL EEIYMD
Sbjct: 899  AKGYTQKEGEDLFDTYSPVARLTTIRVLLALAASHGLLVHQMDVKTAFLNGELEEEIYMD 958

Query: 545  QPEGFVVKGYEDKVCKLKKSLYGLKQAPKQWHEKFNHVMISNGFKVNESDKCVYIKSVDD 366
            QP+G+V++G E  VCKL KSLYGLKQAPKQWHEKF+  + S GF VNE+DKCVY +    
Sbjct: 959  QPDGYVLEGQEGMVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRYGGG 1018

Query: 365  SHVIVCLYVDDMLILGSNLDSINTTKSMLNENFDMKDLGPADVILGMKI-RKMFDGYSLS 189
              VI+CLYVDD+LI G++L+ I   K  L+++F+MKDLG ADVIL +K+ R   DG +L 
Sbjct: 1019 EGVILCLYVDDILIFGTSLNVIEEVKDYLSKSFEMKDLGEADVILNIKLQRGDEDGITLV 1078

Query: 188  QSHYVETVLKRFNHENAKPATTPYDPNCKLKNNKGEGIYQLEYSRVIGSLMYLMNCTRPD 9
            QSHYV+ VL RF + + KPA TPYDP+  L+ N+  G  QL YS++IGSLMYL + TRP 
Sbjct: 1079 QSHYVDKVLSRFGYSDCKPAPTPYDPSVLLRKNRRIGRDQLRYSQIIGSLMYLASATRPG 1138

Query: 8    IA 3
            I+
Sbjct: 1139 IS 1140



 Score =  152 bits (383), Expect(3) = e-172
 Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 1/125 (0%)
 Frame = -2

Query: 1734 TRGGKKWYITFIDDHSRYCQVYLLRSKDKALDAFKLYKLEVENQRGVTIKTLRSDRGGEY 1555
            T+GGKK+++T IDD +R+C VYLL++KD+AL  FK+YK EVENQ    IK LRSDRGGEY
Sbjct: 544  TKGGKKYFMTLIDDCTRFCYVYLLKTKDEALHYFKIYKAEVENQLERKIKRLRSDRGGEY 603

Query: 1554 VI-PIGEFCKLNGIIHETTAPSSPESNGVAERKNRTLIDMVNAMLASSGLPSNLWVEAIL 1378
                   FC+  GIIHE T P SP+SNGVAERKNRTL +MVNAML ++GL    W EA+L
Sbjct: 604  FSNEFASFCEEFGIIHEMTPPYSPQSNGVAERKNRTLTEMVNAMLDTAGLSKEWWGEAVL 663

Query: 1377 YACYI 1363
             AC++
Sbjct: 664  TACHV 668



 Score =  104 bits (259), Expect(3) = e-172
 Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
 Frame = -1

Query: 1363 LNRVPFKKSDKTPYELWKGRQPSYAYFKVWGCLAKVATPRSKKTKIGPKTVDCVFLGYPE 1184
            LN++P K  + TP+E W+ ++ + +Y + WGCLAKV  P  KK K+GPKTVDCVFLGY  
Sbjct: 669  LNKIPMKHKEVTPFEEWERKKLNLSYLRTWGCLAKVNVPIVKKRKLGPKTVDCVFLGYAI 728

Query: 1183 HTSAYRFMVIGE-------NTIMESRDTVFFEHIFP 1097
            H+  YRF+++          TI ESRD  FFE+ FP
Sbjct: 729  HSVGYRFLIVNSGVPDMHAGTIFESRDATFFENEFP 764