BLASTX nr result
ID: Papaver30_contig00008892
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver30_contig00008892
(3720 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 130 e-107
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 133 e-106
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 130 e-104
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 129 e-104
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 129 e-103
gb|ABA95357.2| retrotransposon protein, putative, unclassified [... 118 1e-96
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 124 6e-96
ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isof... 122 7e-96
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 116 7e-96
emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group] g... 123 8e-95
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 118 8e-95
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 118 8e-95
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 117 5e-93
gb|ABA99961.1| retrotransposon protein, putative, unclassified [... 117 6e-91
gb|AAG13430.1|AC051634_11 putative plant disease resistance poly... 110 3e-89
gb|AAP54661.2| retrotransposon protein, putative, unclassified [... 110 3e-89
ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648... 132 5e-89
gb|ABF94845.1| retrotransposon protein, putative, unclassified [... 110 9e-88
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays] 124 2e-86
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja... 105 7e-86
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 130 bits (326), Expect(6) = e-107
Identities = 60/137 (43%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
+Q++F++ L ST +HPQTDGQ ERVN CLE+YLRC+ +P W W ALAEWWYN
Sbjct: 683 FQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYN 742
Query: 1184 SSFHISLKMSPFQALYGYVPPHL-DFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQE 1360
+++H +++M+PF+ALYGY PP + +F + S A T AQ
Sbjct: 743 TTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVT-LEEKETIVQKLKASMEDAQR 801
Query: 1361 RMKLYADKSRKDRSFEI 1411
RMK YAD++R +R E+
Sbjct: 802 RMKYYADRNRTERKLEV 818
Score = 126 bits (316), Expect(6) = e-107
Identities = 64/133 (48%), Positives = 84/133 (63%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D+VYLKL PYR+ +R + KL K+ GP V++KVG VAY+LQLP IH VFHVSQ
Sbjct: 820 DMVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVFHVSQ 879
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LKKH G P P+LP V +GQI P +LQ R I + V Q L+ W+N +P AT
Sbjct: 880 LKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEAT 939
Query: 1768 WDDHQSSLPEIYP 1806
W+D S + +++P
Sbjct: 940 WED-ASYIQKVFP 951
Score = 94.0 bits (232), Expect(6) = e-107
Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +3
Query: 708 ICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLTKYAHFL 884
+CQ KS+ + N L + D + HI+MDF+EGLP S K VILV+ DRLTKYAHF+
Sbjct: 582 VCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVDRLTKYAHFI 641
Query: 885 SLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
+L HPYT KLHG+ +IV+DRD+VFT
Sbjct: 642 ALSHPYTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFT 679
Score = 63.5 bits (153), Expect(6) = e-107
Identities = 28/65 (43%), Positives = 40/65 (61%)
Frame = +3
Query: 135 STYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCTM 314
S YE+E + ++ A+ RWR Y+ G + IKTD QSLKY + Q+L Q K L+KL++
Sbjct: 383 SIYEKEAMAILEALKRWRHYVLGGELVIKTDQQSLKYMMNQRLVEGIQHKLLLKLMEYNY 442
Query: 315 TFSIK 329
T K
Sbjct: 443 TIEYK 447
Score = 58.5 bits (140), Expect(6) = e-107
Identities = 23/87 (26%), Positives = 46/87 (52%)
Frame = +1
Query: 388 LSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNV 567
+++ P W ++ Y D QA ++ + ++ G+++YK ++Y+G G +
Sbjct: 475 IAVVVPEWILDIKRSYEEDVQAHKLLSLIGTAGDPEGEYKFEAGIMKYKGRIYVGETGEI 534
Query: 568 IQTLLEYLHALTIGGHFGIQATFVRAR 648
L++ H+ T GGH GI+AT+ R +
Sbjct: 535 RGQLIQAYHSSTFGGHCGIRATYQRIK 561
Score = 32.3 bits (72), Expect(6) = e-107
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 311 YDIQYKKGVDNVVADALSRRP 373
Y I+YK G +N+VADALSR P
Sbjct: 442 YTIEYKAGRENLVADALSRSP 462
Score = 70.9 bits (172), Expect = 9e-09
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +3
Query: 3 ELDIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTYEEEFLVVIMAIHR 182
E DI KT FKTH+GHYE++VM FGLT+APATFQ+LMN PFL + F I+ +
Sbjct: 153 EEDIPKTAFKTHMGHYEYQVMPFGLTNAPATFQSLMNQALAPFLRKFVLVFFYDILIYSK 212
Query: 183 WRQ 191
R+
Sbjct: 213 TRE 215
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 133 bits (335), Expect(6) = e-106
Identities = 60/136 (44%), Positives = 80/136 (58%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
WQ+LF+++ L ST +HPQTDGQ ERVN C+E+YLRC+ +P KW W LAEWWYN
Sbjct: 1064 WQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYN 1123
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
++FH +LK+SPFQALYG+ PP ++ D + AQ R
Sbjct: 1124 TTFHTALKLSPFQALYGFPPPLINEVAIPGPEDNEARDFLEEKQVMLRRLKENLAQAQTR 1183
Query: 1364 MKLYADKSRKDRSFEI 1411
MK YAD +R +R +
Sbjct: 1184 MKKYADLNRSERQLTV 1199
Score = 130 bits (326), Expect(6) = e-106
Identities = 64/135 (47%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D+VYLK+ PYR L++ KL++ F GP V+Q+VG VAY+LQLP V IH VFH+SQ
Sbjct: 1201 DMVYLKMQPYRTTAFGLKQALKLTSIFYGPFRVMQRVGKVAYRLQLPEGVGIHPVFHISQ 1260
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LK+H G PSP+LP+V +G+I P + +TR + + LV Q L+QW N PE+A+
Sbjct: 1261 LKQHCGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWANLPPEDAS 1320
Query: 1768 WDDH---QSSLPEIY 1803
W+D +S+ PE Y
Sbjct: 1321 WEDASFIKSTFPEFY 1335
Score = 84.7 bits (208), Expect(6) = e-106
Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +3
Query: 708 ICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLTKYAHFL 884
+CQR+K++ + L + D + HI+MDFIEGLP S K VI V+ DR TKYAH +
Sbjct: 963 VCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSV 1022
Query: 885 SLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
L HPY+ KLHG +IVSDRD++FT
Sbjct: 1023 PLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFT 1060
Score = 61.2 bits (147), Expect(6) = e-106
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCT 311
+STY+ E L +I ++ RWR Y G + I+TD QSLK+ QK+ Q K +++LL+
Sbjct: 770 MSTYDREALAIIESLKRWRHYFLGTQLIIRTDQQSLKFMTDQKVAEGIQHKLMLRLLEFD 829
Query: 312 MTFSIKK 332
T KK
Sbjct: 830 YTIEYKK 836
Score = 56.6 bits (135), Expect(6) = e-106
Identities = 26/87 (29%), Positives = 43/87 (49%)
Frame = +1
Query: 388 LSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNV 567
+S+ P W VT+ Y ND+ + ++ +T GVLRYK ++Y+G +
Sbjct: 856 ISIAVPSWIEAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPEL 915
Query: 568 IQTLLEYLHALTIGGHFGIQATFVRAR 648
++ LH +GGH G AT+ R +
Sbjct: 916 RLNIIHSLHMSAVGGHSGRVATYQRVK 942
Score = 33.5 bits (75), Expect(6) = e-106
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 311 YDIQYKKGVDNVVADALSRR 370
Y I+YKKG +N VADALSRR
Sbjct: 830 YTIEYKKGKENKVADALSRR 849
Score = 63.9 bits (154), Expect = 1e-06
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +3
Query: 9 DIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTY 143
DI KT F T+LGHYE+ VM FGLT+APATFQ LMN IF +L +
Sbjct: 543 DICKTAFNTYLGHYEYLVMPFGLTNAPATFQCLMNSIFAQYLRRF 587
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 130 bits (326), Expect(6) = e-104
Identities = 63/137 (45%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
+Q++F+ L ST HPQTDGQ ERVN CLE+YLR + +P KW W ALAEWWYN
Sbjct: 1339 FQEIFKTQKVKLRFSTAHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYN 1398
Query: 1184 SSFHISLKMSPFQALYGYVPPHL-DFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQE 1360
+++H S++M+PFQALYGY PP + +F I S+ A T AQ
Sbjct: 1399 TTYHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVT-LEDKALILQKLKSSIGEAQR 1457
Query: 1361 RMKLYADKSRKDRSFEI 1411
R+K YADK R +R+ E+
Sbjct: 1458 RIKFYADKGRSERTLEL 1474
Score = 126 bits (317), Expect(6) = e-104
Identities = 66/139 (47%), Positives = 86/139 (61%), Gaps = 3/139 (2%)
Frame = +1
Query: 1399 KL*DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFH 1578
+L D+VYLKL PYR+ + +R + KL +K+ GP VI+K+G VAYKLQLP IH VFH
Sbjct: 1473 ELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFH 1532
Query: 1579 VSQLKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPE 1758
VSQLKKH G P P+LP + +GQI P +LQ R I + V Q L+ W N +P
Sbjct: 1533 VSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPA 1592
Query: 1759 NATWDDH---QSSLPEIYP 1806
ATW+D Q++ P P
Sbjct: 1593 EATWEDASYIQAAFPNFQP 1611
Score = 94.0 bits (232), Expect(6) = e-104
Identities = 53/107 (49%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Frame = +3
Query: 693 VSHY----DICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFD 857
V HY CQ K++ + N L + D + HITMDFIEGLP S K VILV+ D
Sbjct: 1229 VEHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVD 1288
Query: 858 RLTKYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
RLTKYAHFL+L HPYT KLHG+ IV+DRD+VFT
Sbjct: 1289 RLTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFT 1335
Score = 58.5 bits (140), Expect(6) = e-104
Identities = 24/57 (42%), Positives = 37/57 (64%)
Frame = +3
Query: 135 STYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLD 305
S YE+E + ++ A+ +WR Y+ G IKTD QSLK+ + Q+L Q K L+KL++
Sbjct: 1042 SVYEKEAIAILEALKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLKLME 1098
Score = 53.1 bits (126), Expect(6) = e-104
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = +1
Query: 388 LSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNV 567
+++ P W ++ Y D A I+ + + G+L+YK ++Y+G +
Sbjct: 1131 ITVVVPEWVQDIKRSYEEDIFAHKILSLIETDGDPERHYKLESGLLKYKGRIYVGETTEI 1190
Query: 568 IQTLLEYLHALTIGGHFGIQATFVRAR 648
LLE HA GGH GI+AT+ R +
Sbjct: 1191 RMLLLEAYHASYFGGHSGIRATYHRIK 1217
Score = 32.3 bits (72), Expect(6) = e-104
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 311 YDIQYKKGVDNVVADALSRRP 373
Y I+YK G +N+VADALSR P
Sbjct: 1101 YVIEYKSGKENLVADALSRSP 1121
Score = 71.2 bits (173), Expect = 7e-09
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +3
Query: 3 ELDIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTYEEEFLVVIM 170
E DI KT F+THLGHYE+ VM FGLT+APATFQALMN + PFL + F I+
Sbjct: 812 EGDIPKTAFRTHLGHYEYNVMPFGLTNAPATFQALMNQVLAPFLRKFVLVFFADIL 867
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 129 bits (323), Expect(6) = e-104
Identities = 59/137 (43%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
+Q++F+++ L ST++HPQTDGQ ERVN CLE+YLR + +P +W W ALAEWWYN
Sbjct: 1314 FQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWYN 1373
Query: 1184 SSFHISLKMSPFQALYGYVPPHL-DFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQE 1360
+++H S++M+PFQALYGY PP + +F + S+ A T AQ
Sbjct: 1374 TTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVT-IEQKDAIIQKLKYSLTEAQR 1432
Query: 1361 RMKLYADKSRKDRSFEI 1411
R+K YAD++R +R+ +
Sbjct: 1433 RIKHYADRNRSERTLAV 1449
Score = 124 bits (311), Expect(6) = e-104
Identities = 67/136 (49%), Positives = 82/136 (60%), Gaps = 3/136 (2%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D+VYLKL PYR+ +R + KL +KF GP +++KVG VAYKLQLP IH VFHVSQ
Sbjct: 1451 DMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQ 1510
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LKKH G P +LP V +GQI P +L+ R I +G V Q L+ W N SP AT
Sbjct: 1511 LKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEAT 1570
Query: 1768 WDDH---QSSLPEIYP 1806
W+D QS P P
Sbjct: 1571 WEDASMIQSMFPSFNP 1586
Score = 94.0 bits (232), Expect(6) = e-104
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
F+ ICQ K++ + + L + D + HITMDF+EGLP SN K VILV+ DRLT
Sbjct: 1207 FIRECPICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVILVVVDRLT 1266
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYAHF+++ HPYT +LHG+ +I++DRD++FT
Sbjct: 1267 KYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFT 1310
Score = 59.3 bits (142), Expect(6) = e-104
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +3
Query: 135 STYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCTM 314
S YE+E + ++ A+ +WR Y+ G++ IKTD QSLK+ + Q+L Q K L+KL++
Sbjct: 1019 SIYEKEAMAILEALKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDY 1078
Query: 315 TFSIK 329
+ K
Sbjct: 1079 SIEYK 1083
Score = 54.7 bits (130), Expect(6) = e-104
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +1
Query: 403 PHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNVIQTLL 582
P W ++ Y D QA I+ ++ + G+LRYK ++Y+G + + L+
Sbjct: 1111 PEWVRDIQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEIREELI 1170
Query: 583 EYLHALTIGGHFGIQATFVRARS 651
H+ GGH G++AT+ R +S
Sbjct: 1171 RSYHSSAFGGHSGMRATYHRIKS 1193
Score = 32.3 bits (72), Expect(6) = e-104
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2
Query: 311 YDIQYKKGVDNVVADALSRRP 373
Y I+YK G +N+VADALSR P
Sbjct: 1078 YSIEYKAGKENLVADALSRIP 1098
Score = 70.1 bits (170), Expect = 1e-08
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 11/82 (13%)
Frame = +3
Query: 9 DIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTYEEEFLVVIMAIHR-W 185
DI KT F+THLGHYE++VM FGLT+AP TFQ+LMN + PFL Y F I+ + W
Sbjct: 791 DIPKTAFRTHLGHYEYQVMPFGLTNAPTTFQSLMNQVLAPFLRKYVLVFFDDILIYSKDW 850
Query: 186 RQY----------LQGNKFTIK 221
++ L+ NK +K
Sbjct: 851 AEHKEHIRQVMKVLEENKLVVK 872
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 129 bits (323), Expect(6) = e-103
Identities = 60/137 (43%), Positives = 86/137 (62%), Gaps = 1/137 (0%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
+Q++F+A+ L ST +HPQ DGQ ERVN CLE+YLR + +P KW W ALAEWWYN
Sbjct: 1203 FQEIFKAMKVKLRFSTAYHPQMDGQTERVNQCLESYLRNMTFQEPHKWYSWLALAEWWYN 1262
Query: 1184 SSFHISLKMSPFQALYGYVPPHL-DFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQE 1360
++FH +++M+PF+A+YGY PP + +F + S+ A T AQ
Sbjct: 1263 TTFHTAIQMTPFKAMYGYSPPQINEFSVPCNISEEARVT-IEEKEAILNKLKNSLADAQH 1321
Query: 1361 RMKLYADKSRKDRSFEI 1411
RMK +ADK+R +R+ E+
Sbjct: 1322 RMKYFADKNRTERNLEV 1338
Score = 123 bits (308), Expect(6) = e-103
Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 3/136 (2%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D+VYLKL PYR++ +R + KL +KF GP V+QK+G +AYKLQLP +IH VFHVSQ
Sbjct: 1340 DMVYLKLKPYRQSAFGIRGSLKLRSKFYGPFKVLQKIGQLAYKLQLPDDAQIHPVFHVSQ 1399
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LKKH G P +LP V +GQI P +LQ R + + V Q L+ W N SP AT
Sbjct: 1400 LKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEAT 1459
Query: 1768 WDDH---QSSLPEIYP 1806
W+D Q+ P P
Sbjct: 1460 WEDASVIQAMFPSFNP 1475
Score = 92.4 bits (228), Expect(6) = e-103
Identities = 48/104 (46%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
F+ CQ KS+ + N L + D + HITMDFIEGLP S K VILV+ DRLT
Sbjct: 1096 FIRECPTCQITKSEHVHIPGLLNPLEIPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLT 1155
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYAHF++L HPY KLHG+ I++DRD++FT
Sbjct: 1156 KYAHFIALAHPYDVEQVVEAFMNNIHKLHGMPMVIITDRDRIFT 1199
Score = 61.2 bits (147), Expect(6) = e-103
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +3
Query: 135 STYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCTM 314
S YE+E + ++ A+ +WR Y+ G+K IKTD QSLK+ + Q+L Q K L+KL++
Sbjct: 904 SIYEKEAMAILEALKKWRHYVLGSKLIIKTDQQSLKFMMGQRLVEGIQHKLLLKLMEYDY 963
Query: 315 TFSIK 329
T K
Sbjct: 964 TIEYK 968
Score = 52.8 bits (125), Expect(6) = e-103
Identities = 23/87 (26%), Positives = 45/87 (51%)
Frame = +1
Query: 388 LSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNV 567
+++ P W ++ Y ND QA I+ + + G+L+YK ++Y+G ++
Sbjct: 995 MTVVIPEWIVDIQRSYENDVQAHKILSLIGTAADPDREYKLEAGLLKYKGRIYVGEATDI 1054
Query: 568 IQTLLEYLHALTIGGHFGIQATFVRAR 648
+ L+ H+ + GGH G++AT R +
Sbjct: 1055 RRQLITTYHSSSFGGHSGMRATHHRIK 1081
Score = 33.5 bits (75), Expect(6) = e-103
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 311 YDIQYKKGVDNVVADALSRRPLDTA---SCH 394
Y I+YK G +N+VADALSR P A CH
Sbjct: 963 YTIEYKSGKENLVADALSRLPQKEAVADRCH 993
Score = 70.1 bits (170), Expect = 1e-08
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Frame = +3
Query: 3 ELDIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTYEEEFLVVIMAIHR 182
E D+ KT F+THLGHYE++VM FGLT+ PATFQ+LMN + PFL + F I+ +
Sbjct: 674 EKDVHKTAFRTHLGHYEYQVMPFGLTNDPATFQSLMNHVLAPFLRRFVLVFFDDILIYSK 733
Query: 183 WR-----------QYLQGNKFTIK 221
R Q LQ N IK
Sbjct: 734 TRAEHLEHVKLVMQALQDNHLVIK 757
>gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 118 bits (296), Expect(5) = 1e-96
Identities = 53/136 (38%), Positives = 79/136 (58%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W++LFR GT L +S+++HPQ+DGQ ERVN C+E +LRC P +W W ALA++WYN
Sbjct: 2490 WKELFRRAGTQLRMSSSYHPQSDGQTERVNQCVEMFLRCFVHSCPSRWKHWLALAQYWYN 2549
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
+SFH +L M+PF+ L+G+ P + ++ + T+ AQ+R
Sbjct: 2550 TSFHSALGMTPFEVLFGHKPRYFGLSTSSVDAPGDLATWLSERNDMNTLIHHHLLRAQQR 2609
Query: 1364 MKLYADKSRKDRSFEI 1411
MK AD R +R F +
Sbjct: 2610 MKSQADLKRSERCFVV 2625
Score = 110 bits (276), Expect(5) = 1e-96
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 3/144 (2%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D V++KL PY + R N KLS K+ GP V+Q++G+VAY+LQLP+H IH V HVSQ
Sbjct: 2627 DWVFMKLQPYIQQSFMTRSNRKLSFKYYGPFQVLQRIGSVAYRLQLPAHSLIHPVVHVSQ 2686
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LKK P LPV++ + L +P KIL +IR+G ++++Q+L++W+ S T
Sbjct: 2687 LKKALAPSEAVQPSLPVLNPDAGHLAIPIKILDHCSIRRGSKMIKQVLIRWSGVSSSADT 2746
Query: 1768 W---DDHQSSLPEIYP*GQG*CSG 1830
W D+ Q+ P GQ G
Sbjct: 2747 WESLDEMQAKFPAAPAWGQAETQG 2770
Score = 91.3 bits (225), Expect(5) = 1e-96
Identities = 51/104 (49%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
FV H DICQR KS+ L + QS Q ITMDFIEGLP S ILVI D+ +
Sbjct: 2383 FVQHCDICQRAKSEHVKYPGLLQPLEVPSQSWQVITMDFIEGLPKSASFDCILVIVDKFS 2442
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
K+AHFL L+HP+T +HGL +IVSDRD+VFT
Sbjct: 2443 KFAHFLPLKHPFTAFGVAQLFMEHIHSIHGLPQAIVSDRDRVFT 2486
Score = 70.1 bits (170), Expect(5) = 1e-96
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCT 311
LSTYE+E L +++AI WR YLQ ++F I+TDH+SL + Q+L+T +QQK L KLL
Sbjct: 2192 LSTYEKESLAIMLAIDHWRSYLQHDEFVIRTDHRSLSFLTNQRLSTPWQQKALTKLLGLR 2251
Query: 312 MTFSIKKEL 338
KK L
Sbjct: 2252 YKICYKKGL 2260
Score = 57.8 bits (138), Expect(5) = 1e-96
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +1
Query: 388 LSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNV 567
+S+ P W E+ Y +DS+AQ ++ F + G+L +KH+++IG +
Sbjct: 2282 ISICLPDWLQELIDGYQSDSEAQKLLQALSVSGAGPSNFEVQNGILYFKHRIWIGHNKLL 2341
Query: 568 IQTLLEYLHALTIGGHFGIQATFVRAR 648
Q +L LH +GGH GI T+ R +
Sbjct: 2342 QQKILANLHTAAVGGHSGILVTYQRVK 2368
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 124 bits (311), Expect(6) = 6e-96
Identities = 60/136 (44%), Positives = 77/136 (56%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W++LF+ GT+L S+ +HPQTDGQ E VN +E YLRC +G KP W +W LAEWWYN
Sbjct: 1194 WKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAEWWYN 1253
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
++ H S K+SPF+++YGY PP L TT E AQ+R
Sbjct: 1254 TNIHASTKLSPFESVYGYPPPKLIPYTPGTTQLQEVENTLKTRDEIIRILRTNLQLAQDR 1313
Query: 1364 MKLYADKSRKDRSFEI 1411
MK +AD RSF I
Sbjct: 1314 MKKFADIKXTARSFNI 1329
Score = 105 bits (262), Expect(6) = 6e-96
Identities = 53/130 (40%), Positives = 79/130 (60%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
DLVYL+L PY++ V R+N KLS +F GP V++K+G VAY+L+LP +IH VFHVS
Sbjct: 1331 DLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSC 1390
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LK+ G H LP D +G I PE+IL R ++ V ++L++W + A+
Sbjct: 1391 LKEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRLKKKKNHAVTEVLVKWKGLGEDEAS 1450
Query: 1768 WDDHQSSLPE 1797
W ++ + + E
Sbjct: 1451 WVEYSTLVNE 1460
Score = 89.4 bits (220), Expect(6) = 6e-96
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFNLFLIDQSC-QHITMDFIEGLPVSNKKSVILVIFDRLT 866
F+ DICQ+NKS++ + I I++DFIEGLP S SVI+V+ DRL+
Sbjct: 1087 FIKECDICQQNKSENIHPAGLLQPLPIPTKVWTDISLDFIEGLPNSESYSVIMVVVDRLS 1146
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYAHF+ + HPYT KLHGL +SIV+DRD FT
Sbjct: 1147 KYAHFIPISHPYTASKIAQVFLANIFKLHGLPNSIVTDRDPTFT 1190
Score = 73.6 bits (179), Expect(6) = 6e-96
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLL 302
LSTYE+E + +++A+ +WR YL G+ F I+TD SLKY L+QK+ T QQKW+ KLL
Sbjct: 895 LSTYEKELMALVLAVKKWRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITKLL 951
Score = 45.4 bits (106), Expect(6) = 6e-96
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 409 WAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNVIQTLLEY 588
W ++ + YA D + Q II + ++G+L YK +LYI + + +L
Sbjct: 993 WLEQLRTXYAIDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASKELREQILYL 1052
Query: 589 LHALTIGGHFGIQATFVRARS 651
LH+ GGH G T RA+S
Sbjct: 1053 LHSSPQGGHSGFHKTLHRAKS 1073
Score = 28.5 bits (62), Expect(6) = 6e-96
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 317 IQYKKGVDNVVADALSRRPLD 379
++YK+G +N VADALSR+ D
Sbjct: 957 VEYKQGKENKVADALSRKMED 977
Score = 69.7 bits (169), Expect = 2e-08
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = +3
Query: 9 DIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTY 143
DI KT F+TH GHYEF V+ FGLT+AP TFQ+LMNDIFKP+L +
Sbjct: 668 DIPKTAFRTHEGHYEFLVIPFGLTNAPTTFQSLMNDIFKPYLRKF 712
>ref|XP_008652480.1| PREDICTED: transposon Tf2-1 polyprotein isoform X1 [Zea mays]
gi|670423336|ref|XP_008652482.1| PREDICTED: transposon
Tf2-1 polyprotein isoform X1 [Zea mays]
Length = 1567
Score = 122 bits (306), Expect(6) = 7e-96
Identities = 59/136 (43%), Positives = 80/136 (58%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
WQ+LF+ GT L+LS+ +HPQ+DGQ ERVN CLE +LRC + P +W++W AE WYN
Sbjct: 1268 WQELFKLSGTQLHLSSAYHPQSDGQTERVNQCLEMFLRCAVHNSPSQWAKWLDSAELWYN 1327
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
+S+H S+K SPF+ALYG P P+T + + + AQ R
Sbjct: 1328 TSYHTSIKCSPFKALYGVEPNLGCIPVTDSLNPSEAQLTLQQRQEFLEVIKTNLASAQSR 1387
Query: 1364 MKLYADKSRKDRSFEI 1411
MK YAD +R R F+I
Sbjct: 1388 MKHYADLNRSFRQFQI 1403
Score = 101 bits (252), Expect(6) = 7e-96
Identities = 58/133 (43%), Positives = 77/133 (57%), Gaps = 4/133 (3%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
DLVYLKL P+ + V+ R KLS K+ GP ++ KVG+ AYKL LP IH VFHVSQ
Sbjct: 1405 DLVYLKLQPFAQVSVAYRPCAKLSFKYFGPFKIVDKVGSAAYKLLLPESANIHPVFHVSQ 1464
Query: 1588 LKKHTGLGHTP-SPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENA 1764
LK H +TP +LP + PE+IL R +++G V QIL++W E A
Sbjct: 1465 LKTHVP-DYTPVFTELPPTAFSENVTPNPERILDRRLVKKGSAAVTQILIKWEGIPVEMA 1523
Query: 1765 TWDDH---QSSLP 1794
+W+D+ QS P
Sbjct: 1524 SWEDYTVLQSRFP 1536
Score = 92.0 bits (227), Expect(6) = 7e-96
Identities = 51/104 (49%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFNLFLIDQSC-QHITMDFIEGLPVSNKKSVILVIFDRLT 866
FV +CQ+ K + I QS Q ++MDFIEGLP SN SVILV+ DRLT
Sbjct: 1161 FVRQCHVCQQAKHEHCKYPGLLQPLPIPQSSWQDLSMDFIEGLPKSNGYSVILVVVDRLT 1220
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYAHFL+++HP+T KLHG +IVSDRDKVFT
Sbjct: 1221 KYAHFLAVKHPFTASHIAHLFFSQVVKLHGFPHTIVSDRDKVFT 1264
Score = 64.7 bits (156), Expect(6) = 7e-96
Identities = 32/82 (39%), Positives = 45/82 (54%)
Frame = +3
Query: 87 PATFQALMNDIFKPFLSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLT 266
P F + + LSTYE+EFL ++MA+ +WR YL F I+TDH+SL + Q L
Sbjct: 957 PVAFYSKALGVKNSQLSTYEKEFLAILMAVEKWRCYLSRGPFVIRTDHRSLCHLQDQTLA 1016
Query: 267 TSFQQKWLIKLLDCTMTFSIKK 332
T Q+K + KL + KK
Sbjct: 1017 TDMQKKAMTKLAGLQFSVQYKK 1038
Score = 53.9 bits (128), Expect(6) = 7e-96
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +1
Query: 388 LSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNV 567
+S TP W E+T+ Y D+ AQ ++ F K G++ ++L +G +
Sbjct: 1060 ISATTPVWLQEITNSYELDTHAQSLLAELAVSSPNEQGFELKNGLIYKNNRLVVGQNVGL 1119
Query: 568 IQTLLEYLHALTIGGHFGIQATFVRARSHLL 660
L+ HA +GGH GIQAT+ R + L
Sbjct: 1120 QTKLISAFHASPLGGHSGIQATYQRVKKLFL 1150
Score = 31.6 bits (70), Expect(6) = 7e-96
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 305 LYYDIQYKKGVDNVVADALSR 367
L + +QYKKG +N ADALSR
Sbjct: 1030 LQFSVQYKKGAENKAADALSR 1050
Score = 60.8 bits (146), Expect = 9e-06
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +3
Query: 9 DIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFL 134
D KT FKTH GH++F+VM FGLT+APATFQ LMN +F+ +
Sbjct: 745 DEMKTAFKTHHGHFQFRVMPFGLTNAPATFQCLMNAVFQQLM 786
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 116 bits (290), Expect(6) = 7e-96
Identities = 59/133 (44%), Positives = 82/133 (61%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D+VYLK+ PYR + L + KL +K+ GP V++++G+VAYKL LP+ +IH VFHVSQ
Sbjct: 1176 DMVYLKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIGSVAYKLLLPASSQIHPVFHVSQ 1235
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LKKH G P P LP+ D G IL P +L+ R I Q V Q +QW N AT
Sbjct: 1236 LKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAAT 1295
Query: 1768 WDDHQSSLPEIYP 1806
W+D + + +++P
Sbjct: 1296 WED-AAFISKVFP 1307
Score = 115 bits (288), Expect(6) = 7e-96
Identities = 56/132 (42%), Positives = 73/132 (55%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W+D+F G L+ S+ +HPQTDGQ ERVN CLE YLRC+ KP KW A A+WWYN
Sbjct: 1039 WKDVFEKAGVKLHFSSAYHPQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYAKWWYN 1098
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
+SFH +L M+P+QAL+G PP L + + AQ R
Sbjct: 1099 TSFHTTLGMTPYQALHGVPPPLLAESFLSPSLFTDARNKAEAKSVITAAIKSSLLKAQAR 1158
Query: 1364 MKLYADKSRKDR 1399
MK +AD +R +R
Sbjct: 1159 MKHFADMNRTER 1170
Score = 88.6 bits (218), Expect(6) = 7e-96
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
+V +CQ+NKS+ + L + + + HI+MDFIEGLP S+ K VI VI DR T
Sbjct: 932 YVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFT 991
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYAHF++L HP+T K HGL + IVSDRD++FT
Sbjct: 992 KYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFT 1035
Score = 60.8 bits (146), Expect(6) = 7e-96
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCT 311
LSTY++E L ++ A+ +W+ Y G I+TD SLKY +Q+LT Q K LIKLL
Sbjct: 743 LSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRLTEGIQHKLLIKLLSYD 802
Query: 312 MTFSIKK 332
KK
Sbjct: 803 YKIEYKK 809
Score = 53.5 bits (127), Expect(6) = 7e-96
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +1
Query: 391 SLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNVI 570
++ P W E+ + YA D + + +T G+LRYK++LY+G ++
Sbjct: 832 TIIVPTWITEILASYATDPKCTALESQLRITPQGHPPYTLTSGILRYKNRLYVGAGTDLR 891
Query: 571 QTLLEYLHALTIGGHFGIQATFVRAR 648
L + H +GGH G +AT+ RA+
Sbjct: 892 AKLQQSFHDSALGGHSGERATYQRAK 917
Score = 31.6 bits (70), Expect(6) = 7e-96
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 311 YDIQYKKGVDNVVADALSRRP 373
Y I+YKKG +N ADALSR P
Sbjct: 803 YKIEYKKGKENKAADALSRIP 823
Score = 68.2 bits (165), Expect = 6e-08
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +3
Query: 9 DIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTY 143
DI+KT F TH+GH+E+ VM FGLT+APATFQALMN I P+L +
Sbjct: 516 DIYKTAFSTHMGHFEYLVMPFGLTNAPATFQALMNSILAPYLRKF 560
>emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa
Japonica Group]
Length = 1629
Score = 123 bits (308), Expect(6) = 8e-95
Identities = 59/136 (43%), Positives = 78/136 (57%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W LFR GT L +S+++HPQTDGQ ERVN CLET+LRC P +WS+W ALAE+WYN
Sbjct: 1309 WTTLFRLAGTQLRMSSSYHPQTDGQTERVNQCLETFLRCFVHACPSQWSRWLALAEYWYN 1368
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
+SFH +L +PF+ LYG+ P + +A + AQ R
Sbjct: 1369 TSFHSALGTTPFEVLYGHKPRYFGLSASAACRSDDLVEWLHEREKMQALIRDHLLRAQTR 1428
Query: 1364 MKLYADKSRKDRSFEI 1411
MK AD+ R +RSF +
Sbjct: 1429 MKQQADQHRSERSFAV 1444
Score = 106 bits (264), Expect(6) = 8e-95
Identities = 59/125 (47%), Positives = 73/125 (58%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D VYLKL P+ + V R N KLS +F GP V+ KVG VAY+L LPS IH V HVSQ
Sbjct: 1446 DWVYLKLQPFVQQSVVTRANRKLSFRFYGPFQVLDKVGTVAYRLDLPSSSLIHPVVHVSQ 1505
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LKK LPV+D V P +IL R IR+G +LV QI ++WT +P T
Sbjct: 1506 LKKALAPTEQVHSPLPVLDPTNATHVCPAQILDRRFIRKGSKLVEQIQVRWTGDAPAATT 1565
Query: 1768 WDDHQ 1782
W++ Q
Sbjct: 1566 WENPQ 1570
Score = 75.5 bits (184), Expect(6) = 8e-95
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
+V +CQ+ KS+ L + D + Q +++DF+EGLP S + ILV+ D+ +
Sbjct: 1202 YVQACSVCQQAKSEHVKYPGMLQPLPVPDHAWQIVSLDFVEGLPKSASFNCILVVVDKFS 1261
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KY+HF+ L HP++ +LHGL S++SDRD++FT
Sbjct: 1262 KYSHFVPLTHPFSALDVAEAYMQHIHRLHGLPQSLISDRDRIFT 1305
Score = 70.1 bits (170), Expect(6) = 8e-95
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +3
Query: 87 PATFQALMNDIFKPFLSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLT 266
P F + + P LSTYE+E L +++A+ WR YLQ ++F I+TDH+SL + +Q+LT
Sbjct: 996 PLAFLSRALGLRHPGLSTYEKESLAIMLAVDHWRPYLQHDEFFIRTDHRSLAFLTEQRLT 1055
Query: 267 TSFQQKWLIKLLDCTMTFSIKK 332
T +Q K L KLL KK
Sbjct: 1056 TPWQHKALTKLLGLRYKIIFKK 1077
Score = 55.1 bits (131), Expect(6) = 8e-95
Identities = 26/87 (29%), Positives = 46/87 (52%)
Frame = +1
Query: 388 LSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNV 567
LS+ P W ++ + Y++D A + F+ + GVL ++++L++G +V
Sbjct: 1101 LSVAVPEWINDIVAGYSSDPDACSKVQTLCINSGAVPNFSLRNGVLYFQNRLWVGHNVDV 1160
Query: 568 IQTLLEYLHALTIGGHFGIQATFVRAR 648
Q +L LH +GGH GIQ T+ R +
Sbjct: 1161 QQRILANLHTAAVGGHSGIQVTYQRVK 1187
Score = 32.7 bits (73), Expect(6) = 8e-95
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 305 LYYDIQYKKGVDNVVADALSRRP 373
L Y I +KKG+DN ADALSR P
Sbjct: 1069 LRYKIIFKKGIDNSAADALSRYP 1091
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 118 bits (296), Expect(6) = 8e-95
Identities = 57/136 (41%), Positives = 76/136 (55%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W+++F G L+ S+ +HPQTDGQ ERVN CLE YLRC+ KP KW AEWWYN
Sbjct: 594 WKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYN 653
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
++FH SL MSP+QAL+G PP L + + AQ R
Sbjct: 654 TTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVKAQAR 713
Query: 1364 MKLYADKSRKDRSFEI 1411
MK +AD+ R++R+ E+
Sbjct: 714 MKYFADQHRQERTLEV 729
Score = 111 bits (277), Expect(6) = 8e-95
Identities = 56/133 (42%), Positives = 81/133 (60%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D+VYLK+ PYR + L + KL +++ GP V++++G+VAYKL LP +IH VFHVSQ
Sbjct: 731 DMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQ 790
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LKKH G P LP++D EG+IL P +L R I + V Q + W N AT
Sbjct: 791 LKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAAT 850
Query: 1768 WDDHQSSLPEIYP 1806
W+D + + +++P
Sbjct: 851 WED-AAFITKVFP 862
Score = 92.4 bits (228), Expect(6) = 8e-95
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
FV +CQ+NK++ L L + + HITMDF+EGLP S K VI VI DR T
Sbjct: 487 FVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFT 546
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYAHF+ L HP+T KLHGL + IVSDRD++FT
Sbjct: 547 KYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFT 590
Score = 59.7 bits (143), Expect(6) = 8e-95
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCT 311
LSTY++E L ++ A+ +W+ Y G I+TD SLKY +Q++T Q K LIKLL
Sbjct: 299 LSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYD 358
Query: 312 MTFSIKK 332
KK
Sbjct: 359 YKIEYKK 365
Score = 50.8 bits (120), Expect(6) = 8e-95
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +1
Query: 391 SLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNVI 570
++ P W EV + Y+ D + + +T K G+LRYK + +G +
Sbjct: 387 TVIVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLR 446
Query: 571 QTLLEYLHALTIGGHFGIQATFVRAR 648
+ LL H +GGH G +AT+ R +
Sbjct: 447 EQLLVSFHDSALGGHSGERATYQRMK 472
Score = 30.0 bits (66), Expect(6) = 8e-95
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 311 YDIQYKKGVDNVVADALSR 367
Y I+YKKG +N ADALSR
Sbjct: 359 YKIEYKKGQENKAADALSR 377
Score = 66.6 bits (161), Expect = 2e-07
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +3
Query: 9 DIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTY 143
D+ KT F THLGH+E+ VM FGLT+APATFQALMN I P+L +
Sbjct: 72 DVHKTAFSTHLGHFEYLVMPFGLTNAPATFQALMNKILAPYLRKF 116
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 118 bits (296), Expect(6) = 8e-95
Identities = 57/136 (41%), Positives = 76/136 (55%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W+++F G L+ S+ +HPQTDGQ ERVN CLE YLRC+ KP KW AEWWYN
Sbjct: 373 WKEVFEKAGVKLHFSSAYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYN 432
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
++FH SL MSP+QAL+G PP L + + AQ R
Sbjct: 433 TTFHTSLGMSPYQALHGIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVKAQAR 492
Query: 1364 MKLYADKSRKDRSFEI 1411
MK +AD+ R++R+ E+
Sbjct: 493 MKYFADQHRQERTLEV 508
Score = 111 bits (277), Expect(6) = 8e-95
Identities = 56/133 (42%), Positives = 81/133 (60%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D+VYLK+ PYR + L + KL +++ GP V++++G+VAYKL LP +IH VFHVSQ
Sbjct: 510 DMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVSQ 569
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LKKH G P LP++D EG+IL P +L R I + V Q + W N AT
Sbjct: 570 LKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAAT 629
Query: 1768 WDDHQSSLPEIYP 1806
W+D + + +++P
Sbjct: 630 WED-AAFITKVFP 641
Score = 92.4 bits (228), Expect(6) = 8e-95
Identities = 49/104 (47%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
FV +CQ+NK++ L L + + HITMDF+EGLP S K VI VI DR T
Sbjct: 266 FVKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFT 325
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYAHF+ L HP+T KLHGL + IVSDRD++FT
Sbjct: 326 KYAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFT 369
Score = 59.7 bits (143), Expect(6) = 8e-95
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCT 311
LSTY++E L ++ A+ +W+ Y G I+TD SLKY +Q++T Q K LIKLL
Sbjct: 78 LSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYD 137
Query: 312 MTFSIKK 332
KK
Sbjct: 138 YKIEYKK 144
Score = 50.8 bits (120), Expect(6) = 8e-95
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +1
Query: 391 SLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNVI 570
++ P W EV + Y+ D + + +T K G+LRYK + +G +
Sbjct: 166 TVIVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLR 225
Query: 571 QTLLEYLHALTIGGHFGIQATFVRAR 648
+ LL H +GGH G +AT+ R +
Sbjct: 226 EQLLVSFHDSALGGHSGERATYQRMK 251
Score = 30.0 bits (66), Expect(6) = 8e-95
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 311 YDIQYKKGVDNVVADALSR 367
Y I+YKKG +N ADALSR
Sbjct: 138 YKIEYKKGQENKAADALSR 156
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 117 bits (294), Expect(6) = 5e-93
Identities = 57/137 (41%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W++ F G +L L++ +HPQ+DGQ E VN CLETYLRC+ +P WS+W ALAE+WYN
Sbjct: 1229 WREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYWYN 1288
Query: 1184 SSFHISLKMSPFQALYGYVPP-HLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQE 1360
+++H S +M+PF+ +YG VPP HL + + + AQ
Sbjct: 1289 TNYHSSSRMTPFEIVYGQVPPVHLPY-LPGESKVAVVARSLQEREDMLLFLKFHLMRAQH 1347
Query: 1361 RMKLYADKSRKDRSFEI 1411
RMK +AD+ R +R FEI
Sbjct: 1348 RMKQFADQHRTEREFEI 1364
Score = 99.4 bits (246), Expect(6) = 5e-93
Identities = 56/137 (40%), Positives = 81/137 (59%), Gaps = 7/137 (5%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D VY+KL PYR+ V +R N KLS K+ GP +I + G VAYKL LPS+ ++H VFHVSQ
Sbjct: 1366 DYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQ 1425
Query: 1588 LKKHTG----LGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSP 1755
LK G H PS V + +PEK+++ + + + + V ++L++W+N
Sbjct: 1426 LKVLVGNVSTTVHLPSVMQDVFEK------VPEKVVERKMVNRQGKAVTKVLVKWSNEPL 1479
Query: 1756 ENATWD---DHQSSLPE 1797
E ATW+ D Q + PE
Sbjct: 1480 EEATWEFLFDLQKTFPE 1496
Score = 84.0 bits (206), Expect(6) = 5e-93
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +3
Query: 711 CQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLTKYAHFLS 887
CQ+ KSD + L + D ++MDFIEGLPVS K+VI+V+ DRL+K AHF++
Sbjct: 1129 CQQCKSDPAASPGLLQPLPIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIA 1188
Query: 888 LQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
L HPY+ KLHG +SIVSDRD VFT
Sbjct: 1189 LSHPYSALTVAHAYLDNVFKLHGCPTSIVSDRDVVFT 1225
Score = 71.6 bits (174), Expect(6) = 5e-93
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLD 305
LS YE+E L VI A+ +WR YL + F IKTD +SLKY L+Q+L T QQ+WL KLL+
Sbjct: 932 LSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLE 989
Score = 50.4 bits (119), Expect(6) = 5e-93
Identities = 25/77 (32%), Positives = 39/77 (50%)
Frame = +1
Query: 418 EVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNVIQTLLEYLHA 597
++ + YANDSQ Q II F++ + +LR K K+ + N+ T+L +LH
Sbjct: 1031 DIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPANDNIKNTILLWLHG 1090
Query: 598 LTIGGHFGIQATFVRAR 648
+GGH G T R +
Sbjct: 1091 SGVGGHSGRDVTHQRVK 1107
Score = 33.5 bits (75), Expect(6) = 5e-93
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +2
Query: 311 YDIQYKKGVDNVVADALSR 367
Y+IQY++G +NVVADALSR
Sbjct: 992 YEIQYRQGKENVVADALSR 1010
Score = 72.8 bits (177), Expect = 2e-09
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Frame = +3
Query: 9 DIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLS----TYEEEFLVVIMAI 176
DI KT FKTH GH+E+ VM FGLT+APATFQ LMN IFKPFL + ++ LV ++
Sbjct: 705 DIQKTAFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSL 764
Query: 177 HRWRQYLQ 200
RQ+L+
Sbjct: 765 EEHRQHLK 772
>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1619
Score = 117 bits (293), Expect(6) = 6e-91
Identities = 56/136 (41%), Positives = 76/136 (55%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W LFR GT L +S+++HPQ+D Q ER+N CL+T+LRC P +WS+W ALAE+WYN
Sbjct: 1290 WTTLFRLAGTQLRMSSSYHPQSDRQTERMNQCLKTFLRCFVHASPSQWSRWLALAEYWYN 1349
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
+SFH SL +PF+ LYG+ P + +A S + AQ R
Sbjct: 1350 TSFHSSLGTTPFEVLYGHKPRYFGLTASAACSAPELSDWLHERDKMQTLIREHLLRAQMR 1409
Query: 1364 MKLYADKSRKDRSFEI 1411
MK AD +RSF +
Sbjct: 1410 MKHQADTKHSERSFAV 1425
Score = 94.7 bits (234), Expect(6) = 6e-91
Identities = 46/125 (36%), Positives = 72/125 (57%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D VY+KL P+ + V N KLS +F GP V+ KVG+VAY+L LP IH V HVSQ
Sbjct: 1427 DWVYMKLQPFVQQSVVTCTNRKLSFRFYGPFQVLAKVGSVAYRLDLPPSCLIHPVIHVSQ 1486
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
L K LP++D + +P++++ R++ +G ++V Q+L++W+ T
Sbjct: 1487 LNKAVAPSDQVHSKLPILDDADAVTPVPQQVIDRRSVHKGAKMVEQVLIRWSGPDSAVVT 1546
Query: 1768 WDDHQ 1782
W++ Q
Sbjct: 1547 WENLQ 1551
Score = 82.4 bits (202), Expect(6) = 6e-91
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
F+ H ICQ+ K + L + +QS Q +++DFIEGLP S+ + ILV+ D+ +
Sbjct: 1183 FIQHCTICQQAKGEHVKYPGMLQPLPVPEQSWQIVSLDFIEGLPRSSTFNCILVVVDKFS 1242
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYAHF++L HP+T +LHGL +I+SD+D++FT
Sbjct: 1243 KYAHFVALAHPFTTLEVAEAYMQHIHRLHGLPEAIISDQDRIFT 1286
Score = 66.6 bits (161), Expect(6) = 6e-91
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCT 311
LSTYE+E L +++AI WR YLQ +F+I+TDH+SL + +Q+LTT +Q K L KLL
Sbjct: 992 LSTYEKESLAIMLAIDHWRPYLQHAEFSIRTDHRSLAFLDEQRLTTPWQHKALTKLLGLQ 1051
Query: 312 MTFSIKK 332
KK
Sbjct: 1052 YKILYKK 1058
Score = 57.0 bits (136), Expect(6) = 6e-91
Identities = 32/93 (34%), Positives = 44/93 (47%)
Frame = +1
Query: 370 TIGYCFLSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYI 549
T+ LS+ P W EV YA DS + + FT K G+L +K K++I
Sbjct: 1076 TVVLSALSVCIPEWTQEVIEGYAQDSDSLSKVQTLCINNSAIPDFTLKNGLLYFKDKMWI 1135
Query: 550 GT*GNVIQTLLEYLHALTIGGHFGIQATFVRAR 648
G V + +L LH IGGH GI T+ R +
Sbjct: 1136 GNNPIVQRKILANLHTAAIGGHSGITMTYQRIK 1168
Score = 31.6 bits (70), Expect(6) = 6e-91
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2
Query: 305 LYYDIQYKKGVDNVVADALSRRP 373
L Y I YKKG +N ADALSR P
Sbjct: 1050 LQYKILYKKGSENSAADALSRYP 1072
>gb|AAG13430.1|AC051634_11 putative plant disease resistance polyprotein [Oryza sativa Japonica
Group]
Length = 921
Score = 110 bits (275), Expect(6) = 3e-89
Identities = 57/138 (41%), Positives = 70/138 (50%)
Frame = +2
Query: 998 RHWQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWW 1177
+ W LF T L +ST +HPQ DGQ ERVN CLE YLRC+ P KWS W LAE+W
Sbjct: 624 KFWTTLFATWDTQLQMSTAYHPQIDGQTERVNQCLEMYLRCMTQANPKKWSHWIHLAEFW 683
Query: 1178 YNSSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQ 1357
YN+++H SL SP +AL+G P + P + AQ
Sbjct: 684 YNTNYHTSLGCSPHKALFGVDPHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLTRAQ 743
Query: 1358 ERMKLYADKSRKDRSFEI 1411
RMK ADK R DR F +
Sbjct: 744 LRMKNKADKGRSDRVFAV 761
Score = 90.5 bits (223), Expect(6) = 3e-89
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 3/127 (2%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D V+LKL PY ++ V R KL+ KF GP +V++++G AY+L LP+ +H VFHVSQ
Sbjct: 763 DAVFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVFHVSQ 822
Query: 1588 LKKHTGLGHTP---SPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPE 1758
LK HTP S PVV V+PE IL+ R +++G Q+LL+W+ +
Sbjct: 823 LKAQVP-DHTPVYTSLPSPVVLDAAD--VVPEAILERRLVKRGNAAHVQVLLKWSLLPAD 879
Query: 1759 NATWDDH 1779
+ATW+D+
Sbjct: 880 HATWEDY 886
Score = 77.4 bits (189), Expect(6) = 3e-89
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
FV +CQ+ K + L + ++ Q I+MDFIEGLP S+ + ILV+ DR T
Sbjct: 519 FVKQCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFT 578
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYA+F+ L HP+T K HG+ SIVSDRD++FT
Sbjct: 579 KYANFIPLCHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFT 622
Score = 62.4 bits (150), Expect(6) = 3e-89
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCT 311
LS YE+EFL ++M + +WR YLQ F IKTDH+SL + + L T QQK + KL+
Sbjct: 330 LSIYEKEFLAIMMVVDKWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQ 389
Query: 312 MTFSIKK 332
+F K+
Sbjct: 390 YSFQYKR 396
Score = 61.6 bits (148), Expect(6) = 3e-89
Identities = 27/86 (31%), Positives = 48/86 (55%)
Frame = +1
Query: 379 YCFLSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT* 558
+C LS+ P W EV + Y D QAQ ++ ++ +G++R+++K++IG+
Sbjct: 415 FCALSVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSN 474
Query: 559 GNVIQTLLEYLHALTIGGHFGIQATF 636
+ L++ HA +GGH GI AT+
Sbjct: 475 AGLHTKLIQAFHASALGGHSGIAATY 500
Score = 41.6 bits (96), Expect(6) = 3e-89
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 305 LYYDIQYKKGVDNVVADALSRRPLDTASC 391
L Y QYK+GVDN+VADALSR P + C
Sbjct: 388 LQYSFQYKRGVDNIVADALSRMPSSSQFC 416
>gb|AAP54661.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 760
Score = 110 bits (275), Expect(6) = 3e-89
Identities = 57/138 (41%), Positives = 70/138 (50%)
Frame = +2
Query: 998 RHWQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWW 1177
+ W LF T L +ST +HPQ DGQ ERVN CLE YLRC+ P KWS W LAE+W
Sbjct: 463 KFWTTLFATWDTQLQMSTAYHPQIDGQTERVNQCLEMYLRCMTQANPKKWSHWIHLAEFW 522
Query: 1178 YNSSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQ 1357
YN+++H SL SP +AL+G P + P + AQ
Sbjct: 523 YNTNYHTSLGCSPHKALFGVDPHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLTRAQ 582
Query: 1358 ERMKLYADKSRKDRSFEI 1411
RMK ADK R DR F +
Sbjct: 583 LRMKNKADKGRSDRVFAV 600
Score = 90.5 bits (223), Expect(6) = 3e-89
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 3/127 (2%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D V+LKL PY ++ V R KL+ KF GP +V++++G AY+L LP+ +H VFHVSQ
Sbjct: 602 DAVFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVFHVSQ 661
Query: 1588 LKKHTGLGHTP---SPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPE 1758
LK HTP S PVV V+PE IL+ R +++G Q+LL+W+ +
Sbjct: 662 LKAQVP-DHTPVYTSLPSPVVLDAAD--VVPEAILERRLVKRGNAAHVQVLLKWSLLPAD 718
Query: 1759 NATWDDH 1779
+ATW+D+
Sbjct: 719 HATWEDY 725
Score = 77.4 bits (189), Expect(6) = 3e-89
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
FV +CQ+ K + L + ++ Q I+MDFIEGLP S+ + ILV+ DR T
Sbjct: 358 FVKQCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFT 417
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYA+F+ L HP+T K HG+ SIVSDRD++FT
Sbjct: 418 KYANFIPLCHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFT 461
Score = 62.4 bits (150), Expect(6) = 3e-89
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCT 311
LS YE+EFL ++M + +WR YLQ F IKTDH+SL + + L T QQK + KL+
Sbjct: 169 LSIYEKEFLAIMMVVDKWRCYLQRGPFIIKTDHKSLCHLDDEILGTELQQKAMTKLMGLQ 228
Query: 312 MTFSIKK 332
+F K+
Sbjct: 229 YSFQYKR 235
Score = 61.6 bits (148), Expect(6) = 3e-89
Identities = 27/86 (31%), Positives = 48/86 (55%)
Frame = +1
Query: 379 YCFLSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT* 558
+C LS+ P W EV + Y D QAQ ++ ++ +G++R+++K++IG+
Sbjct: 254 FCALSVVQPIWIQEVINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSN 313
Query: 559 GNVIQTLLEYLHALTIGGHFGIQATF 636
+ L++ HA +GGH GI AT+
Sbjct: 314 AGLHTKLIQAFHASALGGHSGIAATY 339
Score = 41.6 bits (96), Expect(6) = 3e-89
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 305 LYYDIQYKKGVDNVVADALSRRPLDTASC 391
L Y QYK+GVDN+VADALSR P + C
Sbjct: 227 LQYSFQYKRGVDNIVADALSRMPSSSQFC 255
>ref|XP_008671115.1| PREDICTED: uncharacterized protein LOC103648418 [Zea mays]
Length = 1853
Score = 132 bits (331), Expect(6) = 5e-89
Identities = 64/136 (47%), Positives = 78/136 (57%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W LF+ LGT LNLST +HPQTDGQ ERVN C+E YLRC +P KW W +LAE+WYN
Sbjct: 1332 WTQLFKILGTKLNLSTAYHPQTDGQSERVNQCVEMYLRCAVHAQPTKWKTWLSLAEFWYN 1391
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
+S+H SL SPF+ LYGY PP P + + AQ R
Sbjct: 1392 TSYHTSLACSPFKVLYGYDPPFAAAPSVPSDTAADVAQVLVERAQFTAMLREQLAAAQNR 1451
Query: 1364 MKLYADKSRKDRSFEI 1411
MKL AD+ R DR F++
Sbjct: 1452 MKLRADRLRTDRQFQV 1467
Score = 90.5 bits (223), Expect(6) = 5e-89
Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 1/134 (0%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D+V LKL PY + V R KL+ KF GP ++++VG VAY+L+LP+ ++H VFHVSQ
Sbjct: 1469 DMVLLKLQPYAQHSVVSRPCPKLAFKFFGPYKIVERVGAVAYRLELPASAQVHPVFHVSQ 1528
Query: 1588 LKKHTGLGHTP-SPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENA 1764
LK +TP +LP V P +IL R +++G R V Q+L++W+ +
Sbjct: 1529 LKPFIP-DYTPVFSNLPAYSDLSSRNVQPLEILDRRLVKKGNRAVPQVLIRWSLLPDDAT 1587
Query: 1765 TWDDHQSSLPEIYP 1806
TW+D+ + L + YP
Sbjct: 1588 TWEDY-NVLRQRYP 1600
Score = 87.8 bits (216), Expect(6) = 5e-89
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFNLFLIDQSC-QHITMDFIEGLPVSNKKSVILVIFDRLT 866
FV ICQ+ K + + + I Q Q ITMDFIE LP S ILV+ DR T
Sbjct: 1225 FVQQCQICQQAKGERVHPAGLLHPLPIPQGAWQDITMDFIEKLPQSGGCDTILVVVDRFT 1284
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYAHF++L+HP+T +LHGL SIVSDRDK+FT
Sbjct: 1285 KYAHFIALKHPFTASQVAQVILDQVVRLHGLPKSIVSDRDKIFT 1328
Score = 60.1 bits (144), Expect(6) = 5e-89
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +3
Query: 87 PATFQALMNDIFKPFLSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLT 266
P F + I LS YE+EF+ +IMA+ WR YLQ ++F I+TDH++L + Q L
Sbjct: 1021 PIAFLSKALGIKSQKLSIYEKEFIALIMAVDHWRHYLQRSEFEIRTDHKALSFLGSQDLH 1080
Query: 267 TSFQQKWLIKLL 302
+ Q+K + KL+
Sbjct: 1081 SELQRKAMAKLM 1092
Score = 43.5 bits (101), Expect(6) = 5e-89
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +1
Query: 403 PHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNVIQTLL 582
P W EVT+ Y D AQ ++ ++ +GV+R +++G + L+
Sbjct: 1129 PLWIQEVTNSYVTDPAAQSLLARLCVHNPDEHGYSLSQGVIRKGGLIWVGQNSALRTKLV 1188
Query: 583 EYLHALTIGGHFGIQATFVRAR 648
+H GGH G+ AT+ R +
Sbjct: 1189 AAVHDSAAGGHSGMHATYHRLK 1210
Score = 29.3 bits (64), Expect(6) = 5e-89
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 305 LYYDIQYKKGVDNVVADALSR 367
L + + YK+G DN VADALSR
Sbjct: 1094 LQFKVVYKQGKDNKVADALSR 1114
Score = 69.3 bits (168), Expect = 3e-08
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Frame = +3
Query: 15 FKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTYEEEFLVVIMAIH-RWRQ 191
FKT FKTH GHY+F+VM FGLT+APATFQ MN + PFL + F+ I+ W+
Sbjct: 811 FKTAFKTHQGHYQFRVMPFGLTNAPATFQCAMNLVLAPFLRKFVMVFIDDILVYSPNWQS 870
Query: 192 YLQGNK--FTIKTDHQSLKYFLQQK 260
+L+ + FT H K++L+++
Sbjct: 871 HLEHLRLVFTALRHH---KFYLKER 892
>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 937
Score = 110 bits (276), Expect(6) = 9e-88
Identities = 57/138 (41%), Positives = 70/138 (50%)
Frame = +2
Query: 998 RHWQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWW 1177
+ W LF T L +ST +HPQTDGQIERVN CLE YLRC+ P KWS W LAE+W
Sbjct: 640 KFWTTLFATWDTQLQMSTAYHPQTDGQIERVNQCLEMYLRCMTQANPKKWSHWIHLAEFW 699
Query: 1178 YNSSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQ 1357
YN+++H L SP +AL+G P + P + AQ
Sbjct: 700 YNTNYHTYLGCSPHKALFGVDPHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLTRAQ 759
Query: 1358 ERMKLYADKSRKDRSFEI 1411
RMK DK R DR F +
Sbjct: 760 LRMKNKVDKGRSDRVFAV 777
Score = 89.7 bits (221), Expect(6) = 9e-88
Identities = 51/128 (39%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D V+LKL PY ++ V R KL+ KF GP +V++++G AY+L LP+ +H VFHVSQ
Sbjct: 779 DAVFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVFHVSQ 838
Query: 1588 LK----KHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSP 1755
LK HT + +T P V+D V+PE IL+ R +++ Q+LL+W++
Sbjct: 839 LKAQVPDHTPV-YTSLPSQVVLDAAD---VVPEAILERRLVKRSNAAHVQVLLKWSSLPA 894
Query: 1756 ENATWDDH 1779
++ATW+D+
Sbjct: 895 DHATWEDY 902
Score = 79.0 bits (193), Expect(6) = 9e-88
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFN-LFLIDQSCQHITMDFIEGLPVSNKKSVILVIFDRLT 866
FV +CQ+ K + L + ++ Q I+MDFIEGLP S+ + ILV+ DR T
Sbjct: 535 FVKQCQVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFT 594
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KYA+F+ L+HP+T K HG+ SIVSDRD++FT
Sbjct: 595 KYANFIPLRHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFT 638
Score = 60.1 bits (144), Expect(6) = 9e-88
Identities = 26/90 (28%), Positives = 49/90 (54%)
Frame = +1
Query: 379 YCFLSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT* 558
+C S+ P W E+ + Y D QAQ ++ ++ +G++R+++K++IG+
Sbjct: 431 FCAFSVVQPIWIQEMINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGIIRFQNKIWIGSN 490
Query: 559 GNVIQTLLEYLHALTIGGHFGIQATFVRAR 648
+ L++ HA +GGH GI AT+ R +
Sbjct: 491 AGLHTKLIQAFHASALGGHSGIAATYHRIK 520
Score = 59.3 bits (142), Expect(6) = 9e-88
Identities = 30/67 (44%), Positives = 41/67 (61%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLLDCT 311
LS YE+EFL ++MA+ +WR YLQ F IKT H+ L + Q L T QQK + KL+
Sbjct: 346 LSIYEKEFLAIMMAVDKWRCYLQRGPFIIKTYHKILCHLDDQILGTELQQKAMTKLMGLQ 405
Query: 312 MTFSIKK 332
+F K+
Sbjct: 406 YSFQYKR 412
Score = 40.0 bits (92), Expect(6) = 9e-88
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 305 LYYDIQYKKGVDNVVADALSRRPLDTASCHY 397
L Y QYK+GV+N+VADALSR P + C +
Sbjct: 404 LQYSFQYKRGVNNIVADALSRMPSSSQFCAF 434
Score = 61.6 bits (148), Expect = 5e-06
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +3
Query: 3 ELDIFKTTFKTHLGHYEFKVMSFGLTDAPATFQALMNDIFKPFLSTYEEEFLVVIM 170
E D KT FKTH G ++F+VM FGLT+AP+TFQ LMN + PF+ +F++V M
Sbjct: 117 ETDEAKTAFKTHHGQFQFRVMPFGLTNAPSTFQCLMNSVLAPFI----RKFVLVFM 168
>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 124 bits (310), Expect(5) = 2e-86
Identities = 55/136 (40%), Positives = 80/136 (58%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
WQ LF+ GT+L++S+++HPQ+DGQ ER+N CLET+LRC P +WS W ++AE+WYN
Sbjct: 1270 WQQLFQITGTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAEYWYN 1329
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPITATTSDYATETYXXXXXXXXXXXXXXXXXAQER 1363
++ H +L +PF+ LYG+ P H + ET+ AQ+R
Sbjct: 1330 TTVHSTLGRTPFEVLYGHTPRHFGILVDTVVPQPELETWLKERELMTKVIKLHLHRAQDR 1389
Query: 1364 MKLYADKSRKDRSFEI 1411
MK ADK R +R F +
Sbjct: 1390 MKRQADKQRSERVFSV 1405
Score = 102 bits (253), Expect(5) = 2e-86
Identities = 56/123 (45%), Positives = 76/123 (61%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D VYLKL PY ++ V+ R N KLS KF GP + ++G+VAY+L LP+ IH +FHVSQ
Sbjct: 1407 DWVYLKLQPYIQSSVATRSNHKLSFKFFGPFQITDRLGSVAYRLALPASSSIHPIFHVSQ 1466
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LK+ G SP LP G I V P +ILQ R I +G L+ Q+ + W+ + + AT
Sbjct: 1467 LKRVIGRDQRASPQLP--QDVGPIQV-PTRILQRRFIDRGGELIAQVKVVWSGMTEDLAT 1523
Query: 1768 WDD 1776
W+D
Sbjct: 1524 WED 1526
Score = 77.0 bits (188), Expect(5) = 2e-86
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFNLFLIDQSCQH-ITMDFIEGLPVSNKKSVILVIFDRLT 866
+V +CQ++K D + H I++DFIEGLP S + ILV+ D+ +
Sbjct: 1163 YVQSCTVCQQSKPDRAKYPGLLQPLEVPPQAWHTISLDFIEGLPRSAHYNCILVVVDKFS 1222
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
KY HFL L HP+T KLHGL +I+SDRD++FT
Sbjct: 1223 KYGHFLPLLHPFTAAKVARVFLDNVYKLHGLPVNIISDRDRIFT 1266
Score = 60.5 bits (145), Expect(5) = 2e-86
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKL 299
LSTYE+E++ +I+AI +WR YLQ +F I TDH+SL +Q+L T +QQK KL
Sbjct: 973 LSTYEKEYMAIILAIAQWRSYLQLAEFIIYTDHRSLAQLNEQRLHTIWQQKMYTKL 1028
Score = 50.8 bits (120), Expect(5) = 2e-86
Identities = 22/89 (24%), Positives = 45/89 (50%)
Frame = +1
Query: 382 CFLSLYTPHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*G 561
C +S P W EV Y D ++ ++ F+ +G++R+K+++++G
Sbjct: 1060 CAISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGGNL 1119
Query: 562 NVIQTLLEYLHALTIGGHFGIQATFVRAR 648
+ Q +L+ +H +GGH G AT+ + +
Sbjct: 1120 QLQQKVLQAMHDTAVGGHSGAPATYHKVK 1148
>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 1923
Score = 105 bits (261), Expect(6) = 7e-86
Identities = 55/143 (38%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Frame = +2
Query: 1004 WQDLFRALGTSLNLSTTFHPQTDGQIERVNGCLETYLRCLNGHKPGKWSQWFALAEWWYN 1183
W+ LF G +L+LS+ +HPQ+DGQ +RVN CLE +LRC P KW W LA +WYN
Sbjct: 705 WEFLFLKSGIALHLSSAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLHLAGYWYN 764
Query: 1184 SSFHISLKMSPFQALYGYVPPHLDFPI-TATTSDYATETYXXXXXXXXXXXXXXXXXAQE 1360
+ FH +L +PF+ LYG+ P L + T D A + Q+
Sbjct: 765 TCFHSALNKTPFEVLYGHNPLQLGVTMETCAIPDLA--VWLHERKLMAELLQQHLHRVQQ 822
Query: 1361 RMKLYADKSRKDRSFEI--WYIL 1423
+MK +ADK+R R F + W L
Sbjct: 823 KMKFHADKNRSFREFAVGDWVFL 845
Score = 104 bits (259), Expect(6) = 7e-86
Identities = 64/147 (43%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
Frame = +1
Query: 1408 DLVYLKL*PYREAFVSLRKNFKLSAKFNGPLSVIQKVGNVAYKLQLPSHVRIHLVFHVSQ 1587
D V+LKL PY + V+ R KL+ KF GP ++ +VG VAYKLQLP IH VFHVSQ
Sbjct: 841 DWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILARVGTVAYKLQLPDDSTIHPVFHVSQ 900
Query: 1588 LKKHTGLGHTPSPDLPVVDHEGQILVLPEKILQTRTIRQGRRLVRQILLQWTNSSPENAT 1767
LK G H LP + V P +IL R IR+G R V Q+L+ W++S E+AT
Sbjct: 901 LKVAHGFKHQVQSRLPKF---LKSTVYPLQILDQRLIRKGNRTVSQVLVYWSDSVAEDAT 957
Query: 1768 WDDH---QSSLPEIYP*GQG*CSGEAM 1839
W+D Q P GQ GE +
Sbjct: 958 WEDREDLQQRFPMALAWGQATFQGEGV 984
Score = 75.5 bits (184), Expect(6) = 7e-86
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +3
Query: 690 FVSHYDICQRNKSDSTNAQKYFNLFLIDQSC-QHITMDFIEGLPVSNKKSVILVIFDRLT 866
+V + ICQ+ K D I + Q +++DFIEGLP S + + ILV+ D+ +
Sbjct: 598 WVKNCTICQQAKPDLAKYPGLLQPLPIPEGAWQVVSLDFIEGLPKSERYNCILVVVDKFS 657
Query: 867 KYAHFLSLQHPYTXXXXXXXXXXXXXKLHGLSSSIVSDRDKVFT 998
+YAHF+ L HP++ KLHG+ ++SDRDK+FT
Sbjct: 658 RYAHFVPLSHPFSALDVAVSYMKNIYKLHGMPKVLISDRDKIFT 701
Score = 60.8 bits (146), Expect(6) = 7e-86
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +3
Query: 132 LSTYEEEFLVVIMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKLTTSFQQKWLIKLL 302
LSTYE+E+L +++A+ +WR YLQ ++F I TDH +L + Q+L T Q K KL+
Sbjct: 407 LSTYEKEYLAILLAVDQWRSYLQHDEFVILTDHHNLMHITDQRLHTPLQHKAFTKLM 463
Score = 56.2 bits (134), Expect(6) = 7e-86
Identities = 30/83 (36%), Positives = 41/83 (49%)
Frame = +1
Query: 403 PHWAAEVTSDYANDSQAQHIIXXXXXXXXXXXXFTYKEGVLRYKHKLYIGT*GNVIQTLL 582
P W V Y D QAQ ++ F +GVLRYK K++IG ++ Q L+
Sbjct: 502 PLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLV 561
Query: 583 EYLHALTIGGHFGIQATFVRARS 651
LHA IGGH G T+ R ++
Sbjct: 562 TALHASPIGGHSGFPVTYQRVKA 584
Score = 30.4 bits (67), Expect(6) = 7e-86
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 305 LYYDIQYKKGVDNVVADALSRRPLDT 382
L Y + Y++G N ADALSRR +T
Sbjct: 465 LQYKVCYRRGTSNAAADALSRRDEET 490
Score = 62.0 bits (149), Expect = 4e-06
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Frame = +3
Query: 18 KTTFKTHLGHYEFKVMSFGLTDAPATFQALMND----IFKPFLSTYEEEFLVV------- 164
KT F+TH GHYE++VMSFGLT APATFQ MND + + F + ++ L+
Sbjct: 182 KTAFQTHSGHYEYRVMSFGLTGAPATFQKAMNDTLATVLRKFTLVFFDDILIYSPDLPSH 241
Query: 165 IMAIHRWRQYLQGNKFTIKTDHQSLKYFLQQKL 263
I + + Q LQ ++ +K S F QQ+L
Sbjct: 242 IQHLEQVLQLLQAQQWKVKLSKCS---FAQQQL 271