BLASTX nr result

ID: Papaver30_contig00007271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver30_contig00007271
         (553 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010242492.1| PREDICTED: DNA-directed RNA polymerase II su...   325   7e-87
ref|XP_010934577.1| PREDICTED: DNA-directed RNA polymerase II su...   315   1e-83
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su...   314   2e-83
ref|XP_010940915.1| PREDICTED: DNA-directed RNA polymerase II su...   314   2e-83
ref|XP_009388799.1| PREDICTED: DNA-directed RNA polymerase II su...   314   2e-83
ref|XP_011089805.1| PREDICTED: DNA-directed RNA polymerase II su...   313   4e-83
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]    313   4e-83
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar...   313   4e-83
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su...   312   6e-83
ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group] g...   312   6e-83
ref|XP_008809800.1| PREDICTED: DNA-directed RNA polymerase II su...   312   8e-83
ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II su...   312   8e-83
gb|KQL15582.1| hypothetical protein SETIT_022890mg [Setaria ital...   310   2e-82
ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polype...   310   2e-82
ref|XP_008227149.1| PREDICTED: DNA-directed RNA polymerase II su...   310   4e-82
ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Th...   309   5e-82
gb|AFK39298.1| unknown [Lotus japonicus]                              309   5e-82
gb|AKF43220.1| DNA-directed RNA polymerase II non-catalytic subu...   308   8e-82
ref|XP_012064758.1| PREDICTED: DNA-directed RNA polymerase II su...   308   8e-82
ref|XP_009596971.1| PREDICTED: DNA-directed RNA polymerase II su...   308   8e-82

>ref|XP_010242492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
           nucifera] gi|720082116|ref|XP_010242493.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
           nucifera] gi|720082119|ref|XP_010242494.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB7 [Nelumbo
           nucifera]
          Length = 177

 Score =  325 bits (834), Expect = 7e-87
 Identities = 159/161 (98%), Positives = 161/161 (100%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDN+GKGLIRDGTGFVTFPVKYQCVV
Sbjct: 17  HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNIGKGLIRDGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 71
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 177


>ref|XP_010934577.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Elaeis
           guineensis]
          Length = 177

 Score =  315 bits (806), Expect = 1e-83
 Identities = 153/161 (95%), Positives = 159/161 (98%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAIT V+++GKGLIR+GTGFVTFPVKYQCV 
Sbjct: 17  HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITNVEDIGKGLIREGTGFVTFPVKYQCVA 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 71
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 177


>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7
           [Brachypodium distachyon] gi|944070871|gb|KQK06355.1|
           hypothetical protein BRADI_2g25940 [Brachypodium
           distachyon]
          Length = 177

 Score =  314 bits (805), Expect = 2e-83
 Identities = 152/160 (95%), Positives = 160/160 (100%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAITGV+++GKGLIR+GTGFVTFPVKYQCVV
Sbjct: 17  HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 137 QKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176


>ref|XP_010940915.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like isoform
           X2 [Elaeis guineensis]
          Length = 177

 Score =  314 bits (804), Expect = 2e-83
 Identities = 152/161 (94%), Positives = 160/161 (99%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAIT V+++GKGLIR+GTGFVTFPVKYQCVV
Sbjct: 17  HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITNVEDIGKGLIREGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 71
           QKDSEVRLKIIGTRVDATEIFCIGTI+DDFLGVINDPGAA+
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIRDDFLGVINDPGAAS 177


>ref|XP_009388799.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 177

 Score =  314 bits (804), Expect = 2e-83
 Identities = 153/161 (95%), Positives = 160/161 (99%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAITGV+++GKGLIR+GTGFVTFPVKYQ VV
Sbjct: 17  HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTFPVKYQAVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 71
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGA+A
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGASA 177


>ref|XP_011089805.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Sesamum
           indicum] gi|747084765|ref|XP_011089806.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB7 [Sesamum
           indicum] gi|747085755|ref|XP_011090351.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB7 [Sesamum
           indicum] gi|747085757|ref|XP_011090352.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB7 [Sesamum
           indicum] gi|747085759|ref|XP_011090354.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB7 [Sesamum
           indicum] gi|747085761|ref|XP_011090355.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB7 [Sesamum
           indicum]
          Length = 177

 Score =  313 bits (801), Expect = 4e-83
 Identities = 152/161 (94%), Positives = 159/161 (98%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFG +LRDKLVAKLMKDVEGTCSGRHGF+VAITG+++VGKGLIRDGTGFVTFPVKYQCVV
Sbjct: 17  HFGRDLRDKLVAKLMKDVEGTCSGRHGFIVAITGIESVGKGLIRDGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 71
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGA +
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGATS 177


>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  313 bits (801), Expect = 4e-83
 Identities = 151/160 (94%), Positives = 159/160 (99%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAITGV+++GKGLIR+GTGFVTFPVKYQCVV
Sbjct: 76  HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTFPVKYQCVV 135

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 136 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKI 195

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 196 QKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGGA 235


>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|475564192|gb|EMT14471.1|
           DNA-directed RNA polymerase II subunit RPB7 [Aegilops
           tauschii]
          Length = 177

 Score =  313 bits (801), Expect = 4e-83
 Identities = 151/160 (94%), Positives = 159/160 (99%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLVAKLMKDVEGTCSGRHGFVVAITGV+++GKGLIR+GTGFVTFPVKYQCVV
Sbjct: 17  HFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 137 QKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGGA 176


>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Cucumis
           sativus] gi|778702031|ref|XP_011655124.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB7 [Cucumis
           sativus] gi|778702034|ref|XP_011655125.1| PREDICTED:
           DNA-directed RNA polymerase II subunit RPB7 [Cucumis
           sativus] gi|700195707|gb|KGN50884.1| hypothetical
           protein Csa_5G312340 [Cucumis sativus]
          Length = 176

 Score =  312 bits (800), Expect = 6e-83
 Identities = 151/160 (94%), Positives = 157/160 (98%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++N+GKGLIRDGTGFVTFPVKYQCVV
Sbjct: 17  HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIRDGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP AA
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSAA 176


>ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
           gi|50878367|gb|AAT85142.1| putative RNA polymerase II
           subunit 5 [Oryza sativa Japonica Group]
           gi|113579034|dbj|BAF17397.1| Os05g0400700 [Oryza sativa
           Japonica Group] gi|125552268|gb|EAY97977.1| hypothetical
           protein OsI_19896 [Oryza sativa Indica Group]
           gi|215704281|dbj|BAG93121.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218196761|gb|EEC79188.1| hypothetical protein
           OsI_19893 [Oryza sativa Indica Group]
           gi|222631528|gb|EEE63660.1| hypothetical protein
           OsJ_18478 [Oryza sativa Japonica Group]
           gi|937918996|dbj|BAS93914.1| Os05g0400700 [Oryza sativa
           Japonica Group]
          Length = 177

 Score =  312 bits (800), Expect = 6e-83
 Identities = 151/160 (94%), Positives = 160/160 (100%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLV+KL+KDVEGTCSGRHGFVVAITGV++VGKGLIR+GTG+VTFPVKYQCVV
Sbjct: 17  HFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDVGKGLIREGTGYVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176


>ref|XP_008809800.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Phoenix
           dactylifera]
          Length = 177

 Score =  312 bits (799), Expect = 8e-83
 Identities = 151/161 (93%), Positives = 159/161 (98%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LR+KLVAKLMKDVEGTCSGRHGFVVAIT V+++GKGLIR+GTGFVTFPVKYQCV 
Sbjct: 17  HFGPHLREKLVAKLMKDVEGTCSGRHGFVVAITNVEDIGKGLIREGTGFVTFPVKYQCVA 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 71
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA+
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAS 177


>ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Oryza
           brachyantha]
          Length = 177

 Score =  312 bits (799), Expect = 8e-83
 Identities = 150/160 (93%), Positives = 160/160 (100%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLV+KL+KDVEGTCSGRHGFVVAITGV+++GKGLIR+GTG+VTFPVKYQCVV
Sbjct: 17  HFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGYVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176


>gb|KQL15582.1| hypothetical protein SETIT_022890mg [Setaria italica]
          Length = 283

 Score =  310 bits (795), Expect = 2e-82
 Identities = 149/160 (93%), Positives = 160/160 (100%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLV+KL+KDVEGTCSGRHGFVVAITGV+++GKGLIR+GTG+VTFPVKYQCVV
Sbjct: 123 HFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGYVTFPVKYQCVV 182

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 183 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKI 242

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 243 QKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 282


>ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Zea mays]
           gi|242056199|ref|XP_002457245.1| hypothetical protein
           SORBIDRAFT_03g003990 [Sorghum bicolor]
           gi|242090461|ref|XP_002441063.1| hypothetical protein
           SORBIDRAFT_09g019690 [Sorghum bicolor]
           gi|514750630|ref|XP_004962151.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB7 [Setaria italica]
           gi|194708012|gb|ACF88090.1| unknown [Zea mays]
           gi|195628342|gb|ACG36001.1| DNA-directed RNA polymerase
           II 19 kDa polypeptide [Zea mays]
           gi|241929220|gb|EES02365.1| hypothetical protein
           SORBIDRAFT_03g003990 [Sorghum bicolor]
           gi|241946348|gb|EES19493.1| hypothetical protein
           SORBIDRAFT_09g019690 [Sorghum bicolor]
           gi|413945277|gb|AFW77926.1| DNA-directed RNA polymerase
           II polypeptide [Zea mays]
          Length = 177

 Score =  310 bits (795), Expect = 2e-82
 Identities = 149/160 (93%), Positives = 160/160 (100%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFGP+LRDKLV+KL+KDVEGTCSGRHGFVVAITGV+++GKGLIR+GTG+VTFPVKYQCVV
Sbjct: 17  HFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIREGTGYVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 137 QKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176


>ref|XP_008227149.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Prunus
           mume]
          Length = 176

 Score =  310 bits (793), Expect = 4e-82
 Identities = 150/160 (93%), Positives = 156/160 (97%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFG NLR+ LVAKLMKDVEGTCSG+HGFVVAITG++N+GKGLIRDGTGFVTFPVKYQCVV
Sbjct: 17  HFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIRDGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP  A
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA 176


>ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Theobroma cacao]
           gi|508786660|gb|EOY33916.1| DNA-directed RNA polymerase
           II isoform 1 [Theobroma cacao]
          Length = 176

 Score =  309 bits (792), Expect = 5e-82
 Identities = 150/160 (93%), Positives = 156/160 (97%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFG NLR+ LV+KLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTGFVTFPVKYQCVV
Sbjct: 17  HFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGE+LEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP  A
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTA 176


>gb|AFK39298.1| unknown [Lotus japonicus]
          Length = 176

 Score =  309 bits (792), Expect = 5e-82
 Identities = 151/159 (94%), Positives = 156/159 (98%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           +FG NLRD LVAKLMKDVEGTCSGRHGFVVA+TG++NVGKGLIRDGTGFVTFPVKYQCVV
Sbjct: 17  YFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIRDGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGA 77
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP A
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVA 175


>gb|AKF43220.1| DNA-directed RNA polymerase II non-catalytic subunit [Erodium
           trifolium]
          Length = 176

 Score =  308 bits (790), Expect = 8e-82
 Identities = 151/160 (94%), Positives = 155/160 (96%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFG NLR+ LVAKLMKDVEGTCSGRHGFVVAITG++NVGKGLIRDGTGFVTFPVKYQCVV
Sbjct: 17  HFGRNLRENLVAKLMKDVEGTCSGRHGFVVAITGIENVGKGLIRDGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSD SVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDSSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP  A
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTGA 176


>ref|XP_012064758.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Jatropha
           curcas]
          Length = 176

 Score =  308 bits (790), Expect = 8e-82
 Identities = 150/160 (93%), Positives = 156/160 (97%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           +FG NLRD LV+KLMKDVEGTCSGRHGFVVAITG++N+GKGLIRDGTGFVTFPVKYQCVV
Sbjct: 17  YFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIRDGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 74
           QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP  A
Sbjct: 137 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTGA 176


>ref|XP_009596971.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nicotiana
           tomentosiformis] gi|698471484|ref|XP_009784043.1|
           PREDICTED: DNA-directed RNA polymerase II subunit RPB7
           [Nicotiana sylvestris]
          Length = 177

 Score =  308 bits (790), Expect = 8e-82
 Identities = 149/161 (92%), Positives = 159/161 (98%)
 Frame = -1

Query: 553 HFGPNLRDKLVAKLMKDVEGTCSGRHGFVVAITGVDNVGKGLIRDGTGFVTFPVKYQCVV 374
           HFG +LR+KLV+KLMKDVEGTCSGRHGF+VAITG+++VGKGLIRDGTGFVTFPVKYQCVV
Sbjct: 17  HFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIRDGTGFVTFPVKYQCVV 76

Query: 373 FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDIPNYTTSDGSVKI 194
           FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGD+PNYTTSDGSVKI
Sbjct: 77  FRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDGSVKI 136

Query: 193 QKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 71
           QK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGA A
Sbjct: 137 QKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGANA 177


Top